RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6114
(66 letters)
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 104 bits (262), Expect = 2e-29
Identities = 52/65 (80%), Positives = 60/65 (92%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
+ NTG+L+G T+FITGASRGIGKAIALKAAKDGANIVIAAKTA+PHPKL GTIY+AA+E+
Sbjct: 37 LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI 96
Query: 61 EDAGG 65
E GG
Sbjct: 97 EAVGG 101
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics;
2.50A {Mycobacterium thermoresistibile}
Length = 285
Score = 95.4 bits (238), Expect = 3e-26
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
+ L G T+FI+G SRGIG AIA + A DGAN+ + AK+AEPHPKLPGTIY+AAKE+E+
Sbjct: 3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE 62
Query: 63 AGG 65
AGG
Sbjct: 63 AGG 65
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 94.2 bits (235), Expect = 7e-26
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ LSG T+FITGASRGIG AIAL+AA+DGAN+ IAAK+A +PKLPGTI+SAA V A
Sbjct: 1 SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60
Query: 64 GG 65
GG
Sbjct: 61 GG 62
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 56.0 bits (136), Expect = 1e-11
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
G L+ + I+G +G +A + A+ GA++V+AA+T E + AK+V D
Sbjct: 6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVER-------LEDVAKQVTDT 58
Query: 64 GG 65
G
Sbjct: 59 GR 60
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium
loti} PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 55.6 bits (135), Expect = 2e-11
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
T +L+G T +TGA++GIGKAIA + A DGA ++++ AE A
Sbjct: 1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAE----------GAKAAAASI 50
Query: 64 GG 65
G
Sbjct: 51 GK 52
>3imf_A Short chain dehydrogenase; structural genomics, infectious D
center for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 55.6 bits (135), Expect = 2e-11
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ + + ITG S G+GK +A + AK+GA +VI +T E + A E+E
Sbjct: 1 SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK-------LEEAKLEIEQF 53
Query: 64 GG 65
G
Sbjct: 54 PG 55
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 55.3 bits (134), Expect = 3e-11
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
++G +TGASRGIG+ IAL+ K GA + I + + T+ A+E + G
Sbjct: 1 APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD-------TLRVVAQEAQSLG 53
Query: 65 G 65
G
Sbjct: 54 G 54
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 54.8 bits (133), Expect = 3e-11
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G I +TGA+RGIG A A A GA++V+ +T ++ + +++ AG
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEA-------SLAEVSDQIKSAGQ 63
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 54.9 bits (133), Expect = 3e-11
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ + ITGAS+GIG IA A DG +V+ A++ + + E+ +
Sbjct: 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQ-------NLEKVHDEIMRS 54
Query: 64 GGY 66
+
Sbjct: 55 NKH 57
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 54.5 bits (132), Expect = 5e-11
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIV---IAAKTAEPHPKLPGTIYSA---A 57
GKL G FITGA+RG G+A A++ A +GA+I+ IA K P P +
Sbjct: 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 58 KEVEDAGG 65
+ VE A
Sbjct: 66 RLVEAANR 73
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 54.5 bits (132), Expect = 5e-11
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA---- 56
G L G FITGA+RG G++ A++ A +GA+I+ A + S
Sbjct: 7 AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66
Query: 57 --AKEVEDAGG 65
A+ VED G
Sbjct: 67 ETARLVEDQGR 77
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 54.1 bits (131), Expect = 7e-11
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AK 58
GK+ G FITGA+RG G++ A+ A++GA+I+ K + T +
Sbjct: 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82
Query: 59 EVEDAGG 65
+VE G
Sbjct: 83 QVEALGR 89
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 53.7 bits (130), Expect = 8e-11
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
G+LSG TI +TGA+ GIG+A A++GA++V + A+ V
Sbjct: 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER----------LLAEAVAALE 51
Query: 65 G 65
Sbjct: 52 A 52
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus
SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 53.6 bits (130), Expect = 8e-11
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
T +L ITG + GIG+AIA + A +GA+I IA P A + +
Sbjct: 2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---------EAEAAIRNL 52
Query: 64 GG 65
G
Sbjct: 53 GR 54
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 54.2 bits (131), Expect = 9e-11
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------AK 58
+L G FITGA+RG G+ A++ A+DGA+I +A P L S +
Sbjct: 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADI-VAIDLCRQQPNLDYAQGSPEELKETVR 100
Query: 59 EVEDAGG 65
VE+ G
Sbjct: 101 LVEEQGR 107
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 53.8 bits (130), Expect = 1e-10
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
M+ G FITG G+GK + + GA VIA++ + + + A+++
Sbjct: 18 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD-------VLKATAEQI 70
Query: 61 EDAGG 65
G
Sbjct: 71 SSQTG 75
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 53.7 bits (130), Expect = 1e-10
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AK 58
G L+G FITGA+RG G+A A++ A DGA+I+ P T K
Sbjct: 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVK 67
Query: 59 EVEDAGG 65
VED G
Sbjct: 68 LVEDIGS 74
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 53.4 bits (129), Expect = 1e-10
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
LSG +TGASRGIG AIA K GA +V+ A+ E + +E+ AG
Sbjct: 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV-------EREIVAAG 77
Query: 65 G 65
G
Sbjct: 78 G 78
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes,
fatty acid synthesis, short-chain
dehydrogenases/reductases, structural genomics; HET:
ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Length = 303
Score = 53.4 bits (129), Expect = 1e-10
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ G L G +TG + GIGKAI + + G+N+VIA++ E
Sbjct: 10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE 53
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 53.4 bits (129), Expect = 1e-10
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------- 56
TG++ G F+TGA+RG G++ A++ A++GA+I+ + T A
Sbjct: 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65
Query: 57 --AKEVEDAGG 65
A V+
Sbjct: 66 ETADLVKGHNR 76
>3s55_A Putative short-chain dehydrogenase/reductase; structural
genomics, seattle structural genomics center for
infectious disease, ssgcid; HET: NAD; 2.10A
{Mycobacterium abscessus}
Length = 281
Score = 53.3 bits (129), Expect = 2e-10
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------AK 58
G T ITG +RG+G++ A+ A+ GA+I E + + +A
Sbjct: 6 ADFEGKTALITGGARGMGRSHAVALAEAGADI-AICDRCENSDVVGYPLATADDLAETVA 64
Query: 59 EVEDAGG 65
VE G
Sbjct: 65 LVEKTGR 71
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 52.9 bits (128), Expect = 2e-10
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
TI +TG +RGIG A A GAN+ + ++A + K ++ G
Sbjct: 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE------VTEKVGKEFGV 64
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 52.9 bits (128), Expect = 2e-10
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
+ L +T ++ GIG AIA + A+DGA++V++++ E + +
Sbjct: 6 VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN-------VDRTVATL 58
Query: 61 EDAGG 65
+ G
Sbjct: 59 QGEGL 63
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 52.6 bits (127), Expect = 2e-10
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
+S I +TGA G+G+A+ + + G + + + +
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR 39
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 52.9 bits (128), Expect = 2e-10
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 10/65 (15%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
M L G +TGASRGIGKAIA A+ GA ++ A + A
Sbjct: 1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSES----------GAQAIS 50
Query: 61 EDAGG 65
+ G
Sbjct: 51 DYLGD 55
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 52.9 bits (128), Expect = 2e-10
Identities = 12/62 (19%), Positives = 24/62 (38%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+L +TGA GIG+A++++ A +GA + + + +
Sbjct: 2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61
Query: 64 GG 65
G
Sbjct: 62 RG 63
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 52.5 bits (127), Expect = 2e-10
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L+ I +TGAS GIG+ A+ A+ GA +++ + E + A + + G
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEE-------KLRQVASHINEETG 61
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 52.5 bits (127), Expect = 3e-10
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA----AKTAEPHPKLPGTIYSAA 57
++ + + TI + GA R IG+A A++ A++GAN+V+ A+ A +A
Sbjct: 1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAA----------TAV 50
Query: 58 KEVEDAGG 65
E+E G
Sbjct: 51 AEIEKLGR 58
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 52.6 bits (127), Expect = 3e-10
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+TGA RGIG+ IA AK ++++ ++T + + E++ G
Sbjct: 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-------VDEIKSFGY 93
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 52.2 bits (126), Expect = 3e-10
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AKE 59
G++ + +TG +RG G++ A+K A++GA+I++ E + T E
Sbjct: 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65
Query: 60 VEDAGG 65
VE G
Sbjct: 66 VEKTGR 71
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 52.1 bits (126), Expect = 3e-10
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI---AAKTAEPHPKLPGTIYSAA 57
+ L I I G + +G A A + N+V+ AK ++ KL
Sbjct: 3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL-------K 55
Query: 58 KEVEDAGG 65
E+ED G
Sbjct: 56 DELEDQGA 63
>3ak4_A NADH-dependent quinuclidinone reductase; SDR,
(R)-3-quinuclidinol, chiral alcohol, oxidoreductase;
HET: NAD; 2.00A {Agrobacterium tumefaciens}
Length = 263
Score = 52.2 bits (126), Expect = 3e-10
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
M LSG +TG S+GIG AIA K GA + IA
Sbjct: 4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM 47
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 51.7 bits (125), Expect = 4e-10
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ +TG+ GIG+A A A++GA +V+A AE + AK++ GG
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE-------AAEAVAKQIVADGG 58
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 51.9 bits (125), Expect = 4e-10
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
L G + +TGAS+GIG+ +A AK GA++V+ A++ E
Sbjct: 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE 63
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 51.8 bits (125), Expect = 5e-10
Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ + +TG RGIG IA A G +I I E+
Sbjct: 24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVA------PVIAELSGL 77
Query: 64 GG 65
G
Sbjct: 78 GA 79
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 51.9 bits (125), Expect = 5e-10
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
+ SG ++ ITG+S GIG++ A+ AK+GA + I + + + +++ AG
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED-------RLEETKQQILKAG 74
Query: 65 G 65
Sbjct: 75 V 75
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural
genomics, protein structure initiati
nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Length = 272
Score = 51.8 bits (125), Expect = 5e-10
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ + +TG SRGIG A+ AA+ G + +
Sbjct: 18 LYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGV 55
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd;
NAD(P)-binding, structural genomics, PSI-biology; HET:
MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 51.8 bits (125), Expect = 5e-10
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+L G + ITG++RGIG+A A ++GA + IA E A + +
Sbjct: 3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIE----------RARQAAAEI 52
Query: 64 GG 65
G
Sbjct: 53 GP 54
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 51.8 bits (125), Expect = 5e-10
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
LS I ITGAS+ +G AL+ + G ++I+ +T ++ E+
Sbjct: 19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH----------ASVTEL 68
Query: 61 EDAGG 65
AG
Sbjct: 69 RQAGA 73
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 51.3 bits (124), Expect = 6e-10
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
+ +L G ITGA GIGK IA+ A GA++V++ A+ E+
Sbjct: 3 NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD-------AANHVVDEI 55
Query: 61 EDAGG 65
+ GG
Sbjct: 56 QQLGG 60
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 51.4 bits (124), Expect = 6e-10
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
MI+ L+G T ITGAS GIG AIA K G+ ++I+ E
Sbjct: 9 MID---LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEE 49
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP
COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 51.5 bits (124), Expect = 6e-10
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
+ L FITG GIG IA + G + VIA+++ + +AA+++
Sbjct: 19 LFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP-------RVLTAARKL 71
Query: 61 EDAGG 65
A G
Sbjct: 72 AGATG 76
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 51.3 bits (124), Expect = 6e-10
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
L G + ITG+S G+GK++A++ A + A +V+ ++ E S +E++
Sbjct: 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKV 55
Query: 64 GG 65
GG
Sbjct: 56 GG 57
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 51.4 bits (124), Expect = 7e-10
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L+ +TGA+ GIG+AIA AK GA++V+ +E + A + AGG
Sbjct: 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG-------AEAVAAAIRQAGG 61
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 51.3 bits (124), Expect = 7e-10
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
KL G +TG++RGIG+AIA K A G+ ++I + E + A + G
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAV------AEEIANKYGV 57
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding
domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter
oxydans} SCOP: c.2.1.2
Length = 262
Score = 51.4 bits (124), Expect = 7e-10
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ K +G +TGA IG A AL+ A++G I + E + A V +
Sbjct: 2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE-------ALEKAEASVREK 54
Query: 64 GG 65
G
Sbjct: 55 GV 56
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 51.4 bits (124), Expect = 7e-10
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ S T+ ITG+S GIG+ A+ A++GAN+ I +++E
Sbjct: 2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSE 41
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A
{Burkholderia pseudomallei}
Length = 270
Score = 51.4 bits (124), Expect = 7e-10
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L +TGASRGIG+AIAL+ A+ GA ++ A T + + AG
Sbjct: 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGI-------GAAFKQAGL 77
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 51.4 bits (124), Expect = 8e-10
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
KL+G +TGA+ GIG+AIA GA + + +
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRED 62
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 50.9 bits (123), Expect = 8e-10
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G T +TG+SRG+GKAIA K GANIV+ A + A+E + AG
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLD------ATAEEFKAAGI 55
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 51.0 bits (123), Expect = 1e-09
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
M+ + L+G T F+TG SRGIG AIA + A +GA + +
Sbjct: 23 MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVAL 60
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 50.6 bits (122), Expect = 1e-09
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
G+L G I +T A++GIG+A AL A++GA ++ +E+E
Sbjct: 2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES-----------KLQELEKYP 50
Query: 65 G 65
G
Sbjct: 51 G 51
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc;
2.45A {Sinorhizobium meliloti}
Length = 260
Score = 50.6 bits (122), Expect = 1e-09
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ + + ITGAS+GIG + +V +++ +
Sbjct: 20 FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK 63
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 51.1 bits (123), Expect = 1e-09
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
LS ++ +TG ++GIG+ IA A+ GAN+ +AA++
Sbjct: 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 50.7 bits (122), Expect = 1e-09
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
ITGA GIG+A AL A DG + +T + A E+ AG
Sbjct: 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRT-------EVEEVADEIVGAG 76
Query: 65 G 65
G
Sbjct: 77 G 77
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta
protein, NAD(P)-binding rossmann fold, csgid,
oxidoreductase; 1.95A {Francisella tularensis subsp}
Length = 247
Score = 50.6 bits (122), Expect = 1e-09
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L+ +TGASRGIG +A A GA +V A + K +++ G
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-------ENSMKEKGF 54
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 50.6 bits (122), Expect = 1e-09
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L +TG ++ IG A A+ GA ++IA A +++ G
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEA-------MATKAVEDLRMEGH 62
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 50.7 bits (122), Expect = 1e-09
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
G G +TG G+G+ IA + +G ++VI + + + +AA E+
Sbjct: 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDV-------LDAAAGEIGGRT 81
Query: 65 G 65
G
Sbjct: 82 G 82
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 50.6 bits (122), Expect = 1e-09
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
L G ++ +TG ++GIG+ IA A+ GAN+ +A ++
Sbjct: 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA 45
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2
PDB: 2q45_A
Length = 266
Score = 50.6 bits (122), Expect = 1e-09
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L T+ +TG ++GIG AI + A GA I A+ + + + G
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-------LNECLSKWQKKGF 63
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 50.6 bits (122), Expect = 1e-09
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L+ +TGASRGIG+AIAL+ A GA + + ++ G + AGG
Sbjct: 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA------GAADEVVAAIAAAGG 78
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane
alkaloid biosynthesis, reduction of tropinone to
pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium}
SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 50.6 bits (122), Expect = 1e-09
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G T +TG SRGIG I + A GA++ ++ + + + G
Sbjct: 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-------LNDCLTQWRSKGF 58
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus
anthracis}
Length = 246
Score = 50.2 bits (121), Expect = 1e-09
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G +TGASRGIG+AIA+ AK GAN+V+ E E++ G
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN------EVVDEIKKLGS 54
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 50.2 bits (121), Expect = 2e-09
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
IT ++G+GK + K G ++ + + + + + +D
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT------TAMETMKETYKDVEE 57
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 50.2 bits (121), Expect = 2e-09
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G + ITG+S+GIG A A A+ GA + + + A + + GG
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID------ETIASMRADGG 57
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 50.2 bits (121), Expect = 2e-09
Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 11/55 (20%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ +TG GIGK I L + G + + + +
Sbjct: 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK-----------RSADFAKERP 47
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 50.2 bits (121), Expect = 2e-09
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+G+L +TG GIG+A A+ A++GA++ I
Sbjct: 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAIN 79
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics
of infectious diseases; HET: NAD; 2.05A {Bacillus
anthracis str} PDB: 3i3o_A*
Length = 291
Score = 50.2 bits (121), Expect = 2e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+ KL G + ITG GIG+A+++ AK+GANI IA
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIA 77
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 50.2 bits (121), Expect = 2e-09
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G T +TG S+GIG AI + A GA + ++ + + + + G
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK-------ELDECLEIWREKGL 70
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 50.2 bits (121), Expect = 2e-09
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
+L + ITGA+ GIG+A AK+GA +V P
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP 41
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 50.3 bits (121), Expect = 2e-09
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ +TGA++ IG+AIA+K + G +VI
Sbjct: 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI 52
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 49.9 bits (120), Expect = 2e-09
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G T +TG++ GIGKAIA +GAN++I + E + KE+
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREE-------NVNETIKEIRAQYP 59
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD;
1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 49.8 bits (120), Expect = 2e-09
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+TGA +GIGKAIAL+ KDG + IA T + A E+ AGG
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA-------TAKAVASEINQAGG 51
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 49.9 bits (120), Expect = 2e-09
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
+TGA+ GIG IA + K+G + + A+ E KE+ +AG
Sbjct: 18 ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-------LKELREAG 70
Query: 65 G 65
Sbjct: 71 V 71
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain
dehydrogenase/REDU SDR, fungi, oxidoreductase; HET:
GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A*
3qwi_A* 3itd_A
Length = 270
Score = 49.9 bits (120), Expect = 2e-09
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
G+L G +TG+ RGIG A+A+ + GA +V+
Sbjct: 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVV 47
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe
grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 49.9 bits (120), Expect = 3e-09
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ L G +TGA RGIG+ +A++ + G +++
Sbjct: 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIV 58
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 49.9 bits (120), Expect = 3e-09
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
T +TG GIGK +A GA+++I + + + A +E+E G
Sbjct: 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDK-------LAGAVQELEALGA 60
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 49.8 bits (120), Expect = 3e-09
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
LSG ITGAS GIGK +AL A+ GA + +AA+ ++ A E+ GG
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV-------VADEIAGVGG 81
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 49.4 bits (119), Expect = 3e-09
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ +TGASRGIG++IAL+ A++G N+ + ++ + + +E++ G
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE------AVVEEIKAKGV 54
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus
suis} PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 49.9 bits (120), Expect = 3e-09
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G +TGAS GIG AIA AK GA IV E + + AG
Sbjct: 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDR-------GMAAYKAAGI 83
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 49.9 bits (120), Expect = 3e-09
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G +TG+S GIG A+A A+ GA++ I + K A + G
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-------AEHLQKTYGV 83
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 49.5 bits (119), Expect = 3e-09
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
K +TGA G+G+A+A+ A G + +A + +
Sbjct: 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA 64
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 49.5 bits (119), Expect = 3e-09
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
++ +TG +RGIG AIA + A DG + + + +
Sbjct: 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA 51
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas;
oxidoreductase; 1.99A {Streptomyces coelicolor}
Length = 253
Score = 49.5 bits (119), Expect = 4e-09
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
++ +TG +RGIG AIA A G + I ++ EP
Sbjct: 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP 57
>2jah_A Clavulanic acid dehydrogenase; short-chain
dehydrogenase/reductase, lactamase inhibitor, AN
biosynthesis, NADPH, oxidoreductase; HET: MSE NDP;
1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Length = 247
Score = 49.4 bits (119), Expect = 4e-09
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
L G ITGAS GIG+A A A +GA + IAA
Sbjct: 2 PSALQGKVALITGASSGIGEATARALAAEGAAVAIAA 38
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 49.0 bits (118), Expect = 4e-09
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L + +TGA GIG+AIA K A + + +V + + +E+ G
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED-------RLNQIVQELRGMGK 56
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent
reductase, short chain dehydrogenase/reductase,
oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter
frateurii} PDB: 3ai2_A* 3ai1_A*
Length = 263
Score = 49.1 bits (118), Expect = 5e-09
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+SG ITG+S GIG AIA AK+GA+IV+ A+ + ++ AA+ +++ G
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR-------LHEAARSLKEKFG 56
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin
salvage, drug resistance; HET: NAP FE1; 2.61A
{Leishmania major} SCOP: c.2.1.2
Length = 328
Score = 49.4 bits (118), Expect = 5e-09
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ +TGA++ +G++IA +G + +
Sbjct: 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCL 75
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 49.0 bits (118), Expect = 5e-09
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
L+G + +TGA +GIG+ GA +V ++T
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA 42
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 48.9 bits (117), Expect = 5e-09
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ +TGA++ +G++IA +G + +
Sbjct: 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCL 38
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 48.7 bits (117), Expect = 5e-09
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+TG+SRG+GKA A++ A++G NIVI
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVI 33
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet
of seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 48.7 bits (117), Expect = 6e-09
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
+ + ITG+S GIG+A A+ A++GA + I + AE + +++ AG
Sbjct: 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE-------RLEETRQQILAAG 54
Query: 65 G 65
Sbjct: 55 V 55
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase;
HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 48.6 bits (117), Expect = 6e-09
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
SGL +TGA +GIG+ GA +V +T
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS 42
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ;
1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 48.8 bits (117), Expect = 6e-09
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ L+G TGA RGIG+ IA++ + GA++V+
Sbjct: 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVV 50
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium
meliloti}
Length = 280
Score = 48.7 bits (117), Expect = 7e-09
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+L G +TGAS GIG+A AL A++GA +V+ A+ + E+
Sbjct: 3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA-------LAELTDEIAGG 55
Query: 64 GG 65
GG
Sbjct: 56 GG 57
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 48.7 bits (117), Expect = 7e-09
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
ITGASRGIG+AIA A+DG + + A++ +
Sbjct: 4 VAVITGASRGIGEAIARALARDGYALALGARSVD 37
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 48.8 bits (117), Expect = 7e-09
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
T F+TG S GIG A+A A G + A+ A+ + +A + AG
Sbjct: 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN-------VSAAVDGLRAAGH 73
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 48.4 bits (116), Expect = 7e-09
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ T ITG++ GIG AIA AK GANIV+ A + + EV
Sbjct: 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIR------TVTDEVAGLSS 75
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 48.7 bits (117), Expect = 7e-09
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 11/65 (16%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
M + +G + +TG RGIG I GA +VI K + +
Sbjct: 1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES-----------GGRAL 49
Query: 61 EDAGG 65
E
Sbjct: 50 EQELP 54
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 48.7 bits (117), Expect = 7e-09
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G +TG SRG+G IA A+ G ++V+A++ E + +A K E G
Sbjct: 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE------AAQKLTEKYGV 71
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 48.4 bits (116), Expect = 8e-09
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ ITG +R IG +IA++ + G +V+
Sbjct: 5 SHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVV 40
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 48.4 bits (116), Expect = 8e-09
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
G T+FITGA+ G G+A A + A+ G ++V+
Sbjct: 17 GSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTG 52
>2ehd_A Oxidoreductase, oxidoreductase, short-chain
dehydrogenase/reducta; rossman fold, structural
genomics, NPPSFA; 2.40A {Thermus thermophilus}
Length = 234
Score = 48.3 bits (116), Expect = 9e-09
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAA 40
+ ITGASRGIG+A A G + + A
Sbjct: 7 AVLITGASRGIGEATARLLHAKGYRVGLMA 36
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 48.3 bits (116), Expect = 9e-09
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+ I ITGAS GIG+ IA + GA I++ A
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGA 35
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative,
joint CE structural genomics; HET: NAD; 2.50A
{Thermotoga maritima} SCOP: c.2.1.2
Length = 249
Score = 48.3 bits (116), Expect = 9e-09
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ + + ASRGIG+A+A +++GA + I A+ E
Sbjct: 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE 54
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 48.2 bits (116), Expect = 9e-09
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
M L+G T +TG++RG+G A A A GA +++ A + + +
Sbjct: 1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-------LAESVDTL 53
Query: 61 EDAGG 65
G
Sbjct: 54 TRKGY 58
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET:
NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 48.3 bits (116), Expect = 9e-09
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
G +G + +TG +RGIG+AIA A++GA + + E
Sbjct: 2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE 41
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 48.3 bits (116), Expect = 9e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
SG +++TGA +GIG A AL + GA + +
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT 42
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative,
EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia
cavernae}
Length = 273
Score = 48.3 bits (116), Expect = 1e-08
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
M L+G T +TGA GIG+AIA A+ GA+++ +T A E+
Sbjct: 23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK--------EVADEI 74
Query: 61 EDAGG 65
D GG
Sbjct: 75 ADGGG 79
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A
{Bacillus anthracis str}
Length = 255
Score = 47.9 bits (115), Expect = 1e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
L G +TGASRGIG+AIA + A DGA + I
Sbjct: 2 NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAI 36
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 47.9 bits (115), Expect = 1e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
I ITGAS G+G +A +G + ++
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSES 36
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 48.0 bits (115), Expect = 1e-08
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
++G +TGA++GIG+A A GA + +
Sbjct: 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALV 37
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 47.9 bits (115), Expect = 1e-08
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ +TGASRGIG AIA + A DG +VI
Sbjct: 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVI 56
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative;
1.87A {Rhodopseudomonas palustris}
Length = 252
Score = 47.7 bits (114), Expect = 1e-08
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ T+ + GA IG IA K A +G + + E L E+E A
Sbjct: 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL-------VAEIEAA 54
Query: 64 GG 65
GG
Sbjct: 55 GG 56
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 47.9 bits (115), Expect = 1e-08
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ G +TGA+ GIG A+ GA + +A +
Sbjct: 20 FQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63
>4e4y_A Short chain dehydrogenase family protein; structural genomics,
the center for structural genomics of I diseases,
csgid, niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 47.5 bits (114), Expect = 1e-08
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ +TG S+GIGKA+ ++ + VI +
Sbjct: 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ 39
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A*
1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 47.7 bits (114), Expect = 1e-08
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
L+ + A GIG + + K + E
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 47.5 bits (114), Expect = 1e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
LS +TG S GIG A + GA + A+ E
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER 44
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural
genomics, secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 47.5 bits (114), Expect = 1e-08
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
ITGASRGIG+AIAL+ A+DG + I + A+E G
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE------EVAEEARRRGS 51
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 47.7 bits (114), Expect = 1e-08
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
L G +TGA+RGIG IA A+DGA +V
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAID 244
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 47.6 bits (114), Expect = 1e-08
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+ ITGAS GIG+AIA + +++G +++ A
Sbjct: 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo
sapiens} SCOP: c.2.1.2
Length = 272
Score = 47.6 bits (114), Expect = 2e-08
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
++G + ITGA GIG+ A + AK + +V+ + A + + G
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH-------GLEETAAKCKGLGA 80
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 47.6 bits (114), Expect = 2e-08
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 14 ITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+T G AL+ ++ G + ++ +
Sbjct: 6 VTNVKHFGGMGSALRLSEAGHTVACHDESFK 36
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 47.2 bits (113), Expect = 2e-08
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIA 39
+TG ++GIG+ I+ K A DG +I +A
Sbjct: 4 VAMVTGGAQGIGRGISEKLAADGFDIAVA 32
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 47.1 bits (113), Expect = 2e-08
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ G +T S G+G A AL+ A++GA +++ ++ E
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNRE 42
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides}
PDB: 2wdz_A* 3lqf_A*
Length = 254
Score = 47.1 bits (113), Expect = 2e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
+L G +TGA GIG I A GA +++ + A
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAA 47
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 47.2 bits (113), Expect = 2e-08
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
L G T +TG++ GIG IA A+ GANIV+ A E+ G
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA---------PALAEIARHGV 51
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold,
rossmann fold, oxidoreductase; HET: NAP; 2.30A
{Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 47.1 bits (113), Expect = 2e-08
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ +TGASRGIGKAIAL K G +++ + + +K++E GG
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE------EVSKQIEAYGG 51
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 46.8 bits (112), Expect = 3e-08
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
L G +TG++ GIG IA A GA+IV+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLN 34
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 47.0 bits (112), Expect = 3e-08
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEP 45
L +TGASRG G+A+A + A+ G+ ++++A++
Sbjct: 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM 45
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 46.8 bits (112), Expect = 3e-08
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
KL+G ITG + G+G+A+ + +GA + + K+AE + GG
Sbjct: 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE----------RLRELEVAHGG 51
>4dqx_A Probable oxidoreductase protein; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.00A {Rhizobium etli}
Length = 277
Score = 46.8 bits (112), Expect = 3e-08
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+ L+ +TG GIG+A A AK+GA +V+A
Sbjct: 19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA 57
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 46.8 bits (112), Expect = 4e-08
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
L G ITGA++GIG IA A GA +V++ +
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSE 56
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 46.4 bits (111), Expect = 4e-08
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
L+G +TG SRGIG+ IA + GA + I A+ AE A + G
Sbjct: 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA-------CADTATRLSAYG 77
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 46.4 bits (111), Expect = 4e-08
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
T + + + ITG G+G+A A++ A +GA + + ++E + ++ V +
Sbjct: 8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE-------GLEASKAAVLET 60
Query: 64 GG 65
Sbjct: 61 AP 62
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 46.4 bits (111), Expect = 4e-08
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
L + +TGAS GIG+AIA + +G+ ++
Sbjct: 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL 38
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 46.4 bits (111), Expect = 4e-08
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 10/62 (16%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
T +L ITGA GIG + A+ GA +V+A A
Sbjct: 6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPET----------DLAGAAASV 55
Query: 64 GG 65
G
Sbjct: 56 GR 57
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics;
1.95A {Mycobacterium smegmatis}
Length = 266
Score = 46.4 bits (111), Expect = 4e-08
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 GKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAE 44
G L G + +T A+ GIG A +A +GA++VI+
Sbjct: 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER 58
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 46.5 bits (111), Expect = 4e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+ +TGAS GIG A+A + G +V A
Sbjct: 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 46.4 bits (111), Expect = 5e-08
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+S ++TG GIG +I + KDG +V P ++ + G
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV------KWLEDQKALGF 63
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A
{Burkholderia pseudomallei 1710B}
Length = 269
Score = 46.0 bits (110), Expect = 5e-08
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ F+TG G+G AI+ + G + ++ H + DAG
Sbjct: 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVS------TWLMHERDAGR 75
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 46.0 bits (110), Expect = 5e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ L G ITGA G G+ +A + AK GA +VI +
Sbjct: 3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA 44
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 46.0 bits (110), Expect = 6e-08
Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 6/52 (11%)
Query: 14 ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+T A G A +DG +V + E E+ G
Sbjct: 6 VTHARHFAGPAAVEALTQDGYTVVCHDASFA------DAAERQRFESENPGT 51
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 45.9 bits (109), Expect = 6e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+G T F+TG + G+G + + G + IA
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIAD 39
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 46.0 bits (110), Expect = 7e-08
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+ + +TG S GIG A+ + GA +V
Sbjct: 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSV 44
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 45.7 bits (109), Expect = 7e-08
Identities = 7/45 (15%), Positives = 13/45 (28%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
++ G I + G S +G + N + P
Sbjct: 14 LVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 45.6 bits (109), Expect = 8e-08
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+ +L G ITG + GIG AIA K ++GA ++I
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT 36
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 45.7 bits (109), Expect = 8e-08
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 9 GLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
G I +TG SRGIGK+I + V+
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYG 33
>3tjr_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium
subsp}
Length = 301
Score = 45.4 bits (108), Expect = 9e-08
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
G +TG + GIG A A + A+ GA +V++ + A + G
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP-------ALEQAVNGLRGQG 79
Query: 65 G 65
Sbjct: 80 F 80
>3e9n_A Putative short-chain dehydrogenase/reductase; structural
genomics, unknown function, oxidoreductase, PSI- 2;
2.40A {Corynebacterium glutamicum}
Length = 245
Score = 45.2 bits (108), Expect = 1e-07
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
L +TGA+ G+G I ++D +
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALG 35
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 45.4 bits (108), Expect = 1e-07
Identities = 4/60 (6%), Positives = 9/60 (15%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ + G +G + + E A
Sbjct: 2 AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQA 61
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 45.2 bits (108), Expect = 1e-07
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
T +L+ ITGA+ GIG A A + +GA + I + +
Sbjct: 24 TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD 64
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB:
3vc7_A
Length = 255
Score = 45.2 bits (108), Expect = 1e-07
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
G G + G + G+G A + + GA +++ +
Sbjct: 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNES 43
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 45.2 bits (108), Expect = 1e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+G+L+G ++G +RG+G + +GA +V
Sbjct: 2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG 37
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 44.8 bits (107), Expect = 1e-07
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 14 ITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+TG SRGIG+AIA G + IA++ E
Sbjct: 7 VTGGSRGIGRAIAEALVARGYRVAIASRNPE 37
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 44.9 bits (107), Expect = 1e-07
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
Query: 11 TIFITGASRGIGKAIALKAAKDGAN-------IVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
+ ITGA +GIG+AIAL+ A+ + +V++++TA K+ + E
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-------SLECRAE 56
Query: 64 GG 65
G
Sbjct: 57 GA 58
>3gvc_A Oxidoreductase, probable short-chain type
dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG,
SBRI, structural genomics; 2.45A {Mycobacterium
tuberculosis}
Length = 277
Score = 44.8 bits (107), Expect = 2e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
N L+G +TGA GIG A+A + A +G +++ A
Sbjct: 23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA 59
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 44.8 bits (107), Expect = 2e-07
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
T +L G +TG + G+G + +GA + +
Sbjct: 1 TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFS 36
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 44.5 bits (106), Expect = 2e-07
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
L G + +TGAS +G+G A A+ GA + I + + KE+E
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAE------ENVKELEKT 70
Query: 64 GG 65
G
Sbjct: 71 YG 72
>3qlj_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 44.3 bits (105), Expect = 3e-07
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
G + G + +TGA GIG+A AL A +GA +V+
Sbjct: 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVV 56
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family,
rossmann-fold, short-chain dehydrogenase/reducta
ALLO-threonine dehydrogenase; 1.90A {Escherichia coli}
PDB: 3asv_A*
Length = 248
Score = 44.1 bits (105), Expect = 3e-07
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 10 LTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+ + +TGA+ G G+ I + + G ++
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATG 31
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 43.9 bits (104), Expect = 3e-07
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
M + + G + +TGA G+G+A AL A+ GA +V+
Sbjct: 1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVV 38
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase;
HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2
PDB: 2hsd_A*
Length = 254
Score = 43.6 bits (104), Expect = 4e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
LSG T+ ITG +RG+G A +A GA +V+A
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLA 35
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 43.4 bits (103), Expect = 5e-07
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
M+ + G + ++G + G+G+A + DG +VIA
Sbjct: 22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIA 60
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 43.4 bits (102), Expect = 6e-07
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
+TG ++GIG I + + +G +V+
Sbjct: 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 42.9 bits (102), Expect = 7e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+T +L ITG + GIG+ A + GA +VIA
Sbjct: 10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP;
2.60A {Saccharomyces cerevisiae}
Length = 287
Score = 42.7 bits (101), Expect = 9e-07
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDG---ANIVIAA 40
+L+ T+ ITGAS GIGKA AL+ + +++AA
Sbjct: 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAA 67
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 42.8 bits (101), Expect = 9e-07
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
M+ + K I ITGAS G G+ A A G + +
Sbjct: 1 MVMSKK----IILITGASSGFGRLTAEALAGAGHRVYASM 36
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins
(A/B), NAD(P)-binding rossmann-fold structural
genomics, NPPSFA; HET: NAP; 2.20A {Thermus
thermophilus}
Length = 207
Score = 42.5 bits (101), Expect = 1e-06
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP 45
+ + ITGA+ G+G A A G +++++ + A
Sbjct: 1 MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGA 34
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 42.6 bits (101), Expect = 1e-06
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ T+ ITGA+ G+G A + A+ GA +++A +
Sbjct: 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTR 51
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 42.1 bits (100), Expect = 1e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 13 FITGASRGIGKAIALKAAKDGANIVIA 39
+TGAS G G AIA + G +
Sbjct: 6 IVTGASSGNGLAIATRFLARGDRVAAL 32
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 42.3 bits (100), Expect = 1e-06
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+S + + G +G AI K+G ++
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNI 33
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 42.4 bits (100), Expect = 1e-06
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
+ ITGA G+GK +L+ AK GA +V+
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVV 37
Score = 35.4 bits (82), Expect = 3e-04
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
T L + ITGA G+GK A AK GA +V+
Sbjct: 314 GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV 351
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 41.9 bits (99), Expect = 2e-06
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA 40
M + K +TGAS G G+AIA A G + VI
Sbjct: 1 MSESAK----VWLVTGASSGFGRAIAEAAVAAG-DTVIGT 35
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 41.4 bits (98), Expect = 3e-06
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+L +TGAS G+G A+ A++GA ++
Sbjct: 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGL 37
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 41.1 bits (97), Expect = 3e-06
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
++ +TG + G+G A + GA +V+
Sbjct: 6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL 39
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 41.1 bits (97), Expect = 4e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA 39
+ GL ITG + G+G A A + GA+ V+
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLL 42
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 40.1 bits (94), Expect = 8e-06
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 11 TIFITGASRGIGKAIALKAAKDGAN--IVIAA 40
+ ITG S GIG +A++ A D + V A
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYAT 35
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 39.9 bits (94), Expect = 9e-06
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 10/55 (18%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
I ITG++ GIG A+ A+ G ++ + ++ GG
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQAD----------IEADLSTPGG 47
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 39.8 bits (93), Expect = 1e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI 38
G +TGA G+G+ AL A+ GA +V+
Sbjct: 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVV 48
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 39.2 bits (92), Expect = 2e-05
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47
+ + I + GAS +G A+ + K A ++ A + +
Sbjct: 2 NAMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDVT 40
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5
P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A*
3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 39.3 bits (92), Expect = 2e-05
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 8 SGLTIFITGASRGIGKAIALK-AAKDGANIVIAA 40
+TG ++GIG AI ++V+ A
Sbjct: 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTA 36
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short
chain dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 38.5 bits (90), Expect = 3e-05
Identities = 10/34 (29%), Positives = 12/34 (35%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
I I+G + GIG A G IV
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 242
Score = 37.6 bits (88), Expect = 5e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIA 39
+ +TG + G+G+A AL G +V+
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVL 32
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 37.3 bits (87), Expect = 6e-05
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 11 TIFITGASRGIGKAIA---LKAAKDGANIVIAAKTAEPHPKL 49
+I ITG +RG+G + L + ++ + E +L
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL 64
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 36.5 bits (85), Expect = 1e-04
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAA 40
++ +TGA+RGIG + + KD I A
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIA 34
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 36.0 bits (83), Expect = 2e-04
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ G + + +G A A +GA +V+ + +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.6 bits (71), Expect = 0.010
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 22/83 (26%)
Query: 2 INTGKLSGLT------IF--ITGASRGIGKAIALKAAKDGAN--------------IVIA 39
+ T KL G T TG S+G+ A+A+ + I +
Sbjct: 250 VVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVR 309
Query: 40 AKTAEPHPKLPGTIYSAAKEVED 62
A P+ LP +I + E +
Sbjct: 310 CYEAYPNTSLPPSILEDSLENNE 332
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design,
oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex
aeolicus} PDB: 2hk8_A 2hk7_A
Length = 275
Score = 29.4 bits (67), Expect = 0.044
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ +I + GA G +A+ K+GA + + +T E
Sbjct: 127 VKEKSILVLGAG-GASRAVIYALVKEGAKVFLWNRTKE 163
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural
genomics, APC7755, NADP, P protein structure
initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Length = 236
Score = 28.5 bits (64), Expect = 0.11
Identities = 8/49 (16%), Positives = 18/49 (36%)
Query: 3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPG 51
G+ + + GA+ + + + + G V + E P+L
Sbjct: 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE 63
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 28.0 bits (63), Expect = 0.13
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPG 51
IFI G++ +GK++ + I A+ E P+
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN 42
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima
dehydrogenase; shikimate, NADPH, dehydroshikimate,
bifunctional enzyme; HET: DHK TLA NAP; 1.78A
{Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Length = 523
Score = 27.8 bits (62), Expect = 0.19
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
L+ T+ + GA G GKA+A A + GA +VIA +T E
Sbjct: 360 SPLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYE 398
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding,
fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Length = 422
Score = 27.4 bits (60), Expect = 0.24
Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 14 ITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTI-----YSAAKEVEDAGGY 66
+ GAS G G A + AA GA+ + GT + K + AG Y
Sbjct: 66 VIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY 124
>1xq6_A Unknown protein; structural genomics, protein structure
initiative, CESG, AT5G02240, NADP, center for
eukaryotic structural genomics; HET: NAP; 1.80A
{Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A*
2q46_A* 2q4b_A*
Length = 253
Score = 27.1 bits (60), Expect = 0.36
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAA 40
T+ +TGAS G+ + K + V
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKG 35
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 26.7 bits (59), Expect = 0.51
Identities = 5/29 (17%), Positives = 9/29 (31%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIA 39
+ I GA I + + + A
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTL 53
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET:
NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A
2vrc_D
Length = 287
Score = 26.5 bits (59), Expect = 0.53
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 11 TIFITGASRGIGKAIA--LKAAKDGANIVIAAKTAEPHPKLPG 51
+I +TGA+ +G + L + I+ + E L
Sbjct: 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD 44
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 26.6 bits (58), Expect = 0.54
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYS 55
++I I G S +G A+A +A D + P P T +
Sbjct: 228 VSITICGHS--LGAALATLSATDIVANGYNRPKSRPDKSCPVTAFV 271
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold,
structural genomics; HET: NAP F42; 1.65A {Archaeoglobus
fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Length = 212
Score = 26.4 bits (57), Expect = 0.59
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ + + G + +GK +AL+ A G IV+ ++ E
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE 35
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL
oxidoreductase, alpha/beta domain, rossmann fold; HET:
SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A*
3phj_A*
Length = 269
Score = 26.4 bits (59), Expect = 0.59
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ + I GA G KA+A + K G + + +++
Sbjct: 115 QKNYQNALILGAG-GSAKALACELKKQGLQVSVLNRSSR 152
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM
degradation, flavin reductase, diaphorase, green HAEM
binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP:
c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Length = 206
Score = 26.1 bits (58), Expect = 0.62
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 11 TIFITGASRGIGKAIALKAAKDG 33
I I GA+ G +A + G
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAG 27
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1,
ATP-grAsp domain, carbamoylphosphate synthase subunit
(split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Length = 331
Score = 26.3 bits (58), Expect = 0.62
Identities = 6/53 (11%), Positives = 11/53 (20%), Gaps = 4/53 (7%)
Query: 10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
+ IT A R + A+ P + +
Sbjct: 5 PHLLITSAGRRAKLVEYFVKEFKTGRVST----ADCSPLASALYMADQHYIVP 53
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET:
NDP; 1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 26.1 bits (57), Expect = 0.75
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPG 51
I + GA+ G AI +A + G ++ + + G
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG 42
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann
fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A*
1ad3_A*
Length = 469
Score = 25.6 bits (57), Expect = 1.0
Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 19/48 (39%)
Query: 12 IFITGASRGIGKAIALKAAK------------------DGANIVIAAK 41
I TG S G+GK I AAK ++ +A +
Sbjct: 200 ILYTG-STGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus
halodurans}
Length = 293
Score = 25.7 bits (56), Expect = 1.2
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 1 MINTGK-LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47
+ +T + G + + G R +G ++A K A GA + + A+ ++
Sbjct: 146 IQHTDFTIHGANVAVLGLGR-VGMSVARKFAALGAKVKVGARESDLLA 192
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta
protein., structural genomics, PSI-2, protein STR
initiative; 1.60A {Staphylococcus aureus subsp}
Length = 289
Score = 25.3 bits (56), Expect = 1.4
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIAA 40
I +TGA+ +G I +A + +
Sbjct: 2 NIMLTGATGHLGTHITNQAIANHIDHFHIG 31
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula
dsm 2008} PDB: 3r14_A*
Length = 221
Score = 25.0 bits (54), Expect = 1.8
Identities = 5/29 (17%), Positives = 9/29 (31%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVIA 39
I I GA+ I + + +
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITL 35
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde
dehyd adduct, covalent catalysis, mandelate racemase
pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB:
3lv1_A*
Length = 457
Score = 25.0 bits (55), Expect = 1.8
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 19/48 (39%)
Query: 12 IFITGASRGIGKAIALKAAK------------------DGANIVIAAK 41
IF TG S +GK + AAK A++
Sbjct: 210 IFFTG-SPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVN 256
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich,
flavoprotein, structural genomics protein structure
initiative; 1.83A {Streptococcus pneumoniae}
Length = 232
Score = 24.9 bits (55), Expect = 1.8
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 13 FITGASRG-IGKAIALKAAKDGAN-IVIAAKTAEPHPKLPG 51
IT S G +GK I G +I K A P
Sbjct: 22 SITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPN 62
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent
epimerase/dehydratase, LMR162, NESG, structural
genomics, PSI-2; 2.73A {Listeria monocytogenes}
Length = 221
Score = 24.9 bits (54), Expect = 2.0
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLP 50
I I GA+ G I +A G + + A +
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH 41
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty
acid biosynthesis II, short-chain dehydrogenase
reductase superfamily; HET: NAI; 1.80A {Yersinia
pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Length = 405
Score = 25.1 bits (54), Expect = 2.2
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 9 GLTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTI 53
+ + GAS G G A + AA GA+ + PGT
Sbjct: 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTS 92
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 24.9 bits (53), Expect = 2.2
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 5/26 (19%)
Query: 6 KL-SGLTIFITGASRGIGKAIALKAA 30
KL + L ++ ++ A+A+KA
Sbjct: 24 KLQASLKLYADDSA----PALAIKAT 45
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P
reductase, oxidoreductase; 2.60A {Eimeria tenella}
Length = 319
Score = 24.8 bits (54), Expect = 2.6
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 4 TGKLSGLTIFITG-AS-RGIGKAIALKAAKDGANIVI 38
L G T F+ G A G G AI GA +++
Sbjct: 4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLV 40
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold,
structural GE joint center for structural genomics,
JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Length = 349
Score = 24.5 bits (54), Expect = 2.9
Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 1 MINTGKLS-GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
M + K +T + + K I A ++G ++ + E
Sbjct: 156 MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDE 200
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein
structure initiative; 2.20A {Lactobacillus plantarum}
Length = 324
Score = 24.2 bits (53), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP 47
L+G + I G + IG+++A KA+ G +++ T P
Sbjct: 135 LTGQQLLIYGTGQ-IGQSLAAKASALGMHVIGVNTTGHPAD 174
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center
for structural genomics of infec diseases, csgid; 2.10A
{Salmonella enterica subsp} PDB: 3kbo_A
Length = 315
Score = 23.8 bits (52), Expect = 4.5
Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 4 TGKLSGLTIFITGASRG-IGKAIALKAAKDGANIVIAAKTAEPHP 47
++ I GA G +G +A G + +++ + P
Sbjct: 134 EYTREEFSVGIMGA--GVLGAKVAESLQAWGFPLRCWSRSRKSWP 176
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 23.9 bits (52), Expect = 4.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 11 TIFITGASRGIGKAIALKAAKDG 33
I + GAS +G A+ +A G
Sbjct: 6 KIVLIGASGFVGSALLNEALNRG 28
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft
separation, oxidoreductase; HET: NAP; 1.50A {Escherichia
coli} SCOP: c.2.1.7 c.58.1.5
Length = 271
Score = 23.6 bits (52), Expect = 4.8
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
GL I + GA G + + L + I +T
Sbjct: 117 RPGLRILLIGAG-GASRGVLLPLLSLDCAVTITNRTVS 153
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan,
rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A
{Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Length = 315
Score = 24.0 bits (52), Expect = 4.9
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 7 LSGLTIFITG-AS-RGIGKAIALKAAKDGANIVI 38
L G T F+ G A G G AIA A GA + +
Sbjct: 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVAL 40
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan,
enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A
{Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A*
1cwu_A*
Length = 297
Score = 23.9 bits (52), Expect = 4.9
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 7 LSGLTIFITG-AS-RGIGKAIALKAAKDGANIVI 38
L G FI G A G G A+A A GA I++
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILV 39
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint
center for structural genomics, JCSG, protein structure
initiative, PSI-2; HET: MSE; 1.33A {Neisseria
gonorrhoeae}
Length = 232
Score = 23.9 bits (52), Expect = 5.1
Identities = 7/43 (16%), Positives = 11/43 (25%), Gaps = 4/43 (9%)
Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIY 54
+ I G K A G N H + ++
Sbjct: 191 LAIQGE----EKKAVFDQAAQGENREYPISLVLNHQGVNCHVF 229
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A
{Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB:
1p74_A*
Length = 272
Score = 23.6 bits (52), Expect = 5.9
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ I GA G K + L + NIV+A +T
Sbjct: 117 RPNQHVLILGAG-GATKGVLLPLLQAQQNIVLANRTFS 153
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE NDP; 1.70A
{Ralstonia eutropha}
Length = 379
Score = 23.3 bits (50), Expect = 6.7
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1 MINTGKL-SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
M+ T +L + T A+ +G+ + KDG +V + E
Sbjct: 163 MVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE 207
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural
genomics, NPPSFA, Na project on protein structural and
functional analyses; HET: SKM; 1.65A {Thermus
thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Length = 263
Score = 23.3 bits (51), Expect = 7.2
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
+ GA G G+A+A + G + + +T +
Sbjct: 119 ALVLGAG-GAGRAVAFALREAGLEVWVWNRTPQ 150
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding,
oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB:
3rfv_A* 3rfx_A*
Length = 267
Score = 23.1 bits (50), Expect = 7.8
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 11 TIFITGASRGIGKAIALKAAKDGANIVI 38
+ +TGA+ +G+ + + A + +
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEILRL 32
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain
dehydrogenase/reductase, oxidoreductase, 2-ENOY
thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Length = 357
Score = 23.4 bits (51), Expect = 8.1
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE 44
G ++ ++ G+G+A+ AA G + +
Sbjct: 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND
biology, protein structure initiative, midwest center
for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter
pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A*
3qy0_A* 2qmo_A
Length = 242
Score = 22.9 bits (49), Expect = 9.1
Identities = 8/36 (22%), Positives = 12/36 (33%), Gaps = 6/36 (16%)
Query: 11 TIFITGASRGIGK-----AIALKAAKDGANIVIAAK 41
+FI+ + GK +A G I K
Sbjct: 23 MLFISATNTNAGKTTCARLLAQYCNACGVK-TILLK 57
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.132 0.364
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,021,257
Number of extensions: 54021
Number of successful extensions: 405
Number of sequences better than 10.0: 1
Number of HSP's gapped: 402
Number of HSP's successfully gapped: 254
Length of query: 66
Length of database: 6,701,793
Length adjustment: 37
Effective length of query: 29
Effective length of database: 5,668,716
Effective search space: 164392764
Effective search space used: 164392764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (23.2 bits)