Query psy6126
Match_columns 214
No_of_seqs 166 out of 1612
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 18:18:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 2.4E-30 8.2E-35 211.5 9.4 178 2-179 55-242 (510)
2 3vw7_A Proteinase-activated re 100.0 1.3E-29 4.6E-34 205.4 10.4 177 2-179 43-225 (484)
3 3uon_A Human M2 muscarinic ace 100.0 8.2E-30 2.8E-34 205.7 8.2 178 2-180 46-224 (467)
4 3rze_A Histamine H1 receptor, 100.0 3.3E-29 1.1E-33 201.4 8.6 176 2-180 31-209 (452)
5 2rh1_A Beta-2-adrenergic recep 100.0 6.8E-29 2.3E-33 202.5 9.4 173 2-175 63-239 (500)
6 4dkl_A MU-type opioid receptor 100.0 2.1E-29 7.2E-34 203.1 3.8 176 2-180 40-219 (464)
7 3v2y_A Sphingosine 1-phosphate 100.0 6.7E-28 2.3E-32 197.5 12.7 165 2-173 86-250 (520)
8 2z73_A Rhodopsin; visual pigme 99.9 1.6E-27 5.4E-32 191.8 12.5 177 2-179 57-237 (448)
9 3sn6_R Lysozyme, beta-2 adrene 99.9 1E-28 3.6E-33 202.0 5.3 178 2-180 205-386 (514)
10 1u19_A Rhodopsin; G protein-co 99.9 6.1E-29 2.1E-33 193.5 3.7 171 2-174 61-236 (349)
11 3odu_A C-X-C chemokine recepto 99.9 3.4E-28 1.2E-32 198.0 8.0 176 2-181 71-248 (502)
12 3pbl_A D(3) dopamine receptor, 99.9 5.4E-28 1.9E-32 195.8 9.2 171 2-180 61-235 (481)
13 4amj_A Beta-1 adrenergic recep 99.9 9.1E-30 3.1E-34 195.4 -1.4 175 2-177 34-212 (315)
14 2ks9_A Substance-P receptor; w 99.9 5.4E-28 1.9E-32 189.4 6.9 168 2-173 55-227 (364)
15 3eml_A Human adenosine A2A rec 99.9 1E-27 3.5E-32 194.4 7.5 176 2-180 44-230 (488)
16 4ea3_A Fusion protein of nocic 99.9 2.7E-27 9.4E-32 189.8 8.4 170 2-174 148-321 (434)
17 2lnl_A C-X-C chemokine recepto 99.9 2.6E-26 8.9E-31 175.2 10.5 170 2-175 34-207 (296)
18 4eiy_A Adenosine receptor A2A/ 99.9 2.3E-27 8E-32 190.4 1.3 174 2-178 54-238 (447)
19 1hll_A Alpha-2A adrenergic rec 98.9 1.6E-10 5.6E-15 57.2 0.2 31 65-95 2-32 (32)
20 2rdd_B UPF0092 membrane protei 69.1 8.4 0.00029 18.7 3.8 17 159-175 14-30 (37)
21 3arc_M Photosystem II reaction 45.7 26 0.00089 16.9 3.9 21 144-164 8-28 (36)
22 2jx4_A Vasopressin V2 receptor 21.1 73 0.0025 16.6 2.2 14 162-175 2-15 (52)
23 2l6w_A Beta-type platelet-deri 20.7 31 0.0011 16.9 0.0 21 153-173 15-35 (39)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.96 E-value=2.4e-30 Score=211.52 Aligned_cols=178 Identities=17% Similarity=0.258 Sum_probs=141.0
Q ss_pred cceeccCCC---CCchhhHHHHHHHHHHHHHHhhhhhhhhhhh--cccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy6126 2 SPFRRPSTV---RNATAVFIINLSVSDLMFCCFNLPLAASTFW--QRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITIN 76 (214)
Q Consensus 2 ~~v~~~~~~---~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~--~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~d 76 (214)
+++.++|++ ++++|+|++|||++|++++++.+|+.+...+ .+.|.+|+..|++..++...+..+|++++++||+|
T Consensus 55 ~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~d 134 (510)
T 4grv_A 55 FTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVA 134 (510)
T ss_dssp HHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544 4788999999999999999999999887654 35699999999999999999999999999999999
Q ss_pred hheeeeccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccc----cCccceeeecCCCC-CCchhHHHHHHHH
Q psy6126 77 RYVMIGHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGL----EPSIGSCSILPDDY-GHSPKEFLFLVAF 151 (214)
Q Consensus 77 Ry~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~----~~~~~~C~~~~~~~-~~~~~~~~~~~~~ 151 (214)
||+||++|++|++..|++++..+++++|++++++++|+++........ ......|....+.. ...+..+.+++.+
T Consensus 135 Ry~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f 214 (510)
T 4grv_A 135 RYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSF 214 (510)
T ss_dssp HHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCHHHHHHHHHHHHHHHT
T ss_pred heEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCccccccccccchhhhhhhhhhhHHH
Confidence 999999999999999999999999999999999999988753222111 11223565443321 1233445567789
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy6126 152 VIPCISIVVCYARIFYIVRKTAMKSRAM 179 (214)
Q Consensus 152 ~~p~~~~~~~y~~i~~~l~~~~~~~~~~ 179 (214)
++|+++|+++|++|++.++++.+.....
T Consensus 215 ~iP~~ii~~~Y~~I~~~l~~~~~~~~~~ 242 (510)
T 4grv_A 215 LFPMLVISILNTVIANKLTVMVNIFEML 242 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999999999876654443
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=205.40 Aligned_cols=177 Identities=20% Similarity=0.316 Sum_probs=138.7
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhh-hcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhhee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTF-WQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVM 80 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~-~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 80 (214)
+++.+++++|+++|+|++|||++|+++++. +|+..... ..+.|.+++..|++..++..++..+|++++++||+|||+|
T Consensus 43 ~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~a 121 (484)
T 3vw7_A 43 VVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLA 121 (484)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheE
Confidence 456788899999999999999999999855 55555444 4458999999999999999999999999999999999999
Q ss_pred eeccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCC-Cc----hhHHHHHHHHHHHH
Q psy6126 81 IGHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYG-HS----PKEFLFLVAFVIPC 155 (214)
Q Consensus 81 I~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~-~~----~~~~~~~~~~~~p~ 155 (214)
|++|++|++.++++++..+++++|++++++++|+++........+.....|........ .. +.....++.+++|+
T Consensus 122 I~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 201 (484)
T 3vw7_A 122 VVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPL 201 (484)
T ss_dssp HHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999988763333233344457865433221 11 33344577899999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh
Q psy6126 156 ISIVVCYARIFYIVRKTAMKSRAM 179 (214)
Q Consensus 156 ~~~~~~y~~i~~~l~~~~~~~~~~ 179 (214)
++++++|++|++.++++.++.+..
T Consensus 202 ~ii~~~Y~~I~~~l~~~~~~~~~~ 225 (484)
T 3vw7_A 202 IISTVCYVSIIRCLSSSANIFEML 225 (484)
T ss_dssp HHHHHHHHHHHHHTTSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhHhhHHHHhh
Confidence 999999999999999987655543
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.96 E-value=8.2e-30 Score=205.71 Aligned_cols=178 Identities=21% Similarity=0.325 Sum_probs=150.0
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|.+++..|++..++..++..+|++++++||+|||++|
T Consensus 46 ~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai 125 (467)
T 3uon_A 46 VSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCV 125 (467)
T ss_dssp HHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667888999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhcccccc-ccCccceeeecCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFG-LEPSIGSCSILPDDYGHSPKEFLFLVAFVIPCISIVV 160 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 160 (214)
++|++|++..+++++..+++++|++++++++|+++....... .......|..... ....+..+..++.+++|++++++
T Consensus 126 ~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~~~~~~~~~~~p~~ii~~ 204 (467)
T 3uon_A 126 TKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFF-SNAAVTFGTAIAAFYLPVIIMTV 204 (467)
T ss_dssp HCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGG-GSHHHHHHHHHHHTHHHHHHHHH
T ss_pred hcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecC-cchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998765222111 2233346765433 22345556677889999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhh
Q psy6126 161 CYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 161 ~y~~i~~~l~~~~~~~~~~~ 180 (214)
+|++|++.++++.++.+...
T Consensus 205 ~y~~I~~~l~~~~~~~~~~~ 224 (467)
T 3uon_A 205 LYWHISRASKSRINIFEMLR 224 (467)
T ss_dssp HHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHhh
Confidence 99999999999877665543
No 4
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=201.40 Aligned_cols=176 Identities=20% Similarity=0.378 Sum_probs=146.5
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|..++..|++..++..++..+|++++++||+|||++|
T Consensus 31 ~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 110 (452)
T 3rze_A 31 YAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSV 110 (452)
T ss_dssp HHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 45678889999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhcccccccc---CccceeeecCCCCCCchhHHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLE---PSIGSCSILPDDYGHSPKEFLFLVAFVIPCISI 158 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~p~~~~ 158 (214)
++|++|++..+++++..+++++|+++++.++|.+. +..+..+ .....|..... ....+..+..++.+++|++++
T Consensus 111 ~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~--~~~~~~~~~~~~~~~C~~~~~-~~~~~~~~~~~~~~~~p~~ii 187 (452)
T 3rze_A 111 QQPLRYLKYRTKTRASATILGAWFLSFLWVIPILG--WNHFMQQTSVRREDKCETDFY-DVTWFKVMTAIINFYLPTLLM 187 (452)
T ss_dssp HCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHC--CCC-------CCSSSSCCSCT-TCHHHHHHHHHHHTHHHHHHH
T ss_pred eCccccccccchhHHHHHHHHHHHHHHHHHHHHHH--HHhcccccccCCCCeecCCCc-ccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888553 2222222 23346754322 223355566778899999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhh
Q psy6126 159 VVCYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 159 ~~~y~~i~~~l~~~~~~~~~~~ 180 (214)
+++|+.|++.++++.++.+...
T Consensus 188 ~~~y~~I~~~l~~~~~~~~~~~ 209 (452)
T 3rze_A 188 LWFYAKIYKAVRQHCNIFEMLR 209 (452)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHhh
Confidence 9999999999998876655443
No 5
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.95 E-value=6.8e-29 Score=202.48 Aligned_cols=173 Identities=18% Similarity=0.320 Sum_probs=142.3
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++++++.+|+.+...+.+.|.+|+..|++..++..++..+|++++++||+|||+||
T Consensus 63 ~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI 142 (500)
T 2rh1_A 63 TAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 142 (500)
T ss_dssp HHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 45677889999999999999999999999899998888888889999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCC----CCCCchhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPD----DYGHSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~----~~~~~~~~~~~~~~~~~p~~~ 157 (214)
++|++|++.++++++..+++++|++++++++++++..+... .+.....|..... .....|..+..++.+++|+++
T Consensus 143 ~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~i 221 (500)
T 2rh1_A 143 TSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVI 221 (500)
T ss_dssp HSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHH
T ss_pred eccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999865443223222 1122224433221 122334455667778999999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMK 175 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~ 175 (214)
++++|++|++.+|++.++
T Consensus 222 i~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 222 MVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp HHHHHHHHHHHHHHHCSH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998776
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.95 E-value=2.1e-29 Score=203.09 Aligned_cols=176 Identities=19% Similarity=0.429 Sum_probs=146.7
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.++. +|+.+.....++|.++...|++..++..++..+|++++++||+|||++|
T Consensus 40 ~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 118 (464)
T 4dkl_A 40 YVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAV 118 (464)
T ss_dssp HHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456778899999999999999999999976 8888888888899999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCC----CchhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYG----HSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~~~~~~~~p~~~ 157 (214)
++|++|++..+++++..+++++|++++++++|+++... ..+......|........ ..+..+..++.+++|+++
T Consensus 119 ~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~--~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i 196 (464)
T 4dkl_A 119 CHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMAT--TKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLI 196 (464)
T ss_dssp HCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBC--CEEETTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred hccccccccccccHhHHhHHHHHHHHHHHHHHHHHhee--ecccCCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876422 233344456765433322 123344566778999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~~~~~~ 180 (214)
++++|+.|++.+++++++.+...
T Consensus 197 i~~~y~~i~~~l~~~~~~~~~~~ 219 (464)
T 4dkl_A 197 ITVCYGLMILRLKSVRNIFEMLR 219 (464)
T ss_dssp HHHHHHHHHHHCCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhhhhc
Confidence 99999999999998777555443
No 7
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.95 E-value=6.7e-28 Score=197.48 Aligned_cols=165 Identities=20% Similarity=0.268 Sum_probs=133.0
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|+++|+|++|||++|++++++..|..+.. ....|..+...|++..++..++.++|++++++||+|||+||
T Consensus 86 ~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI 164 (520)
T 3v2y_A 86 LTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITM 164 (520)
T ss_dssp HHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEE
Confidence 45678899999999999999999999998888877766 45678889999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYGHSPKEFLFLVAFVIPCISIVVC 161 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 161 (214)
+ |++|+...+++++..+++++|++++++++|++++ +... .+...|...+.... ..+....++.+++|+++++++
T Consensus 165 ~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~---~~~~~C~~~~~~~~-~~~~~~~~~~~~lPl~ii~~~ 238 (520)
T 3v2y_A 165 L-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMG-WNCI---SALSSCSTVLPLYH-KHYILFCTTVFTLLLLSIVIL 238 (520)
T ss_dssp C-C-------CCHHHHHHHHHHHHHHHHHHHTTTTT-CBCT---TCGGGBCSSSTTBB-HHHHHHHHHHHHHHHHHHHHH
T ss_pred e-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHe-eccc---cCCCcccccCCccc-hHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999998876 3333 34457875443332 233344456799999999999
Q ss_pred HHHHHHHHHhhh
Q psy6126 162 YARIFYIVRKTA 173 (214)
Q Consensus 162 y~~i~~~l~~~~ 173 (214)
|++|++.+|+++
T Consensus 239 Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 239 YCRIYSLVRTRN 250 (520)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999999876
No 8
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.95 E-value=1.6e-27 Score=191.80 Aligned_cols=177 Identities=27% Similarity=0.485 Sum_probs=147.0
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhh-hhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhhee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFN-LPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVM 80 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~-~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 80 (214)
+++.++|++|++.|++++|||++|++.+++. +|..+.....++|.+++..|++..++...+..+|++++++||+|||++
T Consensus 57 ~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~a 136 (448)
T 2z73_A 57 YLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNV 136 (448)
T ss_dssp HHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567788899999999999999999998764 788877777788999999999999999999999999999999999999
Q ss_pred eeccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCCC---chhHHHHHHHHHHHHHH
Q psy6126 81 IGHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYGH---SPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 81 I~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~---~~~~~~~~~~~~~p~~~ 157 (214)
|++|++|++..+++++..+++++|++++++++++++. +.....+.....|.......+. .+.....++.+++|+++
T Consensus 137 I~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~i 215 (448)
T 2z73_A 137 IGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG-WGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILI 215 (448)
T ss_dssp TTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGT-SSCEEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHH
T ss_pred ccccccccceechhHHHHHHHHHHHHHHHHHHHHHhc-eeeeeecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988775 4444445555577664333221 22333456668999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMKSRAM 179 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~~~~~ 179 (214)
++++|..|++.++++.++.+..
T Consensus 216 i~~~y~~I~~~l~~~~~~~~~~ 237 (448)
T 2z73_A 216 IFFCYFNIVMSVSNHEKEMAAM 237 (448)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887765543
No 9
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.95 E-value=1e-28 Score=202.00 Aligned_cols=178 Identities=19% Similarity=0.310 Sum_probs=145.6
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.++|++|++.|++++|||++|++.+++.+|..+.....+.|.+++..|++..++..++..+|++++++||+|||++|
T Consensus 205 ~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI 284 (514)
T 3sn6_R 205 TAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 284 (514)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35678889999999999999999999998899999888888889999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecC----CCCCCchhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILP----DDYGHSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~----~~~~~~~~~~~~~~~~~~p~~~ 157 (214)
++|++|++..+++++..+++++|++++++++++++..+..... .+...|.... ......+..+..++.+++|+++
T Consensus 285 ~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~-~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~i 363 (514)
T 3sn6_R 285 TSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH-QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVI 363 (514)
T ss_dssp HSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC----CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHH
T ss_pred CCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceeccc-CcccceeecccccccccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987766543333222 2222332221 1223345556677889999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~~~~~~ 180 (214)
++++|.+|++.+|++.++.+...
T Consensus 364 i~~~y~~I~~~l~~~~~~~~~~~ 386 (514)
T 3sn6_R 364 MVFVYSRVFQEAKRQLQKIDKSE 386 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhcccccc
Confidence 99999999999998877655443
No 10
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.95 E-value=6.1e-29 Score=193.52 Aligned_cols=171 Identities=23% Similarity=0.409 Sum_probs=142.5
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.++|++|++.|+++.|||++|++.++..+|..+.....+.|..++..|++..++...+..+|++++++||+|||+||
T Consensus 61 ~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI 140 (349)
T 1u19_A 61 YVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVV 140 (349)
T ss_dssp HHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 45677889999999999999999999999889988887777889999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCC-----CCchhHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDY-----GHSPKEFLFLVAFVIPCI 156 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-----~~~~~~~~~~~~~~~p~~ 156 (214)
++|++|++ .+++++...++.+|+++++.++|++++ +..+..+.....|....... ...+.....++.+++|++
T Consensus 141 ~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ 218 (349)
T 1u19_A 141 CKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVG-WSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLI 218 (349)
T ss_dssp TCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTT-SSCCEEETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHH
T ss_pred eCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHh-eeeeeccCCceeecccccCccccccchHHHHHHHHHHHHHHHH
Confidence 99999887 689999999999999999999998875 44444444455776543321 122333445667899999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q psy6126 157 SIVVCYARIFYIVRKTAM 174 (214)
Q Consensus 157 ~~~~~y~~i~~~l~~~~~ 174 (214)
+++++|.+|++.+|++.+
T Consensus 219 ii~~~y~~i~~~l~~~~~ 236 (349)
T 1u19_A 219 VIFFCYGQLVFTVKEAAA 236 (349)
T ss_dssp HHHHHHTTTTTSSCSCCC
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999998887654
No 11
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.95 E-value=3.4e-28 Score=197.99 Aligned_cols=176 Identities=19% Similarity=0.264 Sum_probs=144.5
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.+ +.+|..+..... +|.+++..|++..++..++..+|++++++||+|||+||
T Consensus 71 ~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 148 (502)
T 3odu_A 71 LVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAI 148 (502)
T ss_dssp HHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 4567888999999999999999999996 678887776654 69999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCC--CCchhHHHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDY--GHSPKEFLFLVAFVIPCISIV 159 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~~~~~~~p~~~~~ 159 (214)
++|++|++..+++++..+++++|++++++++|+++... .........|....... ...+.....++.+++|+++++
T Consensus 149 ~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~ 226 (502)
T 3odu_A 149 VHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN--VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVIL 226 (502)
T ss_dssp HCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEE--EEECSSSEEEEECCSSHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ecccccccccchhHHHHhhhHHHHHHHHHHHHHHHhee--eeccCCceEEeecCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876422 22334455787543221 112333345777899999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhh
Q psy6126 160 VCYARIFYIVRKTAMKSRAMNM 181 (214)
Q Consensus 160 ~~y~~i~~~l~~~~~~~~~~~~ 181 (214)
++|++|++.++++.++.+....
T Consensus 227 ~~y~~I~~~l~~~~~~~~~~~~ 248 (502)
T 3odu_A 227 SCYCIIISKLSHSGSNIFEMLR 248 (502)
T ss_dssp HHHHHHHHHGGGCSCCHHHHHH
T ss_pred HHHHHHHHHHhhcccchhhhhh
Confidence 9999999999998776655443
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.95 E-value=5.4e-28 Score=195.82 Aligned_cols=171 Identities=21% Similarity=0.417 Sum_probs=144.2
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhc-ccccccccccchhhHHHHHHHHHHHHHHHHHHHHhhee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQ-RAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVM 80 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 80 (214)
+++.+++++|++.|+|++|||++|++.+++.+|..+..... +.|.++...|++..++..++..+|++++++||+|||++
T Consensus 61 ~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 140 (481)
T 3pbl_A 61 MAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTA 140 (481)
T ss_dssp HHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678889999999999999999999998889988876655 67999999999999999999999999999999999999
Q ss_pred eeccCCc---CccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCCCchhHHHHHHHHHHHHHH
Q psy6126 81 IGHPTLY---PKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYGHSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 81 I~~P~~~---~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~p~~~ 157 (214)
|++|++| .+..+.+++..+++++|++++++++|+++.. .. ......|... ...+..+..++.+++|+++
T Consensus 141 I~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~-~~---~~~~~~C~~~----~~~~~~~~~~~~~~ip~~i 212 (481)
T 3pbl_A 141 VVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGF-NT---TGDPTVCSIS----NPDFVIYSSVVSFYLPFGV 212 (481)
T ss_dssp HHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTT-CC---CSSTTCCSCC----CHHHHHHHHHHHTHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhee-cc---cCCCCccccc----CccHHHHHHHHHHHHHHHH
Confidence 9999998 6777889999999999999999999987652 22 2334467542 2335566678889999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~~~~~~ 180 (214)
++++|+.|++.+++++++.....
T Consensus 213 i~~~y~~i~~~l~~~~~~~~~~~ 235 (481)
T 3pbl_A 213 TVLVYARIYVVLKQRRRKNIFEM 235 (481)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999999999999876654443
No 13
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.95 E-value=9.1e-30 Score=195.35 Aligned_cols=175 Identities=20% Similarity=0.346 Sum_probs=140.3
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.++|++|++.|+++.|||++|++.++..+|..+.....++|..|+..|++..++...+..+|++++++||+|||++|
T Consensus 34 ~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 113 (315)
T 4amj_A 34 AAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAI 113 (315)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35667888999999999999999999998889998888888899999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCC----CCCCchhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPD----DYGHSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~----~~~~~~~~~~~~~~~~~p~~~ 157 (214)
++|++|++..+++++..+++.+|+++++.+.|+.+..+.. ..+.....|...+. .....+.....++.+++|+++
T Consensus 114 ~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~i 192 (315)
T 4amj_A 114 TSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWR-DEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLI 192 (315)
T ss_dssp HCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHH
T ss_pred ccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhcc-ccCCCccccccccccchhhcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998877643222 22222234543222 122234444455667899999
Q ss_pred HHHHHHHHHHHHHhhhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMKSR 177 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~~~ 177 (214)
++++|.+|++.++++.++.+
T Consensus 193 i~~~y~~i~~~~~~~~~~~~ 212 (315)
T 4amj_A 193 MIFVALRVYREAKEQIRKID 212 (315)
T ss_dssp HHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 99999999999998766543
No 14
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.94 E-value=5.4e-28 Score=189.39 Aligned_cols=168 Identities=15% Similarity=0.268 Sum_probs=138.7
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.++|++|++.|+++.|||++|++.+++.+|..+.....++|..++..|++..++...+..+|++++++||+|||+||
T Consensus 55 ~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI 134 (364)
T 2ks9_A 55 WIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAI 134 (364)
T ss_dssp HHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999999999998888988877777889999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCC-----CchhHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYG-----HSPKEFLFLVAFVIPCI 156 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~-----~~~~~~~~~~~~~~p~~ 156 (214)
++|++|+ .++++...+++++|+++++.++|.+.. .....+.....|...+.... ..+.....++.+++|++
T Consensus 135 ~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~--~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 210 (364)
T 2ks9_A 135 IHPLQPR--LSATATKVVICVIWVLALLLAFPQGYY--STTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLL 210 (364)
T ss_dssp HCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTT--SCCCBCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHH
T ss_pred hhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHH--hhheecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 488889999999999999999987653 33334444556865433221 12334456677899999
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy6126 157 SIVVCYARIFYIVRKTA 173 (214)
Q Consensus 157 ~~~~~y~~i~~~l~~~~ 173 (214)
+++++|..|++.+++++
T Consensus 211 ii~~~y~~i~~~l~~~~ 227 (364)
T 2ks9_A 211 VIGYAYTVVGITLWASE 227 (364)
T ss_dssp HHHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999887643
No 15
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.94 E-value=1e-27 Score=194.38 Aligned_cols=176 Identities=21% Similarity=0.350 Sum_probs=140.7
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.+++.+|..+.... .|..+...|++..++..++..+|++++++||+|||++|
T Consensus 44 ~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 121 (488)
T 3eml_A 44 WAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 121 (488)
T ss_dssp HHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeE
Confidence 4567888899999999999999999999888998776543 67888899999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhcccccccc----CccceeeecC-------CCCCCchhHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLE----PSIGSCSILP-------DDYGHSPKEFLFLVA 150 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~----~~~~~C~~~~-------~~~~~~~~~~~~~~~ 150 (214)
++|++|++..+++++..+++++|++++++++|++++ +...... .....|.... ......+..+..++.
T Consensus 122 ~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (488)
T 3eml_A 122 RIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFAC 200 (488)
T ss_dssp SCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGT-CCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHH
T ss_pred ecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccccccccccccccceeeccccccchhHHHhHHHHH
Confidence 999999999999999999999999999999998775 3322221 1122343221 111111233346778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy6126 151 FVIPCISIVVCYARIFYIVRKTAMKSRAMN 180 (214)
Q Consensus 151 ~~~p~~~~~~~y~~i~~~l~~~~~~~~~~~ 180 (214)
+++|+++++++|+.|++.++++.++.+...
T Consensus 201 ~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~ 230 (488)
T 3eml_A 201 VLVPLLLMLGVYLRIFLAARRQLNIFEMLR 230 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 899999999999999999999877665543
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=189.80 Aligned_cols=170 Identities=22% Similarity=0.380 Sum_probs=135.5
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|++++|||++|++. ++.+|..+.....+.|..+...|++..++..++..+|++++++||+|||++|
T Consensus 148 ~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 226 (434)
T 4ea3_A 148 YVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAI 226 (434)
T ss_dssp HHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEE
Confidence 456788999999999999999999998 4678888888878889999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeecCCCCCC----chhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSILPDDYGH----SPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~----~~~~~~~~~~~~~p~~~ 157 (214)
++|++|++..+++++..+++++|++++++++|.++... ...+.....|......... .+.....++.+++|+++
T Consensus 227 ~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~--~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~i 304 (434)
T 4ea3_A 227 CHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGS--AQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLV 304 (434)
T ss_dssp HCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEE--ECCCSSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred EcccccccccchhhhHHhhhhhhhHHHHHHhhHheeee--eEeecCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998776422 2333445577664433221 23344567778999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q psy6126 158 IVVCYARIFYIVRKTAM 174 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~ 174 (214)
++++|.+|++.+|++++
T Consensus 305 i~~~y~~I~~~l~~~~~ 321 (434)
T 4ea3_A 305 ISVCYSLMIRRLRGVRL 321 (434)
T ss_dssp HHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHhhccc
Confidence 99999999999987553
No 17
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=175.23 Aligned_cols=170 Identities=21% Similarity=0.387 Sum_probs=130.2
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.++|++|+++|+++.|||++|++.++ .+|....... .+|..|+..|+...++...+..+|++++++||+|||+||
T Consensus 34 ~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI 111 (296)
T 2lnl_A 34 LVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAI 111 (296)
T ss_dssp HHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence 45678899999999999999999999985 4676665544 469999999999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCccceeeec-CC---CCCCchhHHHHHHHHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPSIGSCSIL-PD---DYGHSPKEFLFLVAFVIPCIS 157 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~-~~---~~~~~~~~~~~~~~~~~p~~~ 157 (214)
++|++|+... +++...+++.+|+.+++.++|+.... .....+.....|... .. .....+........+++|+.+
T Consensus 112 ~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i 189 (296)
T 2lnl_A 112 VHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFR-QAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFV 189 (296)
T ss_dssp SSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTS-SCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHH
T ss_pred hhccccchhh-hhhhHheehHHHHHHHHHhcchhhcc-eeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 9999988764 45667778889999999999987653 322222222222211 11 122233344467788999999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q psy6126 158 IVVCYARIFYIVRKTAMK 175 (214)
Q Consensus 158 ~~~~y~~i~~~l~~~~~~ 175 (214)
+..+|.++.+.++++.++
T Consensus 190 ~~~~y~~i~~~~~~~~~~ 207 (296)
T 2lnl_A 190 MLFCYGFTLRTLFKAHMG 207 (296)
T ss_dssp HHHHHHHHTTTSSSCCCH
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999988877665443
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.93 E-value=2.3e-27 Score=190.38 Aligned_cols=174 Identities=21% Similarity=0.366 Sum_probs=136.0
Q ss_pred cceeccCCCCCchhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHhheee
Q psy6126 2 SPFRRPSTVRNATAVFIINLSVSDLMFCCFNLPLAASTFWQRAWTHGHLLCQLFPLLRYGLLAVSLFTVLGITINRYVMI 81 (214)
Q Consensus 2 ~~v~~~~~~~~~~~~~i~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 81 (214)
+++.+++++|++.|+|++|||++|++.+++.+|..+... ..|..+...|++..++...+..+|++++++||+|||++|
T Consensus 54 ~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI 131 (447)
T 4eiy_A 54 WAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 131 (447)
T ss_dssp HHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEE
Confidence 356678889999999999999999999988899877643 357778899999999999999999999999999999999
Q ss_pred eccCCcCccccccchhhhhHHHHHHHHHHhhhhhhhccccccccCc----cceeeecC-------CCCCCchhHHHHHHH
Q psy6126 82 GHPTLYPKLYSSKFLAFMVACTWLFGFGALVPTWLGVWGRFGLEPS----IGSCSILP-------DDYGHSPKEFLFLVA 150 (214)
Q Consensus 82 ~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~----~~~C~~~~-------~~~~~~~~~~~~~~~ 150 (214)
++|++|++..+++++..+++++|++++++++|++++ +.....+.. ...|.... ......+..+..++.
T Consensus 132 ~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (447)
T 4eiy_A 132 RIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFAC 210 (447)
T ss_dssp HCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGT-CSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCC
T ss_pred ecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhhe-eccccccCccccccccccccchhhccccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999998775 332222111 11233211 111111111123456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy6126 151 FVIPCISIVVCYARIFYIVRKTAMKSRA 178 (214)
Q Consensus 151 ~~~p~~~~~~~y~~i~~~l~~~~~~~~~ 178 (214)
+++|+++++++|++|++.+|++.++.+.
T Consensus 211 ~~lP~~ii~~~y~~I~~~l~~~~~~~~~ 238 (447)
T 4eiy_A 211 VLVPLLLMLGVYLRIFLAARRQLADLED 238 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 7899999999999999999998765543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.90 E-value=1.6e-10 Score=57.25 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhheeeeccCCcCccccccc
Q psy6126 65 VSLFTVLGITINRYVMIGHPTLYPKLYSSKF 95 (214)
Q Consensus 65 ~s~~~l~~is~dRy~aI~~P~~~~~~~t~~~ 95 (214)
+|++++++||+|||+||++|++|....++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988777653
No 20
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=69.13 E-value=8.4 Score=18.73 Aligned_cols=17 Identities=18% Similarity=0.254 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhhhh
Q psy6126 159 VVCYARIFYIVRKTAMK 175 (214)
Q Consensus 159 ~~~y~~i~~~l~~~~~~ 175 (214)
++.|..+.+--+|+.++
T Consensus 14 ~ifYFl~iRPQ~Kr~K~ 30 (37)
T 2rdd_B 14 LIFYFMILRPQQKRTKE 30 (37)
T ss_dssp HHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHH
Confidence 55676666555554443
No 21
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=45.68 E-value=26 Score=16.91 Aligned_cols=21 Identities=10% Similarity=0.366 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy6126 144 EFLFLVAFVIPCISIVVCYAR 164 (214)
Q Consensus 144 ~~~~~~~~~~p~~~~~~~y~~ 164 (214)
.....++.++|.++.++.|++
T Consensus 8 fiAt~Lfi~iPt~FLlilYvq 28 (36)
T 3arc_M 8 LIATALFVLVPSVFLIILYVQ 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhe
Confidence 344567788999999999975
No 22
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=21.08 E-value=73 Score=16.60 Aligned_cols=14 Identities=14% Similarity=0.176 Sum_probs=10.6
Q ss_pred HHHHHHHHHhhhhh
Q psy6126 162 YARIFYIVRKTAMK 175 (214)
Q Consensus 162 y~~i~~~l~~~~~~ 175 (214)
|++|++.+|++.+.
T Consensus 2 y~~I~~~Iw~~~~~ 15 (52)
T 2jx4_A 2 QVLIFREIHASLVP 15 (52)
T ss_dssp CHHHHHHHHHHHTH
T ss_pred eEEEEeHHHhhCCc
Confidence 67888889887653
No 23
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=20.70 E-value=31 Score=16.94 Aligned_cols=21 Identities=5% Similarity=0.195 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q psy6126 153 IPCISIVVCYARIFYIVRKTA 173 (214)
Q Consensus 153 ~p~~~~~~~y~~i~~~l~~~~ 173 (214)
+.++++++....|...+|++.
T Consensus 15 lal~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 15 LALVVLTIISLIILIMLWQKK 35 (39)
Confidence 333444444444555566643
Done!