BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6118
(660 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo
sapiens GN=ADCK3 PE=1 SV=1
Length = 647
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/488 (50%), Positives = 339/488 (69%), Gaps = 1/488 (0%)
Query: 168 SKLGYKKAMELTKKKDAFAVVDEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGR 227
S +G+++ + + ED+ +A A ++K L+ A++RKVP +R+GR
Sbjct: 154 SAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARPENKQHKQTLSEHARERKVPVTRIGR 213
Query: 228 MVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGA 287
+ +FG LA GLG G +AEV +++L D S S F++ ANAERIV TLCKVRGA
Sbjct: 214 LANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGA 273
Query: 288 ALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDL 347
ALK+GQ+LSIQD I+P L K FERVRQSADFMP Q+ K L +LGP+W+ KL +
Sbjct: 274 ALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEE 333
Query: 348 KPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDN 407
+PFAAASIGQVH +K G EVAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++
Sbjct: 334 RPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEH 393
Query: 408 LVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPV 467
L++V ++EL E DY+REA C RKF++L++ +P+++VP ++DEL + +LTTEL+ G P+
Sbjct: 394 LIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPL 453
Query: 468 DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRA 527
DQ L E R IC ++ LCLRELF+F +MQTDPNWSNFFY+ ++ LLDFGATR
Sbjct: 454 DQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATRE 513
Query: 528 YSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEK 587
Y + F D YIQ+I+A AD D++ V S +M FLTGYE K+ME+AH++ ++IL E F+
Sbjct: 514 YDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASD 573
Query: 588 IGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPM 647
FDFG Q TT++I L+P +L HRL PPPEE YSLHRK+ G FL+CSKLK + C M
Sbjct: 574 -EPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAM 632
Query: 648 LKDVYDNY 655
++ Y NY
Sbjct: 633 FEEAYSNY 640
>sp|Q60936|ADCK3_MOUSE Chaperone activity of bc1 complex-like, mitochondrial OS=Mus
musculus GN=Adck3 PE=2 SV=2
Length = 645
Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/467 (53%), Positives = 337/467 (72%), Gaps = 3/467 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG+G +AEV +
Sbjct: 173 EDIEKARQA-KARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGIGALAEVAK 231
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L +S+ S F++ ANAERIV+TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 232 KSLRSENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLA 291
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K FERVRQSADFMP Q+ K L ++LGP W+ KL + +PFAAASIGQVH +K G E
Sbjct: 292 KIFERVRQSADFMPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKGGRE 351
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA
Sbjct: 352 VAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAY 411
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
+KF+EL++ +P+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ L
Sbjct: 412 AKKFRELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVL 471
Query: 489 CLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDK 548
CLRELF+F MQTDPNWSNFFY+ ++ LLDFGATR Y + F D YIQVI+A AD D+
Sbjct: 472 CLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDR 531
Query: 549 DKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPT 608
+ VL S +M FLTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P
Sbjct: 532 EAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPV 590
Query: 609 ILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
+L HRL PPPEE YSLHRK+ G FL+CSKLK + C M ++ Y NY
Sbjct: 591 MLKHRLIPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637
>sp|Q29RI0|ADCK3_BOVIN Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus
GN=ADCK3 PE=2 SV=1
Length = 648
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/467 (53%), Positives = 338/467 (72%), Gaps = 3/467 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG G +AEV +
Sbjct: 176 EDIEKARQA-KARPESKPHKQALSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAK 234
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L D S S F++ ANAERIV TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 235 KSLRPDDPSGKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLA 294
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K F+RVRQSADFMP Q+ K L +LGP+W+ KL + +PFAAASIGQVH LK G E
Sbjct: 295 KIFDRVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARLKGGRE 354
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA C
Sbjct: 355 VAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAAC 414
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
R+F+EL++ +P+++VP ++DEL + +LTTEL+ G P+DQ L E R IC ++ L
Sbjct: 415 ARRFRELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVL 474
Query: 489 CLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDK 548
CLRELF+F++MQTDPNWSNFFY+ + ++ LLDFGATR + + F D YIQ+I+A A+ D+
Sbjct: 475 CLRELFEFQFMQTDPNWSNFFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAAANQDR 534
Query: 549 DKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPT 608
+ VL S +M FLTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P
Sbjct: 535 EAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPI 593
Query: 609 ILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
+L HRL PPPEE YSLHRK+ G FL+CSKLK + C M ++ Y NY
Sbjct: 594 MLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q5BJQ0|ADCK3_RAT Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus
norvegicus GN=Adck3 PE=2 SV=1
Length = 649
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/467 (53%), Positives = 334/467 (71%), Gaps = 3/467 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG G +AEV +
Sbjct: 177 EDIEKARQA-KARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAK 235
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L +S+ S F++ ANAERIV+TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 236 KSLRSENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLA 295
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K FERVRQSADFMP Q+ K L +LGP W+ KL + +PFAAASIGQVH LK G E
Sbjct: 296 KIFERVRQSADFMPLKQMTKTLNNDLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGRE 355
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA
Sbjct: 356 VAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAY 415
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
+KF+EL++ +P+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ L
Sbjct: 416 AKKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVL 475
Query: 489 CLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDK 548
CLRELF+F MQTDPNWSNFFY+ ++ LLDFGATR Y + F D YIQVI+A AD D+
Sbjct: 476 CLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDR 535
Query: 549 DKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPT 608
+ VL S +M FLTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P
Sbjct: 536 EAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPI 594
Query: 609 ILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
+L HRL PPPEE YSLHRK+ G FL+CSKLK C M ++ Y NY
Sbjct: 595 MLKHRLIPPPEETYSLHRKMGGSFLICSKLKACFPCKAMFEEAYSNY 641
>sp|Q96D53|ADCK4_HUMAN Uncharacterized aarF domain-containing protein kinase 4 OS=Homo
sapiens GN=ADCK4 PE=1 SV=2
Length = 544
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/468 (52%), Positives = 343/468 (73%), Gaps = 5/468 (1%)
Query: 189 DEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
+ED+ RA A P+ +PQL+ +++RKVP+SR+ R+ +FG LA GLG+G +AE+ +
Sbjct: 56 EEDIRRAREA---RPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAK 112
Query: 249 RTLGFGDSSLSVGTTLDSA-FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPEL 307
+++ G G+ LDS+ F++ ANAERIV TLC VRGAALK+GQ+LSIQD++ ISP+L
Sbjct: 113 KSMPGGRLQSEGGSGLDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQL 172
Query: 308 QKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGT 367
Q FERVRQSADFMP+WQ+ +VL ELG DW++K++SL+ PFAAASIGQVH GLL+DGT
Sbjct: 173 QHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGT 232
Query: 368 EVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAE 427
EVA+KIQYPG+A+ I+SD+ NL+ V+K+ P G+F + ++ ++EL WE DY+REA
Sbjct: 233 EVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAA 292
Query: 428 CTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVME 487
C + F++L+ P++ VP V+ EL T ++L EL GVP+DQC L + R IC ++
Sbjct: 293 CAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLT 352
Query: 488 LCLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGD 547
LCLRELF+FR+MQTDPNW+NF Y+ + Q+ LLDFGA+R + EF D YI+V+KA ADGD
Sbjct: 353 LCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGD 412
Query: 548 KDKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVP 607
+D VL SR + FLTG+E+K +AHV VMIL E F+ + G +DFG +T +RI +L+P
Sbjct: 413 RDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQ-GPYDFGSGETARRIQDLIP 471
Query: 608 TILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
+L HRLCPPPEE Y+LHRKL+G FL C+ L+ +AC + +D Y Y
Sbjct: 472 VLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRY 519
>sp|Q6AY19|ADCK4_RAT Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus
norvegicus GN=Adck4 PE=2 SV=1
Length = 528
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/448 (54%), Positives = 333/448 (74%), Gaps = 5/448 (1%)
Query: 208 KPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
+PQL+ +++RKVP+SR+ R+ SFG LA GLG+G +AEVT+++L G S+ S
Sbjct: 73 RPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPGG----SLQHEGSSP 128
Query: 268 FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVE 327
F+ ANAERIV TLC VRGAALKIGQ+LSIQD+++ISP+LQ+ FERVRQSADFMP+WQ+
Sbjct: 129 FLTEANAERIVQTLCTVRGAALKIGQMLSIQDNSLISPQLQRVFERVRQSADFMPRWQMM 188
Query: 328 KVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDID 387
KVL ELG DW+ K++SL+ PFAAASIGQVH G+LKDGTEVA+KIQYPGVA+ I+SD+
Sbjct: 189 KVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQ 248
Query: 388 NLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTV 447
NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + FK+L+ P++ VP V
Sbjct: 249 NLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAV 308
Query: 448 IDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSN 507
++EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQTDPNW+N
Sbjct: 309 VEELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWAN 368
Query: 508 FFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESK 567
F Y+ + ++ LLDFGA+RA+ EF D YI+V+KA ADGD+D+VL S+ + FLTG+E+K
Sbjct: 369 FLYDASSHKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETK 428
Query: 568 IMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRK 627
+AHV VMIL E F+ G +DFG +T +RI L+P +L HRL PPPEE Y+LHRK
Sbjct: 429 AFSDAHVEAVMILGEPFAAS-GSYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRK 487
Query: 628 LSGVFLLCSKLKVKMACYPMLKDVYDNY 655
L+G FL C++L +AC + +D Y Y
Sbjct: 488 LAGAFLACARLHAHIACRDLFQDTYHRY 515
>sp|Q566J8|ADCK4_MOUSE Uncharacterized aarF domain-containing protein kinase 4 OS=Mus
musculus GN=Adck4 PE=2 SV=1
Length = 533
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 334/449 (74%), Gaps = 2/449 (0%)
Query: 208 KPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
+PQL+ +++RKVP+SR+ R+ SFG LA GLG+G +AEVT+++L G + L S+
Sbjct: 73 RPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPGGSLQHEGVSGLGSS 132
Query: 268 -FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQV 326
F++ ANAERIV TLC VRGAALKIGQ+LSIQD++ ISP+LQ+ FERVRQSADFMP+WQ+
Sbjct: 133 PFLSEANAERIVQTLCTVRGAALKIGQMLSIQDNSFISPQLQRIFERVRQSADFMPRWQM 192
Query: 327 EKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 386
+VL ELG DW+ K++SL+ PFAAASIGQVH GLLKDGTEVA+KIQYPGVA+ I+SD+
Sbjct: 193 MRVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVKIQYPGVAQSIQSDV 252
Query: 387 DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
+NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + F++L+ P++ VP
Sbjct: 253 ENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFRKLLADDPFFRVPA 312
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWS 506
V+ EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQTDPNW+
Sbjct: 313 VVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWA 372
Query: 507 NFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYES 566
NF Y+ + Q+ LLDFGA+RA+ EF D YI+V+KA ADGD+D+VL S+ + FLTG+E+
Sbjct: 373 NFLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFET 432
Query: 567 KIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHR 626
K +AHV VMIL E F+ G +DFG +T +RI L+P +L HRL PPPEE Y+LHR
Sbjct: 433 KAFSDAHVEAVMILGEPFAAS-GPYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHR 491
Query: 627 KLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
KL+G FL C++L +AC + +D Y Y
Sbjct: 492 KLAGAFLACARLHAHIACRDLFQDTYHRY 520
>sp|Q5RGU1|ADCK3_DANRE Chaperone activity of bc1 complex-like, mitochondrial OS=Danio
rerio GN=adck3 PE=2 SV=1
Length = 602
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/471 (52%), Positives = 328/471 (69%), Gaps = 20/471 (4%)
Query: 186 AVVDEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAE 245
+ ED+ +A A + K +K L+ A++RKVP +RLGR+ +FG LA GLG+G +AE
Sbjct: 141 GITAEDIEKAREAKQNGSKP-HKQMLSERARERKVPVTRLGRLANFGGLAVGLGIGALAE 199
Query: 246 VTRRTLGFGDSSLSVGTTLDSA-FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVIS 304
V +++L D + + LDS+ F++ ANAERIV TLCKVRGAALK+GQ+LSIQD I+
Sbjct: 200 VAKKSLRSEDKNGNKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFIN 259
Query: 305 PELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK 364
P+L K FERVRQSADFMP Q+ K L +LGP+W+ KL + +PFAAASIGQ
Sbjct: 260 PQLAKIFERVRQSADFMPIKQMTKALSNDLGPNWRDKLEMFEERPFAAASIGQ------- 312
Query: 365 DGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKR 424
YPGVA+ I SD++NL+ V+ + N PEG+F ++L++V ++EL E DY R
Sbjct: 313 ----------YPGVAQSINSDVNNLMTVLSMSNALPEGLFPEHLIDVMRRELALECDYIR 362
Query: 425 EAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKL 484
EA+C RKFKEL++ +P+++VP VI ELS+ +LTTEL+ G P+DQ L E + ICK
Sbjct: 363 EAKCARKFKELLKDHPFFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKN 422
Query: 485 VMELCLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGA 544
++ LCLRELF+FRYMQTDPNWSNFFY+ T ++ LLDFGATR + + F D YI++IKA A
Sbjct: 423 ILNLCLRELFEFRYMQTDPNWSNFFYDPQTHRVALLDFGATRGFDESFTDVYIEIIKAAA 482
Query: 545 DGDKDKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITE 604
DG+++ VL S M FLTGYESK M AHV+ VMIL E F+ + FDFG Q TT+RI
Sbjct: 483 DGNREGVLKQSIDMKFLTGYESKAMVNAHVDAVMILGEAFASE-EPFDFGAQSTTERIHN 541
Query: 605 LVPTILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 655
L+P +L RL PPPEE YSLHRK+ G FL+CS+L K++C M + Y NY
Sbjct: 542 LIPVMLKQRLIPPPEETYSLHRKMGGSFLICSRLNAKISCKDMFEAAYSNY 592
>sp|Q18486|COQ8_CAEEL Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans
GN=coq-8 PE=3 SV=2
Length = 755
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/447 (53%), Positives = 319/447 (71%), Gaps = 6/447 (1%)
Query: 215 AKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSAFINPANA 274
+ + VP++R+GR+ +FG LA GL G AEVTRRT G G G + F++ ANA
Sbjct: 301 SNESSVPATRIGRLATFGQLAFGLLGGATAEVTRRTFGIGKRLQEEGIP-KNPFLSEANA 359
Query: 275 ERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTEL 334
+RIV TLC+VRGAALK+GQ+LSIQDS+ + P L + FERVRQSADFMP QV + +
Sbjct: 360 DRIVATLCRVRGAALKLGQMLSIQDSSTVPPALLQIFERVRQSADFMPIKQVHRQMKDAF 419
Query: 335 GPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK 394
G DW+ K D KPFA ASIGQVH +LKDG VA+K+QYPGVA+GI+SDIDNL+ V+
Sbjct: 420 GDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLS 479
Query: 395 IWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTG 454
+ +FP+GMFLD V VA++EL E DY+REA +KF+EL+ + +VP VIDELS+
Sbjct: 480 VGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFRELIADWQDVYVPEVIDELSSS 539
Query: 455 QILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDT 514
++LTTEL+ G PVD CV+ R +I +ELCL+E+F +R+MQTDPNWSNFF K
Sbjct: 540 RVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFLWRFMQTDPNWSNFFLGKHP 599
Query: 515 K----QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME 570
K +L+LLDFGA+RAY K+F+D Y+ +IK+ DGDK K++ SR++GFLTGYE+ +ME
Sbjct: 600 KTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKIIEYSREIGFLTGYETSVME 659
Query: 571 EAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSG 630
+AHV +VMI+ E + ++F QD T RI +L+P +L HRL PPEEIYSLHRKLSG
Sbjct: 660 DAHVESVMIMGETLASN-HPYNFANQDVTMRIQKLIPVMLEHRLTSPPEEIYSLHRKLSG 718
Query: 631 VFLLCSKLKVKMACYPMLKDVYDNYKF 657
+LL +KLK ++C + ++++NY F
Sbjct: 719 CYLLAAKLKATVSCGGLFHEIHENYVF 745
>sp|P27697|COQ8_YEAST Probable serine/threonine-protein kinase COQ8, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ8 PE=1 SV=1
Length = 501
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/438 (42%), Positives = 278/438 (63%), Gaps = 7/438 (1%)
Query: 216 KQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSAFINPANAE 275
K VP+SR+ R+ +GSLAAG+G+ A+ G + + T S ++ +N +
Sbjct: 66 KSSSVPTSRISRLFHYGSLAAGVGMNAAAK------GISEVAKGNSPTWKSLILSDSNID 119
Query: 276 RIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELG 335
RI N K+RG ALKIGQ+LS QD V+ EL + RV+ SA+ MPQ Q+EKV+ ELG
Sbjct: 120 RITNKFSKMRGVALKIGQLLSFQDEKVLPKELYEILSRVQNSANHMPQRQLEKVMAKELG 179
Query: 336 PDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKI 395
+WK+K S D P AAASIGQVHA L G V +KIQYPGV + I+SD+++L+ ++
Sbjct: 180 ANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGVKESIDSDLNSLLMLLTA 239
Query: 396 WNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQ 455
++ P+G+FLD + A+ EL WE DY REA +KF+ L++ P + VP V E +T
Sbjct: 240 SSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKDDPAFEVPHVFPEYTTDN 299
Query: 456 ILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTK 515
I+T +EG + + E++ I + +M LCL E+ F+YMQTDPNW+NF YN TK
Sbjct: 300 IITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKYMQTDPNWANFLYNGRTK 359
Query: 516 QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIMEEAHVN 575
++ LLDFGA+R ++++F+ +Y +++ D+ +S ++G+LTG ES+ M++AHV+
Sbjct: 360 KIELLDFGASRPFAEDFILKYRKLLTYATLRDRKGAYEMSVQLGYLTGLESQSMKDAHVD 419
Query: 576 TVMILSEVFSEKIGE-FDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGVFLL 634
+V+ L E F + + FDF Q + RI + +LN RLCPPPEE YSLHRK SG+FLL
Sbjct: 420 SVLTLGEPFRGDVDKSFDFKDQTVSDRIRGNIGLMLNERLCPPPEETYSLHRKFSGIFLL 479
Query: 635 CSKLKVKMACYPMLKDVY 652
C+++ + C + K+++
Sbjct: 480 CARMGASVHCAKLFKEIF 497
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc1 PE=2 SV=1
Length = 610
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 275/441 (62%), Gaps = 14/441 (3%)
Query: 219 KVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFG--DSSLSVGTTLDSAFINPANAER 276
KVPSS+ R+ +G LA L VG I E +R G D +L +N N E
Sbjct: 178 KVPSSQWSRLWHYGGLATSLSVGAIGEKMKRMWGISKDDGAL---------LLNERNVEI 228
Query: 277 IVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGP 336
+VN L ++RGAALK+GQ+LS QDS +I P + + ERVR A MP+ Q+E+V+V LG
Sbjct: 229 LVNKLTQMRGAALKMGQMLSFQDSKLIDPRVSQILERVRDGAHSMPEKQLEQVMVKNLGK 288
Query: 337 DWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKI 395
+W + S D KP AAASIGQVH A L + EV +K+QYPGV I+SD++NL ++K
Sbjct: 289 NWMTHYSEFDRKPMAAASIGQVHRARLASNHMEVVVKVQYPGVMSSIDSDLNNLAYLLKA 348
Query: 396 WNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQ 455
+ P+G+FL+N + A+KEL WE DY+REA +F L++ + VP V E S
Sbjct: 349 SRILPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKNDSDFKVPMVFREASGPS 408
Query: 456 ILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTK 515
++T E + G+ + + +R HI L+ + CLRE+ ++ +MQTDPNWSNF YN TK
Sbjct: 409 VITLEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFMQTDPNWSNFLYNGKTK 467
Query: 516 QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIMEEAHVN 575
++ LLDFGA+ Y ++F+ +Y +++ A A +++K +S ++G+L +ES M +AH+N
Sbjct: 468 KIELLDFGASIEYDEKFIKKYCRLLLAAAHRNREKCKKLSVELGYLNNHESAQMIDAHIN 527
Query: 576 TVMILSEVFSEKIGE-FDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGVFLL 634
++ L+E F+ + +DFG Q T R+ + +P +L+ RL PPPEE YSLHR+LSG FLL
Sbjct: 528 SIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPVMLDLRLQPPPEETYSLHRRLSGHFLL 587
Query: 635 CSKLKVKMACYPMLKDVYDNY 655
C+KL K+ C + + +Y
Sbjct: 588 CAKLGAKVRCKELFSGMLKHY 608
>sp|Q54IH6|ABKA_DICDI Probable serine/threonine-protein kinase abkA OS=Dictyostelium
discoideum GN=abkA PE=3 SV=1
Length = 565
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/473 (42%), Positives = 293/473 (61%), Gaps = 28/473 (5%)
Query: 209 PQLNPV-AKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
P+LN + +K K+PSS+ R F LA G+G G + E T+RT+ SS S ++ +
Sbjct: 96 PELNYIKSKGHKIPSSQTSRFWEFTKLAVGVGAGFLGEKTKRTIDSSSSSSSPSSSYSAI 155
Query: 268 FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVE 327
F + NAER+ + ++RGAALKIGQ+LSIQD + + P+ + +RVR++A+ +P Q+
Sbjct: 156 FTD-TNAERMAESFSRMRGAALKIGQVLSIQDESFLPPKFVEILDRVRKNANPIPLEQLY 214
Query: 328 KVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDID 387
+ ELG +W+SK P AAASIGQVH + DG EVA+K+QYPGVA I SDI
Sbjct: 215 NTMSNELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIK 274
Query: 388 NLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVE---------P 438
NL ++K+ + PE +++ +E A+ EL E DY EA KFK L+E
Sbjct: 275 NLSSLLKM--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGTNGS 332
Query: 439 YPY---YFVPTVIDELSTGQILTTELIEGVPVDQCV--DLDYESRKHICKLVMELCLREL 493
+ Y +VP VI EL+T +ILTTE + G +D+ + + E+R I K ++ LCL EL
Sbjct: 333 FKYLKDLYVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLAEL 392
Query: 494 FQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLT 553
F+F +MQ DPNW+NF + + K++ LLDFGA R Y EF+ Y++ I+ G + D +++L
Sbjct: 393 FEFNFMQVDPNWTNFVVDFENKRINLLDFGACRNYKSEFLFNYLKSIEGGVNRDINQILE 452
Query: 554 ISRKMGFLTGYESKIMEEAHVNTVMILSEVFSE------KIGEFDFGGQDTTKRITELVP 607
S K+G+LTG E+K M +A +++ILSE FS+ + + F + KRI++L+P
Sbjct: 453 YSLKLGYLTGDENKQMNDAQAKSILILSEPFSKLYYKENNLKTYPFNEKQIAKRISQLIP 512
Query: 608 TILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMAC---YPMLKDV-YDNYK 656
T+L +RL PPPEE YSLHRKLSG +L+CSKLK + + K++ Y NYK
Sbjct: 513 TMLKNRLKPPPEETYSLHRKLSGCYLVCSKLKSNINSTLIFNHFKNIFYKNYK 565
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 27/307 (8%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ +A R+++ C RG +K+GQ L+ + ++ PE K + A P V +
Sbjct: 74 VHLRSAHRLLDLCCFNRGTFIKVGQHLAALEY-LVPPEYTKTLSVLHSQAPCTPFTDVVQ 132
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI-- 386
V+ +LG + + P AAS+ QVH +L+DG +VA+K+Q+P V DI
Sbjct: 133 VIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILI 192
Query: 387 -DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+ L+ V+K +FP+ F+ L+E AKK L E+D++ E K +V + + +P
Sbjct: 193 MEVLLHVVK--KIFPQFEFM-WLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIP 249
Query: 446 TVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHI---------CKLVMELCLRELFQF 496
+ ELST ++L E +EG V+ D +Y R I KL E+ +F
Sbjct: 250 RIYWELSTKRVLVMEYMEGGQVN---DREYMKRNQIDVNKVSHALGKLYSEM----IFVH 302
Query: 497 RYMQTDPNWSNFFYNKDTK----QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVL 552
++ DP+ N ++ + ++ILLD G + ++ F Y + +A DK+++
Sbjct: 303 GFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAADKERIR 362
Query: 553 TISRKMG 559
S+++G
Sbjct: 363 IYSQRLG 369
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 19/299 (6%)
Query: 273 NAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVT 332
+A R+++ C RG +K+GQ L + ++ PE K + A P V +V+
Sbjct: 78 SAHRLLDLCCANRGTFIKVGQHLGALE-YLVPPEYTKTLSVLHSQAPCTPFPDVVQVIRE 136
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI---DNL 389
+LG + + KP AAS+ QVH +L+DG +VA+K+Q+P V DI + L
Sbjct: 137 DLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILLMEVL 196
Query: 390 IGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 449
+ +K +FP+ F+ L+E AKK L E+D++ E K +V + + +P +
Sbjct: 197 LHAVK--KIFPQFEFM-WLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFSFLRIPRIYW 253
Query: 450 ELSTGQILTTELIEGVPVDQCVDLDYESRKHI-----CKLVMELCLRELFQFRYMQTDPN 504
ELST ++L E +EG V+ D +Y R I + + +L +F ++ DP+
Sbjct: 254 ELSTKRVLVMEYMEGGQVN---DREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPH 310
Query: 505 WSNFFYNKDTK----QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
N ++ + ++ILLD G + ++ F Y + +A D ++ S+++G
Sbjct: 311 PGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAADMQQIRIYSQRLG 369
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 33/349 (9%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKV 284
FG + G + T A +T R + +G L S ++ +AER+ C
Sbjct: 31 FGVVRVGRAIATTAVITYDYLTSLRNVPYGSEEYDF---LKSQ-VHLRSAERLRELCCAN 86
Query: 285 RGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSS 344
RG +K+GQ L D ++ E + + + A + ++E+V+ +LG + K S
Sbjct: 87 RGTFIKVGQHLGALDY-LLPEEYTRTLKVLHSQAPQSTRQEIEQVIREDLGKEIKELFVS 145
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI---DNLIGVMKIWNVFPE 401
+ P AAS+ QVH +L+DG VA+KIQ+P V DI + L+ V+K +FP+
Sbjct: 146 FEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVK--QIFPD 203
Query: 402 GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
F+ LVE AKK L E+D+ E K ++++ + + VP + ELST ++L E
Sbjct: 204 FEFM-WLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEFLKVPRIYWELSTRRVLLMEF 262
Query: 462 IEGVPVD-------QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK-- 512
+EG V+ +D++ E +++ KL E+ +F ++ DP+ N K
Sbjct: 263 MEGGQVNDKAYMEKNGIDVN-EISRNLGKLYSEM----IFVNGFVHCDPHPGNVLVKKCP 317
Query: 513 DTKQ--LILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
D+ + +ILLD G + S+ F Y ++ A D +V SR++G
Sbjct: 318 DSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKADMKRVQKYSRRLG 366
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 32/352 (9%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFG-DSSLSVGTTLDSAF--INPANAERIVNTL 281
FG++ G V T A ++ +++ +G + L + + F ++ +A R+
Sbjct: 34 FGAVRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELC 93
Query: 282 CKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSK 341
C RG +K+GQ L D ++ E + + A ++ +V+ +LG +
Sbjct: 94 CANRGTFIKVGQHLGALDY-LLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDL 152
Query: 342 LSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNL-IGVMKIWNVFP 400
S D P AS+ QVH +L DG VA+K+Q+P V DI + + V+ + +FP
Sbjct: 153 FQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFP 212
Query: 401 EGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTE 460
E F+ LV+ AKK L E+D+ E K +++ + + VP + +LST ++L E
Sbjct: 213 EFEFM-WLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLME 271
Query: 461 LIEGVPVDQCVDLDYESR---------KHICKLVMELCLRELFQFRYMQTDPNWSNFFYN 511
++G V+ D DY R +H+ K+ E+ +F ++ DP+ N
Sbjct: 272 FVDGGQVN---DRDYMERNKIDVNEISRHLGKMYSEM----IFVNGFVHCDPHPGNVLVR 324
Query: 512 KD----TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
K +++LLD G + ++EF Y + ++ D +V S+++G
Sbjct: 325 KHPGTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKRVKEYSQRLG 376
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 29/347 (8%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKV 284
FG++ G V T A ++ R++ +G S + ++ +A R+ C
Sbjct: 34 FGAVRVGRAVATTAVISYDYLTSLRSVPYG----SEEYLQRRSQVHLRSARRLFELCCAN 89
Query: 285 RGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSS 344
RG +K+GQ L D ++ E + + A +V +V+ +LG + S
Sbjct: 90 RGTFIKVGQHLGALDY-LLPEEYTSTLKVLHSQAPQSSMQEVRQVIREDLGKEIHDLFLS 148
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNL-IGVMKIWNVFPEGM 403
D P AAS+ QVH +L DG VA+K+Q+P V DI + + V+ + +FP+
Sbjct: 149 FDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPDFE 208
Query: 404 FLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIE 463
F+ LV+ AKK L E+D+ E K ++ + + VP + ELST ++L E +E
Sbjct: 209 FM-WLVDEAKKNLPLELDFLNEGRNAEKVAHMLRHFDFLKVPQIHWELSTKRVLLMEFVE 267
Query: 464 GVPVD-------QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK--DT 514
G V+ +D++ E H+ K+ E+ +F ++ DP+ N K DT
Sbjct: 268 GGQVNDRAYMEKNQIDVN-EISCHLGKMYSEM----IFVNGFVHCDPHPGNVLVRKRPDT 322
Query: 515 --KQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
+++LLD G + ++EF Y + ++ D D + S+++G
Sbjct: 323 GKAEIVLLDHGLYQVLTEEFRLDYCHLWQSLIWTDMDGLKQYSQRLG 369
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 11/288 (3%)
Query: 281 LCKVRGAA-LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWK 339
LC G +K GQ ++ ++++ + K ++ A + ++VE V + +LG
Sbjct: 254 LCLTNGGLYIKAGQYIA-SLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPN 312
Query: 340 SKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNV- 398
S D P AAAS+ QVH + K+G EVA+K+QY + + + DI ++ + N+
Sbjct: 313 HYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMA 372
Query: 399 FPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILT 458
FP+ F + + E K L E+D+ +EA+ + + + ++P V S+ +ILT
Sbjct: 373 FPDFEF-NWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNNNAYIPKVFRPYSSKRILT 431
Query: 459 TELIEGVPVD--QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK---- 512
TE I G ++ Q + S K + + ME+ ++F ++ DP+ N +
Sbjct: 432 TEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGNVLVRQHPNH 491
Query: 513 -DTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
+ Q++LLD G R Y +EF + + K + KV S+ +G
Sbjct: 492 PNQPQIVLLDHGLYREYDEEFRLNFCNLYKNLVLCNNKKVEKYSKALG 539
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 12/296 (4%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPE-LQKAFERVRQSADFMPQWQVEKVLVT 332
A+R+ T+ K G +K+GQI+++Q +N+ PE KAF+ + +A + +++ +
Sbjct: 110 AQRLFKTIYKNGGLYIKMGQIIAMQSNNL--PEAYGKAFQGMFDNAPQVEWEELQDIFKE 167
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 392
+ G + +S++ + A+ASI QVH +L G +VA+KIQ P VAK + D+ +
Sbjct: 168 QYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLVYKYM 227
Query: 393 MKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY----FVPTVI 448
M +++ + + L V+ + L EVD+ EA + +E VE Y ++P V
Sbjct: 228 MYVYDKWIFHIPLYFTVDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYIPKVY 287
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
E+S +++ TE +G+P+ L S+K I + ++F + + DP+
Sbjct: 288 KEISGKRVMVTEWADGIPLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCDPHPG 347
Query: 507 NFFYNKDTK---QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
N K+ Q ++LD G S++F ++ + A DK +L + G
Sbjct: 348 NILVRKNQAGLCQTVILDHGLYVFESEKFRKEFALLFTAAYSLDKKSILQVMDAWG 403
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+KIGQILS + + P + K +++ + +E + EL + D
Sbjct: 48 IKIGQILSTRPDLLPLPYI-KELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNL 408
P +ASI QVH +LKDG V +KIQ PG+A+ +++D+ + K+ N+ + F D L
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLS---IIKKLLNI-TKTKFTDAL 162
Query: 409 VE--VAKKEL----GWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
++ A EL E+D+ E +KFK+L E + P ID+L T +I+ E I
Sbjct: 163 IDPKEAIDELFISTTQELDFINEINNIKKFKKLNEDVKFVRTPYTIDKLCTEKIIVMEKI 222
Query: 463 EGVPVDQCVDL---DYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTKQLIL 519
G+ +D L Y+ + KL + +++FQ + DP+ N ++ +
Sbjct: 223 VGIKIDNLKKLLNEGYDLEELGKKLTLS-YFKQVFQDGFFHGDPHPGNLLIREN--HICY 279
Query: 520 LDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESK 567
+DFG SK I A A D +K++++ +G GY ++
Sbjct: 280 IDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVKKGYVNR 327
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 10/283 (3%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTE 333
A+ +V+ + +G +K+ QI++ D +++ E K+ + A F+ +VEK+ E
Sbjct: 245 AKAMVDLCYQNKGIFIKVAQIIASLD-HILPQEYIKSLSIFQDHAPFVTFEEVEKLFKIE 303
Query: 334 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLK----DGTEVAMKIQYPGVAKGIESDIDNL 389
G + P +AS+ QVH LK + EVA+K+QYPG+ + D+D+L
Sbjct: 304 TGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSL 363
Query: 390 IGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 449
V+ +F ++ A L E+D+ EA+ + K K+L +P V
Sbjct: 364 DNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQQLSIPKVYW 423
Query: 450 ELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSN 507
+T +ILT E I GV +D LD K + L ++ +++F ++ +DP+ N
Sbjct: 424 NHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHSDPHPGN 483
Query: 508 FFYNKDTK---QLILLDFGATRAYSKEFMDQYIQVIKAGADGD 547
K L+LLD G + + + + K+ GD
Sbjct: 484 LLVRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGD 526
>sp|Q5E8V3|UBIB_VIBF1 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1
Length = 544
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 14/331 (4%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q ++ +
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQ-MEM 111
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 391
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 392 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 507 NFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTG 563
N F N D Q I LD G +KE + + + D KV + G++
Sbjct: 292 NVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSGWVPA 351
Query: 564 YESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
+ +EE M+ +F++ +GE FG
Sbjct: 352 DTN--VEEFEFAIRMVCEPIFAKPLGEISFG 380
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 9/241 (3%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K+GQ LS + ++ P+ + ++ + P + + EL ++ SS+ +
Sbjct: 162 VKLGQGLSTR-PDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLETIFSSVSPE 220
Query: 349 PFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLD- 406
P AAAS+GQV+ L+ G VA+K+Q PG+ + I D + GV K+ N + + + D
Sbjct: 221 PIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVGKLINKYVDFITTDV 280
Query: 407 -NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGV 465
L++ + E++Y +EA+ R+FK+L VP + + ++ ++LT E +EG
Sbjct: 281 LTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWVEGT 340
Query: 466 PVDQCVDLDYESRKHICKLV---MELCLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDF 522
+++ + ++ + K + LV ++ LR+L ++ + DP+ N D K L LDF
Sbjct: 341 KLNEQLAIESQGLK-VLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGK-LAFLDF 398
Query: 523 G 523
G
Sbjct: 399 G 399
>sp|B5FF80|UBIB_VIBFM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain MJ11) GN=ubiB PE=3 SV=1
Length = 544
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 14/331 (4%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q ++ +
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQ-MEM 111
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 391
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 392 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 507 NFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTG 563
N F N D Q I LD G +KE + + + D KV + G++
Sbjct: 292 NVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSGWVPA 351
Query: 564 YESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
+ +EE M+ +F++ +GE FG
Sbjct: 352 DTN--VEEFEFAIRMVCEPIFAKPLGEISFG 380
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 23/320 (7%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + +++ P++ R++ P+ Q ++ +LG + D +
Sbjct: 71 IKFGQLLSTR-RDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQLFARFDSQ 129
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNL 408
P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + +I
Sbjct: 130 PLASASVAQVHAAQLKSGEEVVVKVVRPGLKPVIRQDLAWLFLLARIAERASADARRLRP 189
Query: 409 VEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGV 465
VEV +K + E+D REA + + E P +VP V +L Q+L E I GV
Sbjct: 190 VEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYWDLCRHQVLVMERIYGV 249
Query: 466 PV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDT---K 515
PV DQ D+ K + + +E+ ++F+ + D + N F + T
Sbjct: 250 PVTDLATLADQRTDM-----KLLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTRTPWSP 304
Query: 516 QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-EAHV 574
Q I +D G + + E D + + A D KV + G++ ++K+ E EA +
Sbjct: 305 QYIAIDCGIIGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPA-DTKVNEFEAAI 363
Query: 575 NTVMILSEVFSEKIGEFDFG 594
TV +F + + + FG
Sbjct: 364 RTVC--EPIFEKPLKDISFG 381
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 6/255 (2%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTE 333
A+ I L + +K+GQ+ S + S++ E + +++ Q ++ E
Sbjct: 85 AKWIRENLLSLGPTFIKVGQLFSTR-SDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEE 143
Query: 334 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVM 393
LG S D P AAAS+GQVH L G +V +K+Q PG+ K D+ L +
Sbjct: 144 LGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIA 203
Query: 394 KIWNVFPE---GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDE 450
+ + P+ G + + E K L E DY RE F+ + VP V
Sbjct: 204 QYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWR 263
Query: 451 LSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNF 508
++ QILT E + G+ + L+ RK + +L L +L + DP+ N
Sbjct: 264 YTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNL 323
Query: 509 FYNKDTKQLILLDFG 523
+ + +LI DFG
Sbjct: 324 AVSPEAGELIFYDFG 338
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ A A ++ L + +K+GQ LS + +++ P ++ P +
Sbjct: 99 VSRAKAIQLRELLTNLGPTYIKVGQALSTR-PDLVPPVFLDELTTLQDQLPSFPNEVAYR 157
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDN 388
+ ELG + + L +P AAAS+GQV+ G LK G VA+K+Q P + + I DI
Sbjct: 158 FIEEELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDI-Y 216
Query: 389 LIGVMKIWNVFPEGMFLDNLV----EVAKKELGWEVDYKREAECTRKFKELVEPYPYYFV 444
++ + +W +LV E+A + E++Y +EA KF +L P +V
Sbjct: 217 IMRSLSLWARRSVKRLRSDLVAITDELASRVFE-EMNYYQEAINGEKFAQLYGSLPEIYV 275
Query: 445 PTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTD 502
P++ + + ++LT E +EG+ + + + H+ ++ ++ LR+L + + D
Sbjct: 276 PSIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHAD 335
Query: 503 PNWSNFFYNKDTKQLILLDFG 523
P+ N D + L LDFG
Sbjct: 336 PHPGNLLAMADGR-LAYLDFG 355
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 21/303 (6%)
Query: 273 NAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVT 332
A+ +V L + +KIGQ LS + +++I E +AF +++ Q V+
Sbjct: 57 RAQWLVQQLLYLGPTFIKIGQSLSTR-ADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQ 115
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 392
EL ++ P A+AS+GQVH +L G V +K+Q PG+ + D + L
Sbjct: 116 ELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQT 175
Query: 393 MKIWNVFPEG---MFLDNLVEVAKKE----LGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+++ + G + +E +E L E+DY E + +F++ YP VP
Sbjct: 176 LRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVP 235
Query: 446 TVIDELSTGQILTTELIEGVPVDQ-------CVDLDYESRKHICKLVMELCLRELFQFRY 498
+ + +T +LT E + G+ VD ++LD + IC + +L + F
Sbjct: 236 EIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFF---- 291
Query: 499 MQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKM 558
Q+DP+ N + LI DFG DQ +Q A D ++VL M
Sbjct: 292 -QSDPHPGNMAVDSQGD-LIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYM 349
Query: 559 GFL 561
G +
Sbjct: 350 GLV 352
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 146/317 (46%), Gaps = 17/317 (5%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + +++ ++ ++ + + + ++++ + LG +S +++
Sbjct: 64 VKFGQLLSTR-PDLVPADIVLELNHLQDNVTPFSKGEFQRIVESSLGASVAEVFASFNIE 122
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NVFPEGMFLD 406
P A+AS+ QVH +LKDG EV +K+ PG+ K I DI L+ V + W N +G L
Sbjct: 123 PLASASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQDIALLLRVAR-WVENNTLDGKRLH 181
Query: 407 --NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEG 464
+VE + + E+D +REA + + P +VP V E + +L E I G
Sbjct: 182 PVEIVEDYRTTIFDELDLQREAANGSQLRRNFLNSPLLYVPEVYWEYTRTNVLVMERIYG 241
Query: 465 VPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD---TKQLIL 519
+PV L+ + K + + +E+ ++F+ + D + N F + Q I
Sbjct: 242 IPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFHADMHPGNIFVAHEHPSAPQYIA 301
Query: 520 LDFGATRAYSKEFMDQYI--QVIKAGADGDKDKVLTISRKMGFLTGYESKIMEEAHVNTV 577
+D + ++ DQY + + A D +V + + G++ + EA V TV
Sbjct: 302 VDMAIVGSLTRA--DQYYLARNLLAMFRRDYRQVAELHVESGWVPSHVRVEELEAAVRTV 359
Query: 578 MILSEVFSEKIGEFDFG 594
+F + + E F
Sbjct: 360 C--EPIFEKPLKEISFA 374
>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810,
chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1
SV=1
Length = 692
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVAKGIESD---IDN 388
ELG S + +P AAAS+GQV+ A L + G VA+K+Q PGV I D +
Sbjct: 178 ELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRY 237
Query: 389 LIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ G++K F L+ +V+ L E+DY EA+ KF++L VP +
Sbjct: 238 IAGLIKKAGRFNSD--LEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMY 295
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNF 508
E ST ++L E +EG +++ DL ++ ++ + +L ++ + DP+ NF
Sbjct: 296 TEYSTSKVLVMEWVEGQKLNEVNDL------YLVEVGVYCSFNQLLEYGFYHADPHPGNF 349
Query: 509 FYNKDTKQLILLDFGATRAYSKEFMDQYIQ 538
D QL LDFG + E D +++
Sbjct: 350 LRTYD-GQLAYLDFGMMGDFRPELRDGFME 378
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 25/337 (7%)
Query: 273 NAERIVNTLCKVRGAALKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKV 329
ER+ L ++ +K GQILS + + ++ EL++ ++V A M +E+
Sbjct: 51 RGERLRRALEELGPIFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEES 110
Query: 330 L---VTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 386
L V+EL D+++ P A+ASI QVHA LK+G EV +K+ PG+ K I DI
Sbjct: 111 LKSPVSELFADFQTY-------PMASASIAQVHAATLKNGKEVVVKVIRPGIEKTIRLDI 163
Query: 387 DNLIGVMK-IWNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYY 442
++ V + + N + +G L + VEV K + E+D +REA T + K
Sbjct: 164 ALMLLVARLVENYWEDGKRL-HPVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELI 222
Query: 443 FVPTVIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQ 500
++P V E++ ++L E I GVP+ L + K + + +E+ ++F+ +
Sbjct: 223 YIPEVYWEMTHSRVLVMERIYGVPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDSFFH 282
Query: 501 TDPNWSNFFY---NKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRK 557
D + N F N + I +D G + E + + A D +V +
Sbjct: 283 ADMHPGNIFVDVSNPANPRYIAIDCGIVGTLTPEDQSYLARNLLAFFRRDYRQVAVLHIS 342
Query: 558 MGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
G++ G+ EA + TV +F + + FG
Sbjct: 343 SGWVPGHTRVNEFEAAIRTV--CEPIFERPLKDISFG 377
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 30/315 (9%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ +A+++ K G +K+GQ + + V ++ E + QV +
Sbjct: 84 VHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCE 143
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDN 388
V E+G + D P A+AS+ QVH DG +VA+K+Q+ + +
Sbjct: 144 VFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQHAHMTD-TAAADTA 202
Query: 389 LIGVM-----KIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPY--PY 441
+GV+ +I+ F LD + E KEL + V+ K +C F++L P+ Y
Sbjct: 203 AVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKL-SPHIAEY 261
Query: 442 YFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRK------HICKLVMELCLRELFQ 495
+ PT+ LST ++LT E ++G V+ D+D + RK + KLV + +F+
Sbjct: 262 VYAPTIYWNLSTSKLLTMEFMDGAQVN---DVD-KIRKLGIQPYEVSKLVSQTFAEMMFK 317
Query: 496 FRYMQTDPNWSNF-----------FYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGA 544
++ DP+ +N Y K QL++LD G + Y + KA
Sbjct: 318 HGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFNTRFNYASLWKALV 377
Query: 545 DGDKDKVLTISRKMG 559
D + S K+G
Sbjct: 378 FSDAKAIKEHSEKLG 392
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 116/262 (44%), Gaps = 21/262 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLV-TELGPDWKSKLSS 344
+K GQILS + V I EL +RV + Q ++++ T LG +S +
Sbjct: 67 VKFGQILSTRRDLVPQDIGDELVMLQDRVEPF-----EGQTARIIIETALGKSVESAFAH 121
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGM 403
D P A+ASI QVHA L DG EV +K+ P + I DI L + + + P
Sbjct: 122 FDTVPLASASISQVHAATLHDGREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNAD 181
Query: 404 FLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
+ VA+ E L E+D +RE + E +VP VI + Q+LT E
Sbjct: 182 KIRPCEIVAEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAEQVLTLER 241
Query: 462 IEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD-----T 514
+ G+P D LD RK + + + ++F+ + D + N + + D
Sbjct: 242 MYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN 301
Query: 515 KQLILLDFGATRAYSKEFMDQY 536
+ I LDFG S++ DQY
Sbjct: 302 PRFIALDFGIMGQLSQK--DQY 321
>sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0889 PE=3 SV=1
Length = 408
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 143/338 (42%), Gaps = 28/338 (8%)
Query: 275 ERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTEL 334
E + L ++ +K+GQ+LS + +++ P A ++ + +P +E +L E
Sbjct: 44 EVLTKILVELGPFYIKLGQLLSTR-PDLLPPRYINALTALQSNVPPLPWSAIEDLLQREF 102
Query: 335 GPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES------DIDN 388
++ +P AA SIGQ+H +L+ G VA+K++ PG+ +E D+
Sbjct: 103 PQPLGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAE 162
Query: 389 LIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY-----F 443
L+ + + + D + K EL ++ EA T + + ++
Sbjct: 163 LLALTEFGQNYDIVKLADEFTQTVKAEL----NFDTEAAYTNNLRTNLAKTTWFDPNQLV 218
Query: 444 VPTVIDELSTGQILTTELIEGVPVDQCVDLDY--------ESRKHICKLVMELCLRELFQ 495
+P V EL+ + L E ++GVP+ DL E +K I L+ ++L+
Sbjct: 219 IPKVYWELTNQKFLVLEWLDGVPI-LTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYV 277
Query: 496 FRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTIS 555
+ DP+ N FY D + L L+D G +++ A D D + ++
Sbjct: 278 DGFFHADPHPGNIFYLADGR-LALIDCGMVGRLDPRTRQLLTEMLLAIVDLDAKRCAQLT 336
Query: 556 RKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDF 593
++ G + + V+ +L + + + EF+F
Sbjct: 337 VELSESVGRVN--FQRLEVDYERMLRKYYDLSLSEFNF 372
>sp|B6EHA6|UBIB_ALISL Probable ubiquinone biosynthesis protein UbiB OS=Aliivibrio
salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1
Length = 543
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 18/333 (5%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q +++ ++
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQMELS 112
Query: 333 ELGP--DWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNL 389
GP +W + D+ P A+ASI QVH LK+ G E+ +K+ P + IE+DI +
Sbjct: 113 LGGPLENW---FTDFDIVPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIEADIRLM 169
Query: 390 IGVMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
+ + PE L ++E +K L E+D +REA + + E +VP
Sbjct: 170 YRMATLVEKHIPEARRLKPVEVIEEYEKTLIDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPN 504
VI ++S+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 230 VILDVSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 505 WSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFL 561
N F N D Q I LD G +KE + + + D KV + G++
Sbjct: 290 PGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYRKVAQLHIDSGWV 349
Query: 562 TGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
E+ + EE ++ +F++ +GE FG
Sbjct: 350 PA-ETNV-EEFEFAIRIVCEPIFAKPLGEISFG 380
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 146/326 (44%), Gaps = 34/326 (10%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQ---VEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + +++ PE ++ D +P + +V+ LG +
Sbjct: 64 VKFGQVLSTR-RDLLPPEYADELALLQ---DRVPPFDGDIARQVVERSLGRKVEELFVDF 119
Query: 346 DLKPFAAASIGQVHAGLLKD-----GTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NV 398
DLKP A+AS+ QVH L+ G EVA+K+ PG+ IE D+ +L+ + W +
Sbjct: 120 DLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDL-SLMRTLAGWVEKL 178
Query: 399 FPEGMFLDNLVEVAK--KELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQI 456
F +G L VA+ K L E+D EA + + + VP V + S+ ++
Sbjct: 179 FADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREV 238
Query: 457 LTTELIEGVPVDQC-------VDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
LT E + G+PV Q VDL + + + +E+ ++F+ + D + N F
Sbjct: 239 LTLEWMHGIPVGQIERLREAGVDL-----QKLSRFGVEIFFTQVFRHGFFHADMHPGNIF 293
Query: 510 YNKDTKQLILLDFGATRAYSKEFMDQYIQV-IKAGADGDKDKVLTISRKMGFLTGYESKI 568
D + I LDFG + + + Y+ V A + D +V T + G++
Sbjct: 294 VAADGR-YIALDFGIVGSLT-DTDKHYLAVNFLAFFNRDYHRVATAHIESGWVPRDTRAE 351
Query: 569 MEEAHVNTVMILSEVFSEKIGEFDFG 594
EA V TV +F + + E FG
Sbjct: 352 ELEAAVRTVC--EPIFEKPLSEISFG 375
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 144/323 (44%), Gaps = 29/323 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL +RV F Q Q K++ +LG S
Sbjct: 71 IKFGQILSTRRDLLPEDIADELMLLQDRV---PPFDSQ-QSMKLIEEQLGKKISEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D+ P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + + F L
Sbjct: 127 DVDPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQDLAWLFILARAAERFSADARL 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ V+V +K + E+D REA + K E P +VP V + ++L E I
Sbjct: 187 LHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF---YNK 512
GV V DQ D+ K + + +E+ ++F+ + D + N F N
Sbjct: 247 YGVQVTDLATLADQRTDM-----KMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVNP 301
Query: 513 DTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-E 571
+ Q I +D G + + E D + + A D +V + G++ E+K+ E E
Sbjct: 302 WSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPA-ETKLNEFE 360
Query: 572 AHVNTVMILSEVFSEKIGEFDFG 594
A + TV +F + + + FG
Sbjct: 361 AAIRTVC--EPIFEKPLKDISFG 381
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + ++I ++ +++ P +V LG + +S D
Sbjct: 65 VKFGQVLSTR-RDLIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLGRPIEEVFASFDAD 123
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NVFPEGMFLD 406
P A+ASI QVH G+L DG EVA+K+ P V IE+D+ L+ V W + P+G L
Sbjct: 124 PVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADL-ALLRVAAAWLERLSPDGRRLR 182
Query: 407 NLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEG 464
VA+ + L E+D REA + + + +P +I +LS+ ++L E + G
Sbjct: 183 PREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLSSAEVLVMERMHG 242
Query: 465 VPVDQC 470
VP+ Q
Sbjct: 243 VPISQI 248
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL + +RV F Q V K++ +LG S
Sbjct: 71 IKFGQILSTRRDLLPEDIADELMRLQDRV---PPFDSQLSV-KLIEEQLGKKISEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + + L
Sbjct: 127 DVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAEKVSADARL 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ V+V +K + E+D REA + K E P +VP V + ++L E I
Sbjct: 187 LHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF---YNK 512
G+ V DQ D+ K + + +E+ ++F+ + D + N F N
Sbjct: 247 YGIQVTDLATLADQRTDM-----KMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVNP 301
Query: 513 DTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-E 571
+ Q I +D G + + E D + + A D +V + G++ E+K+ E E
Sbjct: 302 WSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPA-ETKLNEFE 360
Query: 572 AHVNTVMILSEVFSEKIGEFDFG 594
A + TV +F + + + FG
Sbjct: 361 AAIRTVC--EPIFEKPLKDISFG 381
>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390,
chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1
SV=1
Length = 682
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 18/303 (5%)
Query: 271 PANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVL 330
P A ++ N LC + + +K GQ+L+ ++I + ++ P ++
Sbjct: 164 PFRARQLRNLLCNLGPSFIKAGQVLA-NRPDIIREDYMNELCILQDDVPPFPNEVAFNII 222
Query: 331 VTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDI--- 386
ELG ++ S + + AAAS+GQV+ L+ G +VA+K+Q P + I D+
Sbjct: 223 EEELGQPLENIFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLF 282
Query: 387 DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
L + +++ G + +V+ ++L E+DY EA F E + P +P
Sbjct: 283 RTLASFLNGFSLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPG 342
Query: 447 VIDELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYM 499
V L ++L E I+G+ D +DL+ + + LR+L +F
Sbjct: 343 VYKNLCGPRVLVMEWIDGIRCTDPQAIKDAGIDLN-----GFLTVGVSAALRQLLEFGLF 397
Query: 500 QTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
DP+ N F +D + + +DFG S++ I + + D ++ ++G
Sbjct: 398 HGDPHPGNIFAMQDGR-IAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLG 456
Query: 560 FLT 562
FL
Sbjct: 457 FLA 459
>sp|C1DHS4|UBIB_AZOVD Probable ubiquinone biosynthesis protein UbiB OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1
Length = 537
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 29/323 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL +RV F PQ Q ++ +LG +
Sbjct: 72 IKFGQILSTRRDLLPEDIADELTWLQDRV---PPFNPQ-QSVALIEEQLGARVDEAFARF 127
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKI---WNVFPEG 402
D +P A+AS+ QVHA LK G EV +K+ PG+ I D+ L ++ +
Sbjct: 128 DSEPLASASVAQVHAAQLKTGEEVVVKVVRPGLKAVIRQDLAWLYLFARLAERASTEARR 187
Query: 403 MFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ L ++V +K + E+D REA + K E P +VP + + ++L E I
Sbjct: 188 LHLVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWDWCRPKVLVMERI 247
Query: 463 EGVP-------VDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDT- 514
GVP VDQ DL K + + +E+ ++F+ + D + N F +
Sbjct: 248 YGVPVTDLAALVDQGTDL-----KLLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTRQP 302
Query: 515 --KQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-E 571
Q I +D G + + + D + + A D KV + G++ ++++ E E
Sbjct: 303 WDPQYIAIDCGIVGSLTPQDQDYLARNLLAFFKRDYRKVAQLHIDSGWVPA-DTQVNEFE 361
Query: 572 AHVNTVMILSEVFSEKIGEFDFG 594
A + TV +F + + + FG
Sbjct: 362 AAIRTVC--EPIFEKPLKDISFG 382
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 14/333 (4%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPHIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
V +I PE L VEV + K L E+D +REA + + E +VP
Sbjct: 171 RVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPE 229
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPN 504
V+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 230 VLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 505 WSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFL 561
N F N + Q I LD G + E + A + D +V + G++
Sbjct: 290 PGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWV 349
Query: 562 TGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
++ + +E V M+ +F++ + E FG
Sbjct: 350 P-LDTNV-DEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|Q9KVQ4|UBIB_VIBCH Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=ubiB PE=3 SV=1
Length = 544
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 14/333 (4%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPHIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
V +I PE L VEV + K L E+D +REA + + E +VP
Sbjct: 171 RVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPE 229
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPN 504
V+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 230 VLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 505 WSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFL 561
N F N + Q I LD G + E + A + D +V + G++
Sbjct: 290 PGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWV 349
Query: 562 TGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
++ + +E V M+ +F++ + E FG
Sbjct: 350 P-LDTNV-DEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 21/262 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLV-TELGPDWKSKLSS 344
+K GQILS + V I EL +RV + Q ++++ T LG +S +
Sbjct: 67 VKFGQILSTRRDLVPQDIGDELVMLQDRVEPF-----EGQTARIIIETALGKSVESAFAH 121
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGM 403
D P A+ASI QVHA L D EV +K+ P + I DI L + + + P
Sbjct: 122 FDTVPLASASISQVHAATLHDRREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNAD 181
Query: 404 FLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
+ VA+ E L E+D +RE + E +VP VI + ++LT E
Sbjct: 182 KIRPREIVAEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLER 241
Query: 462 IEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD-----T 514
+ G+P D LD RK + + + ++F+ + D + N + + D
Sbjct: 242 MYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSN 301
Query: 515 KQLILLDFGATRAYSKEFMDQY 536
+ I LDFG S++ DQY
Sbjct: 302 PRFIALDFGIMGQLSQK--DQY 321
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + + I+ EL +RV F P+ Q ++ ++LG S
Sbjct: 71 IKFGQLLSTRRDLLPTDIADELMLLQDRV---PPFDPK-QAVALIESQLGAKVGEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + K
Sbjct: 127 DVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLIAKGAERASADARR 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VE+ +K + E+D REA + + E +VP V +L ++L E I
Sbjct: 187 LHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD-- 513
GVPV DQ D+ K + + +E+ ++F+ + D + N F +
Sbjct: 247 YGVPVTDMATLADQRTDM-----KLLAERGVEVFFTQVFRHSFFHADMHPGNIFVSTVKP 301
Query: 514 -TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-E 571
+ Q I +D G + + E D + + A D +V + G++ + +K+ E E
Sbjct: 302 WSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAELHIDSGWVPAH-TKVNEFE 360
Query: 572 AHVNTVMILSEVFSEKIGEFDFG 594
A + TV +F + + + FG
Sbjct: 361 AAIRTVC--EPIFEKPLKDISFG 381
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 152/336 (45%), Gaps = 21/336 (6%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
+ +R+ L ++ +K GQILS + +++ ++ ++ ++++ P Q ++
Sbjct: 50 SRGDRLRLALEELGPVFVKFGQILSTR-RDLLPDDMAESLKQLQDRVPPFPSEQARGIIE 108
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIG 391
LG + P A+AS+ QVHA L +G +V +K+ PG+ K I D+ L+
Sbjct: 109 KSLGAPVSELFAEFSPDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDL-GLMY 167
Query: 392 VM-----KIWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFV 444
+M K W+ EG L + VA + + E+D +REA + + E P ++
Sbjct: 168 LMAGLLEKYWS---EGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYI 224
Query: 445 PTVIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTD 502
P + + + +L E I G+P+ L+ + + + + +E+ ++F+ + D
Sbjct: 225 PFIDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHAD 284
Query: 503 PNWSNFFY---NKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 559
+ N F N + I +DFG + + + + A D +V + + G
Sbjct: 285 MHPGNIFVDVSNPADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQLHIQSG 344
Query: 560 FLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 594
++ E+++ E EA + TV +F + + FG
Sbjct: 345 WVPP-ETRVNEFEAAIRTVC--EPIFERPLKDISFG 377
>sp|B0KM38|UBIB_PSEPG Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain GB-1) GN=ubiB PE=3 SV=1
Length = 540
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + + I+ EL +RV F PQ + ++ +LG S
Sbjct: 72 IKFGQLLSTRRDLLPTDIADELMLLQDRV---PPFDPQ-KAVALIEEQLGAKVGEVFSRF 127
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + K
Sbjct: 128 DVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAERASADARR 187
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VE+ +K + E+D REA + + E +VP V +L ++L E I
Sbjct: 188 LHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERI 247
Query: 463 EGVPVDQCVDL--DYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD---TKQL 517
GVPV V L K + + +E+ ++F+ + D + N F + + Q
Sbjct: 248 YGVPVTDMVTLADQRTDMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSTVKPWSPQY 307
Query: 518 ILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-EAHVNT 576
I +D G + + E D + + A D +V + G++ + +K+ E EA + T
Sbjct: 308 IAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPAH-TKVNEFEAAIRT 366
Query: 577 VMILSEVFSEKIGEFDFG 594
V +F + + + FG
Sbjct: 367 VC--EPIFEKPLKDISFG 382
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 29/323 (8%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + + I+ EL +RV F PQ V ++ +LG S
Sbjct: 72 IKFGQLLSTRRDLLPTDIADELMLLQDRV---PPFDPQHAV-ALIEEQLGAKVGEVFSRF 127
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + K
Sbjct: 128 DVEPLASASVAQVHAARLKSGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAERASADARR 187
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VE+ +K + E+D REA + + E +VP V +L ++L E I
Sbjct: 188 LHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERI 247
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK--- 512
GVPV DQ D+ K + + +E+ ++F+ + D + N F +
Sbjct: 248 YGVPVTDMATLADQRTDM-----KMLAERGVEVFFTQVFRDSFFHADMHPGNIFVSTVKP 302
Query: 513 DTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIME-E 571
+ Q I +D G + + E D + + A D +V + G++ ++K+ E E
Sbjct: 303 WSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPA-QTKVNEFE 361
Query: 572 AHVNTVMILSEVFSEKIGEFDFG 594
A + TV +F + + + FG
Sbjct: 362 AAIRTVC--EPIFEKPLKDISFG 382
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 14/333 (4%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPYIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
V +I PE L VEV + K L E+D +REA + + E +VP
Sbjct: 171 RVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPE 229
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPN 504
V+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 230 VLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 505 WSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFL 561
N F N + Q I LD G + E + A + D +V + G++
Sbjct: 290 PGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWV 349
Query: 562 TGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 594
++ + +E V M+ +F++ + E FG
Sbjct: 350 P-LDTNV-DEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 19/261 (7%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + V I EL +RV F Q ++ T LG +S +
Sbjct: 67 VKFGQILSTRRDLVPQDIGDELVMLQDRVE---PFEGQ-TARSIIETALGKSVESAFAHF 122
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGMF 404
D P A+ASI QVHA L D V +K+ P + I DI L + + + P
Sbjct: 123 DTVPLASASISQVHAATLHDRRAVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADK 182
Query: 405 LDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VA+ E L E+D +RE + E +VP VI + ++LT E +
Sbjct: 183 IRPREIVAEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLERM 242
Query: 463 EGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD-----TK 515
G+P D LD RK + + + ++F+ + D + N + + D
Sbjct: 243 YGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNP 302
Query: 516 QLILLDFGATRAYSKEFMDQY 536
+ I+LDFG S++ DQY
Sbjct: 303 RFIVLDFGIMGQLSQK--DQY 321
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,660,804
Number of Sequences: 539616
Number of extensions: 10053339
Number of successful extensions: 33473
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 33128
Number of HSP's gapped (non-prelim): 278
length of query: 660
length of database: 191,569,459
effective HSP length: 124
effective length of query: 536
effective length of database: 124,657,075
effective search space: 66816192200
effective search space used: 66816192200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)