RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6127
(515 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 113 bits (283), Expect = 1e-28
Identities = 57/305 (18%), Positives = 113/305 (37%), Gaps = 22/305 (7%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275
+ + + + S+++S S+D I ++D E G + T+ V I F HS
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
S + L + +R GH VSS+++ P D +S S DKT+++W+
Sbjct: 72 KLLASCSADMTIKLWD--FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 336 LRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD--------KGPFA 386
++ V + + +G A N +++++ V + + +
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 387 SFKCPGERGCEWTG-------LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439
E K G +L + I+++D G C+ +L G N
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 440 NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499
F +F+ S + D + +W+ + + L+ H V SL F+ +
Sbjct: 250 VRG---VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVV 305
Query: 500 SACSN 504
+ +
Sbjct: 306 TGSVD 310
Score = 71.3 bits (173), Expect = 3e-14
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHA 281
+ G L+S S D I ++D G T+ V + F +
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265
Query: 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
+ D TLR + + ++ H V+SL+ ++GS D+TV+VW+
Sbjct: 266 AD--DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 71.3 bits (173), Expect = 4e-14
Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 19/188 (10%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
V++ K F + + + + + DG+L+ SCS+D + ++ K + ++ V+
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 268 LIKFTHSKTTAIHA------------------STKVDATLRYLSLHDNKYVRYFPGHVRK 309
I + + + + S D T++ + + GH
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA-AYDPEGLAFAIGVN 368
V + +S + DKT+RVWD + + + + + + G
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309
Query: 369 SDSIKLYD 376
++K+++
Sbjct: 310 DQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 103 bits (256), Expect = 6e-25
Identities = 53/295 (17%), Positives = 99/295 (33%), Gaps = 9/295 (3%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF 271
R + R + KI ++ + +D LL+S S D ++II+D + I + V +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 272 THSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329
S ++ L + R GH +S + S
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 330 TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK 389
+G+ + P+ F G S KL+DVR +F
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE--GMCRQTFT 223
Query: 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449
+ + F P+G ++ + RLFD + + N +F+
Sbjct: 224 GHES---DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT-YSHDNIICGITSVSFS 279
Query: 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
+ + +G D ++W+A + + VL G H + V L +A+ +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWD 333
Score = 82.5 bits (202), Expect = 9e-18
Identities = 23/128 (17%), Positives = 49/128 (38%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
VR + F + IN++ + +G+ + SDD ++D T +
Sbjct: 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG 272
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327
+ + SK+ + + D GH +VS L ++ + +GS+
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332
Query: 328 DKTVRVWD 335
D +++W+
Sbjct: 333 DSFLKIWN 340
Score = 62.8 bits (151), Expect = 3e-11
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 1/154 (0%)
Query: 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST 283
+ SL + D L +S + D ++D +G + T + ++ I F + S
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343
L L + ++S++ S ++G D VWD + + G
Sbjct: 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306
Query: 344 MIQLSGNKPIA-AYDPEGLAFAIGVNSDSIKLYD 376
++ N+ +G+A A G +K+++
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 61.7 bits (148), Expect = 6e-11
Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 11/255 (4%)
Query: 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315
+ K + + + T + +D + + R GH+ K+ +++
Sbjct: 8 RQEAEQLKNQIRDARKACADATLSQITNNID----PVGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA-AYDPEGLAFAIGVNSDSIKL 374
+S S D + +WD N V I L + + AY P G A G + +
Sbjct: 64 GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123
Query: 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434
Y++++ + S + G G + + + + +
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT-- 181
Query: 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494
+ + + PD++ SG+ D +W+ G G H S + ++ F P
Sbjct: 182 ---GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPN 237
Query: 495 YHMLASACSNMAFWI 509
+ A+ + +
Sbjct: 238 GNAFATGSDDATCRL 252
Score = 28.5 bits (62), Expect = 1.9
Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 477 VLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTL 512
L G H + + ++ + +L SA + I
Sbjct: 50 TLRG-HLAKIYAMHWGTDSRLLVSASQDGKLIIWDS 84
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 91.8 bits (226), Expect = 9e-21
Identities = 59/320 (18%), Positives = 126/320 (39%), Gaps = 36/320 (11%)
Query: 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTA 278
++T + + +S+DG L + + +Y G+ ++ + ++ ++
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 279 IH----------------ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322
A+ D +R + + K V GH + + SL+ P D
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 323 ISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+SGS D+TVR+WDLR + + G +A +G A G +++++D +
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 382 KGPFASFKCPGERGCEW--TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS------- 432
+ G + + F+ DG+ ++ + ++L++ N N
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 433 --LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL- 489
+ + L T + +++ SGS D V W+ + G + +L G H ++V S+
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVA 357
Query: 490 -----QFNPKYHMLASACSN 504
P+Y++ A+ +
Sbjct: 358 VANGSSLGPEYNVFATGSGD 377
Score = 87.5 bits (215), Expect = 2e-19
Identities = 63/378 (16%), Positives = 119/378 (31%), Gaps = 32/378 (8%)
Query: 124 AQKAVPKILKIVAKSENMCNLTKLDLPYNKL------GSWDFELLHSLSSLESPHFVS-- 175
K +P L + L K Y L D EL SL V
Sbjct: 12 HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71
Query: 176 ----LFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS 231
T ++ + S +R + N + I S+ +S
Sbjct: 72 NDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291
DG L + ++D I I+D E + + + + + S + S T+R
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR--TVRI 189
Query: 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK 351
L + + +GS D+ VRVWD V +
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249
Query: 352 PIA--------AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW----- 398
+ +G + G S+KL+++++ + + G +
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD 309
Query: 399 --TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG---VLNNNASPLEATFTPDSQ 453
+ + + + IL + + +D +GN + L G + + A ++ P+
Sbjct: 310 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 369
Query: 454 FVASGSTDGQVHIWNAER 471
A+GS D + IW ++
Sbjct: 370 VFATGSGDCKARIWKYKK 387
Score = 49.0 bits (115), Expect = 8e-07
Identities = 41/234 (17%), Positives = 85/234 (36%), Gaps = 34/234 (14%)
Query: 305 GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-----------------L 347
H V + S D +++ +KT +V+ + + V +
Sbjct: 60 DHTSVVCCVKFSN-DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 348 SGNKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405
S + I + P+G A G I+++D+ + ++ P
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF-----P 173
Query: 406 DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465
G ++ + +R++D G C + + + A D +++A+GS D V
Sbjct: 174 SGDKLVSGSGDRTVRIWDLRTGQCSLT---LSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 230
Query: 466 IWNAERGYKVCVLDGD------HPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
+W++E G+ V LD + H +V S+ F + S + + + L
Sbjct: 231 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
Score = 40.6 bits (93), Expect = 3e-04
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 18/128 (14%)
Query: 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457
L + TN I A L L++ + F+ D +++A+
Sbjct: 20 LLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLAT 79
Query: 458 GSTDGQVHIWNAERGYKVCVLDGD-----------------HPSAVQSLQFNPKYHMLAS 500
G + ++ G V L D ++S+ F+P LA+
Sbjct: 80 GC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 138
Query: 501 ACSNMAFW 508
+
Sbjct: 139 GAEDRLIR 146
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 81.4 bits (199), Expect = 2e-17
Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 22/301 (7%)
Query: 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLI 269
+ KV + + D + + G+ ++S SDD+ + ++ G T+ GV
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329
+ + + + + + + + +SGS D
Sbjct: 64 QMRDNIIISGSTDR------TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 330 TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK 389
T+RVWD + + + + +G G +K++D + + +
Sbjct: 118 TLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET--CLHTLQ 174
Query: 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449
G DG ++ + + IR++D GNC+ +L+G + +
Sbjct: 175 -----GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----ME 224
Query: 450 PDSQFVASGSTDGQVHIWNAERGYKVCV--LDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
+ SG+ D V IW+ + G + H SAV LQFN + + +S +
Sbjct: 225 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 508 W 508
W
Sbjct: 285 W 285
Score = 77.2 bits (188), Expect = 5e-16
Identities = 33/236 (13%), Positives = 82/236 (34%), Gaps = 17/236 (7%)
Query: 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298
S D + ++D E G + + V +++ S D ++
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR----RVVSGAYDFMVKVWDPETET 168
Query: 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358
+ GH +V +L +SGS D ++RVWD+ N + + +
Sbjct: 169 CLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMEL 225
Query: 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418
+ G ++K++D+++ + + ++ S++
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC----LQFNKNFVITSSDDGT 281
Query: 419 IRLFDAFNGNCVQSLSGVLN--NNASPLEATFTPDSQFVASGSTDG----QVHIWN 468
++L+D G +++L + + + + A GS +G ++ + +
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 51.7 bits (122), Expect = 8e-08
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Query: 423 DAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH 482
+ L G + + + SGS D + +W+A G + L G H
Sbjct: 2 RRGELKSPKVLKG----HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H 56
Query: 483 PSAVQSLQFNPKYHMLASACSNMAFW 508
V S Q + S + W
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVW 82
Score = 51.7 bits (122), Expect = 9e-08
Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 12/160 (7%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
DG ++S S D I ++D E G +T+ + ++ + I S D+T
Sbjct: 183 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADST 238
Query: 289 LRYLSLHDNKYVRYFPGHVRKVSSLNL-SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL 347
++ + + ++ G + S++ + I+ S D TV++WDL+ + +
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 298
Query: 348 SGNKPI------AAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+ L A+G + + + + D
Sbjct: 299 LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK-LLVLD 337
Score = 45.6 bits (106), Expect = 9e-06
Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 10/117 (8%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
++L+S + D + I+D + G T+ ++ D T
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFNKNFVITSSDDGT 281
Query: 289 LRYLSLHDNKYVRYFP-----GHVRKVSSLNLSPVDDSFISGSYDKT----VRVWDL 336
++ L +++R G V + S GS + T + V D
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 80.6 bits (197), Expect = 3e-17
Identities = 53/289 (18%), Positives = 102/289 (35%), Gaps = 20/289 (6%)
Query: 190 SLAHSRSSRTITKCSENLVRSYRVAK----------VFRENTDKINSLDYSSDGSLLISC 239
++ S +R + + V+ + ++ + I S DG LI
Sbjct: 56 AVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
Query: 240 SDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299
+ + I+D T + S + + S D + LH+
Sbjct: 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175
Query: 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE 359
VR F GH S +++S +G D TVR WDLR+ + + Y P
Sbjct: 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235
Query: 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSII 419
G A+G+ S ++++ V D LKF+ GK + + +++
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPD------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289
Query: 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468
+ G + ++S L + D +++ +GS D + ++
Sbjct: 290 NAWRTPYGASIFQSKE----SSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 70.6 bits (171), Expect = 6e-14
Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 17/289 (5%)
Query: 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-----NSKKYGVDLIKFTHSK 275
+ + ++ S+ + + + ++D +K+ + ++ + K
Sbjct: 51 GEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
T I ++ L+ + +L +SP S D + VWD
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 336 LRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395
L V Q + D+ + +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-----QLQQHDFT 224
Query: 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV 455
+ L + P G+ + V S + + + Q + + + L F ++
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ----LHLHESCVLSLKFAYCGKWF 280
Query: 456 ASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
S D ++ W G + S+V S + + + +
Sbjct: 281 VSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGD 327
Score = 48.3 bits (113), Expect = 1e-06
Identities = 12/79 (15%), Positives = 22/79 (27%)
Query: 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358
H V SL + F+S D + W ++ + S +
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316
Query: 359 EGLAFAIGVNSDSIKLYDV 377
+ G +Y+V
Sbjct: 317 DDKYIVTGSGDKKATVYEV 335
Score = 34.4 bits (77), Expect = 0.029
Identities = 23/211 (10%), Positives = 52/211 (24%), Gaps = 6/211 (2%)
Query: 302 YFPGHV--RKVSSLNLSPVDDSF-ISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358
YF G + + S +++ + D + R + +
Sbjct: 2 YFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISN 61
Query: 359 EGLAFAIGVNSDSIKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417
G +K++D+ +K P + C K PDG ++V S
Sbjct: 62 PTRHVYTGGK-GCVKVWDISHPGNKSPVSQLDCLNRDN-YIRSCKLLPDGCTLIVGGEAS 119
Query: 418 IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV 477
+ ++D + A A + S +
Sbjct: 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179
Query: 478 LDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
++ + + + + W
Sbjct: 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSW 210
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 77.2 bits (188), Expect = 5e-16
Identities = 41/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK---KYGVDL 268
++ ++ + D I+ + SLL+ S D + +Y + + K+ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 269 IKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
F + I+ T L+ + + DD I+ S+D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 329 KTVRVWDLRQPNNVGMIQ-------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+ V D R + + I D +G+N+ ++ + +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL-C 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
+ + + G + + + S+ + + + + S
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240
Query: 442 SPLEAT------------FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
L F+P +F+ + +DG + WN + K+ + +V +
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300
Query: 490 QFNPKYHMLASACSN 504
+ L A S+
Sbjct: 301 ACSDNI--LCLATSD 313
Score = 49.5 bits (116), Expect = 5e-07
Identities = 24/310 (7%), Positives = 73/310 (23%), Gaps = 34/310 (10%)
Query: 190 SLAHSRSSRTITKCSE-NLVRSYRVA--------KVFRENTDKINSLDYSSDGSLLISCS 240
+ S + S + Y+ + ++ + L I
Sbjct: 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75
Query: 241 DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300
I+ G+ + I + D + + +
Sbjct: 76 TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDG 135
Query: 301 RYFPGHVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVG-----MIQLSG 349
++ ++ + + + S + V+ + L +
Sbjct: 136 VIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ 195
Query: 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP----------GERGCEWT 399
+ +A E +A + + +S +
Sbjct: 196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255
Query: 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459
++FSP K + + + II ++ +++ + ++ + +
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSV----VKIACSDNILCLAT 311
Query: 460 TDGQVHIWNA 469
+D A
Sbjct: 312 SDDTFKTNAA 321
Score = 44.1 bits (102), Expect = 2e-05
Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 1/111 (0%)
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVAS 457
+ +K P L+L+++ + ++ L L L F ++ +
Sbjct: 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
G+ G++ + L + + L +A +
Sbjct: 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 73.0 bits (177), Expect = 9e-15
Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 13/307 (4%)
Query: 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV-----AKVFRENTDKINSLDY 229
+LF + A L ++ + I C+ V + V +++ E++ +
Sbjct: 7 ALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKT 66
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
S G S + I+D Q T + + + + A+
Sbjct: 67 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
+ + + ++ + + G
Sbjct: 127 FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 186
Query: 350 NK----PIAAYDPEGLAFAIGVNSDSIKLYDVRS--YDKGPFASFKCPGERGCEWTGLKF 403
Y+P+G FA +I LY+ GL +
Sbjct: 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
SPDG I ++ I++++ +++ + Q + S S +G
Sbjct: 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPV--GTRIEDQQLGIIWTKQALVSISANGF 304
Query: 464 VHIWNAE 470
++ N E
Sbjct: 305 INFVNPE 311
Score = 68.4 bits (165), Expect = 3e-13
Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 8/292 (2%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAS 282
L + G + C+ + T + + K + S
Sbjct: 19 TAVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD 77
Query: 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342
+ + + + P V ++ + I+ + R + +
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG 136
Query: 343 GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLK 402
+ A + V ++ PF GE ++
Sbjct: 137 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 196
Query: 403 FSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN----ASPLEATFTPDSQFVASG 458
++PDG L + I L++ +G N S T++PD +AS
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 459 STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFW 508
S D + IWN + Q L L S +N + F
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 53.4 bits (126), Expect = 3e-08
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 388 FKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446
F P L +P G + NG+ + + + + ++ A
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGD-KIQYCNGTSVYTVPVGSLTDTEIYTE---HSHQTTVA 64
Query: 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNPKYHMLASACSNM 505
+P + ASG G V IW+ + + V+ + ++ + +A+
Sbjct: 65 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 124
Query: 506 AFW 508
+
Sbjct: 125 ERF 127
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 71.0 bits (172), Expect = 3e-14
Identities = 48/299 (16%), Positives = 104/299 (34%), Gaps = 32/299 (10%)
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274
E + + L Y D ++S D+ I I+D K + V +++
Sbjct: 9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334
+ + V N + + + + ++ S D+++ VW
Sbjct: 67 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR------FNNGMMVTCSKDRSIAVW 120
Query: 335 DLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD--SIKLYDVRSYDKGPFASFKCPG 392
D+ P ++ + ++ A + I S +IK+++ + + +
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE--FVRTLN--- 175
Query: 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452
G + +L++ ++ + IRL+D G C++ L G L D+
Sbjct: 176 --GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH-----EELVRCIRFDN 228
Query: 453 QFVASGSTDGQVHIWNAERGYKVCVLDGD--------HPSAVQSLQFNPKYHMLASACS 503
+ + SG+ DG++ +W+ G H V LQF+ + S+
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSH 285
Score = 49.1 bits (115), Expect = 5e-07
Identities = 32/214 (14%), Positives = 74/214 (34%), Gaps = 13/214 (6%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA 354
H + + + V L D +SG D T+++WD ++ +
Sbjct: 3 HSLQRIHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVL 59
Query: 355 AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST 414
+ G + +++++DV + + C + +
Sbjct: 60 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTC-------S 112
Query: 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474
I ++D + + ++ + A+ F D +++ S S D + +WN
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 170
Query: 475 VCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
V L+G H + LQ+ + + S+ + + W
Sbjct: 171 VRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLW 203
Score = 49.1 bits (115), Expect = 6e-07
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 7/125 (5%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275
V N K L++S S D+ I ++D E G + + V I+F + +
Sbjct: 171 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR 230
Query: 276 TTAIHASTKV-----DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330
+ K+ A L + +R H +V L +S S+D T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDT 288
Query: 331 VRVWD 335
+ +WD
Sbjct: 289 ILIWD 293
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 66.8 bits (161), Expect = 1e-12
Identities = 41/342 (11%), Positives = 85/342 (24%), Gaps = 36/342 (10%)
Query: 190 SLAHSRSSRTITKCSEN-LVRSYRVA-------KVFRENTDKINSLDYSSDGSLLISCSD 241
A ++ I C N V Y + +E+ ++ +D++ D + +++C
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK--- 298
D ++ + T K T+ + + A +
Sbjct: 72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131
Query: 299 -YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYD 357
V SL+ P +GS D R++ + +
Sbjct: 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 191
Query: 358 PEGLAFAI---GVNSDSIKLYD-----------VRSYDKGPFASFKCPGERGCEWTGLKF 403
+ V+ V D + + F
Sbjct: 192 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 251
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
+ L+ + LF + S G L+ + T +F + D +
Sbjct: 252 ITESSLVAAGHDCF-PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF---QNLDKK 307
Query: 464 VHIWNAERGYKVCVLDGDHPSAVQSLQFNP----KYHMLASA 501
LD H ++V + K +
Sbjct: 308 ASSEG--SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 347
Score = 57.9 bits (138), Expect = 1e-09
Identities = 35/301 (11%), Positives = 82/301 (27%), Gaps = 62/301 (20%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHA 281
+ I+ ++ D + + C ++ ++ IY+
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ------------------------ 43
Query: 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN 341
V H +V+ ++ +P + ++ D+ VW L+
Sbjct: 44 ------------------VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85
Query: 342 VGMIQLS---GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398
+ + + P FA+G S I + + R
Sbjct: 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 145
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE------------- 445
+ L S + R+F A+ + + + P
Sbjct: 146 SLDWHPNSVLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204
Query: 446 --ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
F+ + VA S D V + +A++ + ++ F + ++A+
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAGHD 263
Query: 504 N 504
Sbjct: 264 C 264
Score = 57.2 bits (136), Expect = 2e-09
Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA-TFTPDSQFVAS 457
+ ++ D I + N + +++ VQ L + + + PDS + +
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAPDSNRIVT 68
Query: 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
TD ++W + L + + S
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
Score = 52.9 bits (125), Expect = 5e-08
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 448 FTPDSQFVASGSTDGQVHIWNAERG--YKVCVLDGDHPSAVQSLQFNPKYHMLASACSNM 505
+ D +A + +VHI+ +V L H V + + P + + + ++
Sbjct: 15 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDR 73
Query: 506 AFWI 509
++
Sbjct: 74 NAYV 77
Score = 51.4 bits (121), Expect = 1e-07
Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 8/139 (5%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
T + ++ + ++ SL+ + D +++ + K + +
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPK 288
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS----FI 323
+ + TA +D H VS +++ + F
Sbjct: 289 --QSSQRGLTARERFQNLDKKAS-SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 324 SGSYDKTVRVWDLRQPNNV 342
+ D + +WD+R +
Sbjct: 346 TTGMDGGMSIWDVRSLESA 364
Score = 43.3 bits (100), Expect = 4e-05
Identities = 21/174 (12%), Positives = 48/174 (27%), Gaps = 5/174 (2%)
Query: 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-NKPI--AAYDP 358
Y V +S + + V +++ V + +L N + + P
Sbjct: 2 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61
Query: 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418
+ + ++ ++ P + S SI
Sbjct: 62 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472
+ ++ L + P+S +A+GS D + I++A
Sbjct: 122 CYFEQ--ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 66.4 bits (160), Expect = 2e-12
Identities = 38/316 (12%), Positives = 79/316 (25%), Gaps = 52/316 (16%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKKY- 264
+ + + + + DGS + S D + ++D I
Sbjct: 41 IGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 100
Query: 265 ------GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPV 318
+ T T + + + L + R
Sbjct: 101 RFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---CYHIFPTA 157
Query: 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI-------AAYDPEGLAFAIGVNSDS 371
D+F D ++ + P AY + +
Sbjct: 158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGK 217
Query: 372 IKLYDVRSYD-------KGPFASFKCPGERGCEWTGLKFSPDGKLILV----------ST 414
I D+ S D + + + G R W + + I + T
Sbjct: 218 IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 277
Query: 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNAERG 472
+ + DA G + + D + A + D ++I +AE G
Sbjct: 278 ASRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 333
Query: 473 YKVCVLD--GDHPSAV 486
++ ++ G P +
Sbjct: 334 EELRSVNQLGHGPQVI 349
Score = 47.5 bits (111), Expect = 2e-06
Identities = 23/198 (11%), Positives = 49/198 (24%), Gaps = 24/198 (12%)
Query: 186 TMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQI 245
S + +E E+ IN YS L+ + +I
Sbjct: 159 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKI 218
Query: 246 IIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAI------------------HASTKV 285
D G + + + +
Sbjct: 219 HQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 278
Query: 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS--FISGSYDKTVRVWDLRQPNNVG 343
+ L + + F ++ S+N+S + + + DKT+ + D +
Sbjct: 279 SRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 337
Query: 344 MIQLSGNKP-IAAYDPEG 360
+ G+ P + G
Sbjct: 338 SVNQLGHGPQVITTADMG 355
Score = 45.6 bits (106), Expect = 9e-06
Identities = 29/204 (14%), Positives = 53/204 (25%), Gaps = 24/204 (11%)
Query: 324 SGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG--LAFA--------IGVNSDSIK 373
+ V D +GMI G P +G +A A G +D ++
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMID-GGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVE 81
Query: 374 LYDVRSYD--KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS--IIRLFDAFNGNC 429
++D + G +PDGK +L + + D
Sbjct: 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 141
Query: 430 VQSLSG----VLNNNASPLEATFTPDSQFVASGST-DGQVHIWNAERGYKVCVLDGDHPS 484
+ L + A D +G I + E + +HP+
Sbjct: 142 KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 201
Query: 485 AVQSLQFNPKYHMLASACSNMAFW 508
Q + + +
Sbjct: 202 YSQ----KAGRLVWPTYTGKIHQI 221
Score = 40.5 bits (93), Expect = 3e-04
Identities = 15/121 (12%), Positives = 32/121 (26%), Gaps = 21/121 (17%)
Query: 403 FSPDGKLILVSTNGSI-----IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA- 456
+PD + + V+ + D G + + G N D F+A
Sbjct: 9 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-----PVVADDGSFIAH 63
Query: 457 ---------SGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
G V +++ ++ + + P L + F
Sbjct: 64 ASTVFSRIARGERTDYVEVFDPVTLLPTADIE-LPDAPRFLVGTYPWMTSLTPDGKTLLF 122
Query: 508 W 508
+
Sbjct: 123 Y 123
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 65.0 bits (156), Expect = 3e-12
Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 10/295 (3%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIK 270
+ +V + I +L S+DG L S + I +D G S + + IK
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330
T + + + + L +S D ++ Y
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390
+ + +S N A + A+G + +Y + +
Sbjct: 123 AIYS----HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 391 PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450
P E + + + + N + + + A +++P
Sbjct: 179 PAEITSVAFSNNGAFLVA----TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234
Query: 451 DSQFVASGSTDGQVHIWNAERGYKVCVL-DGDHPSAVQSLQFNPKYHMLASACSN 504
D+ +A+GS D V +WN + ++ G H + + + SA +
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
Score = 55.8 bits (132), Expect = 3e-09
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 427 GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAV 486
G+ Q G +N + + + D + + S +G ++ W+ G V H + +
Sbjct: 2 GSIDQVRYG---HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 58
Query: 487 QSLQFNPKYHMLASACSNMAFWIPT 511
++ K + + + +P
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPA 83
Score = 40.4 bits (92), Expect = 3e-04
Identities = 7/68 (10%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 271 FTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
+ S A+ +D ++ +++ + H + + + + +S D
Sbjct: 230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
Query: 329 KTVRVWDL 336
++ W++
Sbjct: 290 SNIKFWNV 297
Score = 36.5 bits (82), Expect = 0.005
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 317 PVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKP----IAAYDPEGLAFAIGVNSDSI 372
P + +GS D +V VW++ +P++ +I + + E + G +S +I
Sbjct: 234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDS-NI 292
Query: 373 KLYDV 377
K ++V
Sbjct: 293 KFWNV 297
Score = 31.1 bits (68), Expect = 0.32
Identities = 3/35 (8%), Positives = 12/35 (34%)
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249
+ + + + + ++S D I ++
Sbjct: 262 IIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 63.5 bits (153), Expect = 2e-11
Identities = 27/288 (9%), Positives = 60/288 (20%), Gaps = 39/288 (13%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY-------GVDLIKFTHSKTTAIHAS 282
S+ + D + ++D I V +I S +
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342
+ LS+ + + GS ++ DL
Sbjct: 143 FG-SSAAAGLSVPGASDDQLTKSAS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198
Query: 343 GMIQLSGNKPIAAYDPEGLAFAIG---VNSDSIKLYDVRSYDKGPFASFKCP-------- 391
I + + V + + + G
Sbjct: 199 AGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKA 258
Query: 392 -GERGCEWTGLKFSPDGKLILVSTNGSI---------IRLFDAFNGNCVQSLSGVLNNNA 441
R + + + I++ T A G +S
Sbjct: 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GH 314
Query: 442 SPLEATFTPDSQ--FVASGSTDGQVHIWNAERGYKVCVLD-GDHPSAV 486
D A+ + + I++A ++ P ++
Sbjct: 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESL 362
Score = 43.0 bits (100), Expect = 5e-05
Identities = 15/197 (7%), Positives = 46/197 (23%), Gaps = 31/197 (15%)
Query: 189 ASLAHSRSSRT--ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQII 246
S + + A+ + + G L+ + +
Sbjct: 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQG 236
Query: 247 IYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG- 305
T K I+ + G F + + + + ++
Sbjct: 237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK--NTDGIMILTVEHSRSCLAAAE 294
Query: 306 -----------------HVRKVSSLNLSPVDDS--FISGSYDKTVRVWDLRQPNNVGMIQ 346
+ ++ + S + + + + + ++D + ++
Sbjct: 295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Query: 347 LSGNKPIAAYDPEGLAF 363
L PE L+
Sbjct: 355 LDKG-------PESLSV 364
Score = 33.4 bits (75), Expect = 0.052
Identities = 11/116 (9%), Positives = 32/116 (27%), Gaps = 11/116 (9%)
Query: 403 FSPDGKLILVS-----TNGSIIRLFDAFNGNCVQSLSGVLNNN--ASPLEATFTPDSQF- 454
+ ++ + + A G + G + A + F S
Sbjct: 27 PGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSF 86
Query: 455 --VASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
A G V +++ + ++ + S+ ++ + + F+
Sbjct: 87 ARSAKGKRTDYVEVFDPVTFLPIADIEL-PDAPRFSVGPRVHIIGNCASSACLLFF 141
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 62.6 bits (150), Expect = 3e-11
Identities = 40/361 (11%), Positives = 103/361 (28%), Gaps = 67/361 (18%)
Query: 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS------KKYGVD 267
A + + I S+ + +SCS D + ++D + ++N + K G+
Sbjct: 7 ANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 268 LIKF-----THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD--- 319
+ + + A+T L + + + + ++
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 320 ------------DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI-------------- 353
++ T +W + P
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 354 -----AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW-TGLKFSPDG 407
GL A G N+ ++++ ++ + + +KFSP G
Sbjct: 185 QFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243
Query: 408 KLILVSTNGSIIRLFDAFNGNC-------------VQSLSGVLNNNASPLEATFTPDSQF 454
L+ ++ + + + Q+ G +++ + +F +
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 303
Query: 455 VASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ----SLQFNPKYHMLASACSNMAFWIP 510
+ S DG++ W+ + ++ L+ H ++ L + LA ++
Sbjct: 304 LCSAGWDGKLRFWDVKTKERITTLNM-HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 362
Query: 511 T 511
Sbjct: 363 K 363
Score = 50.6 bits (119), Expect = 2e-07
Identities = 28/305 (9%), Positives = 79/305 (25%), Gaps = 54/305 (17%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH--------- 280
+ + L+ + S ++ Y + + +K + A+
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 281 ----ASTKVDATLRYLSLHDNKY------------------VRYFPGHVRKVSSLNLSPV 318
+T V T H V + +S+++S
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE- 194
Query: 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQ-----LSGNKPIAAYDPEGLAFAIGVNSDSIK 373
+G + TV++ +L + + ++ + I + + + DS
Sbjct: 195 RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 254
Query: 374 LYDVRSYDKGPFASFKCPGERGCEWTGLK-------------FSPDGKLILVSTNGSIIR 420
+ Y+ F+ G+ + + +R
Sbjct: 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 314
Query: 421 LFDAFNGNCVQSLSGVLNN-NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD 479
+D + +L+ ++ +A + ++G++ +
Sbjct: 315 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD---VKFLKKGWRSGMGA 371
Query: 480 GDHPS 484
+ S
Sbjct: 372 DLNES 376
Score = 42.9 bits (99), Expect = 7e-05
Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 24/211 (11%)
Query: 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG 253
+ S ++T + + + S+D S G L+ + ++ + I +
Sbjct: 157 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 215
Query: 254 TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL--------------------RYLS 293
S+ ++ S + S A +
Sbjct: 216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 275
Query: 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI 353
H ++ H V SL+ + ++ S +D +R WD++ + L+ +
Sbjct: 276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT--TLNMHCDD 333
Query: 354 AAYDPEGLAFAIGVNSD-SIKLYDVRSYDKG 383
+ + LA +S ++DV+ KG
Sbjct: 334 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 364
Score = 40.2 bits (92), Expect = 5e-04
Identities = 15/121 (12%), Positives = 34/121 (28%), Gaps = 10/121 (8%)
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSL----------SGVLNNNASPLEATFTPDSQ 453
S + + ++++D + SG+ + + +
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 454 FVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
VA+ S G + + R + + + + S + L SN L
Sbjct: 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 140
Query: 514 A 514
A
Sbjct: 141 A 141
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 61.9 bits (149), Expect = 4e-11
Identities = 24/243 (9%), Positives = 52/243 (21%), Gaps = 33/243 (13%)
Query: 297 NKYVRYFPGHVRKVSSLNLSP----------VDDSFISGSYDKTVRVWDLRQPNNVGMIQ 346
K + G ++P G+ V + D ++ G I
Sbjct: 8 KKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIV 65
Query: 347 LSGNK----PIAAYDPE---GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399
+ P G + + + + + + K +
Sbjct: 66 IPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAA------- 118
Query: 400 GLKFSPDGKLILV--STNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD--SQFV 455
+ P G +G + + NG + + A
Sbjct: 119 CVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDY 178
Query: 456 ASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNP--KYHMLASACSNMAFWIPTL 512
+ G V + A ++ + P A N + +
Sbjct: 179 LFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHK 238
Query: 513 SAD 515
D
Sbjct: 239 GTD 241
Score = 54.6 bits (130), Expect = 9e-09
Identities = 20/226 (8%), Positives = 46/226 (20%), Gaps = 35/226 (15%)
Query: 221 TDKINSLDYSSDGSLLI--SCSDDDQIIIYDCEQGTSKNTINSKKYG---VDLIKFTHSK 275
D + G C + + G S + D S+
Sbjct: 114 IDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASR 173
Query: 276 TTAIHASTKVDATLRYLSLHDNKY--VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRV 333
+ T +R +K + + + P + +
Sbjct: 174 YKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYY 233
Query: 334 WDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393
+ + DP + + S + +
Sbjct: 234 V-----------LMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLA------------QQ 270
Query: 394 RGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNGNCVQSLSGV 436
+ ++ S D K + ++ DA G +
Sbjct: 271 KVEPLVSIQVSEDDKPLFYGLTATSDLVV--MDARTGALQHVEKQI 314
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 61.8 bits (148), Expect = 6e-11
Identities = 21/300 (7%), Positives = 66/300 (22%), Gaps = 20/300 (6%)
Query: 220 NTDKINSLDYSSDGSLLISCSDDD--QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTT 277
+I + D + + + IYD G ++ + + + K
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFA 100
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS-------SLNLSPVDDSFISGSYDKT 330
+ T+ + R + + P+ G +
Sbjct: 101 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160
Query: 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390
+ V+D+ + + A+D + D + K
Sbjct: 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 220
Query: 391 PGERGCEW--TGLKFSPDGKLILVS----TNGSIIRLFDAFNGNCVQSLSGVLNNNASPL 444
K P + + + + + ++
Sbjct: 221 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYS 280
Query: 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
+ + G + ++ + + + + L+ + + +
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-----EVKNNLTDLRLSADRKTVMVRKDD 335
Score = 61.8 bits (148), Expect = 6e-11
Identities = 18/197 (9%), Positives = 48/197 (24%), Gaps = 17/197 (8%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL------- 347
+ + + + + SY D N +
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225
Query: 348 -SGNKPIAAYDPEGLAFAIG--VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404
G+ P + G +D K + D G + ++
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285
Query: 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQV 464
+ ++ +D + + + + + D + V DG++
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTD-------LRLSADRKTVMVRKDDGKI 338
Query: 465 HIWNAERGYKVCVLDGD 481
+ + E+ ++ D
Sbjct: 339 YTFPLEKPEDERTVETD 355
Score = 40.2 bits (92), Expect = 5e-04
Identities = 8/40 (20%), Positives = 18/40 (45%)
Query: 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN 260
+ + L S+D ++ DD +I + E+ + T+
Sbjct: 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 37.1 bits (84), Expect = 0.003
Identities = 22/200 (11%), Positives = 52/200 (26%), Gaps = 8/200 (4%)
Query: 314 NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEG--LAFAIGVNS 369
+ SP+D I+ + D+ + ++++ I +
Sbjct: 9 DFSPLDGDLIAFVSRGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREG 65
Query: 370 DSIKLYDVRSYD-KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428
D + +YD R+ + + G + G + T +
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQS 488
++ ++ S A P G +H+++ E + +
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPA 185
Query: 489 LQFNPKYHMLASACSNMAFW 508
+ K S S
Sbjct: 186 FDADSKNLYYLSYRSLDPSP 205
Score = 35.6 bits (80), Expect = 0.013
Identities = 16/185 (8%), Positives = 39/185 (21%), Gaps = 48/185 (25%)
Query: 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVA 214
++ FE++ + V R +T A + YR+
Sbjct: 210 LNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMI 269
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274
+ + + + + ++ YD +
Sbjct: 270 IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------------------ 311
Query: 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334
++ L LS + + D + +
Sbjct: 312 ------------------------------EVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Query: 335 DLRQP 339
L +P
Sbjct: 342 PLEKP 346
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 61.0 bits (146), Expect = 8e-11
Identities = 32/300 (10%), Positives = 72/300 (24%), Gaps = 37/300 (12%)
Query: 224 INSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDL-----IKFTHSKTT 277
+ G + + + ++ D G + I+ + + T
Sbjct: 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT 95
Query: 278 AIHASTKVDATLRYLSLHDNKY---------VRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
+ V L + + + R R+++ L + D
Sbjct: 96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155
Query: 329 KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF 388
V + IQ + A D + + + D P
Sbjct: 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215
Query: 389 KCPGE------RGCEWTGLKFSPDGKLI----------LVSTNGSIIRLFDAFNGNCVQS 432
E + +++ FD ++
Sbjct: 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR 275
Query: 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD--GDHPSAVQSLQ 490
+ S + D V G G + ++AE K +D G+ ++ S++
Sbjct: 276 V----PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVR 331
Score = 58.3 bits (139), Expect = 6e-10
Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 14/202 (6%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQL--SGNKPIA-AYDPEG-LAFAIGVNSDSIKLYDV 377
++ + + V D + +I + +G P+ P G +A+A S+S+ D+
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437
+ + P ER G SPDGK + + + + L +L
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 438 NN--------NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
+ D + D V G V A
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQSWEAETYA 181
Query: 490 QFNPKYHMLASACSNMAFWIPT 511
Q + S +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFY 203
Score = 45.6 bits (106), Expect = 9e-06
Identities = 20/139 (14%), Positives = 38/139 (27%), Gaps = 4/139 (2%)
Query: 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAI 279
D + ++ D E G +D+ F+ + A
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR---IMDVFYFSTAVNPAK 252
Query: 280 HASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP 339
+ L L N ++ P S+N+S + G + +D
Sbjct: 253 TRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311
Query: 340 NNVGMIQLSGNKPIAAYDP 358
G + L GN ++
Sbjct: 312 EKKGQVDLPGNASMSLASV 330
Score = 32.9 bits (73), Expect = 0.086
Identities = 4/53 (7%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 453 QFVASGSTDGQVHIWNAERGYKVCVLD-GDHPSAVQSLQFNPKYHMLASACSN 504
++ + + ++ + + E+ V+ D P + + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK 54
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 57.6 bits (137), Expect = 1e-09
Identities = 30/305 (9%), Positives = 77/305 (25%), Gaps = 24/305 (7%)
Query: 188 AASLAHSRSSRTITKCSEN--LVRSY--------RVAKVFRENTDKINSLDYS--SDGSL 235
L++ ++ I VR V + + + ++ +S
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 236 LISCSDDDQIIIYDCEQGTSKNTINSKKYG--------VDLIKFTHSKTTAIHASTKVDA 287
L S + ++I++ N++ + I + D
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD----SFISGSYDKTVRVWDLRQPNNVG 343
++S + GH +++++ +L + + + +
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 199
Query: 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403
G+ + K+ + E
Sbjct: 200 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS 259
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
D + + IR++D CVQ + + + + S S DG
Sbjct: 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 319
Query: 464 VHIWN 468
++ +
Sbjct: 320 LNFYE 324
Score = 55.3 bits (131), Expect = 6e-09
Identities = 41/300 (13%), Positives = 83/300 (27%), Gaps = 19/300 (6%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----VDLIKFTHSKTT 277
L Y + + + + G SK + G V +KF+ K +
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKS-AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYF--------PGHVRKVSSLNLSPVDDSFISGSY-- 327
S + +K +S ++
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 328 DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS 387
D N++G + + A + + D + + AS
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 388 FKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446
+ ++G ++FSPD G+ ++ + I FD +G ++ + + A
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNP-KYHMLASACSN 504
DSQ A+ D + +W+ V D Q + + S +
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Score = 44.1 bits (102), Expect = 2e-05
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVS--SLNLSPVDDSFI-SGSYDKTVRVWDL 336
A+ DAT+R + +K V+ + +++ + + + I S S D T+ ++L
Sbjct: 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 57.2 bits (136), Expect = 1e-09
Identities = 44/318 (13%), Positives = 83/318 (26%), Gaps = 14/318 (4%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
+ + + + +L Y+ G +L+S S D + ++D ++G + V
Sbjct: 40 SINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327
+ K + D TL L V + + F+
Sbjct: 99 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158
Query: 328 DKTVRVWDLRQP----------NNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377
V + N + + ++ K + + K
Sbjct: 159 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS 218
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437
S D GE G + S +
Sbjct: 219 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 278
Query: 438 NNNASPLE-ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH 496
++ + TF + SGS + Q +I+N G V + S+ F K
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL 337
Query: 497 MLASACSNMAF-WIPTLS 513
+ A +F I S
Sbjct: 338 VAAVEKDGQSFLEILDFS 355
Score = 56.1 bits (133), Expect = 4e-09
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 1/139 (0%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
+ + +I+ +DD I +YD ++ GV +K+ H ST +
Sbjct: 20 QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVS-GSTDRTVRV 78
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
+ +V + + ++GS D T+ VW L + ++V
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Query: 350 NKPIAAYDPEGLAFAIGVN 368
+ P+ + PE + +GV
Sbjct: 139 DYPLVFHTPEENPYFVGVL 157
Score = 53.0 bits (125), Expect = 3e-08
Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
+ +V +G+ D + ++++ + L G H V +L++ +L S ++
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHG-GILVSGSTDRTV 76
Query: 508 W 508
Sbjct: 77 R 77
Score = 43.3 bits (100), Expect = 5e-05
Identities = 28/208 (13%), Positives = 63/208 (30%), Gaps = 10/208 (4%)
Query: 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEG 360
GH+ V + L D+ I+G+ DK +RV+D + + + + Y G
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG 65
Query: 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIR 420
+ + + + V KG + + K I+ + + +
Sbjct: 66 ILVS----GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480
++ + V ++ + T + FV + G V
Sbjct: 122 VWKLPKESSVPDHGE--EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 481 DHPSAVQSLQFNPKYHMLASACSNMAFW 508
D+ V + ++L+ +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYST 207
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 54.7 bits (130), Expect = 9e-09
Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
Query: 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV-ASG 458
G + ++V+ + + + D + +S + + P A PD++
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV--MPDKFGPGTAMMAPDNRTAYVLN 58
Query: 459 STDGQVHIWNAERGYKVCVLD-----GDHPSAVQSLQFNPKYHMLASACSNMAFWI 509
+ G ++ + + + G+ ++ S +P + + +
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN 114
Score = 54.7 bits (130), Expect = 1e-08
Identities = 24/330 (7%), Positives = 73/330 (22%), Gaps = 51/330 (15%)
Query: 208 VRSYRVAKVFR-ENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTIN----- 260
V S V K + + + D + + I D + + N
Sbjct: 25 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 84
Query: 261 -SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD 319
+ + + + + + + + P+
Sbjct: 85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP 144
Query: 320 D--SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377
+ + D ++ V ++ + + K A D + +
Sbjct: 145 RQVYLMRAADDGSLYVAG----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 200
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI--------------------------- 410
+S + + + +
Sbjct: 201 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 260
Query: 411 -----LVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465
+ + + +D +++ N + + F + G T +
Sbjct: 261 PKDPNQIYGVLNRLAKYDLKQRKLIKAA----NLDHTYYCVAFDKKGDKLYLGGTFNDLA 316
Query: 466 IWNAERGYKVCVLD-GDHPSAVQSLQFNPK 494
++N + KV + + + Q +
Sbjct: 317 VFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346
Score = 54.0 bits (128), Expect = 2e-08
Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 9/199 (4%)
Query: 315 LSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIA-AYDPEG-LAFAIGVNSDS 371
L + I +Y + V D+ + P P+ A+ + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 372 IKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NC 429
I D+ + + PGE G SPDGK + + N +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
++ S A P+ P ++ + DG +++ + +D +L
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY----KMDVKTGKYTVAL 179
Query: 490 QFNPKYHMLASACSNMAFW 508
SA + FW
Sbjct: 180 PLRNWNRKGYSAPDVLYFW 198
Score = 52.8 bits (125), Expect = 4e-08
Identities = 28/317 (8%), Positives = 59/317 (18%), Gaps = 77/317 (24%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
+ +I + + + + D T + +
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---------DKFGPGTAMMA------- 48
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
DN+ ++ ++ + DL N LS
Sbjct: 49 -----PDNRTA---------------------YVLNNHYGDIYGIDLDTCKNTFHANLSS 82
Query: 350 NKPIAAYDPEGLAFAIG------VNSDSIKLYDVRSYDKGP-----FASFKCPGERGCEW 398
A + + + +L D A
Sbjct: 83 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 142
Query: 399 -----TGLKFSPDGKLILVSTNGSIIRL-------------------FDAFNGNCVQSLS 434
++ + DG L + + + + S
Sbjct: 143 MPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494
+ A F D Q A+ + + G D + +PK
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK 262
Query: 495 YHMLASACSNMAFWIPT 511
N
Sbjct: 263 DPNQIYGVLNRLAKYDL 279
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 53.0 bits (125), Expect = 2e-08
Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 18/292 (6%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF 271
V K + I +L + LIS S D +I+ + ++ + +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHS-----NLIVSLDN 54
Query: 272 THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTV 331
+ ++ + + + + +++ + D + +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 332 RVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391
+ L P + + +A EG + SD +D+++ + +
Sbjct: 115 KSVRLNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171
Query: 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451
G L S R + S A +
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS-----WKPAEKGANEEEIE 226
Query: 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
VA+GS D + I++ +R K+ H V +L + L S+ +
Sbjct: 227 EDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSGA 277
Score = 47.3 bits (110), Expect = 2e-06
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 280 HASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
A+ +D + S+ K ++ H V++L + +S D ++ W+
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
Score = 45.3 bits (105), Expect = 7e-06
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337
++ ++ GH + +++L ++P ISGSYD + W
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39
Score = 39.6 bits (90), Expect = 5e-04
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485
+ ++++SG +N T P + SGS DG++ W++ ++ DH +
Sbjct: 2 HDEVLKTISG---HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ------DHSNL 48
Query: 486 VQSLQFNPKYHMLASACSNMAFW 508
+ SL + + + +
Sbjct: 49 IVSLDNSKAQEYSSISWDDTLKV 71
Score = 37.6 bits (85), Expect = 0.002
Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI- 353
+ + + +D +GS D + ++ +++P + + +
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262
Query: 354 -AAYDPEGLAFAIGVNSDSIKLYDV 377
++ + G ++ IK ++V
Sbjct: 263 NLLWETPSTLVSSGADA-CIKRWNV 286
Score = 35.7 bits (80), Expect = 0.009
Identities = 26/273 (9%), Positives = 71/273 (26%), Gaps = 10/273 (3%)
Query: 197 SRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK 256
+ I+ + + + + + +++++ I SLD S DD + +
Sbjct: 22 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGS 81
Query: 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLS 316
+ + + + ++ + L+ + V+
Sbjct: 82 QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQN--YVAVGLEE 139
Query: 317 PVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376
S + I +S ++ A + D
Sbjct: 140 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV---MGKILLYDLQSREV 196
Query: 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD-AFNGNCVQSLSG 435
S + + E + + L+ + + I ++ +++L+
Sbjct: 197 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA 256
Query: 436 VLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468
+ + S V S D + WN
Sbjct: 257 ---HKDGVNNLLWETPSTLV-SSGADACIKRWN 285
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 52.3 bits (124), Expect = 8e-08
Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 9/166 (5%)
Query: 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410
K + D L ++ I L D S K G + S G+ +
Sbjct: 23 KQLNDLDLPNLFSVTLRDAGQIALVDGDS--KKIVKVIDT----GYAVHISRMSASGRYL 76
Query: 411 LVSTNGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIW 467
LV + I + D + V + + + + ++ +G+ Q I
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 468 NAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
+ E ++ + A +I +
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 182
Score = 50.3 bits (119), Expect = 3e-07
Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 38/310 (12%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT----INSKKYGVDLIKFTHSKTT 277
++ S+ G L+ D +I + D I + V+ KF +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDR 121
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDL 336
A + + + V + P + I S++ + ++
Sbjct: 122 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 181
Query: 337 RQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396
++ V ++ + F DS Y + + + + +R
Sbjct: 182 KETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 241
Query: 397 ---------------------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435
++ + + +S G+ + + V L G
Sbjct: 242 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 301
Query: 436 ----VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA---ERGYKV-----CVLDGDHP 483
L P + D+ F V +++ + Y+V G+
Sbjct: 302 QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA 361
Query: 484 SAVQSLQFNP 493
V ++N
Sbjct: 362 KRVVQPEYNK 371
Score = 41.1 bits (95), Expect = 3e-04
Identities = 41/298 (13%), Positives = 78/298 (26%), Gaps = 29/298 (9%)
Query: 227 LDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286
D ++ D QI + D + I++ Y V + + + S + D
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGR--D 82
Query: 287 ATLRYLSLHDNKY-----VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN 341
A + + L + ++ SS D I+G+Y +
Sbjct: 83 ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 142
Query: 342 VGMIQLSGNKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399
I + + Y PE AI + S + V + G T
Sbjct: 143 PKQIVSTRGMTVDTQTYHPEPRVAAI-IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 400 ---------GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450
+ + + + N S + +L V A F
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261
Query: 451 DSQ---FVASGSTDGQVHIWNA------ERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499
+ S DG + + + +K ++ +PK L
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 319
Score = 34.2 bits (77), Expect = 0.042
Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 18/146 (12%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR-------QPNNVGMIQL 347
H + + V S + + G+ K + + Q I+
Sbjct: 252 HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 311
Query: 348 SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG----PFASFKCPGERGCEWTGLKF 403
D S S+ ++D+++ D P A + GE ++
Sbjct: 312 HPKSSHLYVDTTFNPD--ARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 369
Query: 404 SPDGKLILVS-----TNGSIIRLFDA 424
+ G + S + S + + D
Sbjct: 370 NKRGDEVWFSVWNGKNDSSALVVVDD 395
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 48.3 bits (114), Expect = 1e-06
Identities = 21/158 (13%), Positives = 48/158 (30%), Gaps = 12/158 (7%)
Query: 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD-KGPFASFKCPGERGCEWTGLKFSPDGK 408
+ + +D E L ++ I L D +Y+ K + G + S G+
Sbjct: 22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-------GYAVHISRLSASGR 74
Query: 409 LILVSTNGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDGQVH 465
+ V + + D + V + + + ++ A Q
Sbjct: 75 YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 134
Query: 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
I + E + + +++P+ + A S
Sbjct: 135 IMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 171
Score = 37.5 bits (86), Expect = 0.003
Identities = 25/229 (10%), Positives = 55/229 (24%), Gaps = 18/229 (7%)
Query: 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR--QPNNVG 343
+ + + V LS D V + DL +P V
Sbjct: 41 AGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 344 MIQLSGNK----PIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE- 397
I++ E A A + D + + S + E
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 398 -----WTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451
+ S +V+ + I L D + N +++ ++ +
Sbjct: 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE--ISAERFLHDGGLDGS 217
Query: 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500
++ + + + + K+ V D +
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVHPTF 265
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 43.3 bits (100), Expect = 4e-05
Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSY 380
+I+ S + V D+ I + N A P+G + +S+ + + D +
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 381 DKGPFASFKCPGERGCEW 398
+ +
Sbjct: 65 NVIATVPAGSSPQGVAVS 82
Score = 42.2 bits (97), Expect = 8e-05
Identities = 29/265 (10%), Positives = 63/265 (23%), Gaps = 11/265 (4%)
Query: 225 NSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST 283
S DG+ + ++ + + + I D T+ + + K +
Sbjct: 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA 94
Query: 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343
++ + + ++ +G +V + N
Sbjct: 95 SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154
Query: 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403
+ S D + A + + V + P G K
Sbjct: 155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKA 214
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDG 462
+T + D + P TPD + V + S
Sbjct: 215 YVTNVDKYFNTV----SMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFCN 266
Query: 463 QVHIWNAERGYKVCVLD-GDHPSAV 486
V + + + G +P A
Sbjct: 267 TVSVIDTATNTITATMAVGKNPYAS 291
Score = 32.9 bits (73), Expect = 0.072
Identities = 6/38 (15%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 224 INSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTIN 260
+ + DG + ++ S + + + D T T+
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 38.3 bits (87), Expect = 0.002
Identities = 18/193 (9%), Positives = 42/193 (21%), Gaps = 50/193 (25%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+I+ + + VW+L + + Q+ + +
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVD----VPGQVQPMV------------------- 43
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNN 440
SPD + + V + + + + +
Sbjct: 44 ---------------------VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 82
Query: 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD-----GDHPSAVQSLQFNPKY 495
S + QFV GS + + D + N
Sbjct: 83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTL 142
Query: 496 HMLASACSNMAFW 508
+ A + +
Sbjct: 143 WVPALKQDRICLF 155
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 37.6 bits (87), Expect = 0.003
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 36/151 (23%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
+ G+ + D Q+ K+ + + +V+
Sbjct: 319 FDGRGNAYTTLFIDSQVC-----------------------KWNIADAIKHYNGDRVNYI 355
Query: 289 LRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISG---SYDKTVRVWDLRQPNNVGMI 345
+ L + Y PGH + + + S D+ + V L P N +I
Sbjct: 356 RQKLDVQ------YQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPL-HPENDQLI 408
Query: 346 QLSGNKPIAAYDPEGLA---FAIGVNSDSIK 373
+SG + +D A I V D IK
Sbjct: 409 DISGEEMKLVHDGPTYAEPHDCILVRRDQIK 439
Score = 37.6 bits (87), Expect = 0.004
Identities = 35/244 (14%), Positives = 76/244 (31%), Gaps = 40/244 (16%)
Query: 223 KINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTHSKTTAI 279
+++ D G +C + ++ + ++ + + + +K + KT
Sbjct: 177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD 236
Query: 280 HASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQ 338
VD ++++ RY P + LN SP +G TV V + +
Sbjct: 237 SKVPVVDGR------GESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289
Query: 339 PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398
+++ ++ I A GL G + RG +
Sbjct: 290 LDDLFEDKIELRDTIVAEPELGL----GPLHTTFD-------------------GRGNAY 326
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN---NASPLEATFTPDSQFV 455
T L + I+ ++ N ++ V N + L + D +++
Sbjct: 327 TTLFID---SQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWL 383
Query: 456 ASGS 459
S
Sbjct: 384 VVLS 387
Score = 36.8 bits (85), Expect = 0.005
Identities = 26/218 (11%), Positives = 57/218 (26%), Gaps = 48/218 (22%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIK-LYDVRSY 380
F SG + VRV + + I ++ + A G+ ++S + L + Y
Sbjct: 14 FWSGGHQGEVRVLGVPSMREL--------MRIPVFNVDS-ATGWGITNESKEILGGDQQY 64
Query: 381 DKG----PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSG 435
G P S DGK + ++ + + +
Sbjct: 65 LNGDCHHPHISM------------TDGRYDGKYLFINDKANTRVARIRLDIMKTDKITH- 111
Query: 436 VLNNNASPLEATFTPD--SQFVASGSTDG-----QVHIWNAERGY-KVCVLDGDH----- 482
+ N + + +V + ++ + Y +D +
Sbjct: 112 -IPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAW 170
Query: 483 ----PSAVQSLQFNP--KYHMLASACSNMAFWIPTLSA 514
+ + + KY S A +
Sbjct: 171 QVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMR 208
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 36.5 bits (83), Expect = 0.007
Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 11/123 (8%)
Query: 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-- 458
K+ D + I G++ L++ + G + + +PD ++
Sbjct: 22 AKWISDTEFIYREQKGTVR-LWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYN 80
Query: 459 -------STDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNPKYHMLASACSNMAFWIP 510
S G + G + + + +Q + PK L N ++
Sbjct: 81 VEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140
Query: 511 TLS 513
+
Sbjct: 141 HVG 143
Score = 26.5 bits (57), Expect = 8.3
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Query: 353 IAAYDPE-GLAFAIGVNSDSIK--LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKL 409
I AYD + + + + LY + C C + FS
Sbjct: 364 ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423
Query: 410 ILVSTNGS---IIRLFDAFNGNCVQSL 433
L+ G ++ + + + + L
Sbjct: 424 FLLKCEGPGVPMVTVHNTTDKKKMFDL 450
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme,
N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 313
Score = 34.9 bits (80), Expect = 0.017
Identities = 24/118 (20%), Positives = 40/118 (33%), Gaps = 8/118 (6%)
Query: 320 DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379
F S +RV+D + + G K A + A + V+ S
Sbjct: 168 SLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD------GS 221
Query: 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437
+ S R T L + PDG+L +V+ +F +G V++ G
Sbjct: 222 VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERVEAPQGNH 277
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 33.5 bits (75), Expect = 0.063
Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 5/116 (4%)
Query: 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427
++I +++ + F E G SPDG+ IL+ N
Sbjct: 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93
Query: 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP 483
+ L N + P++ + S G + V +
Sbjct: 94 YDIYDL-----NKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144
Score = 32.4 bits (72), Expect = 0.12
Identities = 22/182 (12%), Positives = 47/182 (25%), Gaps = 14/182 (7%)
Query: 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329
++ S+ L + + L I + +
Sbjct: 283 NYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342
Query: 330 TVRVWDLRQPNNVGMIQLSGNKP---IAAYDPEGLAFAIGVNSDSIK---LYDVRSYDKG 383
+ + G I A + L + LY ++ D
Sbjct: 343 YRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYT 402
Query: 384 PFASFKCP-GERGCEWTGLKFSPDGKLILVSTNGS---IIRLFDAFNGNCVQSLSGVLNN 439
C C++ + FS + K + +G + L + N ++ VL +
Sbjct: 403 KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR----VLED 458
Query: 440 NA 441
N+
Sbjct: 459 NS 460
Score = 28.2 bits (61), Expect = 2.6
Identities = 32/279 (11%), Positives = 81/279 (29%), Gaps = 41/279 (14%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-----NTINSKKYGVDLIKFTHSKTT 277
K+ SL + SD L ++ I++++ E G S +T + + ++ +
Sbjct: 18 KLYSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF 75
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337
+ + ++ + Y Y + R++ + P + +++ S +
Sbjct: 76 ILLEY---NYVKQWRHSYTASYDIY-DLNKRQLITEERIPNNTQWVTWSPVGHKLAY--V 129
Query: 338 QPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397
N++ + +D + +V S +
Sbjct: 130 WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW------------ 177
Query: 398 WTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456
+SP+G L N + + L + + + T
Sbjct: 178 -----WSPNGTFLAYAQFNDTEVPLIEYSFYSD----------ESLQYPKTVRVPYPKAG 222
Query: 457 SGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKY 495
+ + + + N + V +A S+ Y
Sbjct: 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY 261
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 32.4 bits (73), Expect = 0.12
Identities = 15/110 (13%), Positives = 36/110 (32%), Gaps = 9/110 (8%)
Query: 400 GLKFSPDGKLILVS-TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458
G+ SPDGK + ++ I +++ + N + VL+ + + P + + G
Sbjct: 210 GINISPDGKYVYIAELLAHKIHVYE-KHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG 268
Query: 459 STDGQVHIWNAERGYKVCV-------LDGDHPSAVQSLQFNPKYHMLASA 501
+ I+ + + + P N ++
Sbjct: 269 CHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTV 318
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 32.0 bits (71), Expect = 0.13
Identities = 27/233 (11%), Positives = 46/233 (19%), Gaps = 27/233 (11%)
Query: 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS 255
R + + +L + T + + D +II
Sbjct: 59 VMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPF 118
Query: 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315
+ + D I F D +
Sbjct: 119 SSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIE 178
Query: 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLY 375
V + + + G I + D +G D K
Sbjct: 179 VNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDG--------KDLRKHT 230
Query: 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428
Y + DG+ IL S GS I +F+
Sbjct: 231 SFTDYY------------------PRHLNTDGRRILFSKGGS-IYIFNPDTEK 264
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 31.8 bits (70), Expect = 0.15
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 139 ENMCNLTKLDLPYNKLGSWDFELLHSLSSLES 170
LD+ ++ S L +L L +
Sbjct: 198 HGASGPVILDISRTRIHSLPSYGLENLKKLRA 229
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 29.6 bits (65), Expect = 0.76
Identities = 15/116 (12%), Positives = 30/116 (25%), Gaps = 5/116 (4%)
Query: 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459
L +PDG + + + I +G + FT + VA+G
Sbjct: 32 NLASAPDGTIFVTNHEVGEIVSITP-DG----NQQIHATVEGKVSGLAFTSNGDLVATGW 86
Query: 460 TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLSAD 515
+ + + + P A+ P + I +
Sbjct: 87 NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 142
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 28.1 bits (61), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 139 ENMCNLTKLDLPYNKLGSWDFELLHSLSSLES 170
N+ L +LD+ NK+ D +L L++LES
Sbjct: 169 ANLTTLERLDISSNKVS--DISVLAKLTNLES 198
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 28.4 bits (61), Expect = 2.1
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 92 NISSLEI--KRIDTEEIVLNPSCLIKLKEIK---CMLAQKAVPKILKIVAKSENMCNLTK 146
+I SL+I + + L + + ++ C L + I + L +
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALR---VNPALAE 59
Query: 147 LDLPYNKLGSWDFELLHSLSSLESPHFVSL 176
L+L N+LG + S L
Sbjct: 60 LNLRSNELGDVGVHCVLQGLQTPSCKIQKL 89
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 28.3 bits (61), Expect = 2.7
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSL 168
K++ L +L +N L EL +L L
Sbjct: 295 KLIELPALPPRLERLIASFNHLAEVP-ELPQNLKQL 329
Score = 26.7 bits (57), Expect = 7.5
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 138 SENMCNLTKLDLPYNKLGSWDFELLHSLSSL 168
E NL +L + YN L + ++ S+ L
Sbjct: 320 PELPQNLKQLHVEYNPLREFP-DIPESVEDL 349
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 27.8 bits (60), Expect = 2.7
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 469 AERGYKVCVLDGDHPSAVQSLQFNPKYH 496
A+ G+ V ++D D A L +
Sbjct: 27 AQLGHDVTIVDADITMANLELILGMEGL 54
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 28.1 bits (61), Expect = 2.8
Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 5/192 (2%)
Query: 143 NLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITK 202
+ LDL NK+ +L +L +L + + A +
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLH-----TLILINNKISKISPGAFAPLVKLERLYL 86
Query: 203 CSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK 262
L + + S+ + + + +S +
Sbjct: 87 SKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146
Query: 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322
+ L + T + +L L L NK + ++ +++L + +
Sbjct: 147 QGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 323 ISGSYDKTVRVW 334
IS + ++
Sbjct: 207 ISAVDNGSLANT 218
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 27.7 bits (60), Expect = 3.2
Identities = 16/124 (12%), Positives = 31/124 (25%), Gaps = 13/124 (10%)
Query: 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447
F P +G+ + +I+ TN I++FD G ++
Sbjct: 22 FTEP-------SGVAVNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKRDSQL---- 69
Query: 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
P+ V S D V + ++ G +
Sbjct: 70 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVR-KFGATILQHPRGVTVDNKGRII 128
Query: 508 WIPT 511
+
Sbjct: 129 VVEC 132
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 27.5 bits (59), Expect = 3.3
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 394 RGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNGNCVQSLSGVLNNNASP 443
+P+G +++ S++ GS++ L +G L P
Sbjct: 212 STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFP 263
>d1zsoa1 b.166.1.1 (A:1-156) Hypothetical protein MAL13P1.257
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 156
Score = 27.0 bits (60), Expect = 3.7
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 384 PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423
FASF+C RG E F P I+ T G + +
Sbjct: 95 DFASFEC---RGIELI--DFFPSNNFIVEDTKGKLYYDVN 129
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 27.4 bits (59), Expect = 3.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 469 AERGYKVCVLDGDHPSAVQSLQFN 492
+RG KV +DGD A SL
Sbjct: 28 GDRGRKVLAVDGDLTMANLSLVLG 51
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 26.6 bits (57), Expect = 7.1
Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 8/177 (4%)
Query: 143 NLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITK 202
+ T L L N L ++ L + L + +T + T+ L S +
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTL-PVLGTLDLSHNQLQ 90
Query: 203 CSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK 262
L ++ V + +++ SL + L + ++ + E T + +
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGA----LRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 263 KYGVDLIKFTHSKTTAIHASTKVDAT-LRYLSLHDNKYVRYFPG--HVRKVSSLNLS 316
++ + ++ T + A L L L +N G + L
Sbjct: 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLH 203
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 26.1 bits (56), Expect = 9.5
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 140 NMCNLTKLDLPYNKLGSWD-FELLHSLSSLE 169
+ L L L N + L +L LE
Sbjct: 176 GLTKLQNLYLSKNHISDLRALAGLKNLDVLE 206
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 26.4 bits (56), Expect = 9.8
Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 92 NISSLEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKILKIVAKSENMCNLTKLDLPY 151
+S+ + L L L+ + AV + ++ + M +L L+L
Sbjct: 254 LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE--KMPDLLFLELNG 311
Query: 152 NKLGSWDFELLHSLSSL 168
N+ + +++ + +
Sbjct: 312 NRFSE-EDDVVDEIREV 327
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 26.3 bits (58), Expect = 9.8
Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 15/149 (10%)
Query: 326 SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-LAFAIGVNSD-SIKLYDVRSYDKG 383
+Y D + + +SGN D EG AF+ NS+ + L ++ + +
Sbjct: 170 NYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD 229
Query: 384 PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443
F K G ++ +++ D + N +P
Sbjct: 230 HIVVFNIAE-------IEKAIAAGDYQELNG----VKVVDGRKEASSLFTRYIPIAN-NP 277
Query: 444 LEATFTPDSQF-VASGSTDGQVHIWNAER 471
PD + +G V + + R
Sbjct: 278 HGCNMAPDKKHLCVAGKLSPTVTVLDVTR 306
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 26.3 bits (56), Expect = 9.9
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 140 NMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHF 173
++ NLT L L N++ S L SL+
Sbjct: 151 DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.386
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,806,608
Number of extensions: 82324
Number of successful extensions: 582
Number of sequences better than 10.0: 1
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 168
Length of query: 515
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 426
Effective length of database: 1,185,626
Effective search space: 505076676
Effective search space used: 505076676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)