Query psy6114
Match_columns 66
No_of_seqs 143 out of 1099
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 17:57:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6114.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6114hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.4 1.6E-12 3.5E-17 76.5 5.0 45 5-49 2-46 (265)
2 COG4221 Short-chain alcohol de 99.2 2.2E-11 4.7E-16 70.9 3.4 48 6-53 3-50 (246)
3 KOG0725|consensus 99.2 1.2E-10 2.7E-15 68.7 5.9 45 3-47 2-46 (270)
4 PRK05854 short chain dehydroge 99.1 1.1E-10 2.4E-15 69.6 5.3 43 4-46 9-51 (313)
5 PRK08278 short chain dehydroge 99.1 6.7E-10 1.4E-14 65.0 8.1 41 6-46 3-43 (273)
6 PRK08339 short chain dehydroge 99.1 1.5E-10 3.3E-15 67.4 5.2 42 5-46 4-45 (263)
7 PRK08085 gluconate 5-dehydroge 99.1 1.9E-10 4.2E-15 66.3 5.5 45 1-45 1-45 (254)
8 PRK08303 short chain dehydroge 99.1 7.6E-10 1.6E-14 66.0 8.2 41 4-44 3-43 (305)
9 KOG1205|consensus 99.1 1.4E-10 3E-15 68.9 4.7 45 4-48 7-51 (282)
10 PRK07062 short chain dehydroge 99.1 2.7E-10 5.9E-15 66.0 5.8 43 4-46 3-45 (265)
11 PRK07576 short chain dehydroge 99.1 2.6E-10 5.5E-15 66.4 5.4 45 1-45 1-45 (264)
12 PRK07478 short chain dehydroge 99.1 2.6E-10 5.7E-15 65.7 5.4 41 6-46 3-43 (254)
13 PRK08277 D-mannonate oxidoredu 99.1 2.7E-10 5.8E-15 66.5 5.4 44 2-45 3-46 (278)
14 PRK05867 short chain dehydroge 99.1 3.5E-10 7.6E-15 65.2 5.5 43 4-46 4-46 (253)
15 PRK08862 short chain dehydroge 99.1 4E-10 8.7E-15 64.7 5.3 42 6-47 2-43 (227)
16 PRK05876 short chain dehydroge 99.1 4.1E-10 8.9E-15 66.1 5.1 42 5-46 2-43 (275)
17 PRK07109 short chain dehydroge 99.1 5E-10 1.1E-14 67.4 5.5 43 4-46 3-45 (334)
18 COG3967 DltE Short-chain dehyd 99.1 3.3E-10 7.2E-15 65.0 4.4 42 6-47 2-43 (245)
19 KOG1014|consensus 99.0 2.7E-10 5.8E-15 68.2 4.1 42 8-49 48-89 (312)
20 PRK06398 aldose dehydrogenase; 99.0 2.7E-09 5.9E-14 61.9 8.2 40 6-45 3-42 (258)
21 PRK06139 short chain dehydroge 99.0 4.7E-10 1E-14 67.6 5.2 43 5-47 3-45 (330)
22 PRK07063 short chain dehydroge 99.0 5.5E-10 1.2E-14 64.5 5.3 42 5-46 3-44 (260)
23 PRK05872 short chain dehydroge 99.0 4.5E-10 9.8E-15 66.4 5.0 45 1-45 1-45 (296)
24 PRK07035 short chain dehydroge 99.0 6.9E-10 1.5E-14 63.8 5.5 42 4-45 3-44 (252)
25 PRK07533 enoyl-(acyl carrier p 99.0 7.3E-10 1.6E-14 64.3 5.3 44 1-44 2-47 (258)
26 PRK06197 short chain dehydroge 99.0 6.1E-10 1.3E-14 65.9 5.0 42 4-45 11-52 (306)
27 PRK07523 gluconate 5-dehydroge 99.0 7.6E-10 1.7E-14 63.8 5.3 41 5-45 6-46 (255)
28 KOG1201|consensus 99.0 1.1E-09 2.4E-14 65.3 6.0 43 5-47 34-76 (300)
29 PRK08589 short chain dehydroge 99.0 9.6E-10 2.1E-14 64.2 5.7 37 6-42 3-39 (272)
30 PRK06523 short chain dehydroge 99.0 1E-09 2.2E-14 63.4 5.7 44 1-44 1-44 (260)
31 PRK06949 short chain dehydroge 99.0 1E-09 2.2E-14 63.2 5.5 46 1-46 1-46 (258)
32 PRK06194 hypothetical protein; 99.0 1.2E-09 2.5E-14 64.0 5.7 40 6-45 3-42 (287)
33 KOG1208|consensus 99.0 7.7E-10 1.7E-14 66.6 5.0 44 4-47 30-73 (314)
34 PLN02780 ketoreductase/ oxidor 99.0 5.5E-10 1.2E-14 67.0 4.3 40 8-47 52-91 (320)
35 PRK08703 short chain dehydroge 99.0 1.4E-09 3.1E-14 62.1 5.8 41 5-45 2-42 (239)
36 PRK06196 oxidoreductase; Provi 99.0 9.5E-10 2.1E-14 65.5 4.7 41 5-45 22-62 (315)
37 PRK13394 3-hydroxybutyrate deh 99.0 1.9E-09 4.1E-14 62.1 5.8 41 6-46 4-44 (262)
38 PRK08265 short chain dehydroge 99.0 1.3E-09 2.9E-14 63.2 5.2 41 5-45 2-42 (261)
39 PRK06171 sorbitol-6-phosphate 99.0 2.9E-09 6.2E-14 61.7 6.2 45 1-45 1-45 (266)
40 PRK05866 short chain dehydroge 99.0 1.9E-09 4.1E-14 63.8 5.4 42 5-46 36-77 (293)
41 PLN02730 enoyl-[acyl-carrier-p 98.9 3.7E-09 8E-14 63.3 6.3 44 4-48 4-49 (303)
42 PRK07791 short chain dehydroge 98.9 3.5E-09 7.5E-14 62.5 6.0 38 6-43 3-40 (286)
43 PRK06172 short chain dehydroge 98.9 2.8E-09 6.1E-14 61.3 5.5 41 5-45 3-43 (253)
44 PRK06114 short chain dehydroge 98.9 6.7E-09 1.4E-13 60.0 7.0 41 4-44 3-43 (254)
45 PRK06935 2-deoxy-D-gluconate 3 98.9 4.9E-09 1.1E-13 60.6 6.2 39 4-42 10-48 (258)
46 PRK07097 gluconate 5-dehydroge 98.9 3.7E-09 8.1E-14 61.4 5.7 43 4-46 5-47 (265)
47 PRK07890 short chain dehydroge 98.9 2.8E-09 6.1E-14 61.3 5.1 39 7-45 3-41 (258)
48 PRK07774 short chain dehydroge 98.9 3.7E-09 8E-14 60.6 5.6 41 5-45 2-42 (250)
49 PRK06200 2,3-dihydroxy-2,3-dih 98.9 2.2E-09 4.9E-14 62.2 4.7 40 6-45 3-42 (263)
50 PRK07814 short chain dehydroge 98.9 3.4E-09 7.4E-14 61.5 5.4 41 5-45 6-46 (263)
51 PRK05717 oxidoreductase; Valid 98.9 3.8E-09 8.2E-14 61.0 5.5 42 3-44 4-45 (255)
52 TIGR03325 BphB_TodD cis-2,3-di 98.9 1.4E-09 2.9E-14 63.1 3.5 39 6-44 2-40 (262)
53 PRK06124 gluconate 5-dehydroge 98.9 4.1E-09 8.8E-14 60.8 5.4 41 5-45 7-47 (256)
54 PRK07453 protochlorophyllide o 98.9 2.8E-09 6.1E-14 63.6 4.8 41 5-45 2-42 (322)
55 PRK07060 short chain dehydroge 98.9 1.8E-09 3.8E-14 61.7 3.8 45 1-45 1-45 (245)
56 PRK06603 enoyl-(acyl carrier p 98.9 6E-09 1.3E-13 60.6 6.0 39 4-42 3-43 (260)
57 PRK12481 2-deoxy-D-gluconate 3 98.9 5.2E-09 1.1E-13 60.5 5.6 39 5-43 4-42 (251)
58 PRK07984 enoyl-(acyl carrier p 98.9 7.5E-09 1.6E-13 60.5 6.2 36 7-42 4-41 (262)
59 PRK06125 short chain dehydroge 98.9 4.7E-09 1E-13 60.7 5.3 42 6-47 4-45 (259)
60 PRK08416 7-alpha-hydroxysteroi 98.9 5.6E-09 1.2E-13 60.5 5.6 39 4-42 3-41 (260)
61 PRK07856 short chain dehydroge 98.9 4.8E-09 1E-13 60.5 5.3 40 5-44 2-41 (252)
62 PRK08594 enoyl-(acyl carrier p 98.9 6.1E-09 1.3E-13 60.6 5.7 39 5-43 3-43 (257)
63 PRK06720 hypothetical protein; 98.9 7E-09 1.5E-13 57.6 5.7 40 6-45 13-52 (169)
64 PRK07792 fabG 3-ketoacyl-(acyl 98.9 1E-08 2.3E-13 61.0 6.8 40 4-43 7-46 (306)
65 PRK07825 short chain dehydroge 98.9 3.3E-09 7.1E-14 61.8 4.5 40 6-45 2-41 (273)
66 PRK07666 fabG 3-ketoacyl-(acyl 98.9 5.8E-09 1.3E-13 59.6 5.4 41 5-45 3-43 (239)
67 PRK06113 7-alpha-hydroxysteroi 98.9 7.2E-09 1.6E-13 59.8 5.8 41 5-45 7-47 (255)
68 PRK12828 short chain dehydroge 98.9 8.1E-09 1.8E-13 58.6 5.7 40 6-45 4-43 (239)
69 PRK12429 3-hydroxybutyrate deh 98.9 6.6E-09 1.4E-13 59.7 5.4 40 7-46 2-41 (258)
70 PRK06079 enoyl-(acyl carrier p 98.9 6.9E-09 1.5E-13 60.1 5.5 37 6-42 4-42 (252)
71 PRK07067 sorbitol dehydrogenas 98.9 5.1E-09 1.1E-13 60.4 4.8 40 6-45 3-42 (257)
72 PRK12823 benD 1,6-dihydroxycyc 98.9 8.1E-09 1.8E-13 59.6 5.6 40 4-43 3-42 (260)
73 PRK12939 short chain dehydroge 98.9 8.2E-09 1.8E-13 59.0 5.5 41 5-45 3-43 (250)
74 PRK09186 flagellin modificatio 98.9 8.6E-09 1.9E-13 59.3 5.5 39 7-45 2-40 (256)
75 PRK07904 short chain dehydroge 98.9 1.2E-08 2.5E-13 59.3 5.9 38 8-45 7-45 (253)
76 PRK12826 3-ketoacyl-(acyl-carr 98.9 8.4E-09 1.8E-13 59.0 5.2 39 6-44 3-41 (251)
77 PLN02253 xanthoxin dehydrogena 98.8 6.7E-09 1.5E-13 60.6 4.8 40 5-44 14-53 (280)
78 PRK06505 enoyl-(acyl carrier p 98.8 5E-09 1.1E-13 61.4 4.3 37 7-43 5-43 (271)
79 PRK08628 short chain dehydroge 98.8 9.8E-09 2.1E-13 59.2 5.3 41 5-45 3-43 (258)
80 PRK09242 tropinone reductase; 98.8 7.8E-09 1.7E-13 59.7 4.8 41 5-45 5-45 (257)
81 PRK07231 fabG 3-ketoacyl-(acyl 98.8 9.5E-09 2E-13 58.8 5.0 41 6-46 2-42 (251)
82 PRK07806 short chain dehydroge 98.8 2.5E-08 5.4E-13 57.2 6.7 39 6-44 3-41 (248)
83 PRK08415 enoyl-(acyl carrier p 98.8 1.8E-08 3.8E-13 59.3 6.2 38 6-43 2-41 (274)
84 PRK08945 putative oxoacyl-(acy 98.8 1.1E-08 2.3E-13 58.8 5.2 40 6-45 9-48 (247)
85 PRK06057 short chain dehydroge 98.8 8.5E-09 1.8E-13 59.5 4.7 41 5-45 3-43 (255)
86 PRK09072 short chain dehydroge 98.8 8.3E-09 1.8E-13 59.8 4.5 40 6-45 2-41 (263)
87 PRK05653 fabG 3-ketoacyl-(acyl 98.8 1.7E-08 3.8E-13 57.3 5.8 40 6-45 2-41 (246)
88 PRK12367 short chain dehydroge 98.8 9.5E-09 2.1E-13 59.7 4.7 38 6-43 11-48 (245)
89 PRK08643 acetoin reductase; Va 98.8 1.4E-08 3.1E-13 58.5 5.3 37 9-45 2-38 (256)
90 TIGR01832 kduD 2-deoxy-D-gluco 98.8 1.6E-08 3.4E-13 58.0 5.4 38 6-43 2-39 (248)
91 PRK06138 short chain dehydroge 98.8 1.1E-08 2.5E-13 58.6 4.8 40 6-45 2-41 (252)
92 TIGR02632 RhaD_aldol-ADH rhamn 98.8 1.3E-08 2.9E-13 66.2 5.5 42 4-45 409-450 (676)
93 PRK08213 gluconate 5-dehydroge 98.8 1.3E-08 2.8E-13 58.8 4.9 41 5-45 8-48 (259)
94 PRK07985 oxidoreductase; Provi 98.8 2.1E-08 4.6E-13 59.4 5.8 38 6-43 46-83 (294)
95 PRK07370 enoyl-(acyl carrier p 98.8 4.4E-08 9.6E-13 57.0 7.0 39 6-44 3-43 (258)
96 PRK07677 short chain dehydroge 98.8 1.5E-08 3.3E-13 58.4 5.0 38 9-46 1-38 (252)
97 PRK06841 short chain dehydroge 98.8 1.7E-08 3.8E-13 58.0 5.1 40 5-44 11-50 (255)
98 PRK08340 glucose-1-dehydrogena 98.8 1.2E-08 2.6E-13 59.1 4.5 35 11-45 2-36 (259)
99 PRK08690 enoyl-(acyl carrier p 98.8 2.5E-08 5.4E-13 58.1 5.8 37 6-42 3-41 (261)
100 PRK08217 fabG 3-ketoacyl-(acyl 98.8 1.9E-08 4.2E-13 57.5 5.2 40 6-45 2-41 (253)
101 PRK06179 short chain dehydroge 98.8 7E-08 1.5E-12 56.1 7.6 38 8-45 3-40 (270)
102 PRK06500 short chain dehydroge 98.8 1.4E-08 3E-13 58.1 4.6 39 6-44 3-41 (249)
103 PRK07889 enoyl-(acyl carrier p 98.8 2.2E-08 4.8E-13 58.1 5.4 39 5-43 3-43 (256)
104 PRK06914 short chain dehydroge 98.8 2.1E-08 4.5E-13 58.5 5.2 38 8-45 2-39 (280)
105 PRK08936 glucose-1-dehydrogena 98.8 4E-08 8.7E-13 56.9 6.3 39 5-43 3-41 (261)
106 PRK05599 hypothetical protein; 98.8 1.7E-08 3.7E-13 58.3 4.5 37 10-47 1-37 (246)
107 PRK07326 short chain dehydroge 98.8 2E-08 4.4E-13 57.2 4.8 39 7-45 4-42 (237)
108 PRK08226 short chain dehydroge 98.8 3.1E-08 6.6E-13 57.3 5.6 39 5-43 2-40 (263)
109 PRK12747 short chain dehydroge 98.8 2.1E-08 4.5E-13 57.7 4.8 35 7-41 2-36 (252)
110 PRK07102 short chain dehydroge 98.8 1.9E-08 4E-13 57.7 4.5 37 10-46 2-38 (243)
111 PRK05786 fabG 3-ketoacyl-(acyl 98.7 2.6E-08 5.5E-13 56.8 5.0 40 6-45 2-41 (238)
112 TIGR03206 benzo_BadH 2-hydroxy 98.7 2.4E-08 5.2E-13 57.2 4.9 39 7-45 1-39 (250)
113 PRK08264 short chain dehydroge 98.7 2.9E-08 6.2E-13 56.6 5.1 42 5-46 2-44 (238)
114 PRK08159 enoyl-(acyl carrier p 98.7 4.6E-08 1E-12 57.4 6.1 38 5-42 6-45 (272)
115 PRK06300 enoyl-(acyl carrier p 98.7 4E-08 8.6E-13 58.8 5.8 39 4-42 3-43 (299)
116 PRK06550 fabG 3-ketoacyl-(acyl 98.7 3.8E-08 8.3E-13 56.0 5.6 39 6-44 2-40 (235)
117 PRK12384 sorbitol-6-phosphate 98.7 3.1E-08 6.8E-13 57.2 5.2 38 9-46 2-39 (259)
118 PRK07831 short chain dehydroge 98.7 3.4E-08 7.3E-13 57.2 5.3 41 6-46 14-55 (262)
119 PRK05875 short chain dehydroge 98.7 3.3E-08 7.1E-13 57.6 5.3 40 6-45 4-43 (276)
120 PRK06701 short chain dehydroge 98.7 7E-08 1.5E-12 57.1 6.7 40 5-44 42-81 (290)
121 PRK07201 short chain dehydroge 98.7 2.5E-08 5.5E-13 64.0 5.1 41 6-46 368-408 (657)
122 PRK12744 short chain dehydroge 98.7 1E-07 2.2E-12 55.1 7.1 40 4-43 3-42 (257)
123 PRK08063 enoyl-(acyl carrier p 98.7 3E-08 6.5E-13 56.8 4.8 38 7-44 2-40 (250)
124 PRK08251 short chain dehydroge 98.7 2.8E-08 6.1E-13 57.0 4.6 37 9-45 2-38 (248)
125 PRK06128 oxidoreductase; Provi 98.7 5.1E-08 1.1E-12 57.8 5.8 38 6-43 52-89 (300)
126 PRK07024 short chain dehydroge 98.7 1.7E-08 3.7E-13 58.4 3.7 37 9-45 2-38 (257)
127 PRK05855 short chain dehydroge 98.7 3.6E-08 7.8E-13 62.0 5.3 41 6-46 312-352 (582)
128 PRK08220 2,3-dihydroxybenzoate 98.7 5.7E-08 1.2E-12 55.7 5.7 39 5-43 4-42 (252)
129 PF00106 adh_short: short chai 98.7 1.2E-07 2.6E-12 51.5 6.7 33 10-42 1-34 (167)
130 PRK06483 dihydromonapterin red 98.7 4.3E-08 9.4E-13 56.0 5.2 37 9-45 2-38 (236)
131 TIGR01289 LPOR light-dependent 98.7 2.8E-08 6.1E-13 59.4 4.5 37 9-45 3-40 (314)
132 PRK12742 oxidoreductase; Provi 98.7 5.5E-08 1.2E-12 55.4 5.6 37 6-42 3-39 (237)
133 PRK08993 2-deoxy-D-gluconate 3 98.7 6E-08 1.3E-12 56.1 5.7 38 5-42 6-43 (253)
134 PLN00198 anthocyanidin reducta 98.7 6.6E-08 1.4E-12 57.9 6.1 44 1-44 1-44 (338)
135 PRK06198 short chain dehydroge 98.7 4.7E-08 1E-12 56.4 5.2 41 5-45 2-43 (260)
136 PRK06463 fabG 3-ketoacyl-(acyl 98.7 6.3E-08 1.4E-12 55.9 5.7 39 5-43 3-41 (255)
137 PRK12829 short chain dehydroge 98.7 4E-08 8.6E-13 56.7 4.7 41 5-45 7-47 (264)
138 PRK07454 short chain dehydroge 98.7 5.4E-08 1.2E-12 55.7 5.1 38 8-45 5-42 (241)
139 PRK12746 short chain dehydroge 98.7 5.4E-08 1.2E-12 56.0 5.1 38 6-43 3-41 (254)
140 PRK06182 short chain dehydroge 98.7 4.3E-08 9.4E-13 57.1 4.7 38 8-45 2-39 (273)
141 PRK06484 short chain dehydroge 98.7 2.1E-08 4.6E-13 62.9 3.6 39 7-45 267-305 (520)
142 PRK12936 3-ketoacyl-(acyl-carr 98.7 5E-08 1.1E-12 55.7 4.9 39 6-44 3-41 (245)
143 PRK07832 short chain dehydroge 98.7 4.3E-08 9.3E-13 57.2 4.6 36 10-45 1-36 (272)
144 PRK06484 short chain dehydroge 98.7 4.5E-08 9.7E-13 61.5 4.8 40 7-46 3-42 (520)
145 PRK05650 short chain dehydroge 98.7 5.8E-08 1.2E-12 56.5 4.9 36 10-45 1-36 (270)
146 PRK06180 short chain dehydroge 98.7 5.6E-08 1.2E-12 56.9 4.9 37 8-44 3-39 (277)
147 PRK12859 3-ketoacyl-(acyl-carr 98.7 3.5E-07 7.6E-12 53.0 8.1 38 5-42 2-41 (256)
148 PRK07424 bifunctional sterol d 98.7 6.4E-08 1.4E-12 60.1 5.2 41 5-45 174-214 (406)
149 KOG1200|consensus 98.7 3.4E-08 7.5E-13 56.7 3.6 41 7-47 12-52 (256)
150 PRK12743 oxidoreductase; Provi 98.7 1.1E-07 2.4E-12 55.0 5.8 35 9-43 2-36 (256)
151 PRK09135 pteridine reductase; 98.7 1E-07 2.2E-12 54.4 5.6 37 7-43 4-40 (249)
152 PRK05565 fabG 3-ketoacyl-(acyl 98.7 9.1E-08 2E-12 54.6 5.4 40 6-45 2-42 (247)
153 PRK05993 short chain dehydroge 98.7 5.4E-08 1.2E-12 57.0 4.5 37 9-45 4-40 (277)
154 COG1028 FabG Dehydrogenases wi 98.6 1E-07 2.2E-12 54.7 5.5 40 6-45 2-41 (251)
155 PRK07577 short chain dehydroge 98.6 1.1E-07 2.4E-12 54.0 5.6 38 8-45 2-39 (234)
156 PRK12935 acetoacetyl-CoA reduc 98.6 1.5E-07 3.2E-12 53.9 6.1 37 6-42 3-39 (247)
157 KOG1502|consensus 98.6 1.1E-07 2.3E-12 57.7 5.6 38 8-45 5-42 (327)
158 PRK07775 short chain dehydroge 98.6 1.1E-07 2.3E-12 55.7 5.4 38 7-44 8-45 (274)
159 PRK08642 fabG 3-ketoacyl-(acyl 98.6 1.3E-07 2.8E-12 54.3 5.6 37 6-42 2-38 (253)
160 PLN02653 GDP-mannose 4,6-dehyd 98.6 1.2E-07 2.6E-12 56.9 5.6 40 5-44 2-41 (340)
161 PRK06181 short chain dehydroge 98.6 8.4E-08 1.8E-12 55.5 4.7 37 9-45 1-37 (263)
162 KOG1209|consensus 98.6 1.9E-07 4.1E-12 54.4 5.9 42 8-49 6-48 (289)
163 PRK09291 short chain dehydroge 98.6 9E-08 1.9E-12 55.1 4.6 37 9-45 2-38 (257)
164 TIGR01963 PHB_DH 3-hydroxybuty 98.6 9.1E-08 2E-12 54.9 4.5 37 9-45 1-37 (255)
165 PRK12827 short chain dehydroge 98.6 3.1E-07 6.8E-12 52.4 6.7 37 7-43 4-40 (249)
166 PRK12938 acetyacetyl-CoA reduc 98.6 1.2E-07 2.5E-12 54.4 4.9 34 7-40 1-34 (246)
167 PRK09134 short chain dehydroge 98.6 2.8E-07 6E-12 53.3 6.4 37 6-42 6-42 (258)
168 PRK08267 short chain dehydroge 98.6 4.9E-08 1.1E-12 56.4 3.2 36 10-45 2-37 (260)
169 PRK05557 fabG 3-ketoacyl-(acyl 98.6 1.9E-07 4.1E-12 53.1 5.5 39 6-44 2-40 (248)
170 PRK12937 short chain dehydroge 98.6 1.7E-07 3.6E-12 53.6 5.3 38 6-43 2-39 (245)
171 PRK07074 short chain dehydroge 98.6 1.1E-07 2.3E-12 54.9 4.5 37 9-45 2-38 (257)
172 PRK06997 enoyl-(acyl carrier p 98.6 2.7E-07 5.8E-12 53.8 6.2 37 6-42 3-41 (260)
173 PRK06101 short chain dehydroge 98.6 1.5E-07 3.3E-12 54.0 5.1 36 10-45 2-37 (240)
174 PRK08263 short chain dehydroge 98.6 1.4E-07 3.1E-12 55.1 4.8 38 8-45 2-39 (275)
175 PRK08324 short chain dehydroge 98.6 1.4E-07 3E-12 61.5 5.1 41 5-45 418-458 (681)
176 PRK06077 fabG 3-ketoacyl-(acyl 98.6 2.5E-07 5.5E-12 53.0 5.6 37 6-42 3-39 (252)
177 PRK06924 short chain dehydroge 98.6 1.9E-07 4E-12 53.7 5.0 34 10-43 2-35 (251)
178 PLN02583 cinnamoyl-CoA reducta 98.6 2.6E-07 5.6E-12 54.8 5.7 38 6-43 3-40 (297)
179 PRK08177 short chain dehydroge 98.6 2.2E-07 4.7E-12 52.9 5.2 37 10-46 2-38 (225)
180 TIGR01500 sepiapter_red sepiap 98.6 1.5E-07 3.2E-12 54.5 4.4 36 11-46 2-41 (256)
181 TIGR02622 CDP_4_6_dhtase CDP-g 98.6 3E-07 6.4E-12 55.5 5.9 39 7-45 2-40 (349)
182 PLN03209 translocon at the inn 98.5 2E-07 4.3E-12 60.0 5.3 42 6-47 77-118 (576)
183 PRK12745 3-ketoacyl-(acyl-carr 98.5 4.5E-07 9.8E-12 52.1 6.2 35 9-43 2-36 (256)
184 TIGR02415 23BDH acetoin reduct 98.5 2E-07 4.4E-12 53.5 4.7 35 10-44 1-35 (254)
185 TIGR02685 pter_reduc_Leis pter 98.5 3.3E-07 7.1E-12 53.4 5.4 33 10-42 2-34 (267)
186 PRK12748 3-ketoacyl-(acyl-carr 98.5 3E-07 6.6E-12 53.1 5.2 37 6-42 2-40 (256)
187 PRK05693 short chain dehydroge 98.5 3.1E-07 6.6E-12 53.6 5.0 35 10-44 2-36 (274)
188 PLN02989 cinnamyl-alcohol dehy 98.5 3.5E-07 7.7E-12 54.5 5.4 39 8-46 4-42 (325)
189 PRK10538 malonic semialdehyde 98.5 2.1E-07 4.5E-12 53.6 4.1 36 10-45 1-36 (248)
190 PRK07023 short chain dehydroge 98.5 3.5E-07 7.5E-12 52.4 5.0 34 11-44 3-36 (243)
191 PLN02986 cinnamyl-alcohol dehy 98.5 5.8E-07 1.3E-11 53.5 6.0 40 7-46 3-42 (322)
192 PRK12825 fabG 3-ketoacyl-(acyl 98.5 5.1E-07 1.1E-11 51.3 5.5 37 7-43 4-40 (249)
193 PLN02572 UDP-sulfoquinovose sy 98.5 4.5E-07 9.8E-12 56.7 5.6 37 5-41 43-79 (442)
194 PRK08017 oxidoreductase; Provi 98.5 2.2E-07 4.8E-12 53.4 3.9 37 10-46 3-39 (256)
195 PLN02686 cinnamoyl-CoA reducta 98.5 5.8E-07 1.3E-11 54.9 5.7 39 5-43 49-87 (367)
196 PRK07069 short chain dehydroge 98.5 5.3E-07 1.2E-11 51.7 5.1 31 12-42 2-32 (251)
197 PRK05884 short chain dehydroge 98.5 2.4E-07 5.3E-12 52.9 3.6 35 11-45 2-36 (223)
198 KOG1207|consensus 98.5 2.7E-07 5.8E-12 52.4 3.6 43 5-47 3-45 (245)
199 PRK06940 short chain dehydroge 98.5 4E-07 8.8E-12 53.4 4.5 36 9-46 2-37 (275)
200 PLN02662 cinnamyl-alcohol dehy 98.5 5.6E-07 1.2E-11 53.4 5.2 38 8-45 3-40 (322)
201 PRK06953 short chain dehydroge 98.4 3.4E-07 7.3E-12 52.0 3.7 36 10-45 2-37 (222)
202 TIGR01472 gmd GDP-mannose 4,6- 98.4 7.3E-07 1.6E-11 53.6 5.2 35 10-44 1-35 (343)
203 KOG1199|consensus 98.4 8.3E-07 1.8E-11 50.4 5.0 47 1-47 1-47 (260)
204 PRK06482 short chain dehydroge 98.4 8.6E-07 1.9E-11 51.7 5.2 36 9-44 2-37 (276)
205 PRK06123 short chain dehydroge 98.4 7.4E-07 1.6E-11 51.0 4.7 34 9-42 2-35 (248)
206 TIGR01829 AcAcCoA_reduct aceto 98.4 9.2E-07 2E-11 50.4 4.7 32 10-41 1-32 (242)
207 PRK09730 putative NAD(P)-bindi 98.4 9.4E-07 2E-11 50.5 4.6 34 10-43 2-36 (247)
208 PLN02240 UDP-glucose 4-epimera 98.4 1.7E-06 3.7E-11 51.9 5.9 38 6-43 2-39 (352)
209 PLN02650 dihydroflavonol-4-red 98.4 1.2E-06 2.5E-11 52.9 5.0 39 8-46 4-42 (351)
210 PRK06947 glucose-1-dehydrogena 98.4 1.7E-06 3.8E-11 49.6 5.6 33 9-41 2-34 (248)
211 PRK12824 acetoacetyl-CoA reduc 98.3 1.5E-06 3.2E-11 49.6 5.1 34 10-43 3-36 (245)
212 PLN02214 cinnamoyl-CoA reducta 98.3 1.5E-06 3.3E-11 52.5 5.3 39 7-45 8-46 (342)
213 TIGR03589 PseB UDP-N-acetylglu 98.3 1.2E-06 2.6E-11 52.6 4.8 38 7-44 2-41 (324)
214 PLN00015 protochlorophyllide r 98.3 5E-07 1.1E-11 53.8 2.9 33 13-45 1-34 (308)
215 PLN02896 cinnamyl-alcohol dehy 98.3 1.8E-06 3.9E-11 52.2 5.2 38 7-44 8-45 (353)
216 PRK08261 fabG 3-ketoacyl-(acyl 98.3 2.3E-06 5.1E-11 53.2 5.8 37 6-42 207-243 (450)
217 TIGR01831 fabG_rel 3-oxoacyl-( 98.3 1.7E-06 3.6E-11 49.4 4.7 32 12-43 1-32 (239)
218 PLN00141 Tic62-NAD(P)-related 98.3 1.5E-06 3.3E-11 50.3 4.6 39 7-45 15-53 (251)
219 cd01078 NAD_bind_H4MPT_DH NADP 98.3 2E-06 4.3E-11 48.4 4.7 42 6-47 25-66 (194)
220 PRK15181 Vi polysaccharide bio 98.3 2.9E-06 6.3E-11 51.3 5.6 39 6-44 12-50 (348)
221 PLN02657 3,8-divinyl protochlo 98.3 3.3E-06 7.2E-11 52.1 5.7 39 7-45 58-96 (390)
222 PRK07041 short chain dehydroge 98.3 9.2E-07 2E-11 50.2 2.9 33 13-45 1-33 (230)
223 smart00822 PKS_KR This enzymat 98.2 8.6E-06 1.9E-10 43.8 6.3 37 10-46 1-38 (180)
224 KOG1610|consensus 98.2 5.9E-06 1.3E-10 50.0 6.0 42 5-46 25-66 (322)
225 PLN02778 3,5-epimerase/4-reduc 98.2 8.3E-06 1.8E-10 48.6 6.6 39 3-41 3-41 (298)
226 PRK08219 short chain dehydroge 98.2 3.7E-06 8.1E-11 47.4 4.9 36 9-45 3-38 (227)
227 COG1086 Predicted nucleoside-d 98.2 4.1E-06 9E-11 54.0 5.2 42 6-47 247-289 (588)
228 KOG4169|consensus 98.2 4.2E-06 9.1E-11 49.0 4.5 40 6-45 2-41 (261)
229 TIGR01830 3oxo_ACP_reduc 3-oxo 98.2 4.3E-06 9.3E-11 47.5 4.5 32 12-43 1-32 (239)
230 PLN02427 UDP-apiose/xylose syn 98.2 5.8E-06 1.3E-10 50.6 5.2 39 6-44 11-50 (386)
231 TIGR03466 HpnA hopanoid-associ 98.2 5.7E-06 1.2E-10 49.0 4.9 35 11-45 2-36 (328)
232 PRK12548 shikimate 5-dehydroge 98.2 6.4E-06 1.4E-10 49.2 5.0 37 6-43 123-160 (289)
233 CHL00194 ycf39 Ycf39; Provisio 98.1 5.2E-06 1.1E-10 49.6 4.5 35 11-45 2-36 (317)
234 KOG1478|consensus 98.1 5.5E-06 1.2E-10 49.4 4.4 39 9-47 3-46 (341)
235 TIGR01777 yfcH conserved hypot 98.1 5.8E-06 1.3E-10 48.2 4.5 36 12-47 1-36 (292)
236 PRK05579 bifunctional phosphop 98.1 9.4E-06 2E-10 50.5 5.3 39 5-43 184-238 (399)
237 PLN02695 GDP-D-mannose-3',5'-e 98.1 9.6E-06 2.1E-10 49.6 5.3 36 8-43 20-55 (370)
238 PRK07578 short chain dehydroge 98.1 9.9E-06 2.1E-10 45.3 4.9 33 11-44 2-34 (199)
239 PF13460 NAD_binding_10: NADH( 98.1 9.2E-06 2E-10 44.8 4.4 34 12-45 1-34 (183)
240 PLN02206 UDP-glucuronate decar 98.1 1.1E-05 2.4E-10 50.7 5.1 35 8-42 118-152 (442)
241 TIGR03649 ergot_EASG ergot alk 98.1 1.1E-05 2.3E-10 47.4 4.8 34 12-45 2-35 (285)
242 COG0451 WcaG Nucleoside-diphos 98.1 1.5E-05 3.2E-10 46.9 5.3 35 12-46 3-37 (314)
243 PRK09009 C factor cell-cell si 98.1 1.4E-05 3.1E-10 45.5 5.0 34 10-43 1-36 (235)
244 PLN02166 dTDP-glucose 4,6-dehy 98.0 1.5E-05 3.3E-10 49.9 5.3 36 8-43 119-154 (436)
245 PRK10675 UDP-galactose-4-epime 98.0 2.5E-05 5.4E-10 46.7 5.3 32 11-42 2-33 (338)
246 PF02719 Polysacc_synt_2: Poly 97.9 5.4E-06 1.2E-10 49.8 1.9 36 12-47 1-37 (293)
247 PF13561 adh_short_C2: Enoyl-( 97.9 6.5E-06 1.4E-10 47.3 2.2 28 18-45 5-32 (241)
248 PF08659 KR: KR domain; Inter 97.9 7.2E-05 1.6E-09 41.8 6.2 33 11-43 2-35 (181)
249 PRK02472 murD UDP-N-acetylmura 97.9 6.1E-05 1.3E-09 46.9 6.5 39 6-45 2-40 (447)
250 KOG1210|consensus 97.9 1.6E-05 3.5E-10 48.2 3.6 38 10-47 34-71 (331)
251 PRK08125 bifunctional UDP-gluc 97.9 3.1E-05 6.8E-10 50.6 5.1 37 8-44 314-351 (660)
252 COG0702 Predicted nucleoside-d 97.9 1.9E-05 4.1E-10 45.7 3.7 37 11-47 2-38 (275)
253 PRK11150 rfaD ADP-L-glycero-D- 97.9 3.6E-05 7.8E-10 45.6 4.8 32 12-43 2-33 (308)
254 COG1087 GalE UDP-glucose 4-epi 97.9 3.5E-05 7.7E-10 46.7 4.7 36 10-45 1-36 (329)
255 TIGR01746 Thioester-redct thio 97.9 3E-05 6.6E-10 46.3 4.4 34 11-44 1-36 (367)
256 PRK13656 trans-2-enoyl-CoA red 97.9 3.9E-05 8.4E-10 47.9 4.9 34 8-42 40-75 (398)
257 PF01488 Shikimate_DH: Shikima 97.9 2.7E-05 5.8E-10 41.8 3.6 42 5-47 8-50 (135)
258 PLN00016 RNA-binding protein; 97.8 4.1E-05 8.8E-10 46.9 4.5 37 9-45 52-92 (378)
259 PRK10217 dTDP-glucose 4,6-dehy 97.8 5.3E-05 1.2E-09 45.7 4.9 33 10-42 2-35 (355)
260 TIGR00521 coaBC_dfp phosphopan 97.8 6.9E-05 1.5E-09 46.7 5.3 39 5-43 181-235 (390)
261 TIGR02813 omega_3_PfaA polyket 97.8 4.9E-05 1.1E-09 55.8 5.1 35 8-42 1996-2031(2582)
262 PF01370 Epimerase: NAD depend 97.8 7.6E-05 1.7E-09 42.3 5.0 34 12-45 1-34 (236)
263 PRK11908 NAD-dependent epimera 97.8 6.5E-05 1.4E-09 45.3 4.9 34 10-43 2-36 (347)
264 KOG1371|consensus 97.8 4.1E-05 9E-10 46.7 3.9 37 9-45 2-38 (343)
265 PRK08309 short chain dehydroge 97.8 8.6E-05 1.9E-09 41.7 5.0 34 11-45 2-35 (177)
266 PRK09620 hypothetical protein; 97.8 9.6E-05 2.1E-09 43.1 5.3 36 7-42 1-52 (229)
267 TIGR01214 rmlD dTDP-4-dehydror 97.8 5.5E-05 1.2E-09 44.3 4.3 34 12-45 2-35 (287)
268 PRK14106 murD UDP-N-acetylmura 97.8 8.6E-05 1.9E-09 46.3 5.4 37 6-43 2-38 (450)
269 PRK00258 aroE shikimate 5-dehy 97.8 3.2E-05 6.9E-10 45.9 3.2 43 6-49 120-163 (278)
270 PRK14982 acyl-ACP reductase; P 97.7 4.5E-05 9.7E-10 46.8 3.5 43 6-48 152-196 (340)
271 TIGR01179 galE UDP-glucose-4-e 97.7 9.4E-05 2E-09 43.6 4.7 32 11-42 1-32 (328)
272 PRK09987 dTDP-4-dehydrorhamnos 97.7 7.8E-05 1.7E-09 44.4 4.2 32 11-43 2-33 (299)
273 KOG1611|consensus 97.7 0.00011 2.4E-09 43.0 4.7 38 8-45 2-41 (249)
274 PLN02520 bifunctional 3-dehydr 97.7 6.4E-05 1.4E-09 48.3 4.0 41 6-47 376-416 (529)
275 COG1090 Predicted nucleoside-d 97.7 7.4E-05 1.6E-09 44.9 4.0 36 12-47 1-36 (297)
276 KOG1429|consensus 97.6 0.00017 3.8E-09 43.7 5.0 37 7-43 25-61 (350)
277 PRK12320 hypothetical protein; 97.6 0.00015 3.2E-09 48.1 5.0 34 11-44 2-35 (699)
278 TIGR00507 aroE shikimate 5-deh 97.6 0.00015 3.3E-09 42.8 4.4 40 7-47 115-154 (270)
279 cd01075 NAD_bind_Leu_Phe_Val_D 97.6 0.00014 3.1E-09 41.4 4.2 41 4-45 23-63 (200)
280 PLN02260 probable rhamnose bio 97.6 0.00022 4.8E-09 46.6 5.4 36 7-42 4-41 (668)
281 PF01073 3Beta_HSD: 3-beta hyd 97.6 0.0001 2.2E-09 43.9 3.6 33 13-45 1-35 (280)
282 PRK05865 hypothetical protein; 97.6 0.0002 4.3E-09 48.4 5.0 33 11-43 2-34 (854)
283 TIGR02197 heptose_epim ADP-L-g 97.5 0.00016 3.5E-09 42.7 4.0 32 12-43 1-33 (314)
284 PF05368 NmrA: NmrA-like famil 97.5 0.00032 6.9E-09 40.2 4.9 32 12-43 1-32 (233)
285 TIGR01181 dTDP_gluc_dehyt dTDP 97.5 0.0002 4.3E-09 42.1 4.1 31 11-41 1-33 (317)
286 PRK07201 short chain dehydroge 97.5 0.00025 5.4E-09 45.9 4.7 33 11-43 2-36 (657)
287 PRK10084 dTDP-glucose 4,6 dehy 97.5 0.00025 5.3E-09 42.8 4.3 31 11-41 2-33 (352)
288 PF02737 3HCDH_N: 3-hydroxyacy 97.4 0.00027 5.8E-09 39.7 3.6 50 12-62 2-51 (180)
289 KOG1430|consensus 97.4 0.00064 1.4E-08 42.1 5.2 37 8-44 3-41 (361)
290 COG0623 FabI Enoyl-[acyl-carri 97.4 0.0012 2.5E-08 39.0 5.8 39 5-43 2-42 (259)
291 cd01065 NAD_bind_Shikimate_DH 97.3 0.00036 7.7E-09 37.7 3.4 41 6-47 16-57 (155)
292 PLN02725 GDP-4-keto-6-deoxyman 97.3 0.0007 1.5E-08 39.9 4.5 29 13-41 1-29 (306)
293 PRK07066 3-hydroxybutyryl-CoA 97.3 0.0012 2.5E-08 40.4 5.3 57 1-60 1-57 (321)
294 PRK12549 shikimate 5-dehydroge 97.2 0.001 2.2E-08 39.8 4.8 42 6-48 124-166 (284)
295 PRK07819 3-hydroxybutyryl-CoA 97.2 0.0012 2.6E-08 39.5 5.0 53 11-64 7-59 (286)
296 KOG1203|consensus 97.2 0.00097 2.1E-08 42.0 4.7 44 5-48 75-118 (411)
297 PRK09310 aroDE bifunctional 3- 97.2 0.00042 9.1E-09 44.1 3.1 41 6-47 329-369 (477)
298 PLN02996 fatty acyl-CoA reduct 97.2 0.0016 3.5E-08 41.6 5.6 39 7-45 9-50 (491)
299 COG1748 LYS9 Saccharopine dehy 97.1 0.00045 9.7E-09 43.2 2.6 37 10-47 2-39 (389)
300 PLN02503 fatty acyl-CoA reduct 97.1 0.0029 6.4E-08 41.6 6.3 39 7-45 117-158 (605)
301 PF04321 RmlD_sub_bind: RmlD s 97.1 0.0027 5.8E-08 37.8 5.8 37 11-47 2-38 (286)
302 PRK08268 3-hydroxy-acyl-CoA de 97.1 0.0016 3.6E-08 41.8 5.1 61 1-64 1-61 (507)
303 PRK06732 phosphopantothenate-- 97.1 0.0013 2.7E-08 38.3 4.2 33 11-43 17-50 (229)
304 PRK06129 3-hydroxyacyl-CoA deh 97.1 0.0013 2.9E-08 39.5 4.3 38 11-49 4-41 (308)
305 COG0169 AroE Shikimate 5-dehyd 97.1 0.0018 4E-08 39.0 4.8 47 6-53 123-170 (283)
306 PRK01438 murD UDP-N-acetylmura 97.1 0.0053 1.1E-07 38.9 7.1 38 6-44 13-50 (480)
307 PF02826 2-Hacid_dh_C: D-isome 97.1 0.0049 1.1E-07 34.4 6.2 41 4-45 31-71 (178)
308 TIGR01809 Shik-DH-AROM shikima 97.0 0.00093 2E-08 39.9 3.2 44 6-50 122-166 (282)
309 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.0035 7.6E-08 35.1 5.3 40 5-44 40-79 (168)
310 PRK06849 hypothetical protein; 97.0 0.0027 5.9E-08 39.2 5.3 37 8-44 3-39 (389)
311 PF00670 AdoHcyase_NAD: S-aden 97.0 0.0024 5.3E-08 35.6 4.6 39 5-44 19-57 (162)
312 cd05212 NAD_bind_m-THF_DH_Cycl 97.0 0.005 1.1E-07 33.5 5.6 39 5-43 24-62 (140)
313 PF00070 Pyr_redox: Pyridine n 97.0 0.012 2.6E-07 28.6 7.7 50 12-62 2-52 (80)
314 PRK14027 quinate/shikimate deh 96.9 0.0024 5.3E-08 38.3 4.6 44 6-50 124-168 (283)
315 TIGR02853 spore_dpaA dipicolin 96.9 0.0028 6.1E-08 38.1 4.6 40 5-45 147-186 (287)
316 TIGR02114 coaB_strep phosphopa 96.9 0.0032 6.9E-08 36.6 4.6 30 13-42 18-48 (227)
317 PLN02545 3-hydroxybutyryl-CoA 96.9 0.0027 5.8E-08 37.9 4.4 50 10-60 5-54 (295)
318 cd05311 NAD_bind_2_malic_enz N 96.9 0.011 2.3E-07 34.5 6.6 36 6-42 22-60 (226)
319 PRK14194 bifunctional 5,10-met 96.9 0.0049 1.1E-07 37.5 5.4 40 5-44 155-194 (301)
320 PRK06719 precorrin-2 dehydroge 96.8 0.0073 1.6E-07 33.3 5.6 34 6-40 10-43 (157)
321 TIGR01915 npdG NADPH-dependent 96.8 0.0051 1.1E-07 35.3 5.0 37 11-47 2-38 (219)
322 PRK14175 bifunctional 5,10-met 96.8 0.0065 1.4E-07 36.7 5.5 39 5-43 154-192 (286)
323 PF12242 Eno-Rase_NADH_b: NAD( 96.8 0.0061 1.3E-07 30.1 4.3 32 9-41 39-72 (78)
324 PRK08293 3-hydroxybutyryl-CoA 96.7 0.0048 1E-07 36.8 4.8 43 10-53 4-46 (287)
325 PF07993 NAD_binding_4: Male s 96.7 0.0033 7.1E-08 36.6 4.0 32 14-45 1-34 (249)
326 PLN02260 probable rhamnose bio 96.7 0.0078 1.7E-07 39.6 6.1 30 8-37 379-408 (668)
327 PRK14192 bifunctional 5,10-met 96.7 0.006 1.3E-07 36.7 5.1 38 5-42 155-192 (283)
328 PRK14188 bifunctional 5,10-met 96.7 0.0074 1.6E-07 36.6 5.5 38 6-43 155-193 (296)
329 PF02882 THF_DHG_CYH_C: Tetrah 96.7 0.0086 1.9E-07 33.3 5.3 39 5-43 32-70 (160)
330 PF13241 NAD_binding_7: Putati 96.7 0.0046 9.9E-08 31.7 3.9 37 5-42 3-39 (103)
331 cd01079 NAD_bind_m-THF_DH NAD 96.7 0.0075 1.6E-07 34.7 5.0 35 6-40 59-93 (197)
332 PF04127 DFP: DNA / pantothena 96.7 0.007 1.5E-07 34.4 4.9 27 17-43 27-53 (185)
333 PRK09260 3-hydroxybutyryl-CoA 96.7 0.005 1.1E-07 36.7 4.5 40 11-51 3-42 (288)
334 cd08295 double_bond_reductase_ 96.7 0.0042 9.1E-08 37.3 4.1 38 8-45 151-188 (338)
335 PRK07530 3-hydroxybutyryl-CoA 96.6 0.0065 1.4E-07 36.2 4.8 38 10-48 5-42 (292)
336 TIGR02279 PaaC-3OHAcCoADH 3-hy 96.6 0.0044 9.5E-08 39.9 4.3 53 10-63 6-58 (503)
337 PRK06718 precorrin-2 dehydroge 96.6 0.0079 1.7E-07 34.4 5.0 37 5-42 6-42 (202)
338 COG4982 3-oxoacyl-[acyl-carrie 96.6 0.011 2.4E-07 39.5 5.9 40 5-44 392-432 (866)
339 PRK14179 bifunctional 5,10-met 96.6 0.012 2.7E-07 35.5 5.7 35 5-39 154-188 (284)
340 PRK00066 ldh L-lactate dehydro 96.6 0.021 4.5E-07 34.8 6.7 40 7-47 4-45 (315)
341 COG2910 Putative NADH-flavin r 96.5 0.0076 1.6E-07 34.7 4.3 38 11-48 2-39 (211)
342 PRK10792 bifunctional 5,10-met 96.5 0.012 2.5E-07 35.6 5.3 40 5-44 155-194 (285)
343 COG1089 Gmd GDP-D-mannose dehy 96.5 0.0099 2.1E-07 36.4 4.9 37 9-45 2-38 (345)
344 PRK05476 S-adenosyl-L-homocyst 96.5 0.0097 2.1E-07 37.7 5.1 39 6-45 209-247 (425)
345 cd00401 AdoHcyase S-adenosyl-L 96.5 0.013 2.8E-07 37.1 5.5 39 6-45 199-237 (413)
346 PRK04308 murD UDP-N-acetylmura 96.5 0.015 3.2E-07 36.6 5.7 37 7-44 3-39 (445)
347 TIGR02825 B4_12hDH leukotriene 96.5 0.0061 1.3E-07 36.4 3.9 38 8-45 138-175 (325)
348 PLN02494 adenosylhomocysteinas 96.5 0.014 3E-07 37.6 5.6 39 6-45 251-289 (477)
349 cd05291 HicDH_like L-2-hydroxy 96.4 0.016 3.4E-07 35.0 5.7 36 11-47 2-39 (306)
350 PRK13940 glutamyl-tRNA reducta 96.4 0.004 8.7E-08 39.2 3.1 44 5-49 177-221 (414)
351 PRK05808 3-hydroxybutyryl-CoA 96.4 0.0098 2.1E-07 35.3 4.5 49 11-60 5-53 (282)
352 PTZ00075 Adenosylhomocysteinas 96.4 0.012 2.6E-07 37.8 5.0 40 5-45 250-289 (476)
353 PRK14191 bifunctional 5,10-met 96.4 0.016 3.4E-07 35.1 5.2 37 5-41 153-189 (285)
354 PLN03154 putative allyl alcoho 96.4 0.0072 1.6E-07 36.8 3.9 38 8-45 158-195 (348)
355 cd08259 Zn_ADH5 Alcohol dehydr 96.3 0.009 2E-07 35.3 4.2 37 8-44 162-198 (332)
356 cd08294 leukotriene_B4_DH_like 96.3 0.0092 2E-07 35.4 4.1 37 8-44 143-179 (329)
357 TIGR03443 alpha_am_amid L-amin 96.3 0.027 5.8E-07 39.6 6.8 37 9-45 971-1011(1389)
358 PRK14189 bifunctional 5,10-met 96.3 0.016 3.6E-07 35.0 5.1 38 6-43 155-192 (285)
359 cd05276 p53_inducible_oxidored 96.3 0.012 2.6E-07 34.3 4.5 36 8-43 139-174 (323)
360 PRK14183 bifunctional 5,10-met 96.3 0.016 3.4E-07 35.0 5.0 38 5-42 153-190 (281)
361 cd08253 zeta_crystallin Zeta-c 96.3 0.01 2.2E-07 34.7 4.1 37 8-44 144-180 (325)
362 COG1064 AdhP Zn-dependent alco 96.3 0.0074 1.6E-07 37.3 3.6 39 7-46 165-203 (339)
363 PRK12550 shikimate 5-dehydroge 96.3 0.0047 1E-07 36.9 2.7 39 9-48 122-161 (272)
364 TIGR01470 cysG_Nterm siroheme 96.3 0.02 4.3E-07 32.9 5.2 38 5-43 5-42 (205)
365 PRK14176 bifunctional 5,10-met 96.3 0.019 4E-07 34.8 5.2 39 5-43 160-198 (287)
366 PRK14180 bifunctional 5,10-met 96.3 0.019 4.1E-07 34.7 5.2 38 6-43 155-192 (282)
367 PRK14173 bifunctional 5,10-met 96.3 0.021 4.6E-07 34.6 5.4 40 5-44 151-190 (287)
368 PRK08306 dipicolinate synthase 96.3 0.024 5.1E-07 34.2 5.7 40 5-45 148-187 (296)
369 cd05191 NAD_bind_amino_acid_DH 96.2 0.033 7.1E-07 27.5 5.3 36 5-41 19-55 (86)
370 PRK00141 murD UDP-N-acetylmura 96.2 0.014 3.1E-07 37.1 4.8 40 4-44 10-49 (473)
371 cd08293 PTGR2 Prostaglandin re 96.2 0.01 2.3E-07 35.6 4.0 35 10-44 156-191 (345)
372 PRK14172 bifunctional 5,10-met 96.2 0.023 5E-07 34.3 5.4 38 6-43 155-192 (278)
373 PRK11730 fadB multifunctional 96.2 0.011 2.4E-07 39.5 4.4 53 10-63 314-366 (715)
374 PRK14177 bifunctional 5,10-met 96.2 0.016 3.4E-07 35.1 4.7 39 5-43 155-193 (284)
375 TIGR00715 precor6x_red precorr 96.2 0.014 3.1E-07 34.7 4.5 34 11-45 2-35 (256)
376 cd08266 Zn_ADH_like1 Alcohol d 96.2 0.012 2.7E-07 34.7 4.2 37 8-44 166-202 (342)
377 PRK14170 bifunctional 5,10-met 96.2 0.024 5.1E-07 34.3 5.3 39 5-43 153-191 (284)
378 PRK14186 bifunctional 5,10-met 96.2 0.025 5.3E-07 34.5 5.4 38 6-43 155-192 (297)
379 PRK08655 prephenate dehydrogen 96.1 0.014 3E-07 37.0 4.4 35 11-45 2-36 (437)
380 PRK14190 bifunctional 5,10-met 96.1 0.024 5.2E-07 34.3 5.2 37 6-42 155-191 (284)
381 TIGR00518 alaDH alanine dehydr 96.1 0.0088 1.9E-07 37.1 3.5 38 7-45 165-202 (370)
382 TIGR00936 ahcY adenosylhomocys 96.1 0.025 5.4E-07 35.8 5.4 39 6-45 192-230 (406)
383 PRK13243 glyoxylate reductase; 96.1 0.026 5.6E-07 34.6 5.4 39 5-44 146-184 (333)
384 TIGR01035 hemA glutamyl-tRNA r 96.1 0.012 2.6E-07 37.0 4.0 41 6-47 177-218 (417)
385 PRK14169 bifunctional 5,10-met 96.1 0.03 6.5E-07 33.9 5.4 38 6-43 153-190 (282)
386 TIGR02437 FadB fatty oxidation 96.1 0.015 3.2E-07 39.0 4.5 52 10-62 314-365 (714)
387 PRK12475 thiamine/molybdopteri 96.1 0.02 4.4E-07 35.2 4.8 37 6-43 21-58 (338)
388 PRK14166 bifunctional 5,10-met 96.1 0.029 6.3E-07 33.9 5.3 38 6-43 154-191 (282)
389 TIGR02354 thiF_fam2 thiamine b 96.1 0.023 4.9E-07 32.6 4.7 35 7-42 19-54 (200)
390 PRK12749 quinate/shikimate deh 96.0 0.028 6E-07 33.9 5.2 38 6-44 121-159 (288)
391 COG0604 Qor NADPH:quinone redu 96.0 0.013 2.9E-07 35.7 3.8 35 9-43 143-177 (326)
392 PRK14171 bifunctional 5,10-met 96.0 0.027 5.9E-07 34.1 5.0 38 6-43 156-193 (288)
393 COG1249 Lpd Pyruvate/2-oxoglut 96.0 0.089 1.9E-06 33.7 7.5 49 9-58 173-221 (454)
394 PRK06249 2-dehydropantoate 2-r 96.0 0.035 7.6E-07 33.5 5.5 33 10-43 6-38 (313)
395 PRK14187 bifunctional 5,10-met 96.0 0.033 7.1E-07 33.9 5.3 39 5-43 156-194 (294)
396 PRK00045 hemA glutamyl-tRNA re 96.0 0.015 3.3E-07 36.6 4.0 41 6-47 179-220 (423)
397 PLN02928 oxidoreductase family 95.9 0.035 7.7E-07 34.2 5.5 37 6-43 156-192 (347)
398 PLN02516 methylenetetrahydrofo 95.9 0.035 7.6E-07 33.8 5.3 39 5-43 163-201 (299)
399 COG3320 Putative dehydrogenase 95.9 0.024 5.2E-07 35.6 4.5 36 10-45 1-37 (382)
400 TIGR02824 quinone_pig3 putativ 95.9 0.026 5.5E-07 33.1 4.6 37 8-44 139-175 (325)
401 PRK06035 3-hydroxyacyl-CoA deh 95.9 0.019 4.1E-07 34.3 4.0 38 10-48 4-41 (291)
402 cd08268 MDR2 Medium chain dehy 95.9 0.019 4.2E-07 33.6 4.0 37 8-44 144-180 (328)
403 cd00650 LDH_MDH_like NAD-depen 95.9 0.045 9.6E-07 32.3 5.5 36 13-48 2-41 (263)
404 KOG1221|consensus 95.8 0.061 1.3E-06 34.7 6.3 38 7-44 10-50 (467)
405 PRK14182 bifunctional 5,10-met 95.8 0.031 6.6E-07 33.8 4.7 38 6-43 154-191 (282)
406 TIGR02356 adenyl_thiF thiazole 95.8 0.038 8.2E-07 31.6 4.9 37 6-43 18-55 (202)
407 COG0569 TrkA K+ transport syst 95.8 0.023 5E-07 33.0 4.0 36 11-47 2-37 (225)
408 COG2085 Predicted dinucleotide 95.8 0.031 6.7E-07 32.5 4.4 33 13-45 4-36 (211)
409 TIGR02441 fa_ox_alpha_mit fatt 95.7 0.022 4.8E-07 38.3 4.2 53 10-63 336-388 (737)
410 PRK12480 D-lactate dehydrogena 95.7 0.045 9.8E-07 33.6 5.3 39 6-45 143-181 (330)
411 cd01336 MDH_cytoplasmic_cytoso 95.7 0.047 1E-06 33.4 5.3 35 10-44 3-44 (325)
412 PRK11199 tyrA bifunctional cho 95.7 0.031 6.8E-07 34.7 4.6 35 9-43 98-132 (374)
413 COG1088 RfbB dTDP-D-glucose 4, 95.7 0.029 6.2E-07 34.5 4.3 32 10-41 1-34 (340)
414 PRK15116 sulfur acceptor prote 95.7 0.025 5.4E-07 33.9 4.0 39 6-45 27-66 (268)
415 PRK13982 bifunctional SbtC-lik 95.7 0.039 8.5E-07 35.6 5.1 37 5-41 252-304 (475)
416 PRK06487 glycerate dehydrogena 95.7 0.092 2E-06 32.0 6.5 37 6-43 145-181 (317)
417 PRK07688 thiamine/molybdopteri 95.7 0.025 5.5E-07 34.8 4.1 36 7-43 22-58 (339)
418 PLN02616 tetrahydrofolate dehy 95.7 0.045 9.8E-07 34.2 5.1 39 5-43 227-265 (364)
419 COG0190 FolD 5,10-methylene-te 95.6 0.042 9E-07 33.3 4.7 41 5-45 152-192 (283)
420 cd05213 NAD_bind_Glutamyl_tRNA 95.6 0.028 6.2E-07 34.0 4.0 41 6-47 175-216 (311)
421 PLN02897 tetrahydrofolate dehy 95.6 0.051 1.1E-06 33.8 5.1 38 6-43 211-248 (345)
422 PRK08410 2-hydroxyacid dehydro 95.6 0.067 1.4E-06 32.5 5.5 38 5-43 141-178 (311)
423 cd08289 MDR_yhfp_like Yhfp put 95.5 0.04 8.7E-07 32.7 4.5 37 9-45 147-183 (326)
424 PRK01390 murD UDP-N-acetylmura 95.5 0.052 1.1E-06 34.3 5.2 39 5-44 5-43 (460)
425 PF12076 Wax2_C: WAX2 C-termin 95.5 0.024 5.3E-07 31.7 3.3 28 12-39 1-28 (164)
426 PRK15469 ghrA bifunctional gly 95.5 0.083 1.8E-06 32.2 5.8 39 6-45 133-171 (312)
427 TIGR02355 moeB molybdopterin s 95.5 0.048 1E-06 32.0 4.7 39 7-46 22-61 (240)
428 KOG2865|consensus 95.5 0.039 8.4E-07 34.0 4.3 40 6-45 58-97 (391)
429 TIGR03201 dearomat_had 6-hydro 95.5 0.031 6.8E-07 33.9 4.0 37 8-45 166-202 (349)
430 PRK14193 bifunctional 5,10-met 95.5 0.071 1.5E-06 32.3 5.3 38 6-43 155-194 (284)
431 COG1250 FadB 3-hydroxyacyl-CoA 95.5 0.038 8.2E-07 33.8 4.2 52 10-62 4-55 (307)
432 PRK09880 L-idonate 5-dehydroge 95.5 0.025 5.3E-07 34.2 3.4 39 7-46 168-207 (343)
433 KOG1198|consensus 95.4 0.041 8.8E-07 34.1 4.4 39 7-45 156-194 (347)
434 PRK08328 hypothetical protein; 95.4 0.039 8.5E-07 32.2 4.1 38 7-45 25-63 (231)
435 PLN00203 glutamyl-tRNA reducta 95.4 0.017 3.8E-07 37.4 2.9 43 6-49 263-306 (519)
436 PRK14181 bifunctional 5,10-met 95.4 0.083 1.8E-06 32.1 5.4 38 6-43 150-191 (287)
437 PRK06130 3-hydroxybutyryl-CoA 95.4 0.044 9.6E-07 32.9 4.3 39 10-49 5-43 (311)
438 TIGR02822 adh_fam_2 zinc-bindi 95.3 0.05 1.1E-06 32.9 4.5 37 8-45 165-201 (329)
439 PRK05690 molybdopterin biosynt 95.3 0.067 1.4E-06 31.5 4.8 36 7-43 30-66 (245)
440 cd05188 MDR Medium chain reduc 95.3 0.037 8.1E-07 31.6 3.7 37 7-44 133-169 (271)
441 cd08250 Mgc45594_like Mgc45594 95.3 0.05 1.1E-06 32.3 4.3 37 8-44 139-175 (329)
442 cd08241 QOR1 Quinone oxidoredu 95.3 0.051 1.1E-06 31.7 4.3 37 8-44 139-175 (323)
443 PRK06436 glycerate dehydrogena 95.3 0.1 2.2E-06 31.8 5.6 38 5-43 118-155 (303)
444 PRK12409 D-amino acid dehydrog 95.3 0.07 1.5E-06 33.0 5.0 32 11-43 3-34 (410)
445 TIGR02440 FadJ fatty oxidation 95.2 0.05 1.1E-06 36.5 4.6 49 10-59 305-354 (699)
446 PRK01710 murD UDP-N-acetylmura 95.2 0.15 3.2E-06 32.4 6.5 37 7-44 12-48 (458)
447 cd08270 MDR4 Medium chain dehy 95.2 0.051 1.1E-06 31.9 4.2 38 8-45 132-169 (305)
448 KOG2018|consensus 95.2 0.036 7.8E-07 34.5 3.6 43 6-49 71-114 (430)
449 PF00056 Ldh_1_N: lactate/mala 95.2 0.046 1E-06 29.6 3.8 36 11-46 2-39 (141)
450 cd05288 PGDH Prostaglandin deh 95.2 0.043 9.4E-07 32.6 4.0 36 8-43 145-180 (329)
451 TIGR01421 gluta_reduc_1 glutat 95.2 0.26 5.7E-06 31.2 7.5 41 9-50 166-206 (450)
452 PRK11154 fadJ multifunctional 95.2 0.048 1E-06 36.6 4.4 51 10-61 310-361 (708)
453 PF03446 NAD_binding_2: NAD bi 95.2 0.012 2.7E-07 32.3 1.5 35 11-46 3-37 (163)
454 PRK07846 mycothione reductase; 95.2 0.26 5.7E-06 31.3 7.5 47 9-56 166-212 (451)
455 PF02558 ApbA: Ketopantoate re 95.2 0.087 1.9E-06 28.2 4.8 30 13-43 2-31 (151)
456 cd08243 quinone_oxidoreductase 95.1 0.054 1.2E-06 31.8 4.2 37 8-44 142-178 (320)
457 PRK09496 trkA potassium transp 95.1 0.045 9.8E-07 34.2 4.0 36 11-47 2-37 (453)
458 PTZ00325 malate dehydrogenase; 95.1 0.11 2.5E-06 31.8 5.5 39 4-42 3-43 (321)
459 cd08244 MDR_enoyl_red Possible 95.1 0.074 1.6E-06 31.4 4.6 37 8-44 142-178 (324)
460 PRK06932 glycerate dehydrogena 95.1 0.1 2.3E-06 31.8 5.3 38 5-43 143-180 (314)
461 cd00757 ThiF_MoeB_HesA_family 95.0 0.22 4.7E-06 28.9 6.4 35 7-42 19-54 (228)
462 cd08292 ETR_like_2 2-enoyl thi 95.0 0.062 1.3E-06 31.8 4.2 37 8-44 139-175 (324)
463 PRK14184 bifunctional 5,10-met 95.0 0.087 1.9E-06 32.0 4.8 38 6-43 154-195 (286)
464 PRK06522 2-dehydropantoate 2-r 95.0 0.036 7.9E-07 32.8 3.2 34 11-45 2-35 (304)
465 PRK14178 bifunctional 5,10-met 95.0 0.089 1.9E-06 31.8 4.8 39 5-43 148-186 (279)
466 PRK07236 hypothetical protein; 95.0 0.13 2.8E-06 31.7 5.6 37 7-44 4-40 (386)
467 TIGR01968 minD_bact septum sit 95.0 0.072 1.6E-06 30.8 4.4 36 9-44 1-41 (261)
468 PRK04148 hypothetical protein; 95.0 0.061 1.3E-06 29.2 3.8 36 8-45 16-51 (134)
469 COG1179 Dinucleotide-utilizing 95.0 0.11 2.3E-06 31.2 4.9 49 7-56 28-77 (263)
470 PRK14168 bifunctional 5,10-met 95.0 0.11 2.4E-06 31.7 5.1 39 5-43 157-199 (297)
471 KOG2304|consensus 94.9 0.042 9.1E-07 32.8 3.2 52 10-62 12-63 (298)
472 PRK08223 hypothetical protein; 94.9 0.071 1.5E-06 32.4 4.3 38 7-45 25-63 (287)
473 cd00755 YgdL_like Family of ac 94.9 0.066 1.4E-06 31.4 4.1 36 7-43 9-45 (231)
474 PRK14167 bifunctional 5,10-met 94.9 0.12 2.5E-06 31.6 5.2 38 6-43 154-195 (297)
475 PRK07574 formate dehydrogenase 94.9 0.11 2.3E-06 32.7 5.1 38 5-43 188-225 (385)
476 cd08288 MDR_yhdh Yhdh putative 94.9 0.088 1.9E-06 31.2 4.6 38 8-45 146-183 (324)
477 PRK07531 bifunctional 3-hydrox 94.9 0.066 1.4E-06 34.5 4.3 37 11-48 6-42 (495)
478 cd05313 NAD_bind_2_Glu_DH NAD( 94.9 0.14 3.1E-06 30.6 5.4 36 5-41 34-70 (254)
479 cd01076 NAD_bind_1_Glu_DH NAD( 94.9 0.13 2.9E-06 30.0 5.2 35 6-41 28-63 (227)
480 cd05280 MDR_yhdh_yhfp Yhdh and 94.8 0.081 1.8E-06 31.3 4.4 37 9-45 147-183 (325)
481 PLN03139 formate dehydrogenase 94.8 0.14 3E-06 32.2 5.5 38 5-43 195-232 (386)
482 PRK09496 trkA potassium transp 94.8 0.042 9E-07 34.4 3.2 39 7-46 229-267 (453)
483 cd05282 ETR_like 2-enoyl thioe 94.8 0.093 2E-06 31.0 4.5 38 8-45 138-175 (323)
484 KOG1204|consensus 94.8 0.018 3.9E-07 34.1 1.4 27 8-34 5-31 (253)
485 PRK06444 prephenate dehydrogen 94.8 0.092 2E-06 30.1 4.3 28 11-38 2-29 (197)
486 TIGR01969 minD_arch cell divis 94.7 0.098 2.1E-06 30.1 4.4 35 10-44 1-40 (251)
487 cd05294 LDH-like_MDH_nadp A la 94.7 0.13 2.9E-06 31.2 5.1 33 11-43 2-36 (309)
488 PF03807 F420_oxidored: NADP o 94.7 0.039 8.4E-07 27.5 2.4 31 17-47 6-40 (96)
489 PRK14185 bifunctional 5,10-met 94.7 0.15 3.2E-06 31.1 5.2 39 5-43 153-195 (293)
490 cd08239 THR_DH_like L-threonin 94.7 0.066 1.4E-06 32.2 3.8 37 8-45 163-200 (339)
491 COG1052 LdhA Lactate dehydroge 94.7 0.17 3.6E-06 31.2 5.5 39 5-44 142-180 (324)
492 PRK14619 NAD(P)H-dependent gly 94.7 0.15 3.2E-06 30.8 5.3 35 9-44 4-38 (308)
493 cd05211 NAD_bind_Glu_Leu_Phe_V 94.7 0.18 3.8E-06 29.3 5.4 38 5-43 19-57 (217)
494 PRK05597 molybdopterin biosynt 94.7 0.095 2.1E-06 32.5 4.5 36 7-43 26-62 (355)
495 cd05286 QOR2 Quinone oxidoredu 94.7 0.08 1.7E-06 30.8 4.0 37 8-44 136-172 (320)
496 COG1648 CysG Siroheme synthase 94.7 0.11 2.4E-06 30.1 4.5 37 6-43 9-45 (210)
497 PRK07251 pyridine nucleotide-d 94.7 0.52 1.1E-05 29.6 7.8 40 9-49 157-196 (438)
498 PF00899 ThiF: ThiF family; I 94.6 0.12 2.5E-06 27.5 4.3 33 9-42 2-35 (135)
499 PRK06370 mercuric reductase; V 94.6 0.52 1.1E-05 29.9 7.7 39 9-48 171-209 (463)
500 TIGR02817 adh_fam_1 zinc-bindi 94.6 0.098 2.1E-06 31.2 4.4 36 9-44 149-185 (336)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.35 E-value=1.6e-12 Score=76.47 Aligned_cols=45 Identities=38% Similarity=0.629 Sum_probs=40.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
..+.+++++|||+|+|||.++++.|+++|++|+++.|+.+++..+
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~l 46 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEAL 46 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH
Confidence 456789999999999999999999999999999999999887733
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.18 E-value=2.2e-11 Score=70.88 Aligned_cols=48 Identities=44% Similarity=0.585 Sum_probs=41.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHH
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTI 53 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 53 (66)
.+.+|.++|||+++|||.+++++|++.|++|+++.|..++++.+.+.+
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~ 50 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI 50 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh
Confidence 456799999999999999999999999999999999998877444433
No 3
>KOG0725|consensus
Probab=99.16 E-value=1.2e-10 Score=68.71 Aligned_cols=45 Identities=47% Similarity=0.709 Sum_probs=41.1
Q ss_pred CCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 3 ~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++..+.+|+++|||+++|||+++|..|++.|++|++++|+.+..+
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~ 46 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLE 46 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 346688999999999999999999999999999999999987754
No 4
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.14 E-value=1.1e-10 Score=69.61 Aligned_cols=43 Identities=30% Similarity=0.510 Sum_probs=38.6
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+++++|+++|||+++|||.+++++|+++|++|++++|+.++.
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~ 51 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG 51 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3567899999999999999999999999999999999986543
No 5
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.13 E-value=6.7e-10 Score=64.96 Aligned_cols=41 Identities=85% Similarity=1.158 Sum_probs=37.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
++.+|+++|||+++|||..+++.|+++|++|++++|+.+..
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 43 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPH 43 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccc
Confidence 46789999999999999999999999999999999987543
No 6
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.12 E-value=1.5e-10 Score=67.38 Aligned_cols=42 Identities=33% Similarity=0.506 Sum_probs=37.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.++.+|+++|||+++|||+++++.|+++|++|++++|+.+..
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 45 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL 45 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 457899999999999999999999999999999999986543
No 7
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.12 E-value=1.9e-10 Score=66.26 Aligned_cols=45 Identities=42% Similarity=0.528 Sum_probs=40.2
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|+...++.+|+++|||++++||.+++++|+++|++|++++|+.++
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~ 45 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER 45 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 555667889999999999999999999999999999999998654
No 8
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.12 E-value=7.6e-10 Score=66.00 Aligned_cols=41 Identities=27% Similarity=0.575 Sum_probs=37.5
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+.++++|+++|||+++|||+++++.|++.|++|++++|+..
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~ 43 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTR 43 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 45678999999999999999999999999999999999854
No 9
>KOG1205|consensus
Probab=99.11 E-value=1.4e-10 Score=68.91 Aligned_cols=45 Identities=42% Similarity=0.673 Sum_probs=40.7
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
+.++.+|+++|||+|+|||.+++.+|+.+|++++++.|...+++.
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~ 51 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLER 51 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHH
Confidence 345789999999999999999999999999999999998888773
No 10
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.11 E-value=2.7e-10 Score=65.99 Aligned_cols=43 Identities=30% Similarity=0.403 Sum_probs=38.8
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..++++|+++|||+++|||+++++.|+++|++|++++|+.++.
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~ 45 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERL 45 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 3567899999999999999999999999999999999987544
No 11
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.6e-10 Score=66.37 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=40.9
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|+.++++++|+++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~ 45 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK 45 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 667778899999999999999999999999999999999997644
No 12
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.6e-10 Score=65.70 Aligned_cols=41 Identities=41% Similarity=0.628 Sum_probs=37.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
++++|+++|||+++|||.++++.|+++|++|++++|++++.
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~ 43 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL 43 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46789999999999999999999999999999999986543
No 13
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.09 E-value=2.7e-10 Score=66.45 Aligned_cols=44 Identities=32% Similarity=0.397 Sum_probs=38.9
Q ss_pred CCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 2 ~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
....++.+|+++|||++++||++++++|+++|++|++++|+.+.
T Consensus 3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~ 46 (278)
T PRK08277 3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK 46 (278)
T ss_pred CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34457889999999999999999999999999999999998643
No 14
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.08 E-value=3.5e-10 Score=65.22 Aligned_cols=43 Identities=42% Similarity=0.563 Sum_probs=38.2
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..++.+|+++|||+++|||.++++.|+++|++|++++|+.+..
T Consensus 4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (253)
T PRK05867 4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDAL 46 (253)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 3457899999999999999999999999999999999986543
No 15
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.07 E-value=4e-10 Score=64.69 Aligned_cols=42 Identities=21% Similarity=0.372 Sum_probs=37.9
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++++|+++|||+++|||++++.+|+++|++|++++|+.+.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~ 43 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALK 43 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 467899999999999999999999999999999999876543
No 16
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.06 E-value=4.1e-10 Score=66.05 Aligned_cols=42 Identities=29% Similarity=0.406 Sum_probs=37.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..+.+|+++|||+++|||+++++.|+++|++|++++|+.+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l 43 (275)
T PRK05876 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL 43 (275)
T ss_pred CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 347789999999999999999999999999999999886443
No 17
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.05 E-value=5e-10 Score=67.43 Aligned_cols=43 Identities=35% Similarity=0.489 Sum_probs=38.3
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+.++.+++++|||+++|||+++++.|+++|++|++++|+.+.+
T Consensus 3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l 45 (334)
T PRK07109 3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL 45 (334)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4557889999999999999999999999999999999986543
No 18
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.05 E-value=3.3e-10 Score=65.01 Aligned_cols=42 Identities=36% Similarity=0.551 Sum_probs=38.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++|-+++|||+++|||++++++|.+.|-+|+++.|+++.++
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~ 43 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLA 43 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHH
Confidence 467889999999999999999999999999999999976654
No 19
>KOG1014|consensus
Probab=99.05 E-value=2.7e-10 Score=68.17 Aligned_cols=42 Identities=40% Similarity=0.527 Sum_probs=38.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
.|+|++|||++.|||++.+++|+++|.+|++.+|++++++.+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v 89 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAV 89 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 369999999999999999999999999999999999998833
No 20
>PRK06398 aldose dehydrogenase; Validated
Probab=99.05 E-value=2.7e-09 Score=61.92 Aligned_cols=40 Identities=28% Similarity=0.466 Sum_probs=36.9
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++|+++|||+++|||+++++.|+++|++|++.+|+...
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~ 42 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS 42 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc
Confidence 5788999999999999999999999999999999998654
No 21
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.05 E-value=4.7e-10 Score=67.62 Aligned_cols=43 Identities=47% Similarity=0.665 Sum_probs=38.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++.+++++|||+++|||+++++.|+++|++|++++|+.+.++
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~ 45 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ 45 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 3467899999999999999999999999999999999865543
No 22
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.05 E-value=5.5e-10 Score=64.55 Aligned_cols=42 Identities=38% Similarity=0.585 Sum_probs=37.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.++.+|+++|||+++|||+++++.|+++|++|++++|+.+..
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~ 44 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALA 44 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 457789999999999999999999999999999999976543
No 23
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.05 E-value=4.5e-10 Score=66.42 Aligned_cols=45 Identities=27% Similarity=0.423 Sum_probs=40.2
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|+.+.++++++++|||+++|||..+++.|+++|++|++++|+.+.
T Consensus 1 ~~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 45 (296)
T PRK05872 1 GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE 45 (296)
T ss_pred CCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 455667889999999999999999999999999999999997654
No 24
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.04 E-value=6.9e-10 Score=63.83 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=38.0
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++++|+++|||++++||.++++.|+++|++|++++|+.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~ 44 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG 44 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 456789999999999999999999999999999999997654
No 25
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.03 E-value=7.3e-10 Score=64.35 Aligned_cols=44 Identities=18% Similarity=0.157 Sum_probs=38.8
Q ss_pred CCCCCCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 1 MINTGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|-+..++++|+++|||++ +|||++++++|+++|++|++++|+.+
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~ 47 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK 47 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh
Confidence 455677899999999998 49999999999999999999999753
No 26
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.03 E-value=6.1e-10 Score=65.95 Aligned_cols=42 Identities=31% Similarity=0.472 Sum_probs=37.8
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++.+|+++|||+++|||.++++.|+++|++|++++|+.+.
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~ 52 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDK 52 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 456789999999999999999999999999999999997543
No 27
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.03 E-value=7.6e-10 Score=63.81 Aligned_cols=41 Identities=32% Similarity=0.537 Sum_probs=37.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+|+++|||++++||+.++++|+++|++|++.+|++++
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~ 46 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK 46 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 45789999999999999999999999999999999998654
No 28
>KOG1201|consensus
Probab=99.03 E-value=1.1e-09 Score=65.30 Aligned_cols=43 Identities=35% Similarity=0.550 Sum_probs=39.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.+..|+.++|||+++|+|++++.+|+++|+++++.|.+.+...
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~ 76 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE 76 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH
Confidence 4578999999999999999999999999999999999987765
No 29
>PRK08589 short chain dehydrogenase; Validated
Probab=99.02 E-value=9.6e-10 Score=64.21 Aligned_cols=37 Identities=38% Similarity=0.555 Sum_probs=35.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++++|+++|||+++|||+++++.|+++|++|++++|+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4678999999999999999999999999999999997
No 30
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1e-09 Score=63.37 Aligned_cols=44 Identities=30% Similarity=0.467 Sum_probs=40.0
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|+...++++|+++|||+++|||.+++++|+++|++|++++|+.+
T Consensus 1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 56667889999999999999999999999999999999999754
No 31
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1e-09 Score=63.16 Aligned_cols=46 Identities=35% Similarity=0.493 Sum_probs=41.3
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
|.+..++.++.++|||++++||.++++.|+++|++|++++|+.++.
T Consensus 1 ~~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~ 46 (258)
T PRK06949 1 MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERL 46 (258)
T ss_pred CCcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5567788999999999999999999999999999999999986543
No 32
>PRK06194 hypothetical protein; Provisional
Probab=99.01 E-value=1.2e-09 Score=63.98 Aligned_cols=40 Identities=33% Similarity=0.458 Sum_probs=36.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+++++|||+++|||++++++|+++|++|++++|+.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~ 42 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA 42 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 4668999999999999999999999999999999987543
No 33
>KOG1208|consensus
Probab=99.01 E-value=7.7e-10 Score=66.61 Aligned_cols=44 Identities=36% Similarity=0.475 Sum_probs=39.7
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
..++++++++|||+++|||.++++.|+.+|++|++.+|+.+..+
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~ 73 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGE 73 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 34678899999999999999999999999999999999986554
No 34
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.01 E-value=5.5e-10 Score=67.00 Aligned_cols=40 Identities=33% Similarity=0.584 Sum_probs=36.8
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.+++++|||+++|||++++++|+++|++|++++|++++++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~ 91 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLK 91 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 5899999999999999999999999999999999876544
No 35
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.4e-09 Score=62.15 Aligned_cols=41 Identities=37% Similarity=0.609 Sum_probs=37.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++++.++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~ 42 (239)
T PRK08703 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK 42 (239)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHH
Confidence 45778999999999999999999999999999999998754
No 36
>PRK06196 oxidoreductase; Provisional
Probab=98.99 E-value=9.5e-10 Score=65.46 Aligned_cols=41 Identities=29% Similarity=0.511 Sum_probs=37.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+|+++|||+++|||.+++++|+++|++|++++|+.+.
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~ 62 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV 62 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 45678999999999999999999999999999999998654
No 37
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.98 E-value=1.9e-09 Score=62.10 Aligned_cols=41 Identities=44% Similarity=0.648 Sum_probs=37.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+++++.++|||++++||..+++.|+++|++|++++|+++..
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~ 44 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA 44 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence 56789999999999999999999999999999999987543
No 38
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.3e-09 Score=63.23 Aligned_cols=41 Identities=29% Similarity=0.371 Sum_probs=37.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++|+++|||+++|||+++++.|+++|++|++++|+.+.
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 42 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN 42 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999998654
No 39
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.97 E-value=2.9e-09 Score=61.73 Aligned_cols=45 Identities=38% Similarity=0.450 Sum_probs=40.2
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|....++.+|+++|||+++|||+++++.|+++|++|++.+++...
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 555567889999999999999999999999999999999998654
No 40
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.96 E-value=1.9e-09 Score=63.83 Aligned_cols=42 Identities=40% Similarity=0.569 Sum_probs=37.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..+.++.++|||+++|||+++++.|+++|++|++++|+.+..
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l 77 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL 77 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 346789999999999999999999999999999999986543
No 41
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.95 E-value=3.7e-09 Score=63.34 Aligned_cols=44 Identities=32% Similarity=0.374 Sum_probs=37.9
Q ss_pred CCCCCCCEEEEecC--CChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 4 ~~~~~~~~~~vtg~--~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
.+++++|+++|||+ ++|||+++++.|++.|++|++ .|+.+.++.
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~ 49 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNI 49 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhH
Confidence 35589999999999 899999999999999999988 676666553
No 42
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3.5e-09 Score=62.45 Aligned_cols=38 Identities=39% Similarity=0.602 Sum_probs=35.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+|+++|||+++|||+++++.|++.|++|++++++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 46789999999999999999999999999999998765
No 43
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.94 E-value=2.8e-09 Score=61.33 Aligned_cols=41 Identities=39% Similarity=0.634 Sum_probs=37.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+|+++|||++++||.+++.+|+++|++|++++|+.+.
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~ 43 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAG 43 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999998654
No 44
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.94 E-value=6.7e-09 Score=59.99 Aligned_cols=41 Identities=34% Similarity=0.559 Sum_probs=37.2
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+.++++|+++|||+++|||++++++|+++|++|++++|+.+
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 34678999999999999999999999999999999998754
No 45
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.93 E-value=4.9e-09 Score=60.59 Aligned_cols=39 Identities=33% Similarity=0.543 Sum_probs=36.0
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
..++.+|+++|||++++||..+++.|+++|++|++++|+
T Consensus 10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 345789999999999999999999999999999999887
No 46
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.93 E-value=3.7e-09 Score=61.37 Aligned_cols=43 Identities=47% Similarity=0.441 Sum_probs=38.2
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..++.+|+++|||++++||.+++++|+++|++|++.+|+.++.
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~ 47 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV 47 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 3567899999999999999999999999999999998876543
No 47
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.93 E-value=2.8e-09 Score=61.34 Aligned_cols=39 Identities=41% Similarity=0.807 Sum_probs=35.9
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.+|+++|||++++||+++++.|+++|++|++++|+++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~ 41 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER 41 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 568999999999999999999999999999999998654
No 48
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.93 E-value=3.7e-09 Score=60.61 Aligned_cols=41 Identities=39% Similarity=0.613 Sum_probs=36.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++++++|||++++||..+++.|+++|++|++.+|+.+.
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~ 42 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEG 42 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999998643
No 49
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.93 E-value=2.2e-09 Score=62.16 Aligned_cols=40 Identities=33% Similarity=0.569 Sum_probs=36.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++|+++|||+++|||.++++.|+++|++|++++|+.+.
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 42 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK 42 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4678999999999999999999999999999999998644
No 50
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.92 E-value=3.4e-09 Score=61.52 Aligned_cols=41 Identities=44% Similarity=0.639 Sum_probs=37.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+++++|||++++||.++++.|+++|++|++++|+.+.
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~ 46 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ 46 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 45789999999999999999999999999999999998654
No 51
>PRK05717 oxidoreductase; Validated
Probab=98.92 E-value=3.8e-09 Score=60.99 Aligned_cols=42 Identities=33% Similarity=0.442 Sum_probs=37.6
Q ss_pred CCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 3 ~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..+++.+|+++|||++++||+++++.|+++|++|++++|+.+
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~ 45 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE 45 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 345688999999999999999999999999999999988753
No 52
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.92 E-value=1.4e-09 Score=63.11 Aligned_cols=39 Identities=31% Similarity=0.637 Sum_probs=36.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++++|+++|||+++|||.++++.|+++|++|++++|+.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 40 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA 40 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 367899999999999999999999999999999999764
No 53
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.91 E-value=4.1e-09 Score=60.75 Aligned_cols=41 Identities=32% Similarity=0.535 Sum_probs=37.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++|+++|||++++||+.+++.|+++|++|++++|+.+.
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~ 47 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT 47 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 45789999999999999999999999999999999998643
No 54
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.91 E-value=2.8e-09 Score=63.56 Aligned_cols=41 Identities=32% Similarity=0.417 Sum_probs=36.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+.+|+++|||+++|||.++++.|+++|++|++++|+.++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~ 42 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK 42 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 34568999999999999999999999999999999997543
No 55
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1.8e-09 Score=61.70 Aligned_cols=45 Identities=42% Similarity=0.595 Sum_probs=40.7
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|..+.+++++.++|||+++++|..++..|+++|++|++++|+.++
T Consensus 1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~ 45 (245)
T PRK07060 1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA 45 (245)
T ss_pred CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 666778899999999999999999999999999999999997643
No 56
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.90 E-value=6e-09 Score=60.64 Aligned_cols=39 Identities=38% Similarity=0.441 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEecCCC--hHHHHHHHHHHhCCCeEEEEecC
Q psy6114 4 TGKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~--gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
...+.+|+++|||+++ |||+++++.|+++|++|++++|+
T Consensus 3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 4557899999999997 99999999999999999999886
No 57
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.90 E-value=5.2e-09 Score=60.52 Aligned_cols=39 Identities=36% Similarity=0.526 Sum_probs=35.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|+++|||+++|||++++++|+++|++|++++|+.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 467899999999999999999999999999999988753
No 58
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.90 E-value=7.5e-09 Score=60.53 Aligned_cols=36 Identities=31% Similarity=0.515 Sum_probs=33.6
Q ss_pred CCCCEEEEecCCC--hHHHHHHHHHHhCCCeEEEEecC
Q psy6114 7 LSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 7 ~~~~~~~vtg~~~--gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
+.+|+++|||+++ |||+++++.|+++|++|++++|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6789999999985 99999999999999999999886
No 59
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.90 E-value=4.7e-09 Score=60.72 Aligned_cols=42 Identities=38% Similarity=0.601 Sum_probs=37.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++++|+++|||+++|+|.+++..|+++|++|++++|+.++.+
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE 45 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467899999999999999999999999999999999865443
No 60
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.90 E-value=5.6e-09 Score=60.54 Aligned_cols=39 Identities=38% Similarity=0.694 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
+.++++|+++|||+++|||+++++.|++.|++|+++++.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 356789999999999999999999999999999888764
No 61
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.90 E-value=4.8e-09 Score=60.47 Aligned_cols=40 Identities=35% Similarity=0.596 Sum_probs=36.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+++.+|+++|||+++|||+++++.|+++|++|++++|+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~ 41 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP 41 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3578999999999999999999999999999999999763
No 62
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.89 E-value=6.1e-09 Score=60.59 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.1
Q ss_pred CCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|+++|||++ +|||+++++.|+++|++|++++|+.
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~ 43 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE 43 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc
Confidence 45789999999997 8999999999999999999998763
No 63
>PRK06720 hypothetical protein; Provisional
Probab=98.89 E-value=7e-09 Score=57.64 Aligned_cols=40 Identities=38% Similarity=0.612 Sum_probs=36.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++.++|||+++|||.+++..|++.|++|++++|+.+.
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~ 52 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES 52 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4679999999999999999999999999999999987543
No 64
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=1e-08 Score=60.98 Aligned_cols=40 Identities=40% Similarity=0.576 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..++.+|+++|||+++|||++++++|+++|++|++++++.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~ 46 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS 46 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc
Confidence 3567899999999999999999999999999999998753
No 65
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.89 E-value=3.3e-09 Score=61.76 Aligned_cols=40 Identities=38% Similarity=0.458 Sum_probs=36.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+++++|||+++|||+.++++|+++|++|++++|+++.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~ 41 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEAL 41 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4568899999999999999999999999999999998654
No 66
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=5.8e-09 Score=59.60 Aligned_cols=41 Identities=46% Similarity=0.729 Sum_probs=36.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++.++|||++++||..++++|+++|++|++++|+.+.
T Consensus 3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~ 43 (239)
T PRK07666 3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEEN 43 (239)
T ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34567899999999999999999999999999999998654
No 67
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.88 E-value=7.2e-09 Score=59.81 Aligned_cols=41 Identities=41% Similarity=0.618 Sum_probs=36.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+.+|+++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~ 47 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA 47 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 34678999999999999999999999999999999987544
No 68
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.88 E-value=8.1e-09 Score=58.57 Aligned_cols=40 Identities=35% Similarity=0.540 Sum_probs=36.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++|+++|||++++||..+++.|+++|++|++++|+.++
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~ 43 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP 43 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHh
Confidence 4678999999999999999999999999999999997644
No 69
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.88 E-value=6.6e-09 Score=59.67 Aligned_cols=40 Identities=48% Similarity=0.676 Sum_probs=36.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+++++++|||+++++|..++++|+++|++|++++|+++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~ 41 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA 41 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 4678999999999999999999999999999999986653
No 70
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=6.9e-09 Score=60.10 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=34.5
Q ss_pred CCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+.+|+++|||++ +|||++++++|++.|++|++++|+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 3679999999999 799999999999999999999887
No 71
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.87 E-value=5.1e-09 Score=60.43 Aligned_cols=40 Identities=38% Similarity=0.602 Sum_probs=36.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.++.++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~ 42 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR 42 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 4678999999999999999999999999999999988654
No 72
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.87 E-value=8.1e-09 Score=59.62 Aligned_cols=40 Identities=35% Similarity=0.771 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..++.+|+++|||+++|||.+++++|+++|++|++++|+.
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~ 42 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 3447889999999999999999999999999999999874
No 73
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.86 E-value=8.2e-09 Score=59.03 Aligned_cols=41 Identities=34% Similarity=0.530 Sum_probs=36.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+++++++|||++++||..+++.|+++|++|++++|++++
T Consensus 3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~ 43 (250)
T PRK12939 3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE 43 (250)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999887653
No 74
>PRK09186 flagellin modification protein A; Provisional
Probab=98.86 E-value=8.6e-09 Score=59.27 Aligned_cols=39 Identities=36% Similarity=0.456 Sum_probs=35.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++|+++|||++++||+++++.|+++|++|++++|+.+.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~ 40 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEA 40 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHH
Confidence 468999999999999999999999999999999987654
No 75
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.2e-08 Score=59.31 Aligned_cols=38 Identities=34% Similarity=0.509 Sum_probs=34.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
.+++++|||+++|||++++++|+++| ++|++++|+.+.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~ 45 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP 45 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence 57889999999999999999999985 999999998764
No 76
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.85 E-value=8.4e-09 Score=58.96 Aligned_cols=39 Identities=41% Similarity=0.761 Sum_probs=35.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.++.++|||+++++|.++++.|+++|++|++++|+.+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~ 41 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD 41 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456789999999999999999999999999999999854
No 77
>PLN02253 xanthoxin dehydrogenase
Probab=98.85 E-value=6.7e-09 Score=60.65 Aligned_cols=40 Identities=30% Similarity=0.498 Sum_probs=36.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.+|+++|||+++|||++++++|+++|++|++++|+.+
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~ 53 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDD 53 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 3567899999999999999999999999999999998754
No 78
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.85 E-value=5e-09 Score=61.42 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=34.3
Q ss_pred CCCCEEEEecCCC--hHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 7 LSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~--gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.+|+++|||+++ |||++++++|++.|++|++++|+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 6789999999996 999999999999999999998864
No 79
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.84 E-value=9.8e-09 Score=59.22 Aligned_cols=41 Identities=37% Similarity=0.545 Sum_probs=37.7
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++++++|||++++||+.+++.|+++|++|++++|+.+.
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~ 43 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD 43 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh
Confidence 56889999999999999999999999999999999998754
No 80
>PRK09242 tropinone reductase; Provisional
Probab=98.83 E-value=7.8e-09 Score=59.67 Aligned_cols=41 Identities=46% Similarity=0.629 Sum_probs=37.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+|.++|||++++||..++..|+++|++|++++|+.+.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~ 45 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADA 45 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 45789999999999999999999999999999999997644
No 81
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.83 E-value=9.5e-09 Score=58.81 Aligned_cols=41 Identities=39% Similarity=0.666 Sum_probs=37.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
++.+++++|||++++||.++++.|+++|++|++++|+.+..
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~ 42 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA 42 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46788999999999999999999999999999999987543
No 82
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.83 E-value=2.5e-08 Score=57.19 Aligned_cols=39 Identities=38% Similarity=0.572 Sum_probs=35.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.+++++|||++++||..+++.|+++|++|++++|+.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~ 41 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA 41 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch
Confidence 467899999999999999999999999999999988753
No 83
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.8e-08 Score=59.31 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=34.5
Q ss_pred CCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+|+++|||++ +|||+++++.|++.|++|++++|+.
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 3578999999997 7999999999999999999999874
No 84
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.1e-08 Score=58.82 Aligned_cols=40 Identities=38% Similarity=0.625 Sum_probs=36.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++|+++|||++++||..+++.|++.|++|++++|+.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~ 48 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK 48 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHH
Confidence 4679999999999999999999999999999999998644
No 85
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.82 E-value=8.5e-09 Score=59.52 Aligned_cols=41 Identities=37% Similarity=0.562 Sum_probs=36.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+.+++++|||++++||.+++++|+++|++|++++|+...
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~ 43 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA 43 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 34778999999999999999999999999999999997653
No 86
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.82 E-value=8.3e-09 Score=59.80 Aligned_cols=40 Identities=38% Similarity=0.605 Sum_probs=36.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++.++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~ 41 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK 41 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4578999999999999999999999999999999998654
No 87
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.82 E-value=1.7e-08 Score=57.35 Aligned_cols=40 Identities=55% Similarity=0.810 Sum_probs=36.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++.++|||+++++|..+++.|+++|++|++++|+++.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~ 41 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEA 41 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhH
Confidence 4567899999999999999999999999999999998754
No 88
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.82 E-value=9.5e-09 Score=59.72 Aligned_cols=38 Identities=32% Similarity=0.401 Sum_probs=35.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+++++|||+++|||.+++++|+++|++|++++|+.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 46789999999999999999999999999999999876
No 89
>PRK08643 acetoin reductase; Validated
Probab=98.81 E-value=1.4e-08 Score=58.49 Aligned_cols=37 Identities=35% Similarity=0.526 Sum_probs=34.2
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+|+++|||++++||.++++.|+++|++|++++|+.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~ 38 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEET 38 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 6899999999999999999999999999999997654
No 90
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.81 E-value=1.6e-08 Score=58.03 Aligned_cols=38 Identities=39% Similarity=0.647 Sum_probs=35.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++++|.++|||++++||.+++++|+++|++|++++|+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 46789999999999999999999999999999999864
No 91
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.81 E-value=1.1e-08 Score=58.58 Aligned_cols=40 Identities=43% Similarity=0.689 Sum_probs=36.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+|+++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~ 41 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEA 41 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHH
Confidence 4678999999999999999999999999999999998653
No 92
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.80 E-value=1.3e-08 Score=66.21 Aligned_cols=42 Identities=33% Similarity=0.542 Sum_probs=37.8
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..++.+|+++|||+++|||++++++|+++|++|++++|+.+.
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~ 450 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEA 450 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 445789999999999999999999999999999999998644
No 93
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.80 E-value=1.3e-08 Score=58.84 Aligned_cols=41 Identities=44% Similarity=0.625 Sum_probs=36.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++++++|||++++||..+++.|+++|++|++++|+.++
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~ 48 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE 48 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999997543
No 94
>PRK07985 oxidoreductase; Provisional
Probab=98.79 E-value=2.1e-08 Score=59.36 Aligned_cols=38 Identities=32% Similarity=0.582 Sum_probs=34.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++++|+++|||+++|||.++++.|+++|++|++.+|+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~ 83 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV 83 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc
Confidence 47789999999999999999999999999999987753
No 95
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.79 E-value=4.4e-08 Score=56.95 Aligned_cols=39 Identities=31% Similarity=0.408 Sum_probs=34.3
Q ss_pred CCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.+|+++|||++ +|||++++++|++.|++|++++++.+
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~ 43 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDE 43 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcc
Confidence 4678999999986 89999999999999999998876543
No 96
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.5e-08 Score=58.38 Aligned_cols=38 Identities=45% Similarity=0.684 Sum_probs=34.5
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+|+++|||+++|||.++++.|+++|++|++++|+.+..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~ 38 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL 38 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 57899999999999999999999999999999986543
No 97
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.7e-08 Score=58.04 Aligned_cols=40 Identities=35% Similarity=0.513 Sum_probs=36.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+++.+++++|||++++||.++++.|+++|++|++++|+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~ 50 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED 50 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3567899999999999999999999999999999999754
No 98
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.78 E-value=1.2e-08 Score=59.07 Aligned_cols=35 Identities=37% Similarity=0.638 Sum_probs=32.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|||+++|||++++++|+++|++|++++|+++.
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 36 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEEN 36 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 68999999999999999999999999999998654
No 99
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.78 E-value=2.5e-08 Score=58.08 Aligned_cols=37 Identities=32% Similarity=0.438 Sum_probs=33.4
Q ss_pred CCCCCEEEEecC--CChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~--~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+++|+++|||+ ++|||+++++.|+++|++|++++|+
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 467899999996 6799999999999999999998775
No 100
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.78 E-value=1.9e-08 Score=57.52 Aligned_cols=40 Identities=33% Similarity=0.524 Sum_probs=36.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++++++|||++++||..+++.|+++|+.|++++|+.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~ 41 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK 41 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3678999999999999999999999999999999988643
No 101
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.78 E-value=7e-08 Score=56.06 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.5
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++|||++++||++++++|+++|++|++.+|+.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~ 40 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR 40 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 35789999999999999999999999999999998544
No 102
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.78 E-value=1.4e-08 Score=58.14 Aligned_cols=39 Identities=33% Similarity=0.561 Sum_probs=35.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+.+|+++|||++++||..++++|+++|++|++++|+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~ 41 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPA 41 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHH
Confidence 467899999999999999999999999999999998753
No 103
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=2.2e-08 Score=58.15 Aligned_cols=39 Identities=31% Similarity=0.459 Sum_probs=35.3
Q ss_pred CCCCCCEEEEecC--CChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~--~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|+++|||+ ++|||.++++.|+++|++|++++|+.
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~ 43 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR 43 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc
Confidence 4478899999999 89999999999999999999998764
No 104
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.77 E-value=2.1e-08 Score=58.53 Aligned_cols=38 Identities=29% Similarity=0.423 Sum_probs=34.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++|||+++++|..+++.|+++|++|++++|+++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~ 39 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEK 39 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 46889999999999999999999999999999998654
No 105
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.77 E-value=4e-08 Score=56.89 Aligned_cols=39 Identities=36% Similarity=0.658 Sum_probs=35.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++++|+++|||++++||.++++.|+++|+.|++++|+.
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357899999999999999999999999999999988854
No 106
>PRK05599 hypothetical protein; Provisional
Probab=98.76 E-value=1.7e-08 Score=58.30 Aligned_cols=37 Identities=30% Similarity=0.507 Sum_probs=32.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++++|||+++|||.++++.|+ +|++|++++|+.++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~ 37 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ 37 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH
Confidence 468999999999999999999 5999999999865543
No 107
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2e-08 Score=57.16 Aligned_cols=39 Identities=38% Similarity=0.567 Sum_probs=35.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.++.++|||+++++|..++++|+++|++|++++|+++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~ 42 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE 42 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH
Confidence 557999999999999999999999999999999998654
No 108
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.76 E-value=3.1e-08 Score=57.31 Aligned_cols=39 Identities=46% Similarity=0.707 Sum_probs=35.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+.+++++|||++++||+.+++.|+++|++|++++|+.
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence 346789999999999999999999999999999999875
No 109
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.75 E-value=2.1e-08 Score=57.75 Aligned_cols=35 Identities=51% Similarity=0.728 Sum_probs=31.7
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
+.+|+++|||+++|||.+++++|++.|++|++.++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 35799999999999999999999999999988753
No 110
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.75 E-value=1.9e-08 Score=57.70 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=33.8
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
|+++|||++++||..++++|+++|++|++++|+++..
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~ 38 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERL 38 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 5799999999999999999999999999999987543
No 111
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=2.6e-08 Score=56.78 Aligned_cols=40 Identities=35% Similarity=0.597 Sum_probs=36.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++.++|||++++||..+++.|+++|++|++++|+++.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~ 41 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENK 41 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3568999999999999999999999999999999997654
No 112
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.75 E-value=2.4e-08 Score=57.18 Aligned_cols=39 Identities=31% Similarity=0.471 Sum_probs=35.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++.++|||++++||..++++|+++|++|++.+|+.+.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~ 39 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA 39 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH
Confidence 357899999999999999999999999999999887644
No 113
>PRK08264 short chain dehydrogenase; Validated
Probab=98.74 E-value=2.9e-08 Score=56.64 Aligned_cols=42 Identities=33% Similarity=0.552 Sum_probs=37.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~ 46 (66)
+.+.++.++|||+++++|+++++.|+++|+ +|++++|+.++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~ 44 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV 44 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh
Confidence 346778999999999999999999999998 999999986544
No 114
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.74 E-value=4.6e-08 Score=57.40 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=34.4
Q ss_pred CCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
..+.+|+++|||++ +|||+++++.|+++|++|++++|+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 45678999999997 899999999999999999998876
No 115
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.74 E-value=4e-08 Score=58.80 Aligned_cols=39 Identities=33% Similarity=0.475 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
..++.+|+++|||++ +|||++++..|+++|++|++.++.
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 556789999999996 999999999999999999998753
No 116
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.74 E-value=3.8e-08 Score=56.04 Aligned_cols=39 Identities=33% Similarity=0.395 Sum_probs=35.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.+|.++|||++++||.++++.|+++|++|++++|+..
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467899999999999999999999999999999998754
No 117
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.74 E-value=3.1e-08 Score=57.16 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=34.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+|+++|||++++||.+++++|+++|++|++++|+....
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~ 39 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA 39 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 57899999999999999999999999999999986543
No 118
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.74 E-value=3.4e-08 Score=57.22 Aligned_cols=41 Identities=34% Similarity=0.522 Sum_probs=35.7
Q ss_pred CCCCCEEEEecCCC-hHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASR-GIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~-gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+.+++++|||+++ |||+++++.|+++|++|++++|+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~ 55 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL 55 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 35689999999985 999999999999999999999876543
No 119
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.73 E-value=3.3e-08 Score=57.58 Aligned_cols=40 Identities=28% Similarity=0.524 Sum_probs=36.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+|.++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~ 43 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDK 43 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 4678999999999999999999999999999999987543
No 120
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.73 E-value=7e-08 Score=57.08 Aligned_cols=40 Identities=45% Similarity=0.688 Sum_probs=36.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++++|+++|||++++||..++.+|+++|++|++++|+.+
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~ 81 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH 81 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3567899999999999999999999999999999998753
No 121
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.73 E-value=2.5e-08 Score=63.97 Aligned_cols=41 Identities=44% Similarity=0.705 Sum_probs=37.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
++.+|+++|||+++|||.++++.|+++|++|++++|+++..
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~ 408 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL 408 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 56789999999999999999999999999999999986543
No 122
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.73 E-value=1e-07 Score=55.11 Aligned_cols=40 Identities=28% Similarity=0.429 Sum_probs=34.1
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.++.+|.++|||++++||.++++.|+++|++|++.+++.
T Consensus 3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~ 42 (257)
T PRK12744 3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNS 42 (257)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCC
Confidence 3456789999999999999999999999999976666543
No 123
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.72 E-value=3e-08 Score=56.84 Aligned_cols=38 Identities=47% Similarity=0.788 Sum_probs=32.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEE-EecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI-AAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~-~~r~~~ 44 (66)
+.+++++|||++++||+.+++.|+++|++|++ ..|+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~ 40 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRK 40 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 45789999999999999999999999999876 456543
No 124
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.72 E-value=2.8e-08 Score=56.98 Aligned_cols=37 Identities=32% Similarity=0.567 Sum_probs=34.0
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++|||+++|||.+++++|+++|++|++.+|+++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~ 38 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDR 38 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 5789999999999999999999999999999998654
No 125
>PRK06128 oxidoreductase; Provisional
Probab=98.72 E-value=5.1e-08 Score=57.75 Aligned_cols=38 Identities=39% Similarity=0.649 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+|+++|||+++|||+++++.|+++|++|++.+++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 46789999999999999999999999999999887754
No 126
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.72 E-value=1.7e-08 Score=58.37 Aligned_cols=37 Identities=43% Similarity=0.717 Sum_probs=33.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++|||+++|||.++++.|+++|++|++++|+.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~ 38 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDA 38 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4689999999999999999999999999999987543
No 127
>PRK05855 short chain dehydrogenase; Validated
Probab=98.71 E-value=3.6e-08 Score=61.97 Aligned_cols=41 Identities=34% Similarity=0.565 Sum_probs=36.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+.+++++|||+++|||++++++|+++|++|++++|+.+..
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~ 352 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAA 352 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46678999999999999999999999999999999986543
No 128
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.71 E-value=5.7e-08 Score=55.74 Aligned_cols=39 Identities=36% Similarity=0.566 Sum_probs=36.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|.++|||++++||..++++|+++|++|++++|+.
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 557899999999999999999999999999999999876
No 129
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.71 E-value=1.2e-07 Score=51.45 Aligned_cols=33 Identities=42% Similarity=0.739 Sum_probs=29.9
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT 42 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~ 42 (66)
|+++|||+++|||++++++|+++|. .|++++|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 6899999999999999999999965 67888888
No 130
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.71 E-value=4.3e-08 Score=55.96 Aligned_cols=37 Identities=32% Similarity=0.513 Sum_probs=34.0
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+|.++|||+++|||+++++.|+++|++|++++|+.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 5789999999999999999999999999999998643
No 131
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.71 E-value=2.8e-08 Score=59.37 Aligned_cols=37 Identities=32% Similarity=0.407 Sum_probs=34.0
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
+++++|||+++|||.++++.|+++| ++|++++|+.++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~ 40 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK 40 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 6899999999999999999999999 999999997643
No 132
>PRK12742 oxidoreductase; Provisional
Probab=98.71 E-value=5.5e-08 Score=55.37 Aligned_cols=37 Identities=35% Similarity=0.602 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++.+|+++|||++++||+++++.|+++|++|++.++.
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~ 39 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG 39 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 4678999999999999999999999999999887663
No 133
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.70 E-value=6e-08 Score=56.07 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++.+|+++|||+++|||.+++++|+++|++|++.+++
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~ 43 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV 43 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 45789999999999999999999999999999988765
No 134
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.70 E-value=6.6e-08 Score=57.93 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=39.1
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|.+..++.++.++|||++|+||+.++++|+++|++|+++.|+.+
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~ 44 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE 44 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 56667778899999999999999999999999999988888754
No 135
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.70 E-value=4.7e-08 Score=56.39 Aligned_cols=41 Identities=41% Similarity=0.703 Sum_probs=36.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCe-EEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r~~~~ 45 (66)
..+++|+++|||++++||..+++.|+++|++ |++++|+.+.
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~ 43 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEK 43 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHH
Confidence 3467899999999999999999999999999 9999987543
No 136
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.70 E-value=6.3e-08 Score=55.92 Aligned_cols=39 Identities=36% Similarity=0.612 Sum_probs=34.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|+++|||+++|||.++++.|+++|++|++.+++.
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 346789999999999999999999999999998886653
No 137
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.69 E-value=4e-08 Score=56.68 Aligned_cols=41 Identities=34% Similarity=0.588 Sum_probs=36.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++++++++|||+++++|+.+++.|+++|++|++++|+.+.
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~ 47 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA 47 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34778999999999999999999999999999999997643
No 138
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.69 E-value=5.4e-08 Score=55.66 Aligned_cols=38 Identities=45% Similarity=0.584 Sum_probs=34.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+|.++|||+++++|..++++|+++|++|++++|+++.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~ 42 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDA 42 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 35789999999999999999999999999999998654
No 139
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.68 E-value=5.4e-08 Score=55.96 Aligned_cols=38 Identities=47% Similarity=0.781 Sum_probs=33.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEE-ecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~-~r~~ 43 (66)
++.++.++|||++++||.++++.|+++|+.|++. .|+.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~ 41 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK 41 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4667899999999999999999999999998775 5654
No 140
>PRK06182 short chain dehydrogenase; Validated
Probab=98.68 E-value=4.3e-08 Score=57.13 Aligned_cols=38 Identities=37% Similarity=0.470 Sum_probs=34.8
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++++|||+++|||++++++|+++|++|++++|+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~ 39 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK 39 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 56899999999999999999999999999999998653
No 141
>PRK06484 short chain dehydrogenase; Validated
Probab=98.68 E-value=2.1e-08 Score=62.90 Aligned_cols=39 Identities=38% Similarity=0.538 Sum_probs=35.7
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+|+++|||+++|||+++++.|+++|++|++++|+.+.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 305 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG 305 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 468999999999999999999999999999999997543
No 142
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.68 E-value=5e-08 Score=55.65 Aligned_cols=39 Identities=38% Similarity=0.508 Sum_probs=35.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++++++++|||++++||..+++.|+++|+.|++.+|+.+
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~ 41 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVE 41 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 567899999999999999999999999999988887754
No 143
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.68 E-value=4.3e-08 Score=57.18 Aligned_cols=36 Identities=39% Similarity=0.683 Sum_probs=32.6
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++|||+++|||.++++.|+++|++|++++|+.+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~ 36 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG 36 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 468999999999999999999999999999987643
No 144
>PRK06484 short chain dehydrogenase; Validated
Probab=98.67 E-value=4.5e-08 Score=61.47 Aligned_cols=40 Identities=30% Similarity=0.555 Sum_probs=36.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.++|+++|||+++|||.++++.|+++|++|++++|+.+.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 42 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA 42 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4689999999999999999999999999999999976543
No 145
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.67 E-value=5.8e-08 Score=56.53 Aligned_cols=36 Identities=39% Similarity=0.632 Sum_probs=32.8
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~ 36 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG 36 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 468999999999999999999999999999987654
No 146
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.67 E-value=5.6e-08 Score=56.86 Aligned_cols=37 Identities=35% Similarity=0.456 Sum_probs=34.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.++|||++++||++++++|+++|++|++++|+.+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~ 39 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA 39 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHH
Confidence 4688999999999999999999999999999999754
No 147
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.66 E-value=3.5e-07 Score=53.01 Aligned_cols=38 Identities=37% Similarity=0.496 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++++|.++|||++ +|||.+++++|+++|++|+++++.
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~ 41 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWT 41 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecc
Confidence 46889999999998 499999999999999999988654
No 148
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.66 E-value=6.4e-08 Score=60.11 Aligned_cols=41 Identities=29% Similarity=0.451 Sum_probs=36.7
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+++|.++|||+++|||++++++|+++|++|++++|+.++
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~ 214 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK 214 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 35678999999999999999999999999999999987643
No 149
>KOG1200|consensus
Probab=98.66 E-value=3.4e-08 Score=56.66 Aligned_cols=41 Identities=37% Similarity=0.473 Sum_probs=36.8
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
+..|.+++||+++|||++++..|+.+|++|.+++++....+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ 52 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAE 52 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHH
Confidence 56789999999999999999999999999999999876543
No 150
>PRK12743 oxidoreductase; Provisional
Probab=98.65 E-value=1.1e-07 Score=54.96 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=31.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+|+++|||++++||.++++.|+++|++|+++++..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~ 36 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSD 36 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 57899999999999999999999999998886643
No 151
>PRK09135 pteridine reductase; Provisional
Probab=98.65 E-value=1e-07 Score=54.40 Aligned_cols=37 Identities=32% Similarity=0.369 Sum_probs=33.9
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.+++++|||++++||+.++++|+++|++|++++|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4568999999999999999999999999999999864
No 152
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.65 E-value=9.1e-08 Score=54.56 Aligned_cols=40 Identities=53% Similarity=0.683 Sum_probs=35.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEE-ecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~-~r~~~~ 45 (66)
++.+++++|||++++||..+++.|+++|++|++. +|+.+.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~ 42 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEA 42 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 4567899999999999999999999999999988 887543
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.65 E-value=5.4e-08 Score=56.98 Aligned_cols=37 Identities=32% Similarity=0.443 Sum_probs=34.2
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++|||+++|||.++++.|+++|++|++++|+.+.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~ 40 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED 40 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 5789999999999999999999999999999998653
No 154
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.65 E-value=1e-07 Score=54.75 Aligned_cols=40 Identities=50% Similarity=0.767 Sum_probs=35.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.++.++|||+++|||+++++.|+++|+.|+++.++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~ 41 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEE 41 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 4678999999999999999999999999998888887654
No 155
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.65 E-value=1.1e-07 Score=54.03 Aligned_cols=38 Identities=37% Similarity=0.579 Sum_probs=34.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+|.++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46889999999999999999999999999999997644
No 156
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.64 E-value=1.5e-07 Score=53.94 Aligned_cols=37 Identities=41% Similarity=0.738 Sum_probs=32.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+.+++++|||++++||..++++|+++|++|++..+.
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~ 39 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS 39 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 3568999999999999999999999999999876543
No 157
>KOG1502|consensus
Probab=98.64 E-value=1.1e-07 Score=57.71 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=36.4
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+.|||++|.||.++++.|+++||+|+.+.|+++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~ 42 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED 42 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch
Confidence 67899999999999999999999999999999999887
No 158
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.1e-07 Score=55.70 Aligned_cols=38 Identities=32% Similarity=0.483 Sum_probs=34.4
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+..|+++|||++++||+++++.|+++|+.|++.+|+.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~ 45 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVE 45 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45689999999999999999999999999999988654
No 159
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.63 E-value=1.3e-07 Score=54.27 Aligned_cols=37 Identities=41% Similarity=0.681 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+.+|+++|||++++||+++++.|+++|++|++.+++
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC
Confidence 3467899999999999999999999999999887653
No 160
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.63 E-value=1.2e-07 Score=56.88 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=36.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+.+++.++|||++|+||..++++|+++|++|++++|..+
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4677899999999999999999999999999999988653
No 161
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.62 E-value=8.4e-08 Score=55.47 Aligned_cols=37 Identities=46% Similarity=0.793 Sum_probs=33.4
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++|||++++||..+++.|+++|++|++++|++..
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~ 37 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETR 37 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3679999999999999999999999999999998643
No 162
>KOG1209|consensus
Probab=98.61 E-value=1.9e-07 Score=54.36 Aligned_cols=42 Identities=36% Similarity=0.524 Sum_probs=36.3
Q ss_pred CCCEEEEecCC-ChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 8 SGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 8 ~~~~~~vtg~~-~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
..|.++|||++ ||||.+++++|++.|+.|+.+.|+.+..+++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L 48 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL 48 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH
Confidence 46889999877 7999999999999999999999987765543
No 163
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.61 E-value=9e-08 Score=55.07 Aligned_cols=37 Identities=38% Similarity=0.669 Sum_probs=33.5
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++|||++++||+.+++.|+++|++|++++|+...
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~ 38 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQ 38 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4689999999999999999999999999999997543
No 164
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.61 E-value=9.1e-08 Score=54.87 Aligned_cols=37 Identities=46% Similarity=0.619 Sum_probs=33.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++|||+++++|+.+++.|+++|++|++++|+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~ 37 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAG 37 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4689999999999999999999999999999998643
No 165
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.61 E-value=3.1e-07 Score=52.42 Aligned_cols=37 Identities=38% Similarity=0.692 Sum_probs=33.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.++.++|||++++||..+++.|+++|++|++.+|..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHP 40 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcc
Confidence 5578999999999999999999999999999977643
No 166
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.60 E-value=1.2e-07 Score=54.37 Aligned_cols=34 Identities=32% Similarity=0.564 Sum_probs=30.8
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEe
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~ 40 (66)
+++|+++|||++++||+.+++.|+++|++|++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~ 34 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC 34 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence 4679999999999999999999999999988754
No 167
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.60 E-value=2.8e-07 Score=53.33 Aligned_cols=37 Identities=32% Similarity=0.488 Sum_probs=33.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
...+|.++|||++++||+.+++.|+++|++|+++++.
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~ 42 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR 42 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467899999999999999999999999999887664
No 168
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.59 E-value=4.9e-08 Score=56.44 Aligned_cols=36 Identities=39% Similarity=0.481 Sum_probs=33.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
|.++|||++++||.+++++|+++|++|++++|+.+.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~ 37 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG 37 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 679999999999999999999999999999987654
No 169
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.59 E-value=1.9e-07 Score=53.13 Aligned_cols=39 Identities=51% Similarity=0.756 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.++.++|||+++++|..+++.|+++|++|++..|+..
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 356789999999999999999999999999988877654
No 170
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.7e-07 Score=53.55 Aligned_cols=38 Identities=42% Similarity=0.573 Sum_probs=34.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+++++.++|||++++||+.+++.|+++|++|+++.++.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 45789999999999999999999999999998887654
No 171
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.1e-07 Score=54.88 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++++|||++++||..++..|+++|++|++++|+.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~ 38 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA 38 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4789999999999999999999999999999998654
No 172
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.59 E-value=2.7e-07 Score=53.79 Aligned_cols=37 Identities=32% Similarity=0.467 Sum_probs=32.7
Q ss_pred CCCCCEEEEecC--CChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~--~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+.+|+++|||+ ++|||++++++|++.|++|++++|.
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 467899999996 6899999999999999999988654
No 173
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.5e-07 Score=53.99 Aligned_cols=36 Identities=36% Similarity=0.620 Sum_probs=33.1
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++|||+++|||.++++.|+++|++|++++|+++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~ 37 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV 37 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 679999999999999999999999999999997643
No 174
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.57 E-value=1.4e-07 Score=55.06 Aligned_cols=38 Identities=37% Similarity=0.518 Sum_probs=34.4
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++|||++++||+.++++|+++|++|++.+|+.+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~ 39 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTAT 39 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 46789999999999999999999999999999998643
No 175
>PRK08324 short chain dehydrogenase; Validated
Probab=98.57 E-value=1.4e-07 Score=61.46 Aligned_cols=41 Identities=41% Similarity=0.593 Sum_probs=37.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+.+++++|||++++||..+++.|+++|++|++++|+.+.
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~ 458 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA 458 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999998654
No 176
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.57 E-value=2.5e-07 Score=53.00 Aligned_cols=37 Identities=43% Similarity=0.755 Sum_probs=32.9
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++.+++++|||++++||+.++++|+++|++|++..++
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567999999999999999999999999998877654
No 177
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.9e-07 Score=53.67 Aligned_cols=34 Identities=32% Similarity=0.584 Sum_probs=32.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
|.++|||++++||++++++|+++|++|++++|+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 6899999999999999999999999999999976
No 178
>PLN02583 cinnamoyl-CoA reductase
Probab=98.56 E-value=2.6e-07 Score=54.79 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=34.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+-+++.++|||++|+||+.++.+|+++|++|+++.|+.
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 34578999999999999999999999999999998864
No 179
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.56 E-value=2.2e-07 Score=52.87 Aligned_cols=37 Identities=24% Similarity=0.414 Sum_probs=34.1
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+.++|||+++++|.++++.|+++|++|++++|+++..
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~ 38 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD 38 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 6799999999999999999999999999999987653
No 180
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.55 E-value=1.5e-07 Score=54.53 Aligned_cols=36 Identities=42% Similarity=0.672 Sum_probs=32.1
Q ss_pred EEEEecCCChHHHHHHHHHHh----CCCeEEEEecCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAK----DGANIVIAAKTAEPH 46 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~----~g~~v~~~~r~~~~~ 46 (66)
+++|||+++|||.+++++|++ .|++|++++|+.+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~ 41 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL 41 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH
Confidence 589999999999999999997 799999999986543
No 181
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.55 E-value=3e-07 Score=55.46 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=35.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++++.++|||++|+||.++++.|+++|++|++++|+...
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~ 40 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT 40 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 357899999999999999999999999999999987654
No 182
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.55 E-value=2e-07 Score=60.05 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=37.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
...+++++|||++|+||+.++++|+++|++|++++|+.++..
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~ 118 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAE 118 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 356899999999999999999999999999999999876543
No 183
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.54 E-value=4.5e-07 Score=52.14 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=32.4
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.|+++|||++++||.++++.|+++|++|++++|+.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 37899999999999999999999999999999864
No 184
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.54 E-value=2e-07 Score=53.52 Aligned_cols=35 Identities=40% Similarity=0.620 Sum_probs=32.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|+++|||++++||..+++.|+++|++|++++|+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~ 35 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE 35 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57999999999999999999999999999998754
No 185
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.52 E-value=3.3e-07 Score=53.36 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=30.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++++|||+++|||++++++|+++|++|++++|.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 579999999999999999999999999987654
No 186
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.52 E-value=3e-07 Score=53.09 Aligned_cols=37 Identities=35% Similarity=0.496 Sum_probs=33.8
Q ss_pred CCCCCEEEEecCCC--hHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~--gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++.+|.++|||+++ |||..+++.|+++|++|++++|+
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 45789999999984 89999999999999999999987
No 187
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.51 E-value=3.1e-07 Score=53.60 Aligned_cols=35 Identities=37% Similarity=0.524 Sum_probs=32.7
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|+++|||+++|||+.+++.|+++|++|++++|+.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~ 36 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAE 36 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 68999999999999999999999999999999754
No 188
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.51 E-value=3.5e-07 Score=54.45 Aligned_cols=39 Identities=23% Similarity=0.212 Sum_probs=35.0
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+|+++|||++++||+.++++|+++|++|+++.|+....
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 478999999999999999999999999999888886543
No 189
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.50 E-value=2.1e-07 Score=53.61 Aligned_cols=36 Identities=22% Similarity=0.567 Sum_probs=32.6
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.++|||+++++|.++++.|+++|++|++++|+++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~ 36 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER 36 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 368999999999999999999999999999998653
No 190
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.5e-07 Score=52.45 Aligned_cols=34 Identities=29% Similarity=0.501 Sum_probs=31.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++|||++++||..++++|+++|++|++++|+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 6999999999999999999999999999998754
No 191
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.49 E-value=5.8e-07 Score=53.54 Aligned_cols=40 Identities=20% Similarity=0.143 Sum_probs=35.7
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+++.++|||++|+||..++.+|+++|++|+++.|+....
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR 42 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch
Confidence 4578999999999999999999999999999888876543
No 192
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=5.1e-07 Score=51.34 Aligned_cols=37 Identities=43% Similarity=0.794 Sum_probs=32.5
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+..+.++|||+++++|..++..|+++|++|++..++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4568999999999999999999999999988866654
No 193
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.48 E-value=4.5e-07 Score=56.67 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
....++.++|||++|+||+.++++|+++|++|+++++
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 3467899999999999999999999999999999875
No 194
>PRK08017 oxidoreductase; Provisional
Probab=98.48 E-value=2.2e-07 Score=53.43 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=33.8
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
+.++|||++++||.++++.|+++|++|++++|+.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~ 39 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV 39 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh
Confidence 6799999999999999999999999999999986543
No 195
>PLN02686 cinnamoyl-CoA reductase
Probab=98.47 E-value=5.8e-07 Score=54.87 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=35.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+..+|.++|||++++||..++++|+++|++|+++.|+.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~ 87 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQ 87 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456789999999999999999999999999998887764
No 196
>PRK07069 short chain dehydrogenase; Validated
Probab=98.46 E-value=5.3e-07 Score=51.65 Aligned_cols=31 Identities=42% Similarity=0.732 Sum_probs=29.9
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++|||++++||..+++.|+++|++|++++|+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999999999999999999997
No 197
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.45 E-value=2.4e-07 Score=52.92 Aligned_cols=35 Identities=20% Similarity=0.475 Sum_probs=31.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|||+++|||+++++.|+++|++|++++|+.++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~ 36 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD 36 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 48999999999999999999999999999997544
No 198
>KOG1207|consensus
Probab=98.45 E-value=2.7e-07 Score=52.36 Aligned_cols=43 Identities=37% Similarity=0.619 Sum_probs=39.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++.|+.+++||+..|||++++..|+..|++|+.+.|+++.+.
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~ 45 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLL 45 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHH
Confidence 3567999999999999999999999999999999999987765
No 199
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4e-07 Score=53.42 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=31.0
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.|+++|||+ +|||+++++.|+ +|++|++++|+.+..
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~ 37 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENL 37 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHH
Confidence 578999997 699999999997 799999999976543
No 200
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.45 E-value=5.6e-07 Score=53.39 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=34.3
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++|||++|.||+.++++|+++|++|++++|+...
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 46889999999999999999999999999998887653
No 201
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.42 E-value=3.4e-07 Score=52.00 Aligned_cols=36 Identities=36% Similarity=0.596 Sum_probs=33.0
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.++|||++++||+.++++|+++|++|++++|+.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~ 37 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA 37 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH
Confidence 579999999999999999999999999999998654
No 202
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.42 E-value=7.3e-07 Score=53.60 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=32.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
|+++|||++|+||..++++|+..|++|++++|+.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999999999999999999999999999998754
No 203
>KOG1199|consensus
Probab=98.42 E-value=8.3e-07 Score=50.41 Aligned_cols=47 Identities=30% Similarity=0.451 Sum_probs=41.4
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
|+...+.++-+.++||+.+|+|++.+++|+.+|++|++.|...++..
T Consensus 1 ~sa~rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~ 47 (260)
T KOG1199|consen 1 MSALRSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA 47 (260)
T ss_pred CchhhhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch
Confidence 44456678889999999999999999999999999999999887765
No 204
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.41 E-value=8.6e-07 Score=51.71 Aligned_cols=36 Identities=28% Similarity=0.519 Sum_probs=32.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.|+++|||++++||+.++.+|+++|++|++.+|+.+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~ 37 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPD 37 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999999999999999988754
No 205
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.40 E-value=7.4e-07 Score=51.04 Aligned_cols=34 Identities=44% Similarity=0.556 Sum_probs=30.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
+++++|||++++||..++++|+++|++|++.+++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~ 35 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR 35 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4689999999999999999999999998887654
No 206
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.37 E-value=9.2e-07 Score=50.36 Aligned_cols=32 Identities=34% Similarity=0.514 Sum_probs=30.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
|+++|||+++++|..+++.|+++|++|+++.|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 57999999999999999999999999998887
No 207
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.37 E-value=9.4e-07 Score=50.46 Aligned_cols=34 Identities=35% Similarity=0.607 Sum_probs=29.7
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEE-ecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIA-AKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~-~r~~ 43 (66)
++++|||++++||..+++.|+++|++|++. .|+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~ 36 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL 36 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh
Confidence 579999999999999999999999998774 4543
No 208
>PLN02240 UDP-glucose 4-epimerase
Probab=98.37 E-value=1.7e-06 Score=51.94 Aligned_cols=38 Identities=29% Similarity=0.417 Sum_probs=33.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.++.++|||+++++|..+++.|+++|++|++++|..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~ 39 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLD 39 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35578999999999999999999999999999988643
No 209
>PLN02650 dihydroflavonol-4-reductase
Probab=98.36 E-value=1.2e-06 Score=52.90 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=34.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
..+.++|||++|.||..++++|+++|++|++++|+.+..
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~ 42 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV 42 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh
Confidence 457899999999999999999999999999998876543
No 210
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.36 E-value=1.7e-06 Score=49.57 Aligned_cols=33 Identities=45% Similarity=0.577 Sum_probs=29.7
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
.|+++|||++++||..+++.|+++|++|+++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~ 34 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYA 34 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 368999999999999999999999999987654
No 211
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.35 E-value=1.5e-06 Score=49.62 Aligned_cols=34 Identities=35% Similarity=0.523 Sum_probs=32.1
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
|+++|||+++++|..+++.|+++|++|++.+|+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 6899999999999999999999999999999885
No 212
>PLN02214 cinnamoyl-CoA reductase
Probab=98.35 E-value=1.5e-06 Score=52.51 Aligned_cols=39 Identities=21% Similarity=0.220 Sum_probs=35.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+++.++|||++|+||+.++.+|+++|++|++++|+.+.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 457889999999999999999999999999999987653
No 213
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.34 E-value=1.2e-06 Score=52.59 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=33.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCC--CeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 44 (66)
+++|.++|||++++||+.+++.|+++| ++|++.+|+..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~ 41 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDEL 41 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChh
Confidence 357899999999999999999999986 78998888754
No 214
>PLN00015 protochlorophyllide reductase
Probab=98.32 E-value=5e-07 Score=53.83 Aligned_cols=33 Identities=39% Similarity=0.502 Sum_probs=29.9
Q ss_pred EEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 13 FITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
+|||+++|||.++++.|+++| ++|++++|+.+.
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~ 34 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK 34 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 589999999999999999999 999999997543
No 215
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.32 E-value=1.8e-06 Score=52.16 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=34.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..++.++|||++|+||..++++|+++|++|++++|+.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~ 45 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA 45 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 45788999999999999999999999999999888754
No 216
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=2.3e-06 Score=53.20 Aligned_cols=37 Identities=46% Similarity=0.656 Sum_probs=34.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+.+++++|||+++|||..+++.|+++|++|+++++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3568999999999999999999999999999999874
No 217
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.31 E-value=1.7e-06 Score=49.41 Aligned_cols=32 Identities=47% Similarity=0.754 Sum_probs=29.2
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++|||++++||..+++.|+++|++|+++++..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~ 32 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG 32 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 48999999999999999999999999988754
No 218
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.30 E-value=1.5e-06 Score=50.30 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=34.5
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..++.++|||++|++|+.++++|+.+|++|++..|+.++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~ 53 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK 53 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 456899999999999999999999999999998887543
No 219
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.29 E-value=2e-06 Score=48.41 Aligned_cols=42 Identities=26% Similarity=0.474 Sum_probs=37.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
+++++.++++|+++++|+.++..|++.|++|++++|+.++.+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~ 66 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQ 66 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 567899999999999999999999999999999999866544
No 220
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.29 E-value=2.9e-06 Score=51.32 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=34.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+..+.++|||++|.||..++++|.++|++|++++|...
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 456789999999999999999999999999999988543
No 221
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.27 E-value=3.3e-06 Score=52.08 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=35.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..++.++|||++|.||+.++++|+++|++|++++|+.+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 457889999999999999999999999999999998643
No 222
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.26 E-value=9.2e-07 Score=50.21 Aligned_cols=33 Identities=36% Similarity=0.627 Sum_probs=30.1
Q ss_pred EEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 13 FITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+|||++++||+.+++.|+++|++|++++|+.+.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~ 33 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR 33 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 589999999999999999999999999997543
No 223
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.23 E-value=8.6e-06 Score=43.83 Aligned_cols=37 Identities=30% Similarity=0.426 Sum_probs=31.5
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH 46 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~ 46 (66)
+.++++|+++++|.++++.|+++|+ .|++..|+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~ 38 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA 38 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC
Confidence 4689999999999999999999996 588888876543
No 224
>KOG1610|consensus
Probab=98.23 E-value=5.9e-06 Score=50.03 Aligned_cols=42 Identities=31% Similarity=0.460 Sum_probs=37.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+...|.++|||+.+|+|+.+|.+|.++|+.|++.+.+++..
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga 66 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA 66 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH
Confidence 356789999999999999999999999999999998765553
No 225
>PLN02778 3,5-epimerase/4-reductase
Probab=98.23 E-value=8.3e-06 Score=48.64 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=31.7
Q ss_pred CCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 3 ~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
..+.-..+.++|||++|.||..++++|.++|++|+....
T Consensus 3 ~~~~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~ 41 (298)
T PLN02778 3 GTAGSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG 41 (298)
T ss_pred CCCCCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC
Confidence 334444578999999999999999999999999876533
No 226
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.7e-06 Score=47.45 Aligned_cols=36 Identities=44% Similarity=0.593 Sum_probs=32.7
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.|.++|||+++++|..+++.|+++ ++|++++|+.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~ 38 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER 38 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH
Confidence 478999999999999999999999 999999998644
No 227
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.21 E-value=4.1e-06 Score=53.95 Aligned_cols=42 Identities=21% Similarity=0.340 Sum_probs=37.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
.+.+|+++|||++|.||.++|+++++.+ .++++.++++.+..
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~ 289 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLY 289 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHH
Confidence 3579999999999999999999999987 56889999887765
No 228
>KOG4169|consensus
Probab=98.18 E-value=4.2e-06 Score=49.01 Aligned_cols=40 Identities=25% Similarity=0.484 Sum_probs=34.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++||.+++||+.+|||++++++|+.+|..+.+.+.+.+.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En 41 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN 41 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC
Confidence 5789999999999999999999999999887776665554
No 229
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.18 E-value=4.3e-06 Score=47.47 Aligned_cols=32 Identities=56% Similarity=0.931 Sum_probs=29.7
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++|||++++||..+++.|+++|++|++++|+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 47999999999999999999999999998875
No 230
>PLN02427 UDP-apiose/xylose synthase
Probab=98.17 E-value=5.8e-06 Score=50.55 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhC-CCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r~~~ 44 (66)
+.+.++++|||++|.||+.+++.|+++ |++|++++|+.+
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~ 50 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYND 50 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCch
Confidence 345678999999999999999999998 589999988653
No 231
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.16 E-value=5.7e-06 Score=48.98 Aligned_cols=35 Identities=17% Similarity=0.377 Sum_probs=32.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|||++|++|..+++.|+++|++|++++|+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 58999999999999999999999999999997654
No 232
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.15 E-value=6.4e-06 Score=49.19 Aligned_cols=37 Identities=32% Similarity=0.473 Sum_probs=33.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCe-EEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r~~ 43 (66)
++.+|.++|+|+ +|+|++++..|+..|++ |++++|+.
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 456899999998 69999999999999986 99999986
No 233
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.14 E-value=5.2e-06 Score=49.62 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=32.1
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|||++|.+|+.++++|.++|++|++.+|+.+.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~ 36 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK 36 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH
Confidence 58999999999999999999999999999998543
No 234
>KOG1478|consensus
Probab=98.14 E-value=5.5e-06 Score=49.41 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=33.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCC-----eEEEEecCCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGA-----NIVIAAKTAEPHP 47 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~-----~v~~~~r~~~~~~ 47 (66)
.|+++|||+++|+|.++|.+|.+... ++++++|+.++.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae 46 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE 46 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH
Confidence 58999999999999999999998653 4788999988876
No 235
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.13 E-value=5.8e-06 Score=48.24 Aligned_cols=36 Identities=31% Similarity=0.545 Sum_probs=32.6
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++|||++|.||..+++.|++.|++|++.+|+.....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 36 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA 36 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC
Confidence 589999999999999999999999999999876643
No 236
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.11 E-value=9.4e-06 Score=50.55 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=34.4
Q ss_pred CCCCCCEEEEecC----------------CChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~----------------~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.+|.++|||+ +|.+|.+++++|+.+|++|++++++.
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~ 238 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV 238 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc
Confidence 4578999999999 45599999999999999999998864
No 237
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.11 E-value=9.6e-06 Score=49.64 Aligned_cols=36 Identities=31% Similarity=0.325 Sum_probs=33.1
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.++|||++|.||+.++..|.++|++|++++|..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 568899999999999999999999999999999854
No 238
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.10 E-value=9.9e-06 Score=45.30 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=30.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++|||+++|||.++++.|+++ ++|++.+|+..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~ 34 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG 34 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC
Confidence 5899999999999999999999 99999999764
No 239
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.08 E-value=9.2e-06 Score=44.78 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=32.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++|+|++|.+|+.++++|.++|++|++..|++++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~ 34 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSK 34 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGG
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchh
Confidence 6899999999999999999999999999999775
No 240
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.07 E-value=1.1e-05 Score=50.67 Aligned_cols=35 Identities=17% Similarity=0.422 Sum_probs=32.3
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++.++|||++|.||+.++.+|.++|++|+++++.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 46889999999999999999999999999998865
No 241
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.07 E-value=1.1e-05 Score=47.42 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=31.9
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++|||++|.+|+.++++|.++|++|++..|++++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 7899999999999999999999999999998764
No 242
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.06 E-value=1.5e-05 Score=46.91 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=32.3
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
++|||++|.||..++.+|.++|++|+.++|.....
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL 37 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc
Confidence 89999999999999999999999999999976553
No 243
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.05 E-value=1.4e-05 Score=45.49 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=28.1
Q ss_pred CEEEEecCCChHHHHHHHHHHhCC--CeEEEEecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~ 43 (66)
+.++|||+++|||++++++|++++ ..|++.+|+.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~ 36 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHH 36 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCC
Confidence 468999999999999999999985 5666666654
No 244
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.04 E-value=1.5e-05 Score=49.95 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=32.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.+.++|||++|.||+.++++|.++|++|++++|..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357799999999999999999999999999998753
No 245
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.98 E-value=2.5e-05 Score=46.72 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=29.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++|||++++||..+++.|+++|++|++++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Confidence 58999999999999999999999999988764
No 246
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.94 E-value=5.4e-06 Score=49.83 Aligned_cols=36 Identities=17% Similarity=0.381 Sum_probs=30.9
Q ss_pred EEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
++|||++|.||+.+|+++++.+ ..++++++++..+-
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~ 37 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLY 37 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHH
Confidence 6899999999999999999987 57999999976544
No 247
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.93 E-value=6.5e-06 Score=47.30 Aligned_cols=28 Identities=43% Similarity=0.732 Sum_probs=26.1
Q ss_pred CChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 18 SRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 18 ~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++|||++++++|+++|++|++++|+.++
T Consensus 5 s~GiG~aia~~l~~~Ga~V~~~~~~~~~ 32 (241)
T PF13561_consen 5 SSGIGRAIARALAEEGANVILTDRNEEK 32 (241)
T ss_dssp TSHHHHHHHHHHHHTTEEEEEEESSHHH
T ss_pred CCChHHHHHHHHHHCCCEEEEEeCChHH
Confidence 3999999999999999999999999875
No 248
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=97.93 E-value=7.2e-05 Score=41.76 Aligned_cols=33 Identities=27% Similarity=0.541 Sum_probs=30.0
Q ss_pred EEEEecCCChHHHHHHHHHHhCC-CeEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDG-ANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~ 43 (66)
+++|||+.++||..+++.|+.++ .+|+++.|+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~ 35 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSG 35 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSG
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCC
Confidence 58999999999999999999987 4799999984
No 249
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.93 E-value=6.1e-05 Score=46.95 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=33.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+|.++|+|+++ +|.++++.|++.|++|++.+++...
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~ 40 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFS 40 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCcc
Confidence 35789999999975 9999999999999999999876543
No 250
>KOG1210|consensus
Probab=97.91 E-value=1.6e-05 Score=48.22 Aligned_cols=38 Identities=37% Similarity=0.647 Sum_probs=35.5
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
+.+++||+++|+|.+++.++...|+.|.++.|+.+++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~ 71 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLL 71 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHH
Confidence 68999999999999999999999999999999987765
No 251
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.90 E-value=3.1e-05 Score=50.56 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=33.0
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhC-CCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r~~~ 44 (66)
+++.++|||++|.||+.++++|+++ |++|+.++|...
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~ 351 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD 351 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence 4678999999999999999999985 799999998664
No 252
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.90 E-value=1.9e-05 Score=45.66 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=33.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++|||+++.+|..++.+|..+|++|.+..|+++...
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~ 38 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA 38 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH
Confidence 5899999999999999999999999999999976654
No 253
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.88 E-value=3.6e-05 Score=45.61 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=27.4
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++|||++|.||+.++++|+++|+.++++.++.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 78999999999999999999998766655543
No 254
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.88 E-value=3.5e-05 Score=46.70 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=32.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.++|||+.|.||+.++.+|++.|++|++.|.-...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g 36 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNG 36 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCC
Confidence 368999999999999999999999999999876544
No 255
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.88 E-value=3e-05 Score=46.27 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=30.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CeEEEEecCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAE 44 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 44 (66)
+++|||++|++|..+++.|+++| ++|++..|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 37899999999999999999998 77999998765
No 256
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.87 E-value=3.9e-05 Score=47.86 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCCEEEEecCCChHHHH--HHHHHHhCCCeEEEEecC
Q psy6114 8 SGLTIFITGASRGIGKA--IALKAAKDGANIVIAAKT 42 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~--~~~~l~~~g~~v~~~~r~ 42 (66)
-+|+++|||+++|+|.+ ++..| ..|++|+++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecC
Confidence 46999999999999999 89999 999998888753
No 257
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.85 E-value=2.7e-05 Score=41.84 Aligned_cols=42 Identities=36% Similarity=0.538 Sum_probs=36.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCe-EEEEecCCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHP 47 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~ 47 (66)
.+++++.+++.|+ ||.++.++..|...|++ |+++.|+.++.+
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~ 50 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAE 50 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHH
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 3678999999986 99999999999999977 999999876655
No 258
>PLN00016 RNA-binding protein; Provisional
Probab=97.83 E-value=4.1e-05 Score=46.88 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=34.0
Q ss_pred CCEEEEe----cCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFIT----GASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vt----g~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.++|| |++|.||..+++.|+++|++|++++|+...
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 4679999 999999999999999999999999998654
No 259
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.83 E-value=5.3e-05 Score=45.68 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=27.9
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEE-EEecC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIV-IAAKT 42 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~-~~~r~ 42 (66)
+.++|||++|+||..+++.|.++|+.++ +.++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~ 35 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL 35 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence 5799999999999999999999998754 45543
No 260
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.81 E-value=6.9e-05 Score=46.68 Aligned_cols=39 Identities=33% Similarity=0.513 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecC---------------CCh-HHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGA---------------SRG-IGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~---------------~~g-ig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.++.++|||+ |+| +|.+++++|..+|++|+++++..
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~ 235 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPV 235 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 3578999999998 556 99999999999999999987654
No 261
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.81 E-value=4.9e-05 Score=55.78 Aligned_cols=35 Identities=29% Similarity=0.491 Sum_probs=32.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhC-CCeEEEEecC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKT 42 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r~ 42 (66)
++++++|||+++|||.+++.+|+++ |++|++++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 5789999999999999999999987 6999999998
No 262
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.80 E-value=7.6e-05 Score=42.26 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=30.3
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++|||++|.+|..++++|.++|+.|+...|....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~ 34 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS 34 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccc
Confidence 6899999999999999999999998877776654
No 263
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.79 E-value=6.5e-05 Score=45.32 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=30.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhC-CCeEEEEecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKD-GANIVIAAKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r~~ 43 (66)
+.++|||++|.||+.++..|+++ |++|+..+|+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~ 36 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT 36 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH
Confidence 46999999999999999999986 69999998864
No 264
>KOG1371|consensus
Probab=97.78 E-value=4.1e-05 Score=46.71 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=32.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++|||++|.||.+++.+|..+|+.|+++|.-...
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~ 38 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNS 38 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEeccccc
Confidence 5789999999999999999999999999999764433
No 265
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.78 E-value=8.6e-05 Score=41.66 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=29.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|||++ |++..++..|++.|++|++++|+.+.
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~ 35 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVK 35 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHH
Confidence 58999998 77778999999999999999987543
No 266
>PRK09620 hypothetical protein; Provisional
Probab=97.78 E-value=9.6e-05 Score=43.07 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCCCEEEEecCC----------------ChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 7 LSGLTIFITGAS----------------RGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 7 ~~~~~~~vtg~~----------------~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
+.|+.++||+|. |.+|.+++++|..+|++|++++..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468899999765 899999999999999999988763
No 267
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.78 E-value=5.5e-05 Score=44.27 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=30.7
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++|||++|.+|..++++|.+.|++|++++|....
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d 35 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSSQLD 35 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccC
Confidence 7899999999999999999999999999887433
No 268
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.78 E-value=8.6e-05 Score=46.30 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.+|.++|+|+++ +|.++++.|+..|++|++++++.
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 56789999999866 99999999999999999998875
No 269
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.76 E-value=3.2e-05 Score=45.91 Aligned_cols=43 Identities=37% Similarity=0.516 Sum_probs=36.9
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCCCc
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKL 49 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~ 49 (66)
++.++.++|+|+ ||+|++++..|...| .+|++++|+.++.+.+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l 163 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEEL 163 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 467889999986 899999999999999 7899999997765533
No 270
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.72 E-value=4.5e-05 Score=46.77 Aligned_cols=43 Identities=28% Similarity=0.421 Sum_probs=36.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhC-C-CeEEEEecCCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKD-G-ANIVIAAKTAEPHPK 48 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~-g-~~v~~~~r~~~~~~~ 48 (66)
++.++.++|||++|.||..+++.|+.+ | .+++++.|+..++..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~ 196 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE 196 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH
Confidence 578899999999999999999999854 5 589999998665543
No 271
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.72 E-value=9.4e-05 Score=43.64 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=28.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++|||+++.+|..+++.|.++|++|++.++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~ 32 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNL 32 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 37899999999999999999999999887653
No 272
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.70 E-value=7.8e-05 Score=44.36 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++|||++|.||+.++++|.++| +|+.++|..
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~ 33 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS 33 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence 59999999999999999999999 788888764
No 273
>KOG1611|consensus
Probab=97.70 E-value=0.00011 Score=43.05 Aligned_cols=38 Identities=42% Similarity=0.704 Sum_probs=29.3
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhC-CCeEEE-EecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKD-GANIVI-AAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~-~~r~~~~ 45 (66)
..+.++|||+.+|||..++++|... |-.+++ .+|++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~ 41 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEK 41 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHH
Confidence 4567999999999999999999964 555554 5555655
No 274
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.70 E-value=6.4e-05 Score=48.32 Aligned_cols=41 Identities=41% Similarity=0.580 Sum_probs=35.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++.+|.++|+|+ +|+|++++..|++.|++|++++|+.++.+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~ 416 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAK 416 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 467899999998 69999999999999999999999865544
No 275
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.69 E-value=7.4e-05 Score=44.86 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=32.9
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
+++||++|-||++++.+|...|++|++..|++.+..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~ 36 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS 36 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence 479999999999999999999999999999987654
No 276
>KOG1429|consensus
Probab=97.64 E-value=0.00017 Score=43.70 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+..++|||++|.||+.++..|...|+.|+++|--.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~f 61 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYF 61 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccc
Confidence 4568899999999999999999999999999887643
No 277
>PRK12320 hypothetical protein; Provisional
Probab=97.63 E-value=0.00015 Score=48.13 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=31.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++|||++|.||..++.+|.++|++|++.+|...
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~ 35 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH 35 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 5899999999999999999999999999998643
No 278
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.60 E-value=0.00015 Score=42.84 Aligned_cols=40 Identities=30% Similarity=0.454 Sum_probs=34.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
..++.++++|+ +|+|++++..|+..|++|++++|+.++.+
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~ 154 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE 154 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 35788999998 69999999999999999999999876554
No 279
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.60 E-value=0.00014 Score=41.44 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..++.++.+.|.|.+ .+|..+++.|.+.|++|++.+++++.
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEA 63 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 346889999999984 89999999999999999999887644
No 280
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.59 E-value=0.00022 Score=46.60 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=31.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhC--CCeEEEEecC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKD--GANIVIAAKT 42 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~--g~~v~~~~r~ 42 (66)
.+++.++|||++|.||+.++.+|.++ +++|++.++.
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~ 41 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL 41 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 45689999999999999999999987 6788888874
No 281
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=97.59 E-value=0.0001 Score=43.86 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=29.4
Q ss_pred EEecCCChHHHHHHHHHHhCC--CeEEEEecCCCC
Q psy6114 13 FITGASRGIGKAIALKAAKDG--ANIVIAAKTAEP 45 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~~ 45 (66)
+|||++|.+|..++++|+++| +.|.+.++....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~ 35 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPP 35 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccc
Confidence 589999999999999999999 789988887643
No 282
>PRK05865 hypothetical protein; Provisional
Probab=97.57 E-value=0.0002 Score=48.43 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=30.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++|||+++.||+.++.+|..+|++|++++|+.
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~ 34 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR 34 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence 589999999999999999999999999999874
No 283
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.55 E-value=0.00016 Score=42.69 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=28.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
++|||++|.||..++..|.++|+ .|++++|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 58999999999999999999997 688777654
No 284
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.52 E-value=0.00032 Score=40.17 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=30.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++|+|++|.+|+.+++.|.+.+++|.+..|+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 58999999999999999999999999999987
No 285
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.51 E-value=0.0002 Score=42.14 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=27.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CeEEEEec
Q psy6114 11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAK 41 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r 41 (66)
.++|||++|++|..++++|++.| ++|++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC
Confidence 37999999999999999999987 67888776
No 286
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00025 Score=45.91 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=30.1
Q ss_pred EEEEecCCChHHHHHHHHHH--hCCCeEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAA--KDGANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~--~~g~~v~~~~r~~ 43 (66)
.++|||++|.||+.+++.|+ ..|++|++++|+.
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~ 36 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ 36 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 59999999999999999999 5789999999964
No 287
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.49 E-value=0.00025 Score=42.77 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=26.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCe-EEEEec
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGAN-IVIAAK 41 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r 41 (66)
.++|||++|+||..++++|+++|+. |+.+++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~ 33 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDK 33 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecC
Confidence 5899999999999999999999976 444444
No 288
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.41 E-value=0.00027 Score=39.70 Aligned_cols=50 Identities=18% Similarity=0.277 Sum_probs=37.1
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHh
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 62 (66)
+.|.|+ |-+|..++..++..|++|++.+++++..+...+.+......+.+
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~ 51 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVR 51 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhh
Confidence 456665 88999999999999999999999988777655666554444433
No 289
>KOG1430|consensus
Probab=97.38 E-value=0.00064 Score=42.13 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=33.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCC--CeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 44 (66)
++.+++||||+|.+|+.++.+|.+.+ ..|.++|..+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~ 41 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT 41 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence 56789999999999999999999998 78999998875
No 290
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.35 E-value=0.0012 Score=39.03 Aligned_cols=39 Identities=33% Similarity=0.485 Sum_probs=35.1
Q ss_pred CCCCCCEEEEecCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~--~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..++||..+|+|-. ++|+..+++.+.++|+++.+++.++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e 42 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE 42 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH
Confidence 46899999999965 6899999999999999999998876
No 291
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.33 E-value=0.00036 Score=37.66 Aligned_cols=41 Identities=39% Similarity=0.547 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
+.+++.++++|+ +++|..++..|.+.| ..|++++|+.++.+
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~ 57 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAK 57 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH
Confidence 356788999987 899999999999986 78999999876554
No 292
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=97.28 E-value=0.0007 Score=39.87 Aligned_cols=29 Identities=24% Similarity=0.321 Sum_probs=25.4
Q ss_pred EEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 13 FITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
+|||++|.||..+++.|...|+.|+++.+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 58999999999999999999988776543
No 293
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.26 E-value=0.0012 Score=40.36 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=39.6
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHH
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~ 60 (66)
|..++++ +.+.|.|+ |-+|..++..|+..|++|++.+++++..+.....+....+.+
T Consensus 1 ~~~~~~i--~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~ 57 (321)
T PRK07066 1 MAVITDI--KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPAL 57 (321)
T ss_pred CCCCCCC--CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 3444433 45666654 889999999999999999999999876654444444443333
No 294
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.22 E-value=0.001 Score=39.80 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=35.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPK 48 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~ 48 (66)
+..++.+++.|+ ||.|++++..|+..|. +|.+++|+.++.+.
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~ 166 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAA 166 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 456788999876 8899999999999996 79999998766553
No 295
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.20 E-value=0.0012 Score=39.47 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=41.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHhcC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (66)
.+-|.|+ |-+|..++..|+..|++|++.+++++..+...+.+.+..+.+.+++
T Consensus 7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g 59 (286)
T PRK07819 7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRG 59 (286)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcc
Confidence 4666665 7899999999999999999999999887766666665555554443
No 296
>KOG1203|consensus
Probab=97.20 E-value=0.00097 Score=41.97 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=38.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
...+...++|+|++|.+|+-+++.|.++|+.|....|+.++..+
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~ 118 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAED 118 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhh
Confidence 44667889999999999999999999999999999998776553
No 297
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.20 E-value=0.00042 Score=44.13 Aligned_cols=41 Identities=34% Similarity=0.445 Sum_probs=35.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
++.++.++++|+ ||+|++++..|...|++|++++|+.++.+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~ 369 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAE 369 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 467889999996 79999999999999999999988765544
No 298
>PLN02996 fatty acyl-CoA reductase
Probab=97.18 E-value=0.0016 Score=41.61 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCC---CeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDG---ANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g---~~v~~~~r~~~~ 45 (66)
..+|.+++||++|.+|..+++.|++.+ .+|++..|....
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~ 50 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDA 50 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCC
Confidence 578999999999999999999999754 357888886653
No 299
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.12 E-value=0.00045 Score=43.16 Aligned_cols=37 Identities=32% Similarity=0.636 Sum_probs=32.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
+.++|.|+ |++|+.+++.|++++ .+|.+++|+.++..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~ 39 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCA 39 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence 46888887 999999999999998 89999999976654
No 300
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.11 E-value=0.0029 Score=41.57 Aligned_cols=39 Identities=26% Similarity=0.369 Sum_probs=32.8
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC---eEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~---~v~~~~r~~~~ 45 (66)
+.++.+++||++|.+|..+++.|++.+. +|++..|....
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~ 158 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDK 158 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCc
Confidence 4689999999999999999999998653 67888886543
No 301
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.11 E-value=0.0027 Score=37.84 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=31.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++|+|++|-+|..+...|..+|+.|+..+|..-.+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~ 38 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLT 38 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TT
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCC
Confidence 6899999999999999999999999999888754443
No 302
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=97.10 E-value=0.0016 Score=41.80 Aligned_cols=61 Identities=21% Similarity=0.315 Sum_probs=44.9
Q ss_pred CCCCCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHhcC
Q psy6114 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64 (66)
Q Consensus 1 m~~~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (66)
|+...++ +.+-|.|+ |-+|..++..|+..|+.|++.+++++..+...+.++...+.+.++|
T Consensus 1 ~~~~~~i--~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G 61 (507)
T PRK08268 1 MMALPSI--ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKG 61 (507)
T ss_pred CCccCCC--CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444444 45666665 7899999999999999999999999887766666665555555443
No 303
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.09 E-value=0.0013 Score=38.33 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=26.6
Q ss_pred EEEEecCC-ChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 11 TIFITGAS-RGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~-~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+-.+|..+ |++|.+++++|+++|++|+++++..
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~ 50 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKT 50 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcc
Confidence 44566555 5699999999999999999988753
No 304
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.08 E-value=0.0013 Score=39.52 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=31.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
.+.|.| .|-+|..++..|+.+|++|++.+++++..+..
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence 477777 57899999999999999999999997655543
No 305
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.07 E-value=0.0018 Score=38.96 Aligned_cols=47 Identities=28% Similarity=0.492 Sum_probs=38.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCCCchhHH
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTI 53 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 53 (66)
+.+++.+++.|+ ||-+++++..|++.| .+|+++.|+.++.+++.+.+
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~ 170 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLF 170 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence 446788999876 889999999999999 57999999998877444333
No 306
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.07 E-value=0.0053 Score=38.85 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=32.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+++++.++|.|+ |++|.+++..|.++|++|+++++++.
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~ 50 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDD 50 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 356788999986 77999999999999999999987653
No 307
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.06 E-value=0.0049 Score=34.43 Aligned_cols=41 Identities=27% Similarity=0.387 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
...+.++++.|.|. |.||+.+++.+...|++|+..++....
T Consensus 31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP 71 (178)
T ss_dssp BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh
Confidence 34678999999976 889999999999999999999998753
No 308
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.01 E-value=0.00093 Score=39.91 Aligned_cols=44 Identities=23% Similarity=0.399 Sum_probs=36.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCch
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLP 50 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~ 50 (66)
++.++.++|.|+ ||.+++++..|...|+ +|.++.|+.++.+.+.
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La 166 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLV 166 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 356788999865 9999999999999996 6999999977665443
No 309
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.01 E-value=0.0035 Score=35.06 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=34.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.++.++|.|++.-+|..++..|.++|++|.++.|+.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~ 79 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK 79 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence 4688999999998666799999999999999999998753
No 310
>PRK06849 hypothetical protein; Provisional
Probab=97.00 E-value=0.0027 Score=39.17 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..++++|||++..++..+++.|.+.|++|++++.+..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 3588999999999999999999999999999988753
No 311
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.00 E-value=0.0024 Score=35.62 Aligned_cols=39 Identities=23% Similarity=0.288 Sum_probs=30.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..+.||.++|.|- +.+|+.++..|...|++|++++.++-
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi 57 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPI 57 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHH
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChH
Confidence 4578999999976 78999999999999999999988763
No 312
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.97 E-value=0.005 Score=33.53 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=35.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+++||.+.|.|.+.-.|..++..|.++|++|.+++++.
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t 62 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT 62 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 368899999999999999999999999999999998654
No 313
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.95 E-value=0.012 Score=28.59 Aligned_cols=50 Identities=14% Similarity=0.203 Sum_probs=36.8
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHH-HHHHh
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAA-KEVED 62 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~ 62 (66)
++|.| ++.+|..++..|.+.|.+|.++.+++.-...+.+.+.... ..+++
T Consensus 2 vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~ 52 (80)
T PF00070_consen 2 VVVIG-GGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRK 52 (80)
T ss_dssp EEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHH
T ss_pred EEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHH
Confidence 45554 4889999999999999999999999887755555444443 34433
No 314
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.94 E-value=0.0024 Score=38.31 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=35.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCch
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLP 50 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~ 50 (66)
+..++.+++.|+ ||-+++++..|+..|+ +|.++.|+.++.+++.
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 356788999876 8999999999999986 6899999877665443
No 315
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.90 E-value=0.0028 Score=38.08 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.+++++|.|. |++|..++..|...|++|++.+|+.++
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~ 186 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD 186 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3578999999987 779999999999999999999998754
No 316
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.88 E-value=0.0032 Score=36.63 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=25.1
Q ss_pred EEe-cCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 13 FIT-GASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 13 ~vt-g~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+| .+++|||++++++|+++|++|+++++.
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~ 48 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTK 48 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcCh
Confidence 344 457899999999999999999998763
No 317
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=96.87 E-value=0.0027 Score=37.89 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=36.7
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHH
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~ 60 (66)
+.+.+.|+ |-+|..++..|+..|++|++.+++++..+...+.+++..+.+
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~ 54 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARL 54 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 44666665 889999999999999999999999877654444444433333
No 318
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.86 E-value=0.011 Score=34.48 Aligned_cols=36 Identities=39% Similarity=0.490 Sum_probs=32.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC---eEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~---~v~~~~r~ 42 (66)
+++++.+++.|+ |+.|+.++..|...|. +|++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 577889999987 8999999999999996 59999998
No 319
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.86 E-value=0.0049 Score=37.47 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=36.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.||.+.+.|.++-+|+.++..|.++|++|+++++...
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 3678999999999999999999999999999999977654
No 320
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.83 E-value=0.0073 Score=33.34 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEe
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~ 40 (66)
+++++.++|.|+ |.+|...++.|.+.|++|++++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 478999999986 7799999999999999998884
No 321
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.79 E-value=0.0051 Score=35.33 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=31.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.+.+.|+++.+|..++..|++.|++|++.+|++++.+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~ 38 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAE 38 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHH
Confidence 4677888899999999999999999999999876644
No 322
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.78 E-value=0.0065 Score=36.71 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=35.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.|+.++|.|.+.-+|+.++..|..+|++|+++.+..
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 368899999999988899999999999999999998754
No 323
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.76 E-value=0.0061 Score=30.12 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=20.5
Q ss_pred CCEEEEecCCChHHHH--HHHHHHhCCCeEEEEec
Q psy6114 9 GLTIFITGASRGIGKA--IALKAAKDGANIVIAAK 41 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~--~~~~l~~~g~~v~~~~r 41 (66)
.|.++|+|+|+|.|.+ ++..| ..|++.+-+..
T Consensus 39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence 4899999999999998 55555 55666655543
No 324
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.75 E-value=0.0048 Score=36.77 Aligned_cols=43 Identities=26% Similarity=0.335 Sum_probs=33.6
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHH
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTI 53 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 53 (66)
+.+.|.|+ |-+|..++..|+..|++|++.+++++..+...+.+
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~ 46 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERI 46 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence 35666664 88999999999999999999999887665444333
No 325
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=96.74 E-value=0.0033 Score=36.59 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=25.7
Q ss_pred EecCCChHHHHHHHHHHhCCC--eEEEEecCCCC
Q psy6114 14 ITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP 45 (66)
Q Consensus 14 vtg~~~gig~~~~~~l~~~g~--~v~~~~r~~~~ 45 (66)
+||++|.+|..+..+|++.+. +|++..|..+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~ 34 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS 34 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc
Confidence 699999999999999999876 89999997643
No 326
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.74 E-value=0.0078 Score=39.56 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEE
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIV 37 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~ 37 (66)
..+.++|||++|.||+.+++.|..+|++|.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 345799999999999999999999998884
No 327
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.74 E-value=0.006 Score=36.72 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++.||.++|.|.++-.|+.++..|..+|++|.++.+.
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46789999999987779999999999999999999874
No 328
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.0074 Score=36.60 Aligned_cols=38 Identities=34% Similarity=0.454 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEe-cCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA-KTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~-r~~ 43 (66)
++.||.+.+.|.++-+|..++..|..+|+.|.+++ |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 67899999999999999999999999999999995 553
No 329
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.72 E-value=0.0086 Score=33.34 Aligned_cols=39 Identities=26% Similarity=0.430 Sum_probs=31.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.+++.|.+.-+|+.++..|.++++.|.+++...
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T 70 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT 70 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence 368899999999999999999999999999999987665
No 330
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.69 E-value=0.0046 Score=31.72 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=30.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.+++++.++|.|+ |.++..-+..|++.|++|++++..
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence 3578999999987 889999999999999999998877
No 331
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.68 E-value=0.0075 Score=34.68 Aligned_cols=35 Identities=34% Similarity=0.446 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEe
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~ 40 (66)
++.||.++|.|.|.-+|+.++..|..+|++|.+++
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 68999999999999999999999999999999996
No 332
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.68 E-value=0.007 Score=34.35 Aligned_cols=27 Identities=30% Similarity=0.463 Sum_probs=20.8
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 17 ASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 17 ~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+|-.|.++++++..+|+.|+++....
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCc
Confidence 467799999999999999999887763
No 333
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.66 E-value=0.005 Score=36.65 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=33.0
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchh
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPG 51 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 51 (66)
.+.|.|+ |-+|..++..|+..|++|++.+++++..+.+.+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 4666665 889999999999999999999999877665443
No 334
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.65 E-value=0.0042 Score=37.33 Aligned_cols=38 Identities=29% Similarity=0.442 Sum_probs=32.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+++|+|+++++|..++......|++|+.+++++++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 57899999999999999998888899999888776543
No 335
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.64 E-value=0.0065 Score=36.22 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=31.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
+.+.|.|+ |.+|..++..|+..|++|++.+++++..+.
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 42 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEA 42 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 44666665 889999999999999999999998776553
No 336
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=96.64 E-value=0.0044 Score=39.89 Aligned_cols=53 Identities=23% Similarity=0.294 Sum_probs=40.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHhc
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 63 (66)
+.+.|.|+ |-+|..++..|+..|+.|++.+++++.++...+.++...+.+.++
T Consensus 6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~ 58 (503)
T TIGR02279 6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTK 58 (503)
T ss_pred cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhc
Confidence 44666665 789999999999999999999999888776555555555444443
No 337
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.63 E-value=0.0079 Score=34.44 Aligned_cols=37 Identities=27% Similarity=0.322 Sum_probs=32.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++.++.++|.|+ |.+|...+..|.+.|++|+++.+.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4678999999987 889999999999999999988654
No 338
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=96.60 E-value=0.011 Score=39.51 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCC-ChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~-~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.....+.++|||++ +.|+.+++.+|+..|++|+++.-+.+
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s 432 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLS 432 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEccccc
Confidence 34568999999988 67999999999999999998755443
No 339
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.012 Score=35.50 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.7
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEE
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~ 39 (66)
.++.||.+.+.|.|+-+|+.++..|..+|++|.++
T Consensus 154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~ 188 (284)
T PRK14179 154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT 188 (284)
T ss_pred CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence 36789999999999999999999999999999988
No 340
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.57 E-value=0.021 Score=34.80 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=33.7
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC--eEEEEecCCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHP 47 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~--~v~~~~r~~~~~~ 47 (66)
-.++.+.|.|+ |.+|..++..++..+. .+++.|++.+.+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~ 45 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAE 45 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhH
Confidence 34578899997 9999999999998885 6999999887765
No 341
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.51 E-value=0.0076 Score=34.68 Aligned_cols=38 Identities=29% Similarity=0.327 Sum_probs=34.0
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
.+.+.|++|-.|..+.++...+|+.|....|++++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~ 39 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA 39 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc
Confidence 46678999999999999999999999999999888753
No 342
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.012 Score=35.62 Aligned_cols=40 Identities=20% Similarity=0.383 Sum_probs=35.7
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.||.++|.|.+.-+|+.++..|..++++|.++.+...
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~ 194 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK 194 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence 3678999999999999999999999999999999977543
No 343
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=96.50 E-value=0.0099 Score=36.35 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=33.3
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.|.++|||-+|--|.-+++.|+.+||.|+-..|..+.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeecccc
Confidence 5889999999999999999999999999988886443
No 344
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.49 E-value=0.0097 Score=37.74 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=34.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+++++|.|. |.+|+.++..+...|++|+++++++.+
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC 247 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence 468999999987 789999999999999999999988755
No 345
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.48 E-value=0.013 Score=37.09 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.|++++|.|. |.||..++..+...|++|+++++++.+
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R 237 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPIC 237 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 467999999987 689999999999999999999888765
No 346
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.46 E-value=0.015 Score=36.60 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=32.0
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+.++.++|+|.+ +.|.++++.|+++|+.|.+.|....
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457889999974 8999999999999999999987654
No 347
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.46 E-value=0.0061 Score=36.40 Aligned_cols=38 Identities=26% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.+++|+|+++++|...+......|++|+.+++++++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~ 175 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK 175 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 57899999999999999988888899999888776533
No 348
>PLN02494 adenosylhomocysteinase
Probab=96.45 E-value=0.014 Score=37.57 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.|+.++|.|. |.||+.++..+...|++|+++++++.+
T Consensus 251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 468999999987 689999999999999999999888754
No 349
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.45 E-value=0.016 Score=34.99 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=30.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~~~~ 47 (66)
.+.|.|+ |++|..++..|+..| .+|++++++++..+
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~ 39 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAE 39 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhh
Confidence 4677775 899999999999998 57999999987765
No 350
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.42 E-value=0.004 Score=39.22 Aligned_cols=44 Identities=23% Similarity=0.348 Sum_probs=36.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCc
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL 49 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 49 (66)
.++.++.+++.|+ |++|+.++..|...|. +++++.|+.++...+
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~L 221 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKI 221 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3577899999987 9999999999999994 699999987665533
No 351
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.39 E-value=0.0098 Score=35.29 Aligned_cols=49 Identities=22% Similarity=0.264 Sum_probs=34.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHH
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~ 60 (66)
.+.|.|+ |-+|..++..|+..|++|++.+++++..+...+.++...+.+
T Consensus 5 kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~ 53 (282)
T PRK05808 5 KIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRL 53 (282)
T ss_pred EEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4556655 889999999999999999999998876643333333333333
No 352
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.36 E-value=0.012 Score=37.83 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=34.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
..+.||+++|.|.+ .||+.++..+...|++|+++++++..
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~ 289 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC 289 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 45789999999875 69999999999999999999887544
No 353
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.016 Score=35.10 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEec
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
.++.||.++|.|.+.-+|+.++..|..+|+.|.++..
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence 3678999999999999999999999999999998854
No 354
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=96.35 E-value=0.0072 Score=36.78 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=32.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+++|.|+++++|...+......|++|+.+++++++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k 195 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 195 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 57899999999999999988888899998887766533
No 355
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.34 E-value=0.009 Score=35.35 Aligned_cols=37 Identities=30% Similarity=0.483 Sum_probs=32.8
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+..++|+|+++++|..+++.+...|.+|+.+.++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~ 198 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE 198 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 4678999999999999999999999999988887654
No 356
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.32 E-value=0.0092 Score=35.42 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=32.0
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++..++|.|+++++|..++......|++|+.++++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~ 179 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999998888889999988876643
No 357
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=96.31 E-value=0.027 Score=39.62 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=31.8
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCC----CeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDG----ANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g----~~v~~~~r~~~~ 45 (66)
.+.+++||++|.+|..++..|++++ ++|+...|+...
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~ 1011 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSE 1011 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCCh
Confidence 5789999999999999999999877 778888886543
No 358
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.30 E-value=0.016 Score=34.99 Aligned_cols=38 Identities=26% Similarity=0.429 Sum_probs=34.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.+.-+|+.++..|..+|++|.++....
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t 192 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT 192 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence 57899999999999999999999999999999886543
No 359
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=96.29 E-value=0.012 Score=34.32 Aligned_cols=36 Identities=31% Similarity=0.495 Sum_probs=32.4
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+++.++|+|+++++|..++..+...|++|++++++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~ 174 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSE 174 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 578899999999999999999999999998888764
No 360
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.016 Score=35.02 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=34.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
.++.||.++|.|.+.-+|+.++..|.++++.|.++...
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~ 190 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF 190 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence 36789999999999999999999999999999887543
No 361
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.28 E-value=0.01 Score=34.70 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=32.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.++|+|+++++|..++..+...|.+|++++++.+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 180 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAE 180 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999999999999999998887653
No 362
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.28 E-value=0.0074 Score=37.26 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=34.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
-+++++.|+|.+ |+|...++.....|++|+..++++++.
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~ 203 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL 203 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH
Confidence 358999999997 999998888888999999999998865
No 363
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.28 E-value=0.0047 Score=36.94 Aligned_cols=39 Identities=23% Similarity=0.363 Sum_probs=32.3
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPK 48 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~ 48 (66)
++.+++.|+ ||-+++++..|...|+ +|.++.|+.++.+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~ 161 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKA 161 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 467888875 9999999999999996 59999999876553
No 364
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.27 E-value=0.02 Score=32.89 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=32.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+++++.++|.|+ |.+|..-+..|+..|++|++++.+.
T Consensus 5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3578999999986 7789999999999999999987654
No 365
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.019 Score=34.82 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=35.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.+.-+|+.++..|..++++|.+++...
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T 198 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT 198 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC
Confidence 367899999999999999999999999999999987544
No 366
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.019 Score=34.70 Aligned_cols=38 Identities=21% Similarity=0.292 Sum_probs=34.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.+.-+|+.++..|..++++|.++....
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T 192 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT 192 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC
Confidence 67899999999999999999999999999999987644
No 367
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.26 E-value=0.021 Score=34.59 Aligned_cols=40 Identities=23% Similarity=0.383 Sum_probs=35.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.||.++|.|.|.-+|+.++..|..+++.|.++.....
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~ 190 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ 190 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC
Confidence 3678999999999999999999999999999998865543
No 368
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.26 E-value=0.024 Score=34.25 Aligned_cols=40 Identities=20% Similarity=0.330 Sum_probs=34.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.++.++|.|. |++|+.++..|...|++|++++|+++.
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 3567899999987 679999999999999999999998653
No 369
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.24 E-value=0.033 Score=27.54 Aligned_cols=36 Identities=33% Similarity=0.570 Sum_probs=31.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhC-CCeEEEEec
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAK 41 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r 41 (66)
.++.++.+++.|. +..|+.++..+.+. +.+|.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3467899999988 99999999999998 577888887
No 370
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.23 E-value=0.014 Score=37.13 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=33.1
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+.+.++.+++.| .|+.|.+++..|.+.|+.|.+.|++..
T Consensus 10 ~~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~ 49 (473)
T PRK00141 10 LPQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNET 49 (473)
T ss_pred cccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChH
Confidence 3456678888887 588999999999999999999997643
No 371
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.22 E-value=0.01 Score=35.57 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=30.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~ 44 (66)
.+++|.|+++++|...+......|+ +|+.++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 7999999999999999888888898 7888877654
No 372
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.22 E-value=0.023 Score=34.28 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..++++|.+++...
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T 192 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT 192 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC
Confidence 67899999999999999999999999999999987543
No 373
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=96.22 E-value=0.011 Score=39.50 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=39.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHhc
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 63 (66)
+.+.|.|+ |-+|..++..++..|++|++.+++++.++...+.++.......++
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~ 366 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAKLLNKQVER 366 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHc
Confidence 45667665 789999999999999999999999887765555555544444433
No 374
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.21 E-value=0.016 Score=35.07 Aligned_cols=39 Identities=18% Similarity=0.303 Sum_probs=35.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.|.-+|+.++..|..+++.|.+++...
T Consensus 155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T 193 (284)
T PRK14177 155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT 193 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 367899999999999999999999999999999987544
No 375
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.20 E-value=0.014 Score=34.66 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=30.0
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++|+||++- |+.++..|.+.|++|+.+.++...
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence 5899999887 999999999999999998887654
No 376
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.19 E-value=0.012 Score=34.69 Aligned_cols=37 Identities=30% Similarity=0.485 Sum_probs=32.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.++|+|+++++|..++..+...|++|++++++.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~ 202 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSED 202 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5788999999999999999999999999998887653
No 377
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.18 E-value=0.024 Score=34.33 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=34.8
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.|.-+|+.++..|.+++++|.++....
T Consensus 153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T 191 (284)
T PRK14170 153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT 191 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 367899999999999999999999999999999886543
No 378
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.17 E-value=0.025 Score=34.45 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..++++|.++....
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T 192 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT 192 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC
Confidence 67899999999999999999999999999998886543
No 379
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.14 E-value=0.014 Score=37.02 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=30.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+.|+.|.+|.+++..|...|++|++.+|+++.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 47788888999999999999999999999998654
No 380
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.14 E-value=0.024 Score=34.30 Aligned_cols=37 Identities=19% Similarity=0.360 Sum_probs=33.9
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT 42 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~ 42 (66)
++.||.++|.|.|.-+|+.++..|..+++.|.+++..
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~ 191 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK 191 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999988643
No 381
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.13 E-value=0.0088 Score=37.12 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=32.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.++.++|.|+ |.+|...+..+...|++|+++++++++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~ 202 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDR 202 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 45677888876 789999999999999999999987654
No 382
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.12 E-value=0.025 Score=35.76 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=34.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+++++|.|. |.+|+.++..+...|++|+++++++.+
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r 230 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIR 230 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhh
Confidence 468999999986 779999999999999999999888754
No 383
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.12 E-value=0.026 Score=34.61 Aligned_cols=39 Identities=33% Similarity=0.350 Sum_probs=34.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..+.+|++.+.|. |.||+.+++.+...|++|+..+|+..
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 3578999999987 88999999999999999999988754
No 384
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.11 E-value=0.012 Score=37.03 Aligned_cols=41 Identities=29% Similarity=0.468 Sum_probs=35.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
++.++.++|.|+ |.+|..++..|...| .+|++++|+.++..
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~ 218 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAE 218 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 467899999986 999999999999999 78999999876543
No 385
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.03 Score=33.87 Aligned_cols=38 Identities=24% Similarity=0.382 Sum_probs=34.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..+++.|.++....
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T 190 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT 190 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC
Confidence 67899999999999999999999999999999886443
No 386
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=96.08 E-value=0.015 Score=39.00 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=39.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHh
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 62 (66)
+.+.|.|+ |-+|..++..++..|++|++.+++++.+++..+.+........+
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~ 365 (714)
T TIGR02437 314 KQAAVLGA-GIMGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVE 365 (714)
T ss_pred ceEEEECC-chHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 45666654 78999999999999999999999988776555555554444443
No 387
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.07 E-value=0.02 Score=35.21 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=31.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
.+..+.++|.|+ ||+|..++..|++.|. ++.++|++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 356788999886 8899999999999996 799999975
No 388
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.07 E-value=0.029 Score=33.91 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=34.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..+++.|.++....
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T 191 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT 191 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 67899999999999999999999999999999887644
No 389
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.07 E-value=0.023 Score=32.56 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=30.5
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT 42 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~ 42 (66)
+..+.++|.|+ ||+|..++..|++.|. +++++|.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45677888876 8899999999999997 69999998
No 390
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.03 E-value=0.028 Score=33.89 Aligned_cols=38 Identities=29% Similarity=0.476 Sum_probs=31.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE 44 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~ 44 (66)
+.+++.++|.|+ ||-+++++..++..|. +|.++.|+.+
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 457889999986 6679999999998885 7999999864
No 391
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.01 E-value=0.013 Score=35.68 Aligned_cols=35 Identities=31% Similarity=0.501 Sum_probs=29.0
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.+++|+|+++|+|...++-....|+.++++..+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Confidence 89999999999999999998888986655554443
No 392
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.00 E-value=0.027 Score=34.13 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=34.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..+++.|.++....
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T 193 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT 193 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 67899999999999999999999999999999886443
No 393
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=96.00 E-value=0.089 Score=33.75 Aligned_cols=49 Identities=18% Similarity=0.172 Sum_probs=38.5
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHH
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAK 58 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~ 58 (66)
++.++|.|+ +-||.+++..|.+.|.+|.++.+.+.-+....+.+.+...
T Consensus 173 P~~lvIiGg-G~IGlE~a~~~~~LG~~VTiie~~~~iLp~~D~ei~~~~~ 221 (454)
T COG1249 173 PKSLVIVGG-GYIGLEFASVFAALGSKVTVVERGDRILPGEDPEISKELT 221 (454)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCCCCCcCCHHHHHHHH
Confidence 466677765 8999999999999999999999998887765554444443
No 394
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=95.99 E-value=0.035 Score=33.50 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=28.1
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+.+.|.| .|.+|..++..|++.|++|.++.|+.
T Consensus 6 m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 6 PRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred cEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 4566765 59999999999999999999999975
No 395
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.97 E-value=0.033 Score=33.88 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=35.1
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.+.-+|+.++..|..++++|.+++...
T Consensus 156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T 194 (294)
T PRK14187 156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT 194 (294)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC
Confidence 367899999999999999999999999999999887644
No 396
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.96 E-value=0.015 Score=36.61 Aligned_cols=41 Identities=32% Similarity=0.523 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~ 47 (66)
++.++.++|.|+ |.+|..++..|...|+ +|++++|++++..
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~ 220 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAE 220 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 467889999976 9999999999999996 7999999876543
No 397
>PLN02928 oxidoreductase family protein
Probab=95.95 E-value=0.035 Score=34.25 Aligned_cols=37 Identities=27% Similarity=0.400 Sum_probs=33.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+|++.|.|. |.||+.+++.+...|++|+..+|+.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 578999999977 8899999999999999999998863
No 398
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=95.93 E-value=0.035 Score=33.82 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=34.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.|.-+|+.++..|..++++|.++....
T Consensus 163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T 201 (299)
T PLN02516 163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT 201 (299)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC
Confidence 367899999999999999999999999999999986543
No 399
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.89 E-value=0.024 Score=35.56 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=30.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
+.+++||++|.+|+.+..+|+.+- ++|++..|..+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~ 37 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD 37 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH
Confidence 468999999999999999988754 589999887653
No 400
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=95.89 E-value=0.026 Score=33.07 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=32.5
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+++.++|+|+++++|..+...+...|++|+++.++++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDE 175 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999999999999999988877653
No 401
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.88 E-value=0.019 Score=34.25 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=31.7
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
+.+.|.|+ |-+|..++..|+..|++|++++++++..+.
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~ 41 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKN 41 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 45667765 789999999999999999999999876653
No 402
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.87 E-value=0.019 Score=33.64 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=32.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+++.++|+|+++++|..++..+...|++|+.++++.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~ 180 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE 180 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 4678999999999999999999999999988877653
No 403
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.86 E-value=0.045 Score=32.31 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=30.8
Q ss_pred EEecCCChHHHHHHHHHHhCC----CeEEEEecCCCCCCC
Q psy6114 13 FITGASRGIGKAIALKAAKDG----ANIVIAAKTAEPHPK 48 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g----~~v~~~~r~~~~~~~ 48 (66)
.|.|++|.+|..++..|+..+ .+|++.|.++++++.
T Consensus 2 ~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~ 41 (263)
T cd00650 2 AVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG 41 (263)
T ss_pred EEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH
Confidence 577887889999999999988 689999998877663
No 404
>KOG1221|consensus
Probab=95.84 E-value=0.061 Score=34.66 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCC---CeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDG---ANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g---~~v~~~~r~~~ 44 (66)
..+|.+++||++|.+|..+++.|++-. -++.+.-|...
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~ 50 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKK 50 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCC
Confidence 578999999999999999999999854 25666666543
No 405
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.84 E-value=0.031 Score=33.82 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..+++.|.++....
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T 191 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRT 191 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 57899999999999999999999999999999886543
No 406
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.81 E-value=0.038 Score=31.57 Aligned_cols=37 Identities=35% Similarity=0.513 Sum_probs=31.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
.+..+.+++.|. +|+|..+++.|+..|. ++.++|.+.
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH 55 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 356778888875 8999999999999995 799998874
No 407
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.78 E-value=0.023 Score=33.01 Aligned_cols=36 Identities=28% Similarity=0.538 Sum_probs=30.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.++|.|+ |-+|..+|+.|.+.|+.|++.+++++...
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~ 37 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVE 37 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHH
Confidence 4566655 78999999999999999999999887644
No 408
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.76 E-value=0.031 Score=32.52 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=27.2
Q ss_pred EEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 13 FITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
...+++|-||..++.+|+..|++|++..|+.++
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 344677999999999999999999998666543
No 409
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=95.75 E-value=0.022 Score=38.32 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=40.4
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHhc
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 63 (66)
+.+-|.|+ |-+|..++..++..|++|++.+++++.+++..+.+.+..+...++
T Consensus 336 ~~v~ViGa-G~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~ 388 (737)
T TIGR02441 336 KTLAVLGA-GLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKR 388 (737)
T ss_pred cEEEEECC-CHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHHHHHHHHc
Confidence 45677765 889999999999999999999999887776555555555444433
No 410
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.74 E-value=0.045 Score=33.56 Aligned_cols=39 Identities=28% Similarity=0.256 Sum_probs=33.7
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.++++.|.|. |.||..++..|...|.+|+..++++..
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 467888888876 779999999999999999999987643
No 411
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.74 E-value=0.047 Score=33.45 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=29.5
Q ss_pred CEEEEecCCChHHHHHHHHHHhCC-------CeEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g-------~~v~~~~r~~~ 44 (66)
-.+.|||++|.+|..++..|...+ .+|++.|++..
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~ 44 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA 44 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence 358999999999999999998854 47999999653
No 412
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.72 E-value=0.031 Score=34.72 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+.|.|+.|.+|..++..|...|+.|.+.+++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 36788899899999999999999999999999864
No 413
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.72 E-value=0.029 Score=34.52 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=25.9
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCC--eEEEEec
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGA--NIVIAAK 41 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~--~v~~~~r 41 (66)
+.++|||+.|.||..+++++..+.. +|+.+|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk 34 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK 34 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec
Confidence 3589999999999999999998653 3666654
No 414
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.72 E-value=0.025 Score=33.91 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=31.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
.+....++|.|+ ||+|..+++.|++.| -++.++|.+.-.
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~ 66 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVC 66 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEec
Confidence 356677888866 899999999999999 679898876433
No 415
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=95.71 E-value=0.039 Score=35.56 Aligned_cols=37 Identities=35% Similarity=0.434 Sum_probs=31.6
Q ss_pred CCCCCCEEEEecC----------------CChHHHHHHHHHHhCCCeEEEEec
Q psy6114 5 GKLSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAK 41 (66)
Q Consensus 5 ~~~~~~~~~vtg~----------------~~gig~~~~~~l~~~g~~v~~~~r 41 (66)
.++.|+.++||+| ||-.|.++++.+..+|++|+++.-
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G 304 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG 304 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC
Confidence 3589999999973 566999999999999999998863
No 416
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.71 E-value=0.092 Score=32.03 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=32.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+.+|++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~ 181 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPG 181 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 578999999977 8899999999999999999888753
No 417
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.70 E-value=0.025 Score=34.81 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=31.1
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
+....++|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 55677888877 8999999999999996 799999874
No 418
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.67 E-value=0.045 Score=34.21 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=35.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.||.++|.|.+.-+|+.++..|..+++.|.++....
T Consensus 227 i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T 265 (364)
T PLN02616 227 VEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 265 (364)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC
Confidence 367899999999999999999999999999999986544
No 419
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=95.63 E-value=0.042 Score=33.29 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=36.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.++.|+.++|.|.|.=.|+.++..|...+++|.++...-..
T Consensus 152 i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~ 192 (283)
T COG0190 152 IDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKD 192 (283)
T ss_pred CCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCC
Confidence 36789999999999999999999999999999998765533
No 420
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.58 E-value=0.028 Score=34.03 Aligned_cols=41 Identities=34% Similarity=0.482 Sum_probs=33.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHP 47 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~ 47 (66)
++.++.+++.|+ |.+|..++..|...| .+|++++|++++..
T Consensus 175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 357889999976 999999999999866 57999999876543
No 421
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.57 E-value=0.051 Score=33.76 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=34.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++.||.++|.|.+.-+|+.++..|..+++.|.++....
T Consensus 211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T 248 (345)
T PLN02897 211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT 248 (345)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC
Confidence 67899999999999999999999999999999887544
No 422
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.57 E-value=0.067 Score=32.55 Aligned_cols=38 Identities=32% Similarity=0.382 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+.||++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence 3578999999976 8899999999999999999998854
No 423
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=95.55 E-value=0.04 Score=32.66 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=32.3
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++.++|.|+++++|..++......|++|+.+++++++
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA 183 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 5789999999999999999988999999888876544
No 424
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.54 E-value=0.052 Score=34.31 Aligned_cols=39 Identities=23% Similarity=0.311 Sum_probs=31.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
..+.++.+.+.|. ++.|.+.+..|.+.|+.|.+.|....
T Consensus 5 ~~~~~~~i~viG~-G~~G~~~a~~l~~~G~~v~~~D~~~~ 43 (460)
T PRK01390 5 TGFAGKTVAVFGL-GGSGLATARALVAGGAEVIAWDDNPA 43 (460)
T ss_pred cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEECCChh
Confidence 3466788888885 67888889999999999999996543
No 425
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=95.53 E-value=0.024 Score=31.66 Aligned_cols=28 Identities=32% Similarity=0.685 Sum_probs=25.9
Q ss_pred EEEecCCChHHHHHHHHHHhCCCeEEEE
Q psy6114 12 IFITGASRGIGKAIALKAAKDGANIVIA 39 (66)
Q Consensus 12 ~~vtg~~~gig~~~~~~l~~~g~~v~~~ 39 (66)
++++|..+-+|++++.+|+++|.+|++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~ 28 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML 28 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe
Confidence 4678999999999999999999999888
No 426
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.50 E-value=0.083 Score=32.21 Aligned_cols=39 Identities=21% Similarity=0.188 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.++++.+.|. |.||+.+++.|...|++|+..++..+.
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~ 171 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKS 171 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 467899988875 889999999999999999999886543
No 427
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.50 E-value=0.048 Score=32.04 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~ 46 (66)
+....+++.|+ ||+|..++..|++.| -+++++|.+.-+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~ 61 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSL 61 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 45677888866 899999999999998 4688888875443
No 428
>KOG2865|consensus
Probab=95.49 E-value=0.039 Score=34.02 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=34.6
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+.+|-++-|.|+++.+|+-++..|++.|.+|++-+|.++.
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~ 97 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY 97 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc
Confidence 3456778888999999999999999999999999996543
No 429
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=95.48 E-value=0.031 Score=33.86 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=31.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+..++|.|+ +++|...+..+...|++|+++++++++
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~ 202 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEK 202 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 5789999998 999999998888889999888876544
No 430
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.47 E-value=0.071 Score=32.33 Aligned_cols=38 Identities=18% Similarity=0.464 Sum_probs=33.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHh--CCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAK--DGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~--~g~~v~~~~r~~ 43 (66)
++.||.++|.|.+.-+|+.++..|.. +++.|.++....
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T 194 (284)
T PRK14193 155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT 194 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC
Confidence 57899999999999999999999998 789998886543
No 431
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=95.45 E-value=0.038 Score=33.79 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=37.3
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHh
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 62 (66)
+.+-|.|+ |-+|..++..++..|+.|++.|++++..+.....+....+.+.+
T Consensus 4 ~kv~ViGa-G~MG~gIA~~~A~~G~~V~l~D~~~~~~~~~~~~i~~~l~k~~~ 55 (307)
T COG1250 4 KKVAVIGA-GVMGAGIAAVFALAGYDVVLKDISPEALERALAYIEKNLEKLVE 55 (307)
T ss_pred cEEEEEcc-cchhHHHHHHHhhcCCceEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 45666654 78999999999997799999999976665544444444444433
No 432
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.45 E-value=0.025 Score=34.24 Aligned_cols=39 Identities=31% Similarity=0.424 Sum_probs=31.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~ 46 (66)
..+++++|.|+ +++|...+..+...|+ +|+++++++++.
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~ 207 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL 207 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH
Confidence 35789999985 8999999988888898 588888775543
No 433
>KOG1198|consensus
Probab=95.44 E-value=0.041 Score=34.07 Aligned_cols=39 Identities=31% Similarity=0.428 Sum_probs=30.4
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
-+++.+++.|+++|+|...++-....++..+++.++.+.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~ 194 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK 194 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch
Confidence 468899999999999999998888888455555555444
No 434
>PRK08328 hypothetical protein; Provisional
Probab=95.44 E-value=0.039 Score=32.18 Aligned_cols=38 Identities=21% Similarity=0.414 Sum_probs=30.1
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~ 45 (66)
+....++|.|+ ||+|..++..|+..|. +++++|.+.-+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve 63 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE 63 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence 45677888876 8999999999999994 68888876433
No 435
>PLN00203 glutamyl-tRNA reductase
Probab=95.43 E-value=0.017 Score=37.44 Aligned_cols=43 Identities=19% Similarity=0.391 Sum_probs=36.2
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCc
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL 49 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 49 (66)
++.++.+++.|+ |.+|..++..|...|. +|+++.|+.++.+.+
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~L 306 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAAL 306 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Confidence 367899999987 9999999999999996 699999987765533
No 436
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.36 E-value=0.083 Score=32.08 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=33.8
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhC----CCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKD----GANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~----g~~v~~~~r~~ 43 (66)
++.||.++|.|.+.-+|+.++..|..+ ++.|.++....
T Consensus 150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T 191 (287)
T PRK14181 150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS 191 (287)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC
Confidence 678999999999999999999999998 78999886543
No 437
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.36 E-value=0.044 Score=32.89 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=31.2
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
+.+.+.|+ |-+|..++..|+..|++|++++++++..+.+
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~ 43 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERA 43 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 34666655 7899999999999999999999987665543
No 438
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=95.32 E-value=0.05 Score=32.87 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=30.6
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.+++|.|+ +++|...+......|++|+.+++++++
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~ 201 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAA 201 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHH
Confidence 5789999997 899988887777789999888887655
No 439
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.31 E-value=0.067 Score=31.51 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=30.2
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
+..+.++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 45678889887 9999999999999994 688887764
No 440
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=95.30 E-value=0.037 Score=31.62 Aligned_cols=37 Identities=27% Similarity=0.458 Sum_probs=31.5
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++..++++|+++ +|..++..+...|.+|++++++++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~ 169 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDE 169 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHH
Confidence 3578899999888 999999988889999999887753
No 441
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=95.28 E-value=0.05 Score=32.34 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=32.0
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++..++|.|+++.+|..++......|++|+.+.++++
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~ 175 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDE 175 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHH
Confidence 5788999999999999998888889999988877653
No 442
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=95.27 E-value=0.051 Score=31.74 Aligned_cols=37 Identities=35% Similarity=0.516 Sum_probs=32.4
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+..+++.|+++++|..++..+...|+.|+.++++.+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 175 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEE 175 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHH
Confidence 5788999999999999999999999999988877653
No 443
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.27 E-value=0.1 Score=31.75 Aligned_cols=38 Identities=32% Similarity=0.338 Sum_probs=33.2
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+.+|++.+.|. |.||+.+++.+...|++|+.++|+.
T Consensus 118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~ 155 (303)
T PRK06436 118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY 155 (303)
T ss_pred CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3578999999976 8899999999888999999999864
No 444
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=95.25 E-value=0.07 Score=33.01 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=27.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++|.|+ |-+|.+++.+|++.|.+|+++++..
T Consensus 3 ~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 3 HIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4667765 7799999999999999999999975
No 445
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=95.24 E-value=0.05 Score=36.46 Aligned_cols=49 Identities=18% Similarity=0.133 Sum_probs=35.7
Q ss_pred CEEEEecCCChHHHHHHHHHH-hCCCeEEEEecCCCCCCCchhHHHHHHHH
Q psy6114 10 LTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTIYSAAKE 59 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~ 59 (66)
+.+.|.|+ |-+|..++..++ ..|++|++.+.+++.+++....+....+.
T Consensus 305 ~~v~ViGa-G~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~ 354 (699)
T TIGR02440 305 KKVGILGG-GLMGGGIASVTATKAGIPVRIKDINPQGINNALKYAWKLLDK 354 (699)
T ss_pred cEEEEECC-cHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 45677765 889999999998 48999999999987665444444433333
No 446
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.24 E-value=0.15 Score=32.42 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=30.9
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
+.++.+.|.|. +..|.++++.|.+.|+.|.+.|++..
T Consensus 12 ~~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~ 48 (458)
T PRK01710 12 IKNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSE 48 (458)
T ss_pred hcCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 45678888875 66888999999999999999998754
No 447
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.24 E-value=0.051 Score=31.90 Aligned_cols=38 Identities=32% Similarity=0.471 Sum_probs=33.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+..+++.|+++++|..++..+...|++|+.+++++++
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 169 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPAR 169 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 47899999999999999999999999999888776543
No 448
>KOG2018|consensus
Probab=95.23 E-value=0.036 Score=34.46 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=34.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCe-EEEEecCCCCCCCc
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKL 49 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~~~ 49 (66)
.+++..++|.|+ ||.|.+.+..|++.|++ +.++|.++-.+.++
T Consensus 71 kl~~syVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSL 114 (430)
T KOG2018|consen 71 KLTNSYVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFDQVSLSSL 114 (430)
T ss_pred HhcCcEEEEEec-CchhHHHHHHHHHhcCceEEEechhhccHhhh
Confidence 467788888876 88999999999999975 77888876665544
No 449
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=95.23 E-value=0.046 Score=29.57 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=30.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CeEEEEecCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPH 46 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~~~~~ 46 (66)
.+.|.|++|.+|..++..|...+ .++++.|++++..
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~ 39 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKA 39 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccc
Confidence 47788999999999999999877 5699999987643
No 450
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=95.23 E-value=0.043 Score=32.56 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=31.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.+..++|.|+++++|..++..+...|++|+.++++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 568899999999999999999999999998887754
No 451
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=95.21 E-value=0.26 Score=31.23 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=32.7
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCch
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLP 50 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 50 (66)
++.++|.|+ +.+|.+++..|...|.+|.++.+.+.-+..+.
T Consensus 166 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~il~~~d 206 (450)
T TIGR01421 166 PKRVVIVGA-GYIAVELAGVLHGLGSETHLVIRHERVLRSFD 206 (450)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCCCCcccC
Confidence 467777765 68999999999999999999998765554443
No 452
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=95.21 E-value=0.048 Score=36.56 Aligned_cols=51 Identities=16% Similarity=0.099 Sum_probs=37.4
Q ss_pred CEEEEecCCChHHHHHHHHHH-hCCCeEEEEecCCCCCCCchhHHHHHHHHHH
Q psy6114 10 LTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTIYSAAKEVE 61 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~ 61 (66)
+.+.|.|+ |-+|..++..++ ..|++|++.+.+++..+.....+....+...
T Consensus 310 ~~v~ViGa-G~mG~giA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~ 361 (708)
T PRK11154 310 NKVGVLGG-GLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKV 361 (708)
T ss_pred cEEEEECC-chhhHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 55677765 889999999999 7899999999988766544444444444443
No 453
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.21 E-value=0.012 Score=32.30 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=27.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
.+-+.|. +-+|..++..|.+.|++|++.+|++++.
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~ 37 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA 37 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh
Confidence 3555555 7899999999999999999999986554
No 454
>PRK07846 mycothione reductase; Reviewed
Probab=95.21 E-value=0.26 Score=31.28 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=35.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHH
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA 56 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~ 56 (66)
++.++|.|+ +.+|..++..|.+.|.+|.++.+.+.-+......+...
T Consensus 166 ~~~vvIIGg-G~iG~E~A~~l~~~G~~Vtli~~~~~ll~~~d~~~~~~ 212 (451)
T PRK07846 166 PESLVIVGG-GFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDISER 212 (451)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHH
Confidence 567888875 68999999999999999999999876554443344333
No 455
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.19 E-value=0.087 Score=28.23 Aligned_cols=30 Identities=23% Similarity=0.526 Sum_probs=26.0
Q ss_pred EEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 13 FITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 13 ~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
+|.| .|.+|..++.+|.+.|++|.+++|..
T Consensus 2 ~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 2 LIIG-AGAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp EEES-TSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred EEEC-cCHHHHHHHHHHHHCCCceEEEEccc
Confidence 4554 48899999999999999999999876
No 456
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.14 E-value=0.054 Score=31.79 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=32.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+..++|.|+++++|..++......|++|+.+..+++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~ 178 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPE 178 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999999999999999988876653
No 457
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.13 E-value=0.045 Score=34.25 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=30.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 47 (66)
.+++.|+ |.+|..++..|.++|+.|++.+++++..+
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~ 37 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLR 37 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 4777876 99999999999999999999999776543
No 458
>PTZ00325 malate dehydrogenase; Provisional
Probab=95.09 E-value=0.11 Score=31.84 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=31.6
Q ss_pred CCCCCCCEEEEecCCChHHHHHHHHHHhCC--CeEEEEecC
Q psy6114 4 TGKLSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKT 42 (66)
Q Consensus 4 ~~~~~~~~~~vtg~~~gig~~~~~~l~~~g--~~v~~~~r~ 42 (66)
+.-.+.+.+.|+|++|.+|..++..++..+ .+++++|++
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~ 43 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV 43 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence 333556789999999999999999998555 579999993
No 459
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=95.08 E-value=0.074 Score=31.43 Aligned_cols=37 Identities=30% Similarity=0.420 Sum_probs=32.1
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.+..++|+|+++++|..++..+...|++|+.++++.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~ 178 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPA 178 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999999999999999988877643
No 460
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.06 E-value=0.1 Score=31.77 Aligned_cols=38 Identities=18% Similarity=0.272 Sum_probs=32.9
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+.||++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus 143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~ 180 (314)
T PRK06932 143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG 180 (314)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence 3578999999976 8899999999999999998887653
No 461
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.05 E-value=0.22 Score=28.89 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=28.8
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT 42 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~ 42 (66)
+....++|.|+ +|+|..+++.|+..|. +++++|.+
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45677888875 8999999999999995 67787765
No 462
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=95.04 E-value=0.062 Score=31.79 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=31.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++..++|.|+++.+|..++......|+.|+++..+.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~ 175 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDA 175 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHH
Confidence 5788999999999999999998899999888866543
No 463
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.04 E-value=0.087 Score=31.98 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=34.1
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHh----CCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAK----DGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~----~g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|.. ++++|.++....
T Consensus 154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t 195 (286)
T PRK14184 154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT 195 (286)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc
Confidence 67899999999999999999999998 789999887554
No 464
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.04 E-value=0.036 Score=32.85 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=28.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+.|.|+ |.+|..++..|++.|++|.+++|+.+.
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~ 35 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAH 35 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHH
Confidence 3667765 899999999999999999999996544
No 465
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.03 E-value=0.089 Score=31.83 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=35.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.|+.++|.|.+.-.|+.++..|..+|++|.++.++.
T Consensus 148 i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t 186 (279)
T PRK14178 148 ISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT 186 (279)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh
Confidence 367899999999999999999999999999999988654
No 466
>PRK07236 hypothetical protein; Provisional
Probab=95.01 E-value=0.13 Score=31.70 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++...++|.|+ |-.|..++..|++.|.+|.++.+.+.
T Consensus 4 ~~~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSPT 40 (386)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 44567888876 56789999999999999999998764
No 467
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=95.00 E-value=0.072 Score=30.80 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=29.6
Q ss_pred CCEEEEecCCChHHHHH-----HHHHHhCCCeEEEEecCCC
Q psy6114 9 GLTIFITGASRGIGKAI-----ALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~-----~~~l~~~g~~v~~~~r~~~ 44 (66)
+|.+.+++..||.|..+ +..|++.|.+|.++|.++.
T Consensus 1 ~~ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~~ 41 (261)
T TIGR01968 1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIG 41 (261)
T ss_pred CeEEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 46788999999988864 6677788999999998874
No 468
>PRK04148 hypothetical protein; Provisional
Probab=95.00 E-value=0.061 Score=29.21 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=29.8
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+++.++..|.+ .|..++..|.+.|++|+.+|.++..
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a 51 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA 51 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH
Confidence 45678888876 6677889999999999999998764
No 469
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.97 E-value=0.11 Score=31.16 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=35.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCchhHHHHH
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSA 56 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~ 56 (66)
++...++|.|. ||.|.+.++.|++-|. ++.+.|-+.-....++.++..+
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~ 77 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHAL 77 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhh
Confidence 45667888876 8999999999999985 5888887765555444444333
No 470
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.95 E-value=0.11 Score=31.72 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=34.0
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhC----CCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKD----GANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~----g~~v~~~~r~~ 43 (66)
.++.||.++|.|.|.-+|+.++..|..+ ++.|.++....
T Consensus 157 i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T 199 (297)
T PRK14168 157 VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS 199 (297)
T ss_pred CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC
Confidence 3678999999999999999999999988 78998886543
No 471
>KOG2304|consensus
Probab=94.94 E-value=0.042 Score=32.80 Aligned_cols=52 Identities=27% Similarity=0.355 Sum_probs=38.5
Q ss_pred CEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCchhHHHHHHHHHHh
Q psy6114 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62 (66)
Q Consensus 10 ~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 62 (66)
+.+-|.|+ |-+|..+++--+..|+.|++.+++.+.+.+....|.+-...+.+
T Consensus 12 ~~V~ivGa-G~MGSGIAQv~a~sg~~V~l~d~~~~aL~~A~~~I~~sl~rvak 63 (298)
T KOG2304|consen 12 KNVAIVGA-GQMGSGIAQVAATSGLNVWLVDANEDALSRATKAISSSLKRVAK 63 (298)
T ss_pred cceEEEcc-cccchhHHHHHHhcCCceEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 55666654 77899999999999999999999988877655555554444433
No 472
>PRK08223 hypothetical protein; Validated
Probab=94.94 E-value=0.071 Score=32.36 Aligned_cols=38 Identities=26% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCC-CeEEEEecCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP 45 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g-~~v~~~~r~~~~ 45 (66)
+....++|.|+ +|+|..++..|+..| -++.++|.+.-+
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve 63 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFE 63 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence 45677888876 899999999999999 468888876433
No 473
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.93 E-value=0.066 Score=31.40 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=29.6
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
+....++|.|. +|+|..+++.|++.|. +++++|.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 45677888876 8999999999999994 688888763
No 474
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.92 E-value=0.12 Score=31.58 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=33.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhC----CCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKD----GANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~----g~~v~~~~r~~ 43 (66)
++.||.++|.|.|.-+|+.++..|..+ ++.|.++....
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T 195 (297)
T PRK14167 154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT 195 (297)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC
Confidence 578999999999999999999999987 78999875443
No 475
>PRK07574 formate dehydrogenase; Provisional
Probab=94.92 E-value=0.11 Score=32.74 Aligned_cols=38 Identities=24% Similarity=0.276 Sum_probs=33.5
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
..+.++++.|.|. |.||+.+++.|...|.+|+..+|..
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 3578899999976 7799999999999999999999875
No 476
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=94.91 E-value=0.088 Score=31.19 Aligned_cols=38 Identities=24% Similarity=0.380 Sum_probs=31.9
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
.+..++|.|+++.+|..++......|++|+++..++++
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~ 183 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEE 183 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 35789999999999999999888899998887665533
No 477
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=94.90 E-value=0.066 Score=34.46 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=30.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
.+-+. |.|-+|..++..|+..|++|++.+++++..+.
T Consensus 6 kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~ 42 (495)
T PRK07531 6 KAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAERI 42 (495)
T ss_pred EEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 35555 45889999999999999999999998876553
No 478
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.89 E-value=0.14 Score=30.56 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=30.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEE-EEec
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIV-IAAK 41 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~-~~~r 41 (66)
.+++++++.|.|. +.+|..+++.|.+.|++|+ +.|.
T Consensus 34 ~~l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD~ 70 (254)
T cd05313 34 ETLKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSDS 70 (254)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Confidence 4578899999876 8899999999999999988 5553
No 479
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=94.87 E-value=0.13 Score=30.01 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=30.0
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEE-EEec
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIV-IAAK 41 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~-~~~r 41 (66)
++.++.+.|.|. |.+|+.+++.|.+.|++|+ ++|.
T Consensus 28 ~l~~~~v~I~G~-G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 28 GLAGARVAIQGF-GNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Confidence 567889998875 8999999999999999988 6655
No 480
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=94.84 E-value=0.081 Score=31.27 Aligned_cols=37 Identities=27% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
+..++|.|+++++|..++......|++|+++++++++
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQ 183 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 4589999999999999998888899999888887644
No 481
>PLN03139 formate dehydrogenase; Provisional
Probab=94.82 E-value=0.14 Score=32.25 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
.++.++++.+.|. |.||+.+++.|...|.+|+..+++.
T Consensus 195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4688999999985 7899999999999999999988864
No 482
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.79 E-value=0.042 Score=34.41 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=33.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH 46 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 46 (66)
...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~ 267 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA 267 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 34678888887 8999999999999999999999887654
No 483
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=94.79 E-value=0.093 Score=30.99 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=32.8
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 45 (66)
++..++|.|+++.+|..++..+...|++|++...++++
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~ 175 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ 175 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence 57789999999999999999999999999888776543
No 484
>KOG1204|consensus
Probab=94.78 E-value=0.018 Score=34.11 Aligned_cols=27 Identities=33% Similarity=0.468 Sum_probs=22.2
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGA 34 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~ 34 (66)
.++++++||+++|||..++..+...+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~ 31 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDD 31 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcch
Confidence 468899999999999888877776553
No 485
>PRK06444 prephenate dehydrogenase; Provisional
Probab=94.76 E-value=0.092 Score=30.14 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=25.0
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCeEEE
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGANIVI 38 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~~v~~ 38 (66)
.+.+.|++|++|+.++..|.+.|+.|.+
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence 4778899999999999999999998864
No 486
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=94.74 E-value=0.098 Score=30.11 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=28.0
Q ss_pred CEEEEecCCChHHHH-----HHHHHHhCCCeEEEEecCCC
Q psy6114 10 LTIFITGASRGIGKA-----IALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 10 ~~~~vtg~~~gig~~-----~~~~l~~~g~~v~~~~r~~~ 44 (66)
+.+.+.++.||.|.. ++..|++.|.+|.++|.++.
T Consensus 1 ~ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 40 (251)
T TIGR01969 1 RIITIASGKGGTGKTTITANLGVALAKLGKKVLALDADIT 40 (251)
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 357788888888876 46678889999999998874
No 487
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.73 E-value=0.13 Score=31.20 Aligned_cols=33 Identities=33% Similarity=0.450 Sum_probs=28.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCC--eEEEEecCC
Q psy6114 11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKTA 43 (66)
Q Consensus 11 ~~~vtg~~~gig~~~~~~l~~~g~--~v~~~~r~~ 43 (66)
.+.|.|++|.+|..++..++..|. .|++++++.
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 578899999999999999999885 499999954
No 488
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.73 E-value=0.039 Score=27.45 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=25.9
Q ss_pred CCChHHHHHHHHHHhCC---CeEEEE-ecCCCCCC
Q psy6114 17 ASRGIGKAIALKAAKDG---ANIVIA-AKTAEPHP 47 (66)
Q Consensus 17 ~~~gig~~~~~~l~~~g---~~v~~~-~r~~~~~~ 47 (66)
+.|.+|.+++..|.+.| .+|+++ +|++++.+
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~ 40 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAA 40 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHH
Confidence 56899999999999999 889855 88876543
No 489
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.73 E-value=0.15 Score=31.12 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=33.7
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhC----CCeEEEEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKD----GANIVIAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~----g~~v~~~~r~~ 43 (66)
.++.||.++|.|.|.-+|+.++..|..+ ++.|.++....
T Consensus 153 i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T 195 (293)
T PRK14185 153 IETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS 195 (293)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC
Confidence 3578999999999999999999999988 68898886543
No 490
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=94.70 E-value=0.066 Score=32.16 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=30.7
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCe-EEEEecCCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEP 45 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~-v~~~~r~~~~ 45 (66)
.+..++|+|+ +++|...+..+...|++ |+++++++++
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~ 200 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPER 200 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence 4789999975 89999999988889988 8888776543
No 491
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.70 E-value=0.17 Score=31.20 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=34.4
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
.++.||++-|.|. |.||.++++++...|.+|+..+|...
T Consensus 142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~ 180 (324)
T COG1052 142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN 180 (324)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 3678999999975 88999999999999999999998863
No 492
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.70 E-value=0.15 Score=30.76 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=28.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++.+.+.|. |.+|..++..|...|++|.+.+|+..
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 345666654 88999999999999999999999754
No 493
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.69 E-value=0.18 Score=29.34 Aligned_cols=38 Identities=26% Similarity=0.535 Sum_probs=30.3
Q ss_pred CCCCCCEEEEecCCChHHHHHHHHHHhCCCeEE-EEecCC
Q psy6114 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIV-IAAKTA 43 (66)
Q Consensus 5 ~~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~-~~~r~~ 43 (66)
.++.++.+.|.|. |.+|+.+++.|.+.|..|+ ++|.+.
T Consensus 19 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 19 DSLEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3578899999876 8899999999999988654 555543
No 494
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.69 E-value=0.095 Score=32.46 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=30.3
Q ss_pred CCCCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecCC
Q psy6114 7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 43 (66)
Q Consensus 7 ~~~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~~ 43 (66)
+....++|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 56678888877 8999999999999984 688888864
No 495
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=94.69 E-value=0.08 Score=30.81 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=32.0
Q ss_pred CCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCC
Q psy6114 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44 (66)
Q Consensus 8 ~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~ 44 (66)
++..++|.|+.+++|..++......|+.|+.++++++
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~ 172 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEE 172 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 5788999999999999999998889999988876643
No 496
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.68 E-value=0.11 Score=30.13 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=32.3
Q ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCC
Q psy6114 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA 43 (66)
Q Consensus 6 ~~~~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~ 43 (66)
++++|.++|.|+ |..+..-++.|++.|++|+++....
T Consensus 9 ~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 9 DLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF 45 (210)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 578999999986 7789999999999999999887665
No 497
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=94.66 E-value=0.52 Score=29.62 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=32.1
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL 49 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 49 (66)
++.++|.|+ +.+|..++..|.+.|.+|.++.+.+.-+...
T Consensus 157 ~~~vvIIGg-G~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~ 196 (438)
T PRK07251 157 PERLGIIGG-GNIGLEFAGLYNKLGSKVTVLDAASTILPRE 196 (438)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCccCCCC
Confidence 567888876 6799999999999999999998876554433
No 498
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.64 E-value=0.12 Score=27.51 Aligned_cols=33 Identities=27% Similarity=0.548 Sum_probs=26.6
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT 42 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~-~v~~~~r~ 42 (66)
.+.+++.|+ +++|..+++.|+..|. ++.++|.+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence 356777765 8999999999999996 68888875
No 499
>PRK06370 mercuric reductase; Validated
Probab=94.63 E-value=0.52 Score=29.89 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=31.9
Q ss_pred CCEEEEecCCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK 48 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 48 (66)
++.++|.|+ +.+|..++..|.+.|.+|.++.+.+.-+..
T Consensus 171 ~~~vvVIGg-G~~g~E~A~~l~~~G~~Vtli~~~~~~l~~ 209 (463)
T PRK06370 171 PEHLVIIGG-GYIGLEFAQMFRRFGSEVTVIERGPRLLPR 209 (463)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEEcCCCCCcc
Confidence 577888876 579999999999999999999987655443
No 500
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=94.63 E-value=0.098 Score=31.20 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=30.2
Q ss_pred CCEEEEecCCChHHHHHHHHHHhC-CCeEEEEecCCC
Q psy6114 9 GLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAE 44 (66)
Q Consensus 9 ~~~~~vtg~~~gig~~~~~~l~~~-g~~v~~~~r~~~ 44 (66)
+..++|.|+++++|..++...... |++|+.+..+++
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~ 185 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPE 185 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHH
Confidence 789999999999999988776666 999988877654
Done!