Psyllid ID: psy612
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1005 | 2.2.26 [Sep-21-2011] | |||||||
| P40872 | 4262 | Polyketide synthase PksM | yes | N/A | 0.948 | 0.223 | 0.418 | 0.0 | |
| O31782 | 5488 | Polyketide synthase PksN | no | N/A | 0.894 | 0.163 | 0.329 | 1e-152 | |
| Q05470 | 4538 | Polyketide synthase PksL | no | N/A | 0.878 | 0.194 | 0.328 | 1e-135 | |
| P40806 | 5043 | Polyketide synthase PksJ | no | N/A | 0.668 | 0.133 | 0.350 | 1e-123 | |
| O31784 | 2543 | Polyketide synthase PksR | no | N/A | 0.617 | 0.244 | 0.312 | 8e-99 | |
| Q9R9J1 | 3971 | Mycosubtilin synthase sub | no | N/A | 0.590 | 0.149 | 0.337 | 7e-98 | |
| Q10977 | 1876 | Phthiocerol synthesis pol | yes | N/A | 0.503 | 0.269 | 0.342 | 4e-94 | |
| Q7TXM0 | 1876 | Phthiocerol/phenolphthioc | yes | N/A | 0.503 | 0.269 | 0.341 | 2e-93 | |
| Q7TXL9 | 1538 | Phthiocerol/phenolphthioc | no | N/A | 0.515 | 0.336 | 0.332 | 8e-90 | |
| Q10978 | 1538 | Phthiocerol synthesis pol | no | N/A | 0.515 | 0.336 | 0.332 | 9e-90 |
| >sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4 | Back alignment and function desciption |
|---|
Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats.
Identities = 423/1010 (41%), Positives = 628/1010 (62%), Gaps = 57/1010 (5%)
Query: 1 MPETQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDF 60
+P T+++ +F + ++ +W ++ ELQ +++Y +L RY +I+ ++
Sbjct: 3081 LPHTKVTGIF-QPAEQGSMDDWTRKVWAELQASTEQTVLY--QNLKRYVNHIEQTTIQP- 3136
Query: 61 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN--- 117
NS +K GGTYLITGG G LG LF+ +L Y+ NLIL+GRS N K++K+ +
Sbjct: 3137 DNSKLKSGGTYLITGGVGGLGYLFAKHLAKNYAANLILTGRSPFNDEKQKQIKELKDLGG 3196
Query: 118 KAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSK 177
+A+Y + DVSD + M + + G I+GV+H AGI S I + ++F ++ K
Sbjct: 3197 EAMYAEADVSDPIAMGDCVKRGKDRFGAINGVIHAAGIES-DSAIFDKKIESFQRIIEPK 3255
Query: 178 ISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNN 237
I+GTIAL+ L+N LDF+CYFSSSSA+LGDFG CDYA+GNRFQ YA+Y N
Sbjct: 3256 INGTIALDEWLKN-------EDLDFMCYFSSSSAVLGDFGCCDYAIGNRFQMAYAQYRN- 3307
Query: 238 KNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297
+ + K INWP+W + KIG+ E TD Y KSS Q+ L +G+++FE +L Q
Sbjct: 3308 ----ELHNGKTFVINWPVWKDGGMKIGDEETTDMYLKSSGQRFLEAEEGIRMFEHILAQQ 3363
Query: 298 KIQYLVLSGELEKLNQIIN----------NIAPKVSENK-KINNFNIEKFIENDIKNHIC 346
Q+LV++G+ ++++ + AP ENK ++ +IEK +E+D+K HI
Sbjct: 3364 DAQHLVIAGQPSRVSRFLGMTEPAIPEPATQAPLAQENKDEVKTLSIEKRLEHDLKEHIH 3423
Query: 347 NILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFI 406
+L K ++ NKN AD+GFDSI LA+FS +LSK +++++ P++FF YSTL+ LI++F+
Sbjct: 3424 TLLKISKDKLNLNKNWADFGFDSIYLAKFSNVLSKHFNIEVTPALFFGYSTLQELISFFL 3483
Query: 407 KNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIA 466
+H + FYR+ +E++ Y SKKS ++ +E IA
Sbjct: 3484 TDHKELIEAFYRDD---ASEAQKPPEAYAVIPVALEPEASKKSIRQVH-------DEPIA 3533
Query: 467 IIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSI 526
IIGMSGRFP A +++E W L N K IS+IP + DW +P K+ +W +
Sbjct: 3534 IIGMSGRFPQADSVHELWDNLKNGKSCISDIPGERRDWGRANRDPEKAV----PRWGAFL 3589
Query: 527 PGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEG 586
ID FDPLFF+ISP EAE MDPRQR L+E+W EDAGY ++I + G++VGVEEG
Sbjct: 3590 KDIDRFDPLFFQISPKEAESMDPRQRIFLEEAWHTFEDAGYMGDRIKGKSCGVYVGVEEG 3649
Query: 587 SNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHEC 646
D + T NA LSAR+AY +DLKGP MA+ ACSS LVA H AC +LRQ +C
Sbjct: 3650 EYAHLTGDTDYINGTQNATLSARIAYALDLKGPNMALTAACSSGLVAIHQACSALRQGDC 3709
Query: 647 DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706
+ A++ GV+L IS ++ A+T A MLSP+G+C VFD+ ANGLVP EAV AV+LK LS+A+
Sbjct: 3710 EMALAGGVSLNISHMSFEALTRAEMLSPNGQCKVFDQDANGLVPGEAVAAVLLKPLSKAI 3769
Query: 707 SDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGT 766
D D I+ I+ SG+NYDGKTNGITAPN SQ ELI+++Y+K+ +NP DI Y++ H TG+
Sbjct: 3770 EDKDHIYGCIKASGVNYDGKTNGITAPNPFSQAELIENIYEKNEINPLDIQYVMAHSTGS 3829
Query: 767 KLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPA 826
LGDP+E+ AL VF T ++FC I+S K IGHTFAASG V+LI+++ ++K +IIPA
Sbjct: 3830 NLGDPLEVQALTSVFSKYTKQKQFCMISSIKPLIGHTFAASGTVALISMLMAMKNQIIPA 3889
Query: 827 SLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTN 886
+ HCE EN YI K SPF + K N+ W N+K R+G +S G+SGTNAH V++EYI +
Sbjct: 3890 THHCESENPYIPFKESPFVLCKENRSWIKKNQKPRMGTISTTGISGTNAHAVIEEYIPDD 3949
Query: 887 FKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHH 946
+ + + +P + V+SA+ L++ +++ +L +N+ + + + YTL GR
Sbjct: 3950 QPSTQRH---QGSP-QIFVISAQNDDRLQDAACRMIAYLEQNHNLSLPDVAYTLQVGRKA 4005
Query: 947 FQYRCAIIISSIEEVVKII--------NDTLNSKEKILHTNYLKGIVSHK 988
+ R AI+ ++ E++V+ + N ++ +++ L+T Y +GI+ +
Sbjct: 4006 MEARLAIVANNQEQLVRKLKEYVEAMKNGGVSGQQRSLYTGYTEGILEEQ 4055
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 | Back alignment and function description |
|---|
Score = 538 bits (1387), Expect = e-152, Method: Composition-based stats.
Identities = 319/968 (32%), Positives = 524/968 (54%), Gaps = 69/968 (7%)
Query: 41 YGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTN-LILS 99
Y NDL Q++ + I + + G YLITGG G LG +F+ + + LIL+
Sbjct: 3658 YINDLDEMQIDDREISMP------WRDKGVYLITGGAGGLGFIFAKEIARQAEQPVLILT 3711
Query: 100 GRSKLNS---IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS 156
GRS LN+ +L++ +A Y QVDV+ I SI ++ ++GV+H AG+
Sbjct: 3712 GRSALNADQQAELNELQQLGARAEYRQVDVTQTEAASELITSITSDYEDLNGVIHSAGL- 3770
Query: 157 GLTSN-ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 215
+ N ++ + VL+ K+ G + ++ A E+ LDF FSS S++ G
Sbjct: 3771 -IKDNYLMSKTNEELTQVLAPKVKGLVNVDEATEHL-------ALDFFILFSSISSVAGS 3822
Query: 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS 275
G DYAM N F YA Y N + ++INWPLW + N E + K+
Sbjct: 3823 AGQADYAMANAFMDSYAAYRNALVTAMYRHGQTLSINWPLWKEGGMR-ANKEIENMTLKN 3881
Query: 276 SKQKVLHENDGLKLFEQLLIQDKIQYLVLSG----ELEKLNQI-------INNIAPKVSE 324
+ + G++ + L K Q +V+ G EKL Q + + +V+
Sbjct: 3882 TGVTPMRTETGIQALYKGLAFGKDQVIVMEGFKDMMREKLTQKPSSDDVPMKTVQVRVTS 3941
Query: 325 NKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS 384
+++ N+ I+ +K I +L K EI + YGFDSI+L EF+ L++
Sbjct: 3942 EARMDQGNMFDHIQEVLKQTISQLLKIKPEEIDPDMEFNQYGFDSITLTEFANTLNEKCK 4001
Query: 385 LDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYEN 444
LD+ P++FF ++T+ Y + Y N + +T +K ++ + +N +N
Sbjct: 4002 LDLTPTVFFEHATVYAFAGYLSEE--------YPNAFTAQTPAKAEVLM--QPVEQNIKN 4051
Query: 445 V--SKKSNFILNKNTDINSE-----ELIAIIGMSGRFPAARNINEFWKILINNKDVISEI 497
+ S ++ F+ T + E E IAI+GMSG FP A+++ E+WK L + D I+E+
Sbjct: 4052 MTFSTENRFVKPSVTPMQKEADHKPEPIAIVGMSGVFPKAKDVEEYWKNLSSGADCITEV 4111
Query: 498 PEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQE 557
P+ +DW+ YY +P+K +NK N KW G I + +FDPLFF ISPLEAE+M+P+QR L+
Sbjct: 4112 PKDRWDWQEYYGDPLKEANKTNVKWGGFIDEVADFDPLFFGISPLEAEQMEPQQRLLMTY 4171
Query: 558 SWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA-----RLAY 612
+W A+E+AG+ +A K G+F+G + Y L V++ + A +S R++Y
Sbjct: 4172 AWKAVEEAGHSARSLAGTKTGIFIGTGN-TGYSSLLSNVDIEGSAAANMSPSAGPNRVSY 4230
Query: 613 FMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGML 672
F+++ GP I+TACSSSLVA H A ++ C+ AI+ GVN +++P+ +IA AG L
Sbjct: 4231 FLNIHGPSEPIDTACSSSLVAIHHAVCAIENGNCEMAIAGGVNTVVTPQGHIAYDKAGAL 4290
Query: 673 SPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITA 732
S +G+C F ++A+G SE + LK+L+ A DGD I+ +I+GS +N+ G+ N +T
Sbjct: 4291 SKEGRCKTFSDKADGFAVSEGAGILFLKKLTAAERDGDHIYGVIKGSAVNHGGRANSLTT 4350
Query: 733 PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK-------NKT 785
PN +Q +++K+ Y+K+ ++P + YI HGTGT+LGDPVEIN L FK +
Sbjct: 4351 PNPKAQADVVKTAYEKAGIDPRTVTYIEAHGTGTELGDPVEINGLKAAFKELYEKTGDPA 4410
Query: 786 YNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845
+ C + S K+NIGH A+G+ +I ++ +K+K + SL+ E N YI L +SPFY
Sbjct: 4411 VHGSHCGLGSAKTNIGHLSLAAGVAGVIKVLLQLKHKTLVKSLYSETVNPYIRLDDSPFY 4470
Query: 846 INKSNKKWNTVNEKL-----RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNP 900
I + +++W + ++ R +S+FG+ G NAH+V++EYI + +++
Sbjct: 4471 IVQESREWQALRDEAGRELPRRAGISSFGIGGVNAHVVIEEYIPKETTHPATAPAVTAQH 4530
Query: 901 YHMVVLSAKTKISLKEKMKQILLFLRKNNTVC--IENFVYTLMQGRHHFQYRCAIIISSI 958
+ +LSAK + LK++ +Q+ F+ K + + + YTL +GR + R II S
Sbjct: 4531 PGIFILSAKDEDRLKDQARQLADFISKRSITARDLTDIAYTLQEGRDAMEERLGIIAVST 4590
Query: 959 EEVVKIIN 966
++++ +N
Sbjct: 4591 GDLLEKLN 4598
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3 | Back alignment and function description |
|---|
Score = 482 bits (1240), Expect = e-135, Method: Composition-based stats.
Identities = 316/963 (32%), Positives = 500/963 (51%), Gaps = 80/963 (8%)
Query: 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTN---LILSGRSKLNSIIYKKLKKFNN---KA 119
K G YLITGG G LG +F+ + N+ TN +IL+GRS L+ KKLK +A
Sbjct: 1518 KDKGVYLITGGAGGLGFIFATEIANQ--TNDAVVILTGRSPLDERKKKKLKALQKLGIQA 1575
Query: 120 IYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSN-ILEANYKNFYSVLSSKI 178
IY Q D++DK + + + N G +DG++H AG+ + N I++ + +VL+ K+
Sbjct: 1576 IYRQADLADKQTVDALLKETQNVYGDLDGIIHSAGL--IKDNFIMKKKKEEVQTVLAPKV 1633
Query: 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 238
+G I L+ A ++ LDF FSS + +G G DYAM N F +++Y N +
Sbjct: 1634 AGLIHLDEATKDI-------PLDFFILFSSGAGAVGSAGQADYAMANAFMNAFSEYRNGQ 1686
Query: 239 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHEND-GLKLFEQLLIQD 297
K K +++ WPLW + +I + +T K V E D G++
Sbjct: 1687 AELHKRYGKTLSVCWPLWKDGGMQI--DAETARMLKRETGMVAMETDRGIQALYHGWTSG 1744
Query: 298 KIQYLVLSGELEKLNQII------------------NNIAPKVSENKKINNFNIEKFIEN 339
K Q LV SG +++ + N A K +I+ + + EN
Sbjct: 1745 KPQVLVASGVTDRIRAFLHETGHGKGQSHNIKKSSLNQEAEKADMIGEIDEEILREKAEN 1804
Query: 340 DIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLE 399
K + +++ +I L DYG DSI + + L K + + ++FF Y +
Sbjct: 1805 YFKQVLSSVIKLPAGQIDAEAPLEDYGIDSIMIMHVTGQLEKVFG-SLSKTLFFEYQDIR 1863
Query: 400 RLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKI-NENYENVSKKSNFI-----L 453
L YFI + ++ L E+ S+ ++ + + +KS F+
Sbjct: 1864 SLTRYFIDSRREKLLDI------LGFETGKPSVERKSEPEKQEIPVIPRKSGFLPLQDKE 1917
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIK 513
K E IAIIG+SGR+P A NI+E W+ L + +D I+EIP +D LYY+
Sbjct: 1918 QKQVREKETEEIAIIGISGRYPQADNIDELWEKLRDGRDCITEIPADRWDHSLYYDEDKD 1977
Query: 514 SSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIA 573
K SKW G + +D+FDP FF ISP EA+ MDP++R LQ + +EDAGY +
Sbjct: 1978 KPGKTYSKWGGFMKDVDKFDPQFFHISPREAKLMDPQERLFLQCVYETMEDAGYTREHLG 2037
Query: 574 NQKIGMFVGV---------EE----GSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPV 620
++ G EE G+ Q R + LT ++I + R++Y+ D GP
Sbjct: 2038 RKRDAELGGSVGVYVGVMYEEYQLYGAQEQVRGRSLALTGNPSSI-ANRVSYYFDFHGPS 2096
Query: 621 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYV 680
+A++T CSSSL A H+ACQSL++ EC+ A + GVN+ I P Y+ + +S G+C
Sbjct: 2097 IALDTMCSSSLTAIHLACQSLQRGECEAAFAGGVNVSIHPNKYLMLGQNKFMSSKGRCES 2156
Query: 681 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTE 740
F + +G VP E V AV+LK LS+A+ DGD I+ II+G+ IN+ GKTNG + PN +Q +
Sbjct: 2157 FGQGGDGYVPGEGVGAVLLKPLSKAVEDGDHIYGIIKGTAINHGGKTNGYSVPNPNAQAD 2216
Query: 741 LIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNI 800
+IK + ++ ++P ++YI HGTGT LGDP+EI L VF +T +++FCAI S KSNI
Sbjct: 2217 VIKKAFVEAKVDPRTVSYIEAHGTGTSLGDPIEITGLSKVFTQETDDKQFCAIGSAKSNI 2276
Query: 801 GHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN----TV 856
GH +A+G+ + ++ +KY+ + SLH N I NSPF + + ++W +V
Sbjct: 2277 GHCESAAGIAGVTKVLLQMKYRQLAPSLHSNVLNPNIDFLNSPFKVQQELEEWKRPIISV 2336
Query: 857 N----EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKI 912
N E RI VS+FG G NAHI+++EY + ++ P ++VLSAK +
Sbjct: 2337 NGKDIELPRIAGVSSFGAGGVNAHILIEEYAP---EPVEERLPARKQP-AVIVLSAKNEE 2392
Query: 913 SLKEKMKQILLFLRKNNTV--CIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLN 970
L+++ +++L +R+ V + YTL GR + R A + +++E+ + + + ++
Sbjct: 2393 RLQKRAERLLHAIREQTYVEADLHRIAYTLQVGREAMKERLAFVAETMQELEEKLYECIS 2452
Query: 971 SKE 973
E
Sbjct: 2453 GTE 2455
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3 | Back alignment and function description |
|---|
Score = 442 bits (1138), Expect = e-123, Method: Composition-based stats.
Identities = 250/713 (35%), Positives = 399/713 (55%), Gaps = 41/713 (5%)
Query: 289 LFEQLLIQDKIQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNI 348
FE +Q +Y+V + + E N A ++++ N + +E + N + I
Sbjct: 3171 FFEYGSVQSLAEYVVAAYQGE-----WNQDATAKGKDERTNLVHSLSSLEASLSNMVSAI 3225
Query: 349 LNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408
L +I N L++YGFDS++ F+ +++ + L++ P+IFF Y +L L Y
Sbjct: 3226 LKVNSEDIDVNTELSEYGFDSVTFTVFTNKINEEFQLELTPTIFFEYGSLHSLAEYLTVE 3285
Query: 409 HNNTMIKFYRN---KYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELI 465
H +T+++ + L+T+S + + + + K+ + D E +
Sbjct: 3286 HGDTLVQEREKPEGQEELQTKSSEAPKITSRRKRRFTQPIIAKAERNKKQAADF---EPV 3342
Query: 466 AIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGS 525
AI+G+SGRFP A +I+EFWK L KD I+E+P+ +DW+ +Y NP NK + KW G
Sbjct: 3343 AIVGISGRFPGAMDIDEFWKNLEEGKDSITEVPKDRWDWREHYGNPDTDVNKTDIKWGGF 3402
Query: 526 IPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEE 585
I G+ EFDPLFF ISP EA+ +DP+QR L+ W ALEDAG P ++ G+F+G
Sbjct: 3403 IDGVAEFDPLFFGISPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSGTGTGIFIGTGN 3462
Query: 586 GSNYQDRLDQVNL-----TSTHNAILSA---RLAYFMDLKGPVMAINTACSSSLVATHIA 637
+ Y+D + NL +T + I S R++YF+++ GP + TACSSSLVA H A
Sbjct: 3463 -TGYKDLFHRANLPIEGHAATGHMIPSVGPNRMSYFLNIHGPSEPVETACSSSLVAIHRA 3521
Query: 638 CQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 697
+++ +C+ AI+ GVN +++ EA+I+ + AGMLS DG+C F ANG V E V V
Sbjct: 3522 VTAMQNGDCEMAIAGGVNTILTEEAHISYSKAGMLSTDGRCKTFSADANGYVRGEGVGMV 3581
Query: 698 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 757
+LK+L A DG+ I+ +IRG+ N+ G+ N +T+PN +Q +L+ Y++++++P +
Sbjct: 3582 MLKKLEDAERDGNHIYGVIRGTAENHGGRANTLTSPNPKAQADLLVRAYRQADIDPSTVT 3641
Query: 758 YIITHGTGTKLGDPVEINALHDVFKNKTYNQ---------KFCAITSNKSNIGHTFAASG 808
YI HGTGT+LGDP+EIN L FK + + C I S KSNIGH A+G
Sbjct: 3642 YIEAHGTGTELGDPIEINGLKAAFKELSNMRGESQPDVPDHRCGIGSVKSNIGHLELAAG 3701
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV-----NEKLRIG 863
+ LI ++ +K+K + SLHCE N Y+ L +SPFYI + ++W +V NE R
Sbjct: 3702 ISGLIKVLLQMKHKTLVKSLHCETLNPYLQLTDSPFYIVQEKQEWKSVTDRDGNELPRRA 3761
Query: 864 AVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILL 923
+S+FG+ G NAHIV++EY+ N+ ++ +++VLSAK K L ++ Q+L
Sbjct: 3762 GISSFGIGGVNAHIVIEEYMPK-----ANSEHTATEQPNVIVLSAKNKSRLIDRASQLLE 3816
Query: 924 FLR--KNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEK 974
+R K + YTL GR R A + +++E+ + + ++ KE+
Sbjct: 3817 VIRNKKYTDQDLHRIAYTLQVGREEMDERLACVAGTMQELEEKLQAFVDGKEE 3869
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O31784|PKSR_BACSU Polyketide synthase PksR OS=Bacillus subtilis (strain 168) GN=pksR PE=1 SV=2 | Back alignment and function description |
|---|
Score = 362 bits (929), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 349/662 (52%), Gaps = 41/662 (6%)
Query: 324 ENKKINNFNIEKFIENDIKNHIC-NILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKF 382
+NK I N++ I + + + + N+ + K I K ++ D+G DS L +R +
Sbjct: 1400 QNKAIKASNLKARIRSYVTDKLAVNMADPSKLSIAK-AHIMDFGIDSSQLVALTREMEAE 1458
Query: 383 YSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENY 442
+++ P++FF Y T++ LI +F H + + + + + E + I K Y
Sbjct: 1459 TKIELNPTLFFEYPTIQELIDFFADKHEASFAQLFGEAH--QQEERPAQIENQMKQIPAY 1516
Query: 443 ENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIF 502
E + K T ++ + IAIIGMSG+FP A ++ EFW L+ K+ +SE+P++ +
Sbjct: 1517 ETNTDK--------TIEHAADGIAIIGMSGQFPKANSVTEFWDNLVQGKNCVSEVPKERW 1568
Query: 503 DWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLAL 562
DW+ Y + + + +W G I GI EFDPLFF ISP EA MDP++ LL +W A+
Sbjct: 1569 DWRKYAAADKEGQSSL--QWGGFIEGIGEFDPLFFGISPKEAANMDPQEFLLLIHAWKAM 1626
Query: 563 EDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMA 622
EDAG ++++ G+FV T+ +++ R++Y +D+KGP
Sbjct: 1627 EDAGLTGQVLSSRPTGVFVAAGNTD-----------TAVVPSLIPNRISYALDVKGPSEY 1675
Query: 623 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFD 682
ACSS+LVA H A QS+R EC+ AI VNL++SP+ +I S G LS G+ F
Sbjct: 1676 YEAACSSALVALHRAIQSIRNGECEQAIVGAVNLLLSPKGFIGFDSMGYLSEKGQAKSFQ 1735
Query: 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELI 742
ANG V SE +++K L +A+ D D I+++I+GSG+++ G+ + APN + +
Sbjct: 1736 ADANGFVRSEGAGVLIIKPLQKAIEDSDHIYSVIKGSGVSHGGRGMSLHAPNPAGMKDAM 1795
Query: 743 KSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD-------VFKNKTYNQKFCAITS 795
Y+ + ++P+ + YI HG + L D +EI AL + + C I+S
Sbjct: 1796 LKAYQGAQIDPKTVTYIEAHGIASPLADAIEIEALKSGCSQLELELPQEVREEAPCYISS 1855
Query: 796 NKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 855
K +IGH SG+ +L+ + ++K++ IP N+ + LK + F + N++W
Sbjct: 1856 LKPSIGHGELVSGMAALMKVSMAMKHQTIPGISGFSSLNDQVSLKGTRFRVTAENQQWRD 1915
Query: 856 VNEKL-----RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKT 910
+++ R +++++ G NAH++L+EYI K +S N H+VVLSAK
Sbjct: 1916 LSDDAGKKIPRRASINSYSFGGVNAHVILEEYIPLP----KPPVSMSENGAHIVVLSAKN 1971
Query: 911 KISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLN 970
+ LK +Q L ++ K + ++++ YTL GR + R A+++ S EE+V + L
Sbjct: 1972 QDRLKAIAQQQLDYVNKQQELSLQDYAYTLQTGREEMEDRLALVVRSKEELVIGLQACLA 2031
Query: 971 SK 972
K
Sbjct: 2032 EK 2033
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9R9J1|MYCA_BACIU Mycosubtilin synthase subunit A OS=Bacillus subtilis GN=mycA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 359 bits (921), Expect = 7e-98, Method: Composition-based stats.
Identities = 221/655 (33%), Positives = 346/655 (52%), Gaps = 62/655 (9%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 396
IE + + +++ KK I+ N + D G S+ L++ + + + + ++ + F+Y
Sbjct: 583 IETALLSIFSEVMDGKK--IHLNDHYFDMGATSLQLSQIAERIEQKFGCELTVADLFTYP 640
Query: 397 TLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKN 456
++ L + ++NH+ IK P ++ SK+I
Sbjct: 641 SIADLAAFLVENHSE--IKQTDTAKPSRSSSKDI-------------------------- 672
Query: 457 TDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSN 516
AIIGMS P A N ++FW +L N + I E P + Y IKS
Sbjct: 673 ---------AIIGMSLNVPGASNKSDFWHLLENGEHGIREYPAPRVKDAIDYLRSIKSER 723
Query: 517 KINSKWY---GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIA 573
N K + G + ID FD FF ++P A+ MDP QR LQ +W A+EDAGY + I+
Sbjct: 724 --NEKQFVRGGYLDEIDRFDYSFFGLAPKTAKFMDPNQRLFLQSAWHAIEDAGYAGDTIS 781
Query: 574 NQKIGMFVGVEE-GSNYQDRLDQVNLTSTHN-------AILSARLAYFMDLKGPVMAINT 625
++G++VG + G +Y+ L H+ ++L++R+AYF++LKGP + ++T
Sbjct: 782 GSQLGVYVGYSKVGYDYERLLSANYPEELHHYIVGNLPSVLASRIAYFLNLKGPAVTVDT 841
Query: 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 685
ACSSSLVA H+AC++L +C+ A++ G+ + P M S DG F + +
Sbjct: 842 ACSSSLVAVHMACKALLTGDCEMALAGGIRTSLLP----MRIGLDMESSDGLTKTFSKDS 897
Query: 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSV 745
+G E V AV+LK L A+ DGD I+ +I+GS IN DG T GITAP+ +QTE+I+
Sbjct: 898 DGTGSGEGVAAVLLKPLQAAIRDGDHIYGVIKGSAINQDGTTVGITAPSPAAQTEVIEMA 957
Query: 746 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 805
+K + + PE +++I HGTGTKLGDPVE N L F+ T ++FCAI S K+NIGH F
Sbjct: 958 WKDAGIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKVTEKKQFCAIGSVKANIGHLFE 1017
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 865
A+G+V LI + +K IP H K N I +SPFY+N+ + + LR G +
Sbjct: 1018 AAGIVGLIKSALMLNHKKIPPLAHFNKPNPLIPFHSSPFYVNQEVMDFTPEDRPLR-GGI 1076
Query: 866 SAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 925
S+FG SGTNAH+VL+EY + ++ N H+ VLSA T+ SL E Q ++
Sbjct: 1077 SSFGFSGTNAHVVLEEYTPESEYAPED-----GNDPHLFVLSAHTEASLYELTHQYRQYI 1131
Query: 926 RKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNY 980
++ + + YT GR H Y A+I+SS +E++ + + + + ++
Sbjct: 1132 SDDSQSSLRSICYTASTGRAHLDYCLAMIVSSNQELIDKLTSLIQGERNLPQVHF 1186
|
This protein is a multifunctional enzyme, able to activate a long chain fatty acid and link it with the amino acid Asn as part of the synthesis of mycosubtilin. The activation sites consist of individual domains. Bacillus subtilis (taxid: 1423) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q10977|PPSA_MYCTU Phthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium tuberculosis GN=ppsA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 347 bits (889), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 288/557 (51%), Gaps = 51/557 (9%)
Query: 338 ENDIKNHICNILNT----KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF 393
E D+++ + + L T E+ + +LAD G S S LS+ + P F+
Sbjct: 8 EADLRHWLIDYLVTNIGCTPDEVDPDLSLADLGVSSRDAVVLSGELSELLGRTVSPIDFW 67
Query: 394 SYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFIL 453
+ T+ L Y S S+ +
Sbjct: 68 EHPTINALAAYLAAPEP-----------------------------------SPDSDAAV 92
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 512
+ + +E IA++GM RFP + E W L + IS++P + W+ + P
Sbjct: 93 KRGARNSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPP 150
Query: 513 KSSNKI--NSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN 570
+ + + ++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P
Sbjct: 151 EVAAALARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPG 210
Query: 571 QIANQKIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAIN 624
+ G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++
Sbjct: 211 TLRRSATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVD 270
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER 684
TACSSSLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD
Sbjct: 271 TACSSSLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDAT 330
Query: 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 744
A+G V E VVLKRL+ A DGD + A+I GS +N DG++NG+ APN +Q ++++
Sbjct: 331 ADGFVRGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVNQDGRSNGLMAPNPAAQMAVLRA 390
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
Y + + P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT
Sbjct: 391 AYTNAGMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTE 450
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 864
AA+G+ I V ++++ IP + H E N +I + + + +W R G
Sbjct: 451 AAAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG- 509
Query: 865 VSAFGMSGTNAHIVLQE 881
VS+FG GTNAH+V+++
Sbjct: 510 VSSFGFGGTNAHVVIEQ 526
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXM0|PPSA_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 344 bits (883), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 287/557 (51%), Gaps = 51/557 (9%)
Query: 338 ENDIKNHICNILNT----KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF 393
E D+++ + + L T E+ + +LAD G S S LS+ + P F+
Sbjct: 8 EADLRHWLIDYLVTNIGCTPDEVDPDLSLADLGVSSRDAVVLSGELSELLGRTVSPIDFW 67
Query: 394 SYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFIL 453
+ T+ L Y S S+ +
Sbjct: 68 EHPTINALAAYLAAPEP-----------------------------------SPDSDAAV 92
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 512
+ + +E IA++GM RFP + E W L + IS++P + W+ + P
Sbjct: 93 KRGARNSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPP 150
Query: 513 KSSNKI--NSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN 570
+ + + ++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P
Sbjct: 151 EVAAALARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPG 210
Query: 571 QIANQKIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAIN 624
+ G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++
Sbjct: 211 TLRRSATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVD 270
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER 684
TACSSSLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD
Sbjct: 271 TACSSSLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDAT 330
Query: 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 744
A+G V E VVLKRL+ A DGD + A+I GS + DG++NG+ APN +Q ++++
Sbjct: 331 ADGFVRGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVTQDGRSNGLMAPNPAAQMAVLRA 390
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
Y + + P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT
Sbjct: 391 AYTNAGMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTE 450
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 864
AA+G+ I V ++++ IP + H E N +I + + + +W R G
Sbjct: 451 AAAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG- 509
Query: 865 VSAFGMSGTNAHIVLQE 881
VS+FG GTNAH+V+++
Sbjct: 510 VSSFGFGGTNAHVVIEQ 526
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (852), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 300/545 (55%), Gaps = 27/545 (4%)
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 512
++ + I E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y
Sbjct: 25 DRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDP 84
Query: 513 KSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI 572
+ ++ +KW G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ +
Sbjct: 85 LTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSL 144
Query: 573 ANQKIGMFVGVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINT 625
+ + +GV + YQ L D + T ++I R++Y + L+GP +A++T
Sbjct: 145 GGTRTAVMMGVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDT 203
Query: 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 685
ACSSSLVA H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A
Sbjct: 204 ACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAA 263
Query: 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSV 745
+G V E VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I
Sbjct: 264 DGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADA 323
Query: 746 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 805
+ ++ P+ +NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH A
Sbjct: 324 LRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEA 380
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 865
A+G+ I +++ IP +LH + N I ++ F++ N W T E R AV
Sbjct: 381 AAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAV 439
Query: 866 SAFGMSGTNAHIVLQEYIS-TNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLF 924
S+FG+ GTNAH+++++ +T +S+ +V++ KT + + + +
Sbjct: 440 SSFGLGGTNAHVIIEQGSELAPVSEGGEDTGVST-----LVVTGKTAQRMAATAQVLADW 494
Query: 925 LRKNNT-VCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKG 983
+ V + + +T+ +H + R A + V + + + + G
Sbjct: 495 MEGPGAEVAVADVAHTV----NHHRARQATFGTV---VARDRAQAIAGLRALAAGQHAPG 547
Query: 984 IVSHK 988
+VSH+
Sbjct: 548 VVSHQ 552
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q10978|PPSB_MYCTU Phthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2 | Back alignment and function description |
|---|
Score = 332 bits (851), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 300/545 (55%), Gaps = 27/545 (4%)
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 512
++ + I E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y
Sbjct: 25 DRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDP 84
Query: 513 KSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI 572
+ ++ +KW G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ +
Sbjct: 85 LTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSL 144
Query: 573 ANQKIGMFVGVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINT 625
+ + +GV + YQ L D + T ++I R++Y + L+GP +A++T
Sbjct: 145 GGTRTAVMMGVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDT 203
Query: 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 685
ACSSSLVA H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A
Sbjct: 204 ACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAA 263
Query: 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSV 745
+G V E VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I
Sbjct: 264 DGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADA 323
Query: 746 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 805
+ ++ P+ +NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH A
Sbjct: 324 LRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEA 380
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 865
A+G+ I +++ IP +LH + N I ++ F++ N W T E R AV
Sbjct: 381 AAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAV 439
Query: 866 SAFGMSGTNAHIVLQEYIS-TNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLF 924
S+FG+ GTNAH+++++ +T +S+ +V++ KT + + + +
Sbjct: 440 SSFGLGGTNAHVIIEQGSELAPVSEGGEDTGVST-----LVVTGKTAQRMAATAQVLADW 494
Query: 925 LRKNNT-VCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKG 983
+ V + + +T+ +H + R A + V + + + + G
Sbjct: 495 MEGPGAEVAVADVAHTV----NHHRARQATFGTV---VARDRAQAIAGLRALAAGQHAPG 547
Query: 984 IVSHK 988
+VSH+
Sbjct: 548 VVSHQ 552
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1005 | ||||||
| 44662946 | 8601 | mixed type I polyketide synthase/nonribo | 0.972 | 0.113 | 0.500 | 0.0 | |
| 423456310 | 1806 | hypothetical protein IEE_05053, partial | 0.968 | 0.538 | 0.499 | 0.0 | |
| 421078401 | 3436 | Beta-ketoacyl synthase [Pelosinus fermen | 0.960 | 0.280 | 0.449 | 0.0 | |
| 117617418 | 5521 | BryB [Candidatus Endobugula sertula] | 0.967 | 0.176 | 0.461 | 0.0 | |
| 121624846 | 5511 | BryB [Candidatus Endobugula sertula] | 0.947 | 0.172 | 0.470 | 0.0 | |
| 315647766 | 5441 | putative mixed polyketide synthase/non-r | 0.966 | 0.178 | 0.439 | 0.0 | |
| 345022635 | 2991 | DfnG [Ornithinibacillus scapharcae TW25] | 0.968 | 0.325 | 0.446 | 0.0 | |
| 326205046 | 1696 | 6-deoxyerythronolide-B synthase [Clostri | 0.852 | 0.505 | 0.463 | 0.0 | |
| 394993052 | 2713 | DfnG, partial [Bacillus sp. 916] gi|3938 | 0.947 | 0.350 | 0.444 | 0.0 | |
| 345022706 | 1625 | hypothetical protein OTW25_15521 [Ornith | 0.964 | 0.596 | 0.455 | 0.0 |
| >gi|44662946|gb|AAS47564.1| mixed type I polyketide synthase/nonribosomal peptide synthetase [symbiont bacterium of Paederus fuscipes] | Back alignment and taxonomy information |
|---|
Score = 984 bits (2545), Expect = 0.0, Method: Composition-based stats.
Identities = 515/1029 (50%), Positives = 691/1029 (67%), Gaps = 52/1029 (5%)
Query: 1 MPETQISIVFAEKITNFNIK----NWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSII 56
MPETQ+++VF E+ + +W+ +L EL KL S Y +R+ I+ +
Sbjct: 7253 MPETQVAVVFRERAADTGESSPTWDWLEVLVAELFAEKLRSACYRQG--VRHVPLIRPLA 7310
Query: 57 LKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF 115
+ S KQGG YLITGG G LGM+ +++L Y+ L+LSGRS L + Y+ L+
Sbjct: 7311 WQPGSASPFKQGGVYLITGGGGGLGMIVAEHLATVYAARLVLSGRSSSLAAEKYELLQAR 7370
Query: 116 NNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLS 175
+ +Y+ DV+D M ++ + P++GVLHIAG++G T+ +L+A F VL
Sbjct: 7371 GAQVLYVGADVTDVHAMQEVVDQARRHFSPLNGVLHIAGLNG-TAEVLKAEADAFQRVLD 7429
Query: 176 SKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+KI+G+ L+ L ++ LDF+CYF SSSAI+GDFGSCDYA+GNRFQ+ YA Y
Sbjct: 7430 AKITGSQVLDQVL-------RRESLDFICYFCSSSAIIGDFGSCDYALGNRFQSAYALYR 7482
Query: 236 NNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295
+ K + INWPLW + +G+ EQT FY +SS Q+ L + L L EQLL
Sbjct: 7483 AQMVESSALSGKTLAINWPLWQDGGLGVGDAEQTRFYLQSSGQRSLCSQEALALLEQLLT 7542
Query: 296 QDKIQYLVLSGELEKLNQIINN---------------IAPKVSENKKINN-FNIEKFIEN 339
QD+ Q LV +G+ ++L + +N A V+E ++ ++++ +
Sbjct: 7543 QDRAQCLVWAGQPDRLLRWVNQEPLEAATVTVPEPVRAAKAVAERAELGGGLDLQQCLLR 7602
Query: 340 DIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLE 399
D+K IC +L T+ +E+ + NL D+GFDSISLAEFSR+LS+FYSLDI PS+FFS+STL
Sbjct: 7603 DLKTKICELLGTQYNELENHANLVDFGFDSISLAEFSRVLSRFYSLDISPSVFFSHSTLN 7662
Query: 400 RLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDI 459
RL YF+ H T+ FY+ P E + +V +L T I
Sbjct: 7663 RLTAYFLAEHRQTLEGFYQQPQPAGPEHAPVPTEVAQV------SVPVPVTALLPTGTSI 7716
Query: 460 NS-----EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKS 514
S +E IAIIG+SGRFP AR I E W+IL +D I E+P FDW+ YY +P +
Sbjct: 7717 GSASQGQDEPIAIIGLSGRFPQARTIEELWRILEQGRDAIQEVPIDRFDWRSYY-SPSQE 7775
Query: 515 SNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIAN 574
+K NSKW G IPGI EFDPLFFEISPLEAERMDPRQRHL+QE+WLALEDAGYGP Q+
Sbjct: 7776 MSKSNSKWGGCIPGIAEFDPLFFEISPLEAERMDPRQRHLMQEAWLALEDAGYGPEQLEC 7835
Query: 575 QKIGMFVGVEEGSNYQDRL-DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVA 633
KI MFVGVEEG +YQ RL Q +LTS HN IL++RLAYF++LKGPVMAINTACSS+LVA
Sbjct: 7836 NKISMFVGVEEGCDYQRRLTQQTSLTSMHNGILASRLAYFLNLKGPVMAINTACSSALVA 7895
Query: 634 THIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693
H ACQSLR ECDTAI+AGVNL+++PEAY+ MT AGMLSPDGKCYVFD+RANGLVP EA
Sbjct: 7896 VHQACQSLRHGECDTAIAAGVNLLVAPEAYVGMTQAGMLSPDGKCYVFDKRANGLVPGEA 7955
Query: 694 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNP 753
V VVLKRLS+AL+DGDPI A+IRGSGINYDGKTNGITAP+G SQTEL++ +Y++ L P
Sbjct: 7956 VAVVVLKRLSKALADGDPIKALIRGSGINYDGKTNGITAPSGASQTELLEGIYRQCALQP 8015
Query: 754 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLI 813
+DI+YI+THGTGT+LGDP+EINAL+DVFK KT Q FCA+TS KSN+GHTFAASGLVSLI
Sbjct: 8016 QDISYIVTHGTGTQLGDPIEINALYDVFKGKTDKQGFCALTSIKSNLGHTFAASGLVSLI 8075
Query: 814 NLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGT 873
+LV +I+++ IP+SLHCE++N+YI + SPFY+N K W + RIGAVSAFGMSGT
Sbjct: 8076 SLVLAIRHRTIPSSLHCEQKNDYIRWQESPFYVNTRKKHWECALGQPRIGAVSAFGMSGT 8135
Query: 874 NAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCI 933
NAH+V+QE+ + + + + ++ PY++ V+SAKT+ +L+E+++Q +L ++ +
Sbjct: 8136 NAHVVVQEH-----QPAEPSRWSTAAPYYLWVVSAKTETTLQEQIRQWEDYLSRHPDLDF 8190
Query: 934 ENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNK 993
E YTL++GRHHF+YRCAI+ + +V++ + L+ + + N G V F+ K
Sbjct: 8191 EAVSYTLLKGRHHFKYRCAIVAKDLSQVLQALRQALDRQTQ---ANLCMGCVDRDFSGQK 8247
Query: 994 IIDSYINKL 1002
I +I L
Sbjct: 8248 AIRDFIASL 8256
|
Source: symbiont bacterium of Paederus fuscipes Species: symbiont bacterium of Paederus fuscipes Genus: Family: Order: Class: Phylum: Superkingdom: Bacteria |
| >gi|423456310|ref|ZP_17433162.1| hypothetical protein IEE_05053, partial [Bacillus cereus BAG5X1-1] gi|401130743|gb|EJQ38403.1| hypothetical protein IEE_05053, partial [Bacillus cereus BAG5X1-1] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1022 (49%), Positives = 683/1022 (66%), Gaps = 49/1022 (4%)
Query: 1 MPETQISIVFAEKITNFN-IKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKD 59
+P TQ+S+++ E I+ W+ L+ ELQ K+ S++Y RY IK +++
Sbjct: 615 LPNTQVSLIYQEAEGETGVIREWMMKLWAELQTQKVQSVLYQKGK--RYVSQIKPTVVES 672
Query: 60 FKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF---N 116
K +K GGTYLITGG G LG LF+++L S NLIL+GRS L++ +K+K
Sbjct: 673 GKG-IVKTGGTYLITGGLGGLGFLFAEHLAKTQSVNLILNGRSMLSAEKQEKIKALEALG 731
Query: 117 NKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSS 176
++ +Y+Q D+ D M IN G I GV+H AGI G + NILE Y +F VL
Sbjct: 732 SQVLYVQADICDMSGMKEGINRAKERFGSIHGVIHAAGIVG-SPNILEKEYSSFQKVLDP 790
Query: 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLN 236
KI GT+ L+ L ++DF+CYFSS+ A LGDFGSCDYA+GNRFQ YA Y N
Sbjct: 791 KIQGTLILDELLRG-------EQIDFICYFSSAVANLGDFGSCDYAIGNRFQMAYAHYRN 843
Query: 237 NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLLI 295
+ N INWPLW + I ++E T Y +SS Q+ L +GLKLF+Q+L
Sbjct: 844 HVQQLDGQQNNTFVINWPLWKDGGMNISDDEHTTKMYLQSSGQRSLETEEGLKLFDQILG 903
Query: 296 QDKIQYLVLSGELEKLNQIINNIAPKVSENKKINNF-----------NIEKFIENDIKNH 344
Q++IQ LVL G+ ++ + + ++ K S + N+F NIE+ +E D+K H
Sbjct: 904 QNRIQNLVLVGQTSRMMEFLGSLITKSSTSVNSNHFGKGKRAEMKGLNIEQCLEWDLKEH 963
Query: 345 ICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 404
I +L ++ + +NL+D+GFDSISLAEF+++L+ +Y +DI P++FF YST+ +LI +
Sbjct: 964 ISQLLKIPRNRLDLEENLSDFGFDSISLAEFAKLLTNYYGIDIKPALFFDYSTIRKLIQF 1023
Query: 405 FIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEEL 464
F + H+ + +FY + K I + + Y+ + + F++ ++ E
Sbjct: 1024 FYQEHSEVVQEFYHVD---NVKEKVIPDVPKKSVLSKYKRQGRTARFLV-RDESKTIPEP 1079
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
IAIIGMSGRFP ARNINE WKIL KDV+ EIP + FDW+ YY N K N KW G
Sbjct: 1080 IAIIGMSGRFPQARNINEMWKILTEGKDVVQEIPPERFDWQKYYSNS-GEPGKTNGKWCG 1138
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
SIPG+DEFDPLFFEISP EA+ MDPRQR LLQESW ALEDAGYG QI N +IGMFVGVE
Sbjct: 1139 SIPGVDEFDPLFFEISPREAKSMDPRQRLLLQESWKALEDAGYGEKQIKNSQIGMFVGVE 1198
Query: 585 EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQH 644
+G + D N+TS HNAIL+ARL+YF++L GP MAINTACSS LVA H AC SLR H
Sbjct: 1199 DGDYQRFAEDNGNVTSNHNAILAARLSYFLNLNGPNMAINTACSSGLVAAHQACMSLRNH 1258
Query: 645 ECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704
ECDTAI+AGVNL+ +PE+YI M+ GMLS DGKC+ FD+RANG+VP EAVVAVVLKRLS+
Sbjct: 1259 ECDTAIAAGVNLIFTPESYIGMSEVGMLSSDGKCFAFDKRANGMVPGEAVVAVVLKRLSQ 1318
Query: 705 ALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764
A +DGDPI+A+I GSGINYDGKTNGITAP+G SQT L+KSVY + +NPE+I YI+THGT
Sbjct: 1319 AEADGDPIYAVIPGSGINYDGKTNGITAPSGASQTNLLKSVYDQYQINPEEIEYIVTHGT 1378
Query: 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKII 824
GTKLGDP+EINAL++ FK+ T Q +CAITS K+N GHT AASGLVSL++LVQ+ ++KII
Sbjct: 1379 GTKLGDPIEINALYNAFKDYTEKQGYCAITSTKTNFGHTLAASGLVSLVSLVQAFRHKII 1438
Query: 825 PASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY-- 882
PASLHC++EN+YI K SPFY+NK+NK W NE+ R+GA+SAFGMSGTNAH+VLQ Y
Sbjct: 1439 PASLHCKQENDYINWKESPFYVNKANKLWPEKNEEKRMGAISAFGMSGTNAHMVLQSYNE 1498
Query: 883 -ISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLR-KNNTVCIENFVYTL 940
+ T+FK PY+++ SAK++ +L+EK+K ++ L+ K V + YTL
Sbjct: 1499 EVDTSFK----------APYYLLAFSAKSQEALQEKIKDMMSVLQDKERQVDLSQISYTL 1548
Query: 941 MQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYIN 1000
++GRHHF +RCA++I E+ + ++N N +E++ N +G VS F K+I+ Y
Sbjct: 1549 LEGRHHFTHRCAVVIQDQEDAMYVLNQMKN-RERL--PNLFRGKVSRDFKGQKVIEEYAQ 1605
Query: 1001 KL 1002
L
Sbjct: 1606 DL 1607
|
Source: Bacillus cereus BAG5X1-1 Species: Bacillus cereus Genus: Bacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|421078401|ref|ZP_15539355.1| Beta-ketoacyl synthase [Pelosinus fermentans JBW45] gi|392523591|gb|EIW46763.1| Beta-ketoacyl synthase [Pelosinus fermentans JBW45] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1025 (44%), Positives = 653/1025 (63%), Gaps = 60/1025 (5%)
Query: 1 MPETQISIVFAEKITN---FNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIIL 57
+P Q++ V+ E I++W+N ++ ELQ K+ S++Y G + ++
Sbjct: 1233 LPNMQVAAVYKEAYPENKERAIRDWLNTIWTELQADKIQSVLYQGG---KRSVHRSQATA 1289
Query: 58 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK---K 114
+S ++ GGTYLI GG G +G LF+ Y K+ NLIL+GRS N K+K
Sbjct: 1290 MQANSSLLRAGGTYLIVGGCGEIGFLFAKYFAQKHPVNLILTGRSPKNEDKQAKIKILED 1349
Query: 115 FNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVL 174
++ +YI+ DV D M ++ G I GV+H A I S I E + + F V+
Sbjct: 1350 LGSQIMYIEADVCDASGMKEGLSRAKERFGKIHGVIHAARIESKQS-IFEKDIQGFQQVI 1408
Query: 175 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY 234
+ KI+GT+ L+ L +LDF+CYFSSSSAILGDFGSCDYA+GNRFQ YA Y
Sbjct: 1409 APKITGTLVLDEVL-------AAEELDFICYFSSSSAILGDFGSCDYAIGNRFQMAYAHY 1461
Query: 235 LNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 294
+ + K + INWPLW + NE Y K+S Q+ L +G+ +FE +L
Sbjct: 1462 RKEEQRH----GKTVVINWPLWKDFGMDADENEHIKMYLKTSGQRFLEAEEGVAIFEHIL 1517
Query: 295 IQDKIQYLVLSGELEKLNQIINN------------IAPKVSENK-KINNFNIEKFIENDI 341
Q + Q+LV+ G+ ++++ + +P V + ++ + E+ +E D+
Sbjct: 1518 AQHQTQHLVVVGQRSRVHRFLGLAQNQSASSPQALTSPAVKGRRAEMIGLDAEQCLEWDL 1577
Query: 342 KNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERL 401
K ++ +L + ++ + NL D+GFDS+ L++F+++L+ Y ++I P+IFF Y T+E+L
Sbjct: 1578 KEYVSKLLKISRDKLDREINLVDFGFDSVGLSQFAKLLTSHYGIEISPAIFFGYFTIEKL 1637
Query: 402 ITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINS 461
I YFI H + +N Y T ++IS + + ++ +KKS F N+N+ S
Sbjct: 1638 IQYFITEHQ----ELIQNYYEEDTIQQSISQKVETIAVKPKQHRNKKSRF--NRNSASPS 1691
Query: 462 E-ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 520
E IAIIGMSGRFP ARNI+E WKI++ +DV+ E E F W + + SNK
Sbjct: 1692 GLEPIAIIGMSGRFPDARNIDEMWKIILEGQDVVKENSEDKF-WGMGF-----GSNKWKC 1745
Query: 521 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF 580
W IPG+ EFDPLFF I P EAE MDPRQR LLQESW ALEDAGYG +I N IGMF
Sbjct: 1746 GW---IPGVKEFDPLFFGIPPREAEMMDPRQRLLLQESWRALEDAGYGKERIKNSTIGMF 1802
Query: 581 VGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQS 640
VGVE+G + ++ ++TS HN +L+ARLAYF++L GP MAINTACSS LVA H A QS
Sbjct: 1803 VGVEDGDYHMLSNEKGSVTSNHNGVLAARLAYFLNLDGPNMAINTACSSGLVAAHQAYQS 1862
Query: 641 LRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 700
LR ECDTAI+AG+NL+++P AM+ AGMLS DGKCY FD+RANG+VP EA+ VVLK
Sbjct: 1863 LRNQECDTAIAAGINLLLTPGVLTAMSQAGMLSEDGKCYAFDKRANGMVPGEAIAVVVLK 1922
Query: 701 RLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYII 760
RLS+A +DGDPI+A+I+GSGINYDGKTNGIT P+G+SQ++L+KSVY ++ +NPE+I YI+
Sbjct: 1923 RLSKAQADGDPIYAVIKGSGINYDGKTNGITVPSGVSQSKLLKSVYDRNKVNPEEIEYIV 1982
Query: 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 820
THGTGTKLGDP+EINAL+DVFK T Q +CA+TS K+N GHT AASGLVSLI++VQ+++
Sbjct: 1983 THGTGTKLGDPIEINALYDVFKGYTKKQSYCALTSVKTNFGHTMAASGLVSLISMVQALR 2042
Query: 821 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880
Y+ IPASLHCE+EN+YI + SPFY+NK+NK W+ N K R G++SAFG+SGTN H+++Q
Sbjct: 2043 YETIPASLHCEQENDYINWQESPFYVNKTNKIWSKDNGKQRSGSISAFGLSGTNVHMIVQ 2102
Query: 881 EYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNT--VCIENFVY 938
Y +N + PY+++ SAKTK +L+EK++ ++ L+K + + Y
Sbjct: 2103 SY-----SEAENTASLEQMPYYLLAFSAKTKEALQEKIQDMIDVLQKKDAQEASLAELSY 2157
Query: 939 TLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSY 998
TL+QGR HF +RC +++ E+ + + +N KE++ N G VS +FT K I+ Y
Sbjct: 2158 TLLQGRQHFNHRCVVVVQGREDAIYALQQ-VNGKERL--PNLFHGKVSREFTRQKAIEQY 2214
Query: 999 INKLF 1003
+L
Sbjct: 2215 AQELL 2219
|
Source: Pelosinus fermentans JBW45 Species: Pelosinus fermentans Genus: Pelosinus Family: Veillonellaceae Order: Selenomonadales Class: Negativicutes Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|117617418|gb|ABK51300.1| BryB [Candidatus Endobugula sertula] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats.
Identities = 485/1050 (46%), Positives = 648/1050 (61%), Gaps = 78/1050 (7%)
Query: 1 MPETQISIVF-------AEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIK 53
+P+ +++++ + +TN + WI L+ L+ K+ S +Y RY L +
Sbjct: 3977 LPDVEVAVLLEAVEGSQSHTVTN-QMDLWIEKLWSSLKAQKVHSSLYQNGR--RYVLKNQ 4033
Query: 54 SIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN---SIIYK 110
+ L +N QG T LITGG G LG +F+DY Y NLIL GRS L+ +
Sbjct: 4034 PLPLVMNQNIQCLQG-TLLITGGCGGLGFVFADYFSKTYKINLILVGRSDLDKEKQSQIQ 4092
Query: 111 KLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNF 170
L+K ++ Y+Q D+ D+ + E++ GPI GV+H AGI I E + +NF
Sbjct: 4093 ALEKSGSRVAYVQTDICDEKNLQLELDIAQKYCGPIQGVIHAAGIID-QKTIFEKSPENF 4151
Query: 171 YSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTV 230
+VL+ KI GT+ L+ L LDF+CYFSSSSA+LGD GSCDYAM NRF
Sbjct: 4152 QAVLAPKIQGTLILDNVL-------SAQSLDFICYFSSSSALLGDAGSCDYAMANRFLMA 4204
Query: 231 YAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQKVLHENDGL 287
+A+Y N K K + I+WP WN + N +T+FY KSS Q++L +G
Sbjct: 4205 HAQYRNTLVSEGKRKGKTLVIHWPAWNVKGMGLNGLDENVKTEFYLKSSGQRLLDIKEGC 4264
Query: 288 KLFEQLLIQDKIQYLVLSGELEKLNQIIN-----------------NIAPKVSENKK--I 328
+L LL QD Q L+L+G ++ Q + N+ + NK+ I
Sbjct: 4265 ELLNTLLAQDYSQCLILAGRKNRIYQFLGLTQDVSTSQVSQGQEVMNLQQDLDSNKRAEI 4324
Query: 329 NNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIM 388
+ ++E+ I D+K I L + + NLAD+GFDS+SLA FSR LS Y +I
Sbjct: 4325 EDLSVEECIILDLKTLITEQLKIPSAHLDVESNLADFGFDSVSLANFSRALSIHYHFNIT 4384
Query: 389 PSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKK 448
PS+FF Y T+ERL YF+K H M FY+ K KT + N N ++ +V +K
Sbjct: 4385 PSVFFGYPTIERLSGYFLKEHTALMEAFYQQK---KTSNSN------NTLSVIVPHVKEK 4435
Query: 449 SNFIL---NKNTDI----------NSEELIAIIGMSGRFPAARNINEFWKILINNKDVIS 495
L N + I + +E IAIIGMSGRFP AR + W+IL K +
Sbjct: 4436 PTTDLISSNASPSIADPLPPQAIESIDEPIAIIGMSGRFPEARTVEAMWEILSEGKSAVQ 4495
Query: 496 EIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLL 555
EIP + F+W YYE+P K NSKW IPGI EFDP FFEISP EA+++DP QRHLL
Sbjct: 4496 EIPIERFNWHEYYEHPSDDVRKTNSKWSACIPGIKEFDPQFFEISPREAKKLDPLQRHLL 4555
Query: 556 QESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMD 615
QESW ALE+A YG I N+ +G F+GVEEG Y++ L++ T HNAIL++RLAYF+D
Sbjct: 4556 QESWNALENAAYGKLHIDNKTMGTFIGVEEGY-YKNLLNEDEATLNHNAILASRLAYFLD 4614
Query: 616 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD 675
GP MAINTACSS LVA H AC SLRQ ECDTAI A NL+ +P+ Y+ MT AGMLSPD
Sbjct: 4615 FSGPTMAINTACSSGLVALHQACLSLRQQECDTAIVAAANLIFTPQVYVGMTQAGMLSPD 4674
Query: 676 GKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNG 735
GKCY FD+RANG+VP EAVVA+VLKRLSRA +DGDPI+A IRG+GINYDGKTNGITAP+G
Sbjct: 4675 GKCYTFDQRANGIVPGEAVVAIVLKRLSRAEADGDPIYASIRGTGINYDGKTNGITAPSG 4734
Query: 736 ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITS 795
+QT L+K+VYK++ +N EDI+YI+THGTGTKLGD +E+NAL+D FK++T Q +CA+TS
Sbjct: 4735 TAQTRLLKNVYKRAQVNVEDISYIVTHGTGTKLGDLIEVNALYDAFKSETSKQGYCALTS 4794
Query: 796 NKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 855
K+N GHTFAASGL+SL+NLVQ+ ++ IPASL+CEKEN+YI +SPFY+NK NK W
Sbjct: 4795 AKTNFGHTFAASGLLSLVNLVQAFQHDQIPASLYCEKENDYIQWSSSPFYVNKHNKPWPR 4854
Query: 856 VNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLK 915
+ K R+GAVSAFGMSGTNAHIVLQEY +KN ++ + PY ++VLSAKT+I+L+
Sbjct: 4855 QSGKPRLGAVSAFGMSGTNAHIVLQEYPD----EVKNVSYKA--PYFLLVLSAKTEIALQ 4908
Query: 916 EKMKQILLFLRKN--NTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKE 973
E++ +L L+ + + TL GR+HFQYRCA+++ +E + + S+
Sbjct: 4909 ERLSSLLGALQYEPIKKQAMASIACTLQTGRYHFQYRCALVVKDRDEAISCLQQVSGSEN 4968
Query: 974 KILHTNYLKGIVSHKFTSNKIIDSYINKLF 1003
+YL G V + K D YI L
Sbjct: 4969 P---AHYLTGKVVRGLSKEKESDEYIQDLL 4995
|
Source: Candidatus Endobugula sertula Species: Candidatus Endobugula sertula Genus: Candidatus Endobugula Family: Order: Alteromonadales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|121624846|gb|ABM63527.1| BryB [Candidatus Endobugula sertula] | Back alignment and taxonomy information |
|---|
Score = 877 bits (2267), Expect = 0.0, Method: Composition-based stats.
Identities = 481/1022 (47%), Positives = 634/1022 (62%), Gaps = 70/1022 (6%)
Query: 22 WINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLG 81
WI L+ L+ K+ S +Y RY L + + L ++ QG T LITGG G LG
Sbjct: 3994 WIEKLWSSLKAQKVHSSLYQNGR--RYFLKTQPLQLVMNQSIQCLQG-TLLITGGCGGLG 4050
Query: 82 MLFSDYLINKYSTNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 138
+F+DY Y NLIL GRS L+ + L+K ++ Y+Q D+ D+ + E++
Sbjct: 4051 FVFADYFSKTYKINLILVGRSDLDKEKQSQIQALEKSGSRVAYVQTDICDEKNLQLELDI 4110
Query: 139 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN 198
GPI GV+H AGI I E + +NF +VL+ KI GT+ L+ L
Sbjct: 4111 AQKYCGPIQGVIHAAGIID-QKTIFEKSPENFQAVLAPKIQGTLILDNVL-------SAQ 4162
Query: 199 KLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258
LDF+CYFSSSSA+LGD GSCDYAM NRF +A+Y N K K + I+WP WN
Sbjct: 4163 SLDFICYFSSSSALLGDAGSCDYAMANRFLMAHAQYRNTLVSEGKRKGKTLVIHWPAWNV 4222
Query: 259 SKFKIG---NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQII 315
+ N +T+FY KSS Q++L +G +L LL QD Q L+L+G ++ Q +
Sbjct: 4223 KGMGLNGLDENVKTEFYLKSSGQRLLDIKEGCELLNTLLAQDYSQCLILAGRKNRIYQFL 4282
Query: 316 N-----------------NIAPKVSENKK--INNFNIEKFIENDIKNHICNILNTKKSEI 356
N+ + NK+ I + ++E+ I D+K I L + +
Sbjct: 4283 GLTQDVSTSQVSQGQEVMNLQQDLDSNKRAEIEDLSVEECIILDLKTLITEQLKIPSAHL 4342
Query: 357 YKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKF 416
NLAD+GFDS+SLA FSR LS Y +I PS+FF Y T+ERL YF+K H M F
Sbjct: 4343 DVESNLADFGFDSVSLANFSRALSIHYHFNITPSVFFGYPTIERLSRYFLKEHTALMEAF 4402
Query: 417 YRNKYPLKTESKNISILYDNKINENYENVSKKSNFIL---NKNTDI----------NSEE 463
Y+ K KT + N N ++ +V +K L N + I + +E
Sbjct: 4403 YQQK---KTSNSN------NTLSVIVPHVKEKPTTDLISSNASPSIADPLPPQAIESIDE 4453
Query: 464 LIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWY 523
IAIIGMSGRFP AR + W+IL K + EIP + F+W YYE+P K NSKW
Sbjct: 4454 PIAIIGMSGRFPEARTVEAMWEILSEGKSAVQEIPIERFNWHEYYEHPSDDVRKTNSKWS 4513
Query: 524 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV 583
IPGI EFDP FFEISP EA+++DP QRHLLQESW ALE+A YG I N+ +G F+GV
Sbjct: 4514 ACIPGIKEFDPQFFEISPREAKKLDPLQRHLLQESWNALENAAYGKLHIDNKTMGTFIGV 4573
Query: 584 EEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQ 643
EEG Y++ L++ T HNAIL++RLAYF+D GP MAINTACSS LVA H AC SLRQ
Sbjct: 4574 EEGY-YKNLLNEDEATLNHNAILASRLAYFLDFNGPTMAINTACSSGLVALHQACLSLRQ 4632
Query: 644 HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703
ECDTAI A NL+ +P+ Y+ MT AGMLSPDGKCY FD+RANG+VP EAVVA+VLKRLS
Sbjct: 4633 QECDTAIVAAANLIFTPQVYVGMTQAGMLSPDGKCYTFDQRANGIVPGEAVVAIVLKRLS 4692
Query: 704 RALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 763
RA +DGDPI+A IRG+GINYDGKTNGITAP+G +QT L+K+VYK++ +N EDI+YI+THG
Sbjct: 4693 RAEADGDPIYASIRGTGINYDGKTNGITAPSGTAQTRLLKNVYKRAQVNVEDISYIVTHG 4752
Query: 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKI 823
TGTKLGD +E+NAL+D FK++T Q +CA+TS K+N GHTFAASGL+SL+NLVQ+ ++
Sbjct: 4753 TGTKLGDLIEVNALYDAFKSETRKQGYCALTSAKTNFGHTFAASGLLSLVNLVQAFQHDQ 4812
Query: 824 IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883
IPASL+CEKEN+YI +SPFY+NK NK W + K R+GAVSAFGMSGTNAHIVLQEY
Sbjct: 4813 IPASLYCEKENDYIQWSSSPFYVNKHNKPWPRQSGKPRLGAVSAFGMSGTNAHIVLQEYP 4872
Query: 884 STNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN--NTVCIENFVYTLM 941
+KN ++ + PY ++VLSAKT+I+L+E++ +L L+ + TL
Sbjct: 4873 D----EVKNVSYKA--PYFLLVLSAKTEIALQERLSSLLGALQYEPIKKQAMARIACTLQ 4926
Query: 942 QGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINK 1001
GR+HFQYRCA+++ +E + + S+ +YL G V + K D YI
Sbjct: 4927 TGRYHFQYRCALVVKDRDEAISCLQQVSGSENP---AHYLTGKVVRGLSKEKESDEYIQD 4983
Query: 1002 LF 1003
L
Sbjct: 4984 LL 4985
|
Source: Candidatus Endobugula sertula Species: Candidatus Endobugula sertula Genus: Candidatus Endobugula Family: Order: Alteromonadales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|315647766|ref|ZP_07900867.1| putative mixed polyketide synthase/non-ribosomal peptide synthetase [Paenibacillus vortex V453] gi|315276412|gb|EFU39755.1| putative mixed polyketide synthase/non-ribosomal peptide synthetase [Paenibacillus vortex V453] | Back alignment and taxonomy information |
|---|
Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats.
Identities = 457/1041 (43%), Positives = 658/1041 (63%), Gaps = 70/1041 (6%)
Query: 1 MPETQISIVFAEKITNFNIKNWINI---LFKELQEPKLFSIMYYGNDLIRYQLNIKSIIL 57
+P +S++ E + +W + L E+ + S+ Y R+ IK ++
Sbjct: 2182 LPNISVSVISLESQAQPHEVSWREVTQRLLAEISNNQATSVWYQKGK--RHVRQIKPTVM 2239
Query: 58 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN 117
+ N +K GGTYL+TGG G LG+LF+ ++ +Y NLIL+GRS +N + +++ N
Sbjct: 2240 ANGSN-MLKNGGTYLVTGGCGGLGLLFARHMAERYGANLILTGRSPMNDEMRVSMEELKN 2298
Query: 118 KA---IYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVL 174
+ +Y+Q D+ D M + + G I GV+H AG+S + NILE ++F+ +L
Sbjct: 2299 RGGHVVYVQADICDAEGMREGLAPAKDRFGAIHGVIHAAGMSS-SQNILEKEIEDFHKIL 2357
Query: 175 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY 234
+ K+ GT+AL L+ + +LDF+CYFSS+SA+LGDFGSCDYA+GNRFQ YA+Y
Sbjct: 2358 APKVEGTLALEALLQG------EQQLDFICYFSSTSAVLGDFGSCDYAVGNRFQMAYARY 2411
Query: 235 LNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 294
N + + + + INWPLW + + T+ Y KSS Q+ L +GL++FE++L
Sbjct: 2412 RNEQ----RRSGRTFVINWPLWKDGGMGFQDKANTELYLKSSGQRFLETEEGLQIFERIL 2467
Query: 295 IQDKIQYLVLSGELEKLNQIIN------NIAPKVSENKKIN--------------NFNIE 334
Q+L+L G+ ++++ + I K E+K + ++E
Sbjct: 2468 SNSHSQHLILVGQRSRVHRFLGLADRGAVIEAKEQESKTVQALSAPGRGWRSEMKGLSLE 2527
Query: 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS 394
+ +E D+K + +L + ++ +NLA++GFDSI+LA+F+ L++ Y LDI PS+FF
Sbjct: 2528 QCLERDLKEIVSQLLKIPRDKLDLEENLAEFGFDSINLAQFANALTEHYGLDITPSLFFG 2587
Query: 395 YSTLERLITYFIKNHNNTMIKFYRN--------KYPL-KTESKNISI-LYDNKINENYEN 444
ST+ +LI YF+ H + FY+ + PL ++ES+ + + + N
Sbjct: 2588 QSTIGKLIGYFLDEHKELVADFYQEGQIEHTDLRQPLNRSESEQTAFKRARGSVRKAIPN 2647
Query: 445 VSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDW 504
+S + E IAIIGMSGRFP ARNI+E W IL + +SE+P + FDW
Sbjct: 2648 LSPPA-----------MHEPIAIIGMSGRFPEARNIDEMWTILAEGRSAVSEVPVERFDW 2696
Query: 505 KLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALED 564
+ YY + + S +I+ KW G+IPG+ EFDP+FFEISP EA+ MDPRQR LLQESW ALED
Sbjct: 2697 RKYYGDGEQESGQIHCKWCGTIPGVSEFDPMFFEISPNEAKTMDPRQRLLLQESWKALED 2756
Query: 565 AGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAIN 624
AGYG +++ KIGMFVGVE+G + D+ +TS HNAIL+ARL+YF++L GP MAIN
Sbjct: 2757 AGYGEDRLGTGKIGMFVGVEDGDYHLLVKDKGTITSNHNAILAARLSYFLNLSGPNMAIN 2816
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER 684
TACSS LVA H AC SLR ECDTAI AGVNL+++P+AY ++ AG+LS DGKCY FD R
Sbjct: 2817 TACSSGLVAAHQACMSLRNGECDTAIVAGVNLLLTPQAYAGISQAGILSADGKCYAFDNR 2876
Query: 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 744
ANG VP EAV +V KRLS+A +DGDPI A+IRGSG+NYDG+TNGITAP+G++Q++L++
Sbjct: 2877 ANGTVPGEAVAVLVFKRLSQAEADGDPIQAVIRGSGVNYDGRTNGITAPSGVAQSKLLRE 2936
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
+Y + +NPE+I YI+THGTGTKLGDPVEINAL++ FK T Q +CA+TS+K+N GH F
Sbjct: 2937 IYAQYQINPEEIEYIVTHGTGTKLGDPVEINALNEAFKAHTGKQSYCALTSSKTNFGHAF 2996
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 864
AASGLVSLINLV S+++++IP SLH E+EN+YI SPFY+N+ K W+ +R GA
Sbjct: 2997 AASGLVSLINLVLSLRHEMIPPSLHFEQENDYIHWGASPFYVNREAKVWSRPEGTVRTGA 3056
Query: 865 VSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLF 924
VSAFGMSGTNAH+VL+ Y ++ K + PYH++ LSAKTK +L EK++ ++
Sbjct: 3057 VSAFGMSGTNAHMVLESYA----RDRKGGVSKARPPYHLLALSAKTKEALDEKIRDMIQT 3112
Query: 925 LRKN--NTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLK 982
L + N + + YTL++GR HF +RCA++I + + K + +S EK+ N
Sbjct: 3113 LDQETWNDEDLPHISYTLLKGRRHFSHRCAVVIQDLGD-AKYVLKLSSSSEKV--PNLFT 3169
Query: 983 GIVSHKFTSNKIIDSYINKLF 1003
G V FT K + YI +L
Sbjct: 3170 GRVPRDFTGQKAMQLYIQELL 3190
|
Source: Paenibacillus vortex V453 Species: Paenibacillus vortex Genus: Paenibacillus Family: Paenibacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|345022635|ref|ZP_08786248.1| DfnG [Ornithinibacillus scapharcae TW25] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1033 (44%), Positives = 660/1033 (63%), Gaps = 60/1033 (5%)
Query: 1 MPETQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDF 60
MP T++SI+ A + + +W+ L+KE+ K S+ Y GN R +I+ I +++
Sbjct: 1096 MPGTKVSIIIANR-NETHSADWVERLWKEIHVVKAESVWYEGNH--RMVNSIRPIQVEES 1152
Query: 61 KNSY-IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYK--KLKKFNN 117
+ +K+GG YL+TGG G LGM+FS +L+ KY LIL RS + K +LK
Sbjct: 1153 SQTVPLKKGGVYLLTGGVGGLGMIFSRWLVEKYQAKLILINRSSEEAKKDKLQELKNLGA 1212
Query: 118 KAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSK 177
+ +Y DV + ++ + + + G +DGV+H AGI G S ILE + + + L K
Sbjct: 1213 EVVYYSADVCNADELKQAVKAGKEHFGRLDGVIHAAGIEGKGS-ILEKSVEEYLRCLGPK 1271
Query: 178 ISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNN 237
+ GT+AL AL Q LDF+CYFSSSSAI+GDFG+ DYA+GNRF Y Y
Sbjct: 1272 VQGTLALEEAL-------QGETLDFICYFSSSSAIIGDFGNGDYAVGNRFLMSYGAYREQ 1324
Query: 238 KNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297
+ Y K + INWPLW + + E + Y KSS QK L +G +FE+LL Q
Sbjct: 1325 EG----YPGKTVIINWPLWKSEGMGFEDEEGSKMYLKSSGQKFLESEEGTAIFEKLLSQT 1380
Query: 298 KIQYLVLSGELE--------------KLNQIINN---IAPKVSENKKINNFNIEKFIEND 340
+ Q+LV+ G E K+ +I N ++P ++ ++ IE+ + D
Sbjct: 1381 RNQHLVMVGSRERVYRFLRIKEKVDAKMEKIETNKVIVSPGKGRRPEMKDWTIEQCLLWD 1440
Query: 341 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 400
+K++ IL K ++ +NLAD+GFDS+SL EF+ +LS Y +DI P IFF Y T+ER
Sbjct: 1441 LKDNTSQILQIPKEKLGIEENLADFGFDSVSLGEFAELLSNRYQIDITPDIFFGYPTMER 1500
Query: 401 LITYFIKNHNNTMIKFYRN--KYPLKTESK------NISILYDNKINENYENVSKKSNFI 452
L Y ++ + M +FY ++P++ E + ++ + +++ ++++ NF
Sbjct: 1501 LSEYLLERYRVEMAEFYHEGEEHPIEVEQEVSYALAGVAATKEKYVDKKERKITRR-NFS 1559
Query: 453 LNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPI 512
K+ D++ E+ IAIIGMSGRFP AR+++EFW IL K+VI E+P + +W
Sbjct: 1560 NQKSRDVSKEDSIAIIGMSGRFPEARSVDEFWSILKEGKEVIREVPHERTEWP------- 1612
Query: 513 KSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI 572
+++ K +G +PG+ EFDPLFFEISP EA +DPRQR LLQE+W ALEDAGYG
Sbjct: 1613 -EADRKGRK-FGILPGLAEFDPLFFEISPREASYIDPRQRLLLQETWKALEDAGYGSKAF 1670
Query: 573 ANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLV 632
N+KIGMFVG+E+G ++ +T+ HNAIL+ARL+YF++L GP MAINTACSSSLV
Sbjct: 1671 DNEKIGMFVGIEDGDYKTIAGNEAGITTNHNAILAARLSYFLNLDGPNMAINTACSSSLV 1730
Query: 633 ATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSE 692
A H ACQSLR ECDTAI AG NLMI+PE Y +M AGMLS +G CY FD+RANG+VP E
Sbjct: 1731 AVHQACQSLRSGECDTAIVAGANLMITPELYNSMNHAGMLSEEGTCYAFDKRANGMVPGE 1790
Query: 693 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 752
AV A+VLKR S+A +D +PI+A I GSGINYDGKTNGITAP+G SQ++LIK VY ++N
Sbjct: 1791 AVAAIVLKRQSKAEADRNPIYASIVGSGINYDGKTNGITAPSGSSQSKLIKEVYDHYHIN 1850
Query: 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812
P+D+ YI+THGTGTKLGDPVEINAL + FK+ + + +CA+TS K NIGHT AASGLVSL
Sbjct: 1851 PQDMEYIVTHGTGTKLGDPVEINALSEAFKDYSEARNYCALTSVKPNIGHTLAASGLVSL 1910
Query: 813 INLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 872
I+LV S+K+++IPAS++CE+ NNYI +NSPFY+N++N++W + K R+ AVS+FGMSG
Sbjct: 1911 ISLVMSLKHEMIPASINCEQPNNYIQWENSPFYVNRANREWKDRDGKRRLSAVSSFGMSG 1970
Query: 873 TNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN--- 929
TNAH+VLQ Y+ +NI ++ + PY+++ LSAKT SL+++++ + + L +
Sbjct: 1971 TNAHVVLQSYVPEESENILPSS-LKEKPYYLLALSAKTPESLQQRIRDLKVMLEREQDFR 2029
Query: 930 TVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKF 989
+ + N YTLM+GR HFQYR A+++S+ + + ++ + N + N KG V+ F
Sbjct: 2030 PLELANISYTLMEGRQHFQYRFAVVVSNTNDALHVLQHSANGGDM---PNLFKGTVTKDF 2086
Query: 990 TSNKIIDSYINKL 1002
T I I++L
Sbjct: 2087 TIRSAISRTIDEL 2099
|
Source: Ornithinibacillus scapharcae TW25 Species: Ornithinibacillus scapharcae Genus: Ornithinibacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|326205046|ref|ZP_08194893.1| 6-deoxyerythronolide-B synthase [Clostridium papyrosolvens DSM 2782] gi|325984802|gb|EGD45651.1| 6-deoxyerythronolide-B synthase [Clostridium papyrosolvens DSM 2782] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/902 (46%), Positives = 588/902 (65%), Gaps = 45/902 (4%)
Query: 117 NKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSS 176
+ +Y+Q DV D+ +M ++ G I GV+H AG++G +IL+ + +F VL
Sbjct: 1 GQVLYLQADVCDQARMKEGLSQAKERFGEIRGVVHTAGLAG-GGSILDKDISSFEEVLGP 59
Query: 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLN 236
KI GTI L+ L + LDF+CYFSSS+AILGDFGSCDYA+GNRF Y Y N
Sbjct: 60 KIKGTIILDELL-------CREPLDFICYFSSSAAILGDFGSCDYAVGNRFLMAYGHYRN 112
Query: 237 NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296
N+ K + INWPLW + + Y KSS Q+ L +G+ +F++LL Q
Sbjct: 113 NQQ-----PGKTVVINWPLWKEGGMGSKEGDNAEMYLKSSGQRFLETEEGIFMFDRLLAQ 167
Query: 297 DKIQYLVLSGELEKLNQIIN---NIAPKVSEN----------KKINNFNIEKFIENDIKN 343
+ IQ+LVL+G+ ++++ + N +P + + ++ ++E+ +E D+K
Sbjct: 168 NDIQHLVLAGQPSRVHRFLGLAGNQSPAQTPDIYKPSGKGRRTEMKGLSLEQCLEWDLKE 227
Query: 344 HICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLIT 403
N+L + ++ K +N AD+GFDS SLAEF+ IL+ Y ++I P++FF +ST+ERL
Sbjct: 228 LAGNVLKISRDKLDKEENFADFGFDSFSLAEFATILTGHYGIEITPAVFFGHSTIERLTQ 287
Query: 404 YFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNF-ILNKNTDINSE 462
YF H + FYR E + + + + + F +T
Sbjct: 288 YFFTEHQQAIQDFYR-------EDAAVQDVLQREPQAAASSRQRAGRFRFAAGSTPQGVP 340
Query: 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKW 522
E IA+IGMSGRFP A + W L + ++ I+EIP +DW+ YY +P + K NS+W
Sbjct: 341 EPIAVIGMSGRFPGADTVEGLWNNLKDGRECITEIPASRWDWQKYYGDPHQEDGKTNSRW 400
Query: 523 YGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVG 582
G I D+FD FFEISP EA+ MDPRQR LLQE+W ALEDAGYG QI +IGMFVG
Sbjct: 401 GGFISNADQFDSQFFEISPREAQVMDPRQRLLLQEAWKALEDAGYGAKQIKTNRIGMFVG 460
Query: 583 VEEGSNYQDRL-DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSL 641
VE+G +YQ + ++ ++TS +NAIL+ARLAYF++L GPVMAI+TACSS LVA H AC SL
Sbjct: 461 VEQG-DYQLLVKEKASVTSNNNAILAARLAYFLNLSGPVMAIDTACSSGLVAAHQACLSL 519
Query: 642 RQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 701
R HECDTAI+AG+NLM++P+AYI M+ AGMLS DGKC+ FD+RANGLVP EAV AVVLKR
Sbjct: 520 RGHECDTAIAAGINLMLTPQAYIGMSQAGMLSADGKCFAFDKRANGLVPGEAVAAVVLKR 579
Query: 702 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761
LSRA +DGDPI+A+I+G+ +NYDG+TNGITAP+G++QT L+K+VY + +NPE+I YI+T
Sbjct: 580 LSRAEADGDPIYAVIQGNAVNYDGRTNGITAPSGVAQTSLLKAVYDQFKVNPEEIEYIVT 639
Query: 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821
HGTGT+LGDPVEINAL+D FK T Q +CA+TS K+N GHTFAASGL+SLI+LV+++++
Sbjct: 640 HGTGTRLGDPVEINALYDAFKGYTSKQGYCALTSTKTNFGHTFAASGLLSLISLVEALRH 699
Query: 822 KIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881
+ IPASLHCE+EN+YI K SPFY+NK+ K W + K+R GAVSAFGMSGTN H+V++
Sbjct: 700 ETIPASLHCEQENDYINWKESPFYVNKAAKPWPKRDGKVRTGAVSAFGMSGTNVHMVVRS 759
Query: 882 YISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLM 941
Y + +F PY+++VLSAKT+ +L+EK++ ++ L +N + YT +
Sbjct: 760 YSGKD-----TGSFQEQPPYYLLVLSAKTEDALQEKIQDMITVL-QNKGQDLLRISYTGL 813
Query: 942 QGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINK 1001
+GR HF +RCAI+I ++ + + S+E++ N KG V F ++ Y
Sbjct: 814 EGRQHFNHRCAIVIQDHDDAIYVWKQA-GSRERL--PNLFKGKVPQDFKGQNVVQQYAQD 870
Query: 1002 LF 1003
+
Sbjct: 871 ML 872
|
Source: Clostridium papyrosolvens DSM 2782 Species: Clostridium papyrosolvens Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|394993052|ref|ZP_10385815.1| DfnG, partial [Bacillus sp. 916] gi|393806094|gb|EJD67450.1| DfnG, partial [Bacillus sp. 916] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1024 (44%), Positives = 621/1024 (60%), Gaps = 72/1024 (7%)
Query: 1 MPETQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDF 60
+PET + V+ E+ ++ I+ + +EL S+MY G IR+ + +K +
Sbjct: 1634 LPETDTAAVYFEQ--KGPLEKLIHNVCEELHSESFRSVMYSGE--IRHVMEMKQTDIAPV 1689
Query: 61 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN--- 117
+ IK G TYLITGG G LG+LF+ Y K LIL+GRS + K+K+
Sbjct: 1690 EKRVIKSGKTYLITGGCGGLGLLFAGYFAEKGPVTLILTGRSAAAGPVLNKIKRLEESGA 1749
Query: 118 KAIYIQVDVSDKLKMISEINSIIN-NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSS 176
K Y+Q D +D+ +M + + GPI GV+H AG+ G T +ILE + + F VLS
Sbjct: 1750 KVFYVQADAADQAQMEKGLQEVKEKGCGPIHGVIHAAGLQG-TESILEKDLQTFQQVLSP 1808
Query: 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLN 236
K GT L+ L + LDF C FSSSSAILGDFGSCDYAMGNRFQ + + +
Sbjct: 1809 KADGTAVLDQVL-------SREPLDFFCCFSSSSAILGDFGSCDYAMGNRFQMAFVHHRD 1861
Query: 237 NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296
+ K + INWPLW +G E TD Y KSS Q+ L+ +GL+ FE LL+Q
Sbjct: 1862 KLVSLGLRSGKSLAINWPLWKEGGMHVGTAESTDMYLKSSGQRYLYTEEGLEAFETLLVQ 1921
Query: 297 DKIQYLVLSG---ELEKLNQI----------INNIAPKVSENKKINNFNIEKFIENDIKN 343
QYLVL+G ++ QI +N P ++ F +E+ + D+K
Sbjct: 1922 PSSQYLVLAGFPSRAKRFLQIDQGERPISGSVNRNVPFSGRRSEMKGFTLEECVSWDVKE 1981
Query: 344 HICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLIT 403
+L K+ + NLAD+GFDSISLAEF+ LS Y +++ P++FF +STLE+++
Sbjct: 1982 LAAGLLKIDKNRLTDADNLADFGFDSISLAEFASSLSAHYGIEVTPALFFGHSTLEKVVR 2041
Query: 404 YFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTD-INSE 462
YF+ H + M Y K P ES + S+ + + + LN T+ +
Sbjct: 2042 YFLTEHQSVMEHVYEEKKP---ESADQSVFEKAGTEKRKKQRGRNK---LNAGTEGSQAA 2095
Query: 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKW 522
+ IAIIGMSGRFP AR +E W IL KDV++ + +K F +SKW
Sbjct: 2096 DSIAIIGMSGRFPQARTADELWDILFQEKDVVAPVAKKGF---------------TSSKW 2140
Query: 523 -YGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 581
G++PG DEFDPLFFEISP EAE MDP+QR LLQE+W ALEDAGYG + I Q IGMFV
Sbjct: 2141 KLGAVPGADEFDPLFFEISPREAETMDPKQRLLLQEAWRALEDAGYGASHIKQQTIGMFV 2200
Query: 582 GVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSL 641
G EEG + D+ N+TS HN IL+ARLAY ++L GPVMAINTACSS LV+ H A SL
Sbjct: 2201 GAEEGDYHLLTRDKGNVTSHHNGILAARLAYHLNLSGPVMAINTACSSGLVSVHQAVLSL 2260
Query: 642 RQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 701
+ EC TA++AGVN+M +P+ + + AGMLS +GKC+ FD+RA+G+VP EA AVVLK
Sbjct: 2261 QNKECTTAVAAGVNIMNTPDFFETIDKAGMLSENGKCFAFDKRADGMVPGEAAAAVVLKP 2320
Query: 702 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761
L A DGDPI+ +IR SGINYDGKTNGITAP+G++QT L+ SVY + +NPEDI YI+T
Sbjct: 2321 LREAEKDGDPIYGVIRASGINYDGKTNGITAPSGVAQTRLLTSVYDRGRINPEDIEYIVT 2380
Query: 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821
HGTGTKLGDPVEINAL+D F T + FCA+TS K+NIGHTFAASG+VSLI+L+Q+
Sbjct: 2381 HGTGTKLGDPVEINALYDAFSAYTNEEAFCALTSIKTNIGHTFAASGIVSLISLLQAFSR 2440
Query: 822 KIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881
++IP SLHC EN YI + SPFY+NK K W ++ K R+GAVSAFGMSGTNAH+V++
Sbjct: 2441 EMIPVSLHCSGENRYINWEKSPFYVNKRGKPWPSLPGKNRMGAVSAFGMSGTNAHVVMES 2500
Query: 882 YISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLF-----LRKNNTVCIENF 936
Y ++ + P +++ LSAKT+ +L+EK+++++ + L++N+ +
Sbjct: 2501 Y-------KRSASPHRDAPAYLLTLSAKTEEALQEKIEEMITWAENGGLKEND---LAQL 2550
Query: 937 VYTLMQGRHHFQYRCAIIISSIEEVVKIINDT-LNSKEKILHTNYLKGIVSHKFTSNKII 995
YTL++GRHHF +R AI++ ++ V + LN H G V F + I
Sbjct: 2551 SYTLLKGRHHFNHRAAIVVQDADDAVYVWKQAKLNEH----HPYVFSGKVPQHFAGRQHI 2606
Query: 996 DSYI 999
+I
Sbjct: 2607 QEHI 2610
|
Source: Bacillus sp. 916 Species: Bacillus sp. 916 Genus: Bacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|345022706|ref|ZP_08786319.1| hypothetical protein OTW25_15521 [Ornithinibacillus scapharcae TW25] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1029 (45%), Positives = 644/1029 (62%), Gaps = 60/1029 (5%)
Query: 1 MPETQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKD- 59
+P T+++I+ A++ +W ++KELQ K S+ Y G + R I +KD
Sbjct: 331 IPGTKVNIIIAKR-EEREFVDWAERMWKELQAAKAESVWYEG--IHRKVSRILPTHMKDN 387
Query: 60 FKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYK--KLKKFNN 117
+N +K+GG YL+TGG G LGM+FS +L KY LIL RS S K +L
Sbjct: 388 HRNVPLKKGGVYLLTGGVGGLGMIFSRWLAQKYQAKLILVNRSSKESKKEKLQELIDIGA 447
Query: 118 KAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSK 177
+ +Y DVS+ ++ I + G +DGV+H AGI G S IL+ K + L K
Sbjct: 448 EVVYYSADVSNTEQLKQAIKAGKERFGKLDGVIHAAGIEGQGS-ILQKTVKEYLRCLGPK 506
Query: 178 ISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNN 237
I GT+AL AL Q K+DF+CYFSSSSAI+GDFG+CDYA+GNRF Y + +
Sbjct: 507 IQGTLALEQAL-------QGEKIDFICYFSSSSAIIGDFGNCDYAVGNRFLMSYGGHRHQ 559
Query: 238 KNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297
Y K + INWPLW + + E + Y KSS Q+ L +G ++FE+LL Q
Sbjct: 560 AG----YPGKTVVINWPLWKSEGMGFADEEGSKMYLKSSGQRFLESEEGTEIFEKLLQQT 615
Query: 298 KIQYLVLSGELEKLNQII----------------NNIAPKVSENKK--INNFNIEKFIEN 339
IQ+LV++G E++N+ + +N+ + + ++ + +++IE+ +
Sbjct: 616 NIQHLVMTGNKERINKFLGIEEETKREVKQEIKKHNVMVQSGKGRRPEMKDWSIEQCVLW 675
Query: 340 DIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLE 399
++K+ + IL ++ +NLAD+GFDSISL +F +SK Y LDI P +FF Y TL+
Sbjct: 676 ELKDAVRQILKIPIEKLEIEENLADFGFDSISLIDFGDSISKRYKLDITPDVFFGYPTLK 735
Query: 400 RLITYFIKNHNNTMIKFY-RNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTD 458
RL Y + + M +FY K + S + N +N N +K + KN
Sbjct: 736 RLSGYLLDKYAAEMEEFYSETKEEIPDTSNKVLNPTHNLDRKNKRNSRRKR---IGKNPR 792
Query: 459 INSE-ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNK 517
I E + IAIIGMSGRFP AR+I+E W ILI ++ I E P + +W +
Sbjct: 793 IKEEIDSIAIIGMSGRFPEARSIDELWSILIEGREAIHEAPAERTEW---------NEGD 843
Query: 518 INSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKI 577
K +G +PG+ EF+P FFEISP EA MDPRQR LLQE+W ALEDAGYG ++KI
Sbjct: 844 GRGKKFGVVPGVSEFEPSFFEISPREAISMDPRQRLLLQETWRALEDAGYGAKSFDDEKI 903
Query: 578 GMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIA 637
GMFVG+EEG D ++TS HNAIL+ARL+YF++L GP MAINTACSSSLVA H A
Sbjct: 904 GMFVGIEEGDYTALVQDDASITSNHNAILAARLSYFLNLDGPNMAINTACSSSLVALHQA 963
Query: 638 CQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 697
CQSLR ECDTAI AG NLM +P +YI+M+ AGMLS D +CY FD+RANG+VP+EA+ V
Sbjct: 964 CQSLRNEECDTAIVAGANLMTTPGSYISMSKAGMLSEDSRCYAFDKRANGMVPAEAIAVV 1023
Query: 698 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 757
VLKRLS A + + I+A I GSGINYDGKTNGITAP+G SQ++LI+ VY++ N+NPE+++
Sbjct: 1024 VLKRLSNAEENNNSIYATIVGSGINYDGKTNGITAPSGPSQSKLIREVYERYNINPENMD 1083
Query: 758 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQ 817
YI+THGTGTKLGDPVEINAL D +K T K+CA+TS K NIGHT AASG+VSLI+LV
Sbjct: 1084 YIVTHGTGTKLGDPVEINALADAYKQYTQKSKYCALTSVKPNIGHTLAASGIVSLISLVM 1143
Query: 818 SIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHI 877
S+K++ IPAS++CE+ N+YI SPFY+N+ NK+W N K R+ AVS+FGMSGTNAH+
Sbjct: 1144 SLKHETIPASINCEQLNDYIRWDASPFYVNRVNKEWKETNGKKRLSAVSSFGMSGTNAHV 1203
Query: 878 VLQEYIST-NFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQI-LLFLRKNNTVCIE- 934
V+Q Y + +N N I PY+++ LSAKT SL++K+ + +LF +K + E
Sbjct: 1204 VVQSYSKRDDSENPANQHRI---PYYLLALSAKTSESLQQKIHDLKVLFEQKQDMGPAEL 1260
Query: 935 -NFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNK 993
N YTLM+GR HFQ+RCA+++S ++ ++++N + I N KGIVS FT
Sbjct: 1261 ANISYTLMEGRQHFQHRCAVVVSDTKDAIQVLNQVEGNGNGI---NIFKGIVSRDFTVQP 1317
Query: 994 IIDSYINKL 1002
I IN+L
Sbjct: 1318 SISKSINEL 1326
|
Source: Ornithinibacillus scapharcae TW25 Species: Ornithinibacillus scapharcae Genus: Ornithinibacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1005 | ||||||
| UNIPROTKB|Q4KCD4 | 4163 | rzxE "Polyketide synthase RzxE | 0.949 | 0.229 | 0.406 | 9.9e-195 | |
| UNIPROTKB|Q4KCD6 | 4039 | rzxD "Polyketide synthase RzxD | 0.834 | 0.207 | 0.329 | 9.8e-120 | |
| UNIPROTKB|Q4KCD7 | 4937 | rzxC "Polyketide synthase RzxC | 0.842 | 0.171 | 0.307 | 4.3e-102 | |
| UNIPROTKB|Q4KCD3 | 2541 | rzxF "Polyketide synthase RzxF | 0.596 | 0.235 | 0.315 | 1.7e-101 | |
| UNIPROTKB|Q4KCD8 | 6675 | rzxB "Polyketide synthase/nonr | 0.582 | 0.087 | 0.330 | 6.3e-87 | |
| UNIPROTKB|O53490 | 4151 | pks12 "Probable polyketide syn | 0.479 | 0.116 | 0.340 | 5.1e-87 | |
| UNIPROTKB|Q10977 | 1876 | ppsA "Phthiocerol synthesis po | 0.416 | 0.223 | 0.400 | 1.1e-81 | |
| UNIPROTKB|Q7TXM0 | 1876 | ppsA "Phthiocerol/phenolphthio | 0.416 | 0.223 | 0.398 | 5e-81 | |
| UNIPROTKB|Q10978 | 1538 | ppsB "Phthiocerol synthesis po | 0.411 | 0.269 | 0.386 | 3.2e-80 | |
| UNIPROTKB|Q7TXL9 | 1538 | ppsB "Phthiocerol/phenolphthio | 0.411 | 0.269 | 0.386 | 3.2e-80 |
| UNIPROTKB|Q4KCD4 rzxE "Polyketide synthase RzxE" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1902 (674.6 bits), Expect = 9.9e-195, P = 9.9e-195
Identities = 411/1012 (40%), Positives = 599/1012 (59%)
Query: 20 KNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGR 79
+ W+ L+++L S +Y R L I + + + + Q T LITGG G
Sbjct: 1210 RRWLQRLWRQLSGQPTGSRLYRDTRSQRPVL-IAAPVEAAAEPLALDQLNTLLITGGLGE 1268
Query: 80 LGMLFSDYLINKY------STNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKL 130
LG+L + L N+ L+L+GRS L++ ++ ++ + ++Q D +D+
Sbjct: 1269 LGLLLAGELSNRARLRTDGQLQLLLNGRSPLSATTRARIDALSHEHCRVFHVQADCADRP 1328
Query: 131 KMXXXXXXXXXXXGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN 190
+ GPIDG++H AG+ + ++L ++ + F +VL++KI T L+ L
Sbjct: 1329 ALTAALAPVLAQSGPIDGLIHAAGLQA-SGSVLASSPEAFAAVLNAKIGATQVLDQVLAE 1387
Query: 191 TILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXXXXXXXXLIT 250
L L +C+FSSSSA+LGD G+C YAM NRFQ ++
Sbjct: 1388 QPLAL-------ICHFSSSSALLGDMGACSYAMANRFQQAYARYVQRGRARR-----VVA 1435
Query: 251 INWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEK 310
INWPLW +G E T+FY KSS Q++L +GL L Q++ D Q LVL+G+ +
Sbjct: 1436 INWPLWREGGMALGERESTEFYLKSSGQRMLESAEGLALLRQIVGSDIPQVLVLAGQPAR 1495
Query: 311 LNQIINNI-APKVSXXXXXXXX----------------XXXXXXXXDIKNHICNILNTKK 353
L Q++ I P D++ L ++
Sbjct: 1496 LQQLLEGINQPTAKATAGQPATVLPRAPAHSRPELKGLSLEQSLAWDLRELASRPLQAER 1555
Query: 354 SEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTM 413
+ + NLAD+GFDSISLAE++ +L++ + L + P +FFS+STL +L + + H +
Sbjct: 1556 QSLEEECNLADFGFDSISLAEYAGLLNRHFGLTLTPEVFFSHSTLAKLAAHLLAQHRQAV 1615
Query: 414 IKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGR 473
Y +P+ T + + ++ + + + + E +AIIG+SGR
Sbjct: 1616 EACYL--HPV-TRDPQAEPEAQPETQPEAQPEAQPAPLTSSASASAPATEAMAIIGISGR 1672
Query: 474 FPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFD 533
FP AR +E W++L +D++SEIP + +DW+ +Y +P ++ K W GS+PGIDEFD
Sbjct: 1673 FPGARTTDELWQVLAEGRDMVSEIPPERYDWREHYGDPRENPTKTRCIWMGSVPGIDEFD 1732
Query: 534 PLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRL 593
PLFFEISP EA +DPRQR LLQESW LEDAG GP Q+A Q++GMFVGVEEG ++Q
Sbjct: 1733 PLFFEISPREATHLDPRQRLLLQESWNVLEDAGIGPRQLATQRVGMFVGVEEG-DFQRLA 1791
Query: 594 DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAG 653
+ +LTS+HN IL++RLAYF++L GP MAINTACSS+LVA H A SLR EC+ AI+AG
Sbjct: 1792 GEESLTSSHNGILASRLAYFLNLTGPTMAINTACSSALVALHQAASSLRNQECEMAIAAG 1851
Query: 654 VNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIH 713
VNL+ S +A+I MT AGMLSPDGKC+ FD RANG+VP EAV V+LK L+RA +DGD I+
Sbjct: 1852 VNLIFSADAFIGMTQAGMLSPDGKCFAFDHRANGMVPGEAVCCVLLKPLARAEADGDRIY 1911
Query: 714 AIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773
+R SG+NYDGKTNGITAP+G+SQ L++ VY+++ ++ + ++YI+THGTGT+LGDPVE
Sbjct: 1912 GTLRASGLNYDGKTNGITAPSGVSQQRLLEEVYRRAGIDTQAVDYIVTHGTGTQLGDPVE 1971
Query: 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 833
INAL+D F + CA+TS K+N+GHTFAASGLVS+I+L+Q+++++ IPASLHCE+E
Sbjct: 1972 INALNDAFGGNSPGH--CALTSTKTNLGHTFAASGLVSVISLLQALRHETIPASLHCEQE 2029
Query: 834 NNYIILKNSPFYINKSNKKWNTVN-EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKN 892
N+YI + SPFY+NK+NK W ++ R+GAVSAFGMSGTNAH+V+Q Y +
Sbjct: 2030 NHYIQWQQSPFYVNKANKPWPQAGRDRERLGAVSAFGMSGTNAHVVVQSYSQ------RA 2083
Query: 893 NTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN--TVCIENFVYTLMQGRHHFQYR 950
+ P +++VLSAKT +L+EK Q+ + L + + +TL++GRHHF+YR
Sbjct: 2084 DDAALRRPCYVLVLSAKTAEALEEKAAQLNVALEQGGYRDAQMPAISHTLLEGRHHFRYR 2143
Query: 951 CAXXXXXXXXXXXXXNDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINKL 1002
A L +++ N G V F K + YI +L
Sbjct: 2144 LALVAADLEETRYGLQRYLAGEKR---PNLFAGEVERDFAPRKTVVRYIEQL 2192
|
|
| UNIPROTKB|Q4KCD6 rzxD "Polyketide synthase RzxD" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1196 (426.1 bits), Expect = 9.8e-120, P = 9.8e-120
Identities = 293/890 (32%), Positives = 448/890 (50%)
Query: 66 KQGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQV 124
K G YLITGG G LG LF+ + + S LIL+GRS L + + N+ Y +
Sbjct: 1131 KDRGVYLITGGLGGLGRLFAQAIAARVSDATLILTGRSALAANGLAGIDAGRNRVYYQSL 1190
Query: 125 DVSDKLKMXXXXXXXXXXXGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DVSD + +DGVLH AG+ S ++ VL++K++G+ L
Sbjct: 1191 DVSDAQAVQRLIDGIVAEHNGLDGVLHCAGVIR-DSLLINKQDDELRQVLAAKVAGSRNL 1249
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXXXXX 244
+ A L DF FSS + ++G+ G DYA N F
Sbjct: 1250 DLATAGLAL-------DFWICFSSGTGVVGNVGQADYAAANAFVDHYAAYRQQLTAQGLR 1302
Query: 245 XXXLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVL 304
+ INWPLW ++ + +S+ + N G+ Q + Q LV+
Sbjct: 1303 QGQSLAINWPLWKEGGMQV-DAATAQHMAQSTGMVAMPSNAGIHALRQCVALALPQVLVM 1361
Query: 305 SGELEKLNQIINNIA------PKVSXXXXXXXXXXXXXXXXDIKNHICNILNTKKSEIYK 358
G E + ++N P+ + + + +I
Sbjct: 1362 HGRREPMTALVNAATAAALPEPQPQALSAQPAAPLTEALQRALIEQVSAQMKIPAGDIRL 1421
Query: 359 NKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMI-KF- 416
+ + YGFDSISL + L + + L++ P+IFF ++T+ R Y + H + +F
Sbjct: 1422 DVEFSQYGFDSISLTTLANTLKQQWRLNLAPTIFFEHATVGRFSAYLEREHQAALAPRFA 1481
Query: 417 -YRNKYPLKTESKNISILYDNKINENYENVSK-KSNFILNKNTDINSEELIAIIGMSGRF 474
+ P L + VS + N+ I+ E IA+IG+SGRF
Sbjct: 1482 PQASAAPAAAAQPRQQALPTAAPGPR-DGVSGVRQTPAANR---IDDE--IAVIGISGRF 1535
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P A ++ +F+ L + +D ISEIP +DW+ YY +P + +K N KW G I G+D FDP
Sbjct: 1536 PMAEDVEQFFHNLKDGRDCISEIPANRWDWREYYGDPHREVDKTNVKWGGFIHGVDHFDP 1595
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLD 594
LFF ISP EA+ MDP+QR L+ WLA+EDAGY +A G+FVG + Y +
Sbjct: 1596 LFFAISPREAQLMDPQQRLLMTYVWLAIEDAGYASADLAGSDTGIFVGTGV-TGYSSLIA 1654
Query: 595 QVNL-------TSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECD 647
+ + T+ ++ R+++ +D GP + TACSSSLVA H A Q++ +C
Sbjct: 1655 KAGIPVEGYSATAMVPSVGPNRMSFLLDFHGPSEPVETACSSSLVAIHRAVQAIHSGDCA 1714
Query: 648 TAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707
A+ GVN +I+PEA I+ + AGML+ DG+ F +ANG E V +VLK+ ++A +
Sbjct: 1715 MAVVGGVNTLIAPEAQISFSKAGMLALDGRSKTFSAQANGYARGEGVGMIVLKKRAQAEA 1774
Query: 708 DGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 767
DGD I+A+IR + N+ GK N +TAPN +Q EL+KS Y+K+ ++P + YI HGTGT+
Sbjct: 1775 DGDNIYALIRSTAENHGGKANSLTAPNPRAQAELLKSAYRKAGVDPRSVGYIEAHGTGTE 1834
Query: 768 LGDPVEINALHDVFK-------NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 820
LGDP+EIN L F+ N+ Q +C + S KSN+GH A+G+ +I ++ +K
Sbjct: 1835 LGDPIEINGLKMAFRELNQELGNEALAQGYCGVGSVKSNMGHLELAAGIAGVIKVLLQLK 1894
Query: 821 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV-----NEKLRIGAVSAFGMSGTNA 875
+K + SLHCE+ N YI L NSPFY+ + N+ W + N+ R VS+FG G NA
Sbjct: 1895 HKTLFKSLHCEQLNPYIELDNSPFYVVQHNRPWAAIQDRQGNQLPRRAGVSSFGFGGANA 1954
Query: 876 HIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 925
H++L+EY + + + VLSA+T L+E ++++ F+
Sbjct: 1955 HVLLEEYRAPQVDRP-----LPATGARAFVLSARTPERLREAARRLVAFI 1999
|
|
| UNIPROTKB|Q4KCD7 rzxC "Polyketide synthase RzxC" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1031 (368.0 bits), Expect = 4.3e-102, Sum P(2) = 4.3e-102
Identities = 280/911 (30%), Positives = 447/911 (49%)
Query: 66 KQGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNN---KAIY 121
K G YLITGG G LG++F+ + + LIL GRS L+S +L+ + +Y
Sbjct: 2849 KDRGVYLITGGAGGLGLIFARTIAEQCRDVTLILLGRSHLDSRQQAQLQAIRDLGAAVVY 2908
Query: 122 IQVDVSDKLKMXXXXXXXXXXXGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGT 181
+D++D + G ++GVLH AG++ + + ++ V ++K+ GT
Sbjct: 2909 QPLDLTDAQGLERLIAQICTAHGGLNGVLHGAGVNR-DRLLAQKTPQDVVEVFAAKVLGT 2967
Query: 182 IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXX 241
L+ A L DF FSS SA+LG G DYA N F
Sbjct: 2968 DLLDRACRRLYL-------DFFVLFSSCSAVLGSVGQADYAAANAFIDQFAELRNLRVEQ 3020
Query: 242 XXXXXXLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301
+++N+PLW + +I +Q + + + G++ + L +
Sbjct: 3021 GLRFGHTLSLNFPLWRDGGMQISAADQAHIR-QQTGMAPMQSVHGIQALQLGLSAGLARL 3079
Query: 302 LVLSGELEKLNQIINNIAPKVSXXX------XXXXXXXXXXXXXDIKNHICNILNTKKSE 355
LV+ G+L ++ P + +K C + +
Sbjct: 3080 LVIEGDLAQIRGQFGAAEPVDAQPAPGLPRVTVDPAQLSAAVLERLKAVFCAVTKLPPAR 3139
Query: 356 IYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLI--TYFIKNHNNTM 413
+ + L YG DSI + +R L + +S M + ERL+ T F + H+
Sbjct: 3140 VECDAPLEHYGIDSIMIIRLNRALEERFSA--MTQL----RPAERLLSKTLFFEYHSLNA 3193
Query: 414 IKFYRNKYPLKTESKNISILYDNKINEN---YENVSKKSNFILNKNTDINSEELIAIIGM 470
+ Y L E + +++ E V + S + + + + E IAIIG+
Sbjct: 3194 LSAY-----LVAEHQRACLIWSGLAEEAPIAAPAVGQASP--VPASMAMAAAEPIAIIGI 3246
Query: 471 SGRFPAARNINEFWKILINNKDVISEI-PEKIFDWKL--YYENPIKSSNK---INSKWYG 524
SGR+P A N++E+W+ L +D I+EI P++ W L +Y + + + K SKW G
Sbjct: 3247 SGRYPQAANLDEYWRNLKAGRDSITEIAPQR---WPLEGFYVDSVAEALKQARSYSKWGG 3303
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ---KIGMFV 581
I G +FDPLFF ISP EA MDP++R LQ W +LEDAG +A + +G+F
Sbjct: 3304 FIDGFADFDPLFFNISPREAVNMDPQERLFLQSCWQSLEDAGITKADLATKYQGNVGVFA 3363
Query: 582 GVEE-GSN-YQDRL-DQVNLTSTHNAILSA--RLAYFMDLKGPVMAINTACSSSLVATHI 636
G+ + G Y L +Q L + S R++Y +DL GP ++T CSSSL A H
Sbjct: 3364 GITKTGYGLYGPALREQGQLVFPRTSFGSTANRVSYVLDLNGPSEPVDTMCSSSLTALHR 3423
Query: 637 ACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696
AC+SLR+ EC A + GVNL + P Y+ +++ MLS DG+C F E NG VP E V +
Sbjct: 3424 ACESLRRGECRMAFAGGVNLYLHPSNYVELSAGQMLSKDGRCRSFGEGGNGFVPGEGVGS 3483
Query: 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 756
++LK LS+AL+D D IH +IR +N+ GKTNG T PN +Q ++I+ ++ L+ I
Sbjct: 3484 LLLKPLSQALADRDNIHGVIRAVAVNHGGKTNGYTVPNPQAQAKVIRLAIDQAGLDASQI 3543
Query: 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 816
+YI HGTGT+LGDP+E++ L F CA+ S K+NIGH AA+G+ + ++
Sbjct: 3544 SYIEAHGTGTELGDPIEVSGLTQAFALDQVALGHCALGSVKANIGHLEAAAGIAGVSKVI 3603
Query: 817 QSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAH 876
+K++ + SLH N + L +PFY+ ++ W N RI VS+FG G NAH
Sbjct: 3604 LQLKHRQLVPSLHAATLNPNLRLDATPFYLQQTLDDWQPANAGPRIAGVSSFGAGGANAH 3663
Query: 877 IVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVC---I 933
++LQE+ ++ + + ++ +++LSA+ L++ + +L ++ + +
Sbjct: 3664 VLLQEH--DEYRPMPH-----ASDAEVILLSARDADRLRDYAQALLAYIEARPGLSGADL 3716
Query: 934 ENFVYTLMQGR 944
N YTL GR
Sbjct: 3717 ANLAYTLQHGR 3727
|
|
| UNIPROTKB|Q4KCD3 rzxF "Polyketide synthase RzxF" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 821 (294.1 bits), Expect = 1.7e-101, Sum P(2) = 1.7e-101
Identities = 198/628 (31%), Positives = 340/628 (54%)
Query: 342 KNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERL 401
K + L +I + + YG DSI L E +R L + + + ++ + Y T+ L
Sbjct: 1385 KQLLSTTLKRPLEKIDSDASFERYGADSIMLTELTRQLERLFG-SLPNTLLYEYQTVREL 1443
Query: 402 ITYFIKNHNNTMIKFYRNK-YPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDIN 460
YFI H + ++ R + + S++ + + N + + N
Sbjct: 1444 SAYFIGQHAQRLDQWLRPEGAKASAPGEETSLIAQAPVRQRARNRQQCETPAVAGN---- 1499
Query: 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 520
S +L AIIG+SGR+P A ++ FW L +D+ISE+P +D + Y++ +K
Sbjct: 1500 SRDL-AIIGISGRYPGAADLETFWHKLAGGEDLISEVPSARWDHQAYFDPARDRFDKTYC 1558
Query: 521 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIAN---QKI 577
KW G + G+++FDPLFF +SP EA ++P R L+ W LE AG QI Q++
Sbjct: 1559 KWGGFLEGVEDFDPLFFNLSPREAHIINPNDRLFLETCWNLLESAGLTRQQIQQRYQQQV 1618
Query: 578 GMFVGV--EEGSNYQDRLDQVNLTS-THNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
G+FVGV ++ ++ L + +L S T + ++ R++YF D +GP +AI+T CSSS+ A
Sbjct: 1619 GVFVGVMYQQYQAFESDLVRESLVSVTSYSAIANRVSYFFDFQGPSLAIDTMCSSSISAI 1678
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694
H A ++LR +C AI+ GVNL + P+ YI ++ +L F + +G +P+E V
Sbjct: 1679 HAAGEALRNGDCRLAIAGGVNLTLHPKKYIGLSVGQVLGSHAGSRSFAD-GDGYLPAEGV 1737
Query: 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 754
AV+LK L+ A DGDPI A+I+ + +N+ G T+G + P+ Q LI S +K++ ++P
Sbjct: 1738 GAVLLKTLADAERDGDPILAVIKSTAVNHGGHTHGFSVPSAKLQAALIDSNFKRAGIDPC 1797
Query: 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 814
++Y+ + G+++GD +E++AL VF + CAI S KSNIGH AASG+ +L
Sbjct: 1798 TLSYVESAANGSEMGDAIELSALSRVFSAAGVAPQSCAIGSVKSNIGHAEAASGMSALSK 1857
Query: 815 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW-------NTVNEKL-RIGAVS 866
LV ++++ + SL + N + +SPF + ++ +W + V + + R +S
Sbjct: 1858 LVLQLQHRQLAPSLLLGELNPKLDFAHSPFVLQRTLTEWPQPVLEIDGVEQPVPRRACLS 1917
Query: 867 AFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNP--YHMVVLSAKTKISLKEKMKQILLF 924
AFG G+NAH++++EY S ++ +S P +V LSA + +L++ ++++
Sbjct: 1918 AFGAGGSNAHLIIEEYSSAPIPDLA-----ASEPGLLQIVPLSAHSSAALQQGLERLARH 1972
Query: 925 LRKNNTVCIENFVYTLMQGRHHFQYRCA 952
L ++ V +++ +TL GR R A
Sbjct: 1973 LDRHPQVRLQDLAHTLQNGREAMPLRLA 2000
|
|
| UNIPROTKB|Q4KCD8 rzxB "Polyketide synthase/nonribosomal peptide synthetase hybrid RzxB" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 881 (315.2 bits), Expect = 6.3e-87, Sum P(3) = 6.3e-87
Identities = 211/638 (33%), Positives = 342/638 (53%)
Query: 341 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 400
+K H + ++ I + YG S+ + E ++ L++ + ++ ++FF + ++
Sbjct: 1693 LKQHFSKVSAIPEASIDSLETFDRYGLTSLMITELNQRLAQGFG-ELSSTLFFEHQSIHA 1751
Query: 401 LITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDIN 460
L +F H + R++ L ++ S + ++ ++
Sbjct: 1752 LAIWFAAEHPS------RSRQLLGLQAPVASAAAPRQTASG-PDIERRQA---------- 1794
Query: 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 520
+E IAIIG++GRFP A +I FW L N D ISEIP + + YY KINS
Sbjct: 1795 CDEPIAIIGLAGRFPGAPDIERFWDNLKNGVDSISEIPAERWAHLQYYSRDRSLKGKINS 1854
Query: 521 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ---KI 577
KW G I +D FDPLFF ISP +AERMDP++R L+ +W LEDAGY + K+
Sbjct: 1855 KWGGFIDDVDRFDPLFFNISPRDAERMDPQERIFLETAWHTLEDAGYDRAALQRHYQGKM 1914
Query: 578 GMFVGVEEGSNYQDRLDQVNLTSTHNAI------LSARLAYFMDLKGPVMAINTACSSSL 631
G+FVGV G Y T +A+ ++ R++Y D GP MAI+T CSSSL
Sbjct: 1915 GVFVGVMHGE-YLLYTRSAAADCTDDAVDASFGSIANRVSYVFDCTGPSMAIDTICSSSL 1973
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPS 691
A H+A QSL++ EC A++ GVNL + P Y + M S DG+C F E +G VP
Sbjct: 1974 TALHLAVQSLKRGECRVALAGGVNLSLHPNKYFIQSQLTMSSSDGRCRSFGEGGDGFVPG 2033
Query: 692 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNL 751
E AV+LK LS+A +DGD I+ +IR + +N++GKT+G T P+ +Q +I +K+ +
Sbjct: 2034 EGAGAVLLKPLSQAQADGDNIYGVIRATSVNHNGKTHGYTVPSPNAQGAMIAESLEKAGM 2093
Query: 752 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN-------QKFCAITSNKSNIGHTF 804
NP +++YI HGTGT LGDP+EI+ L F ++ + CA+ S KSNIGH
Sbjct: 2094 NPRELSYIEAHGTGTALGDPIEISGLQQGFARRSAALGSEPAPAQQCALGSAKSNIGHLE 2153
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT--VN----- 857
+A+G+ + ++ +K++ + SLH + N I SPF+I + ++W +N
Sbjct: 2154 SAAGIAGVAKVLLQLKHRQLAPSLHSSRLNPGIAFDQSPFHIPQQLQEWRRPRLNLDGRE 2213
Query: 858 -EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKE 916
E +VS+FG G+N H+++ +Y++ + + ++ P ++VLSA+T L++
Sbjct: 2214 REYPLAASVSSFGSGGSNGHVIIAQYLAP-----ERDEPVAGQPA-IIVLSARTPSQLQQ 2267
Query: 917 KMKQILLFLRKNNTVC----IENFVYTLMQGRHHFQYR 950
+++++ FL++ + + +TL QGR +YR
Sbjct: 2268 QVERLQQFLQRREQQGQLPRLADLAFTLQQGREALEYR 2305
|
|
| UNIPROTKB|O53490 pks12 "Probable polyketide synthase pks12" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 5.1e-87, Sum P(4) = 5.1e-87
Identities = 169/497 (34%), Positives = 291/497 (58%)
Query: 461 SEELIAIIGMSGRFPAARNI-NEFWKILINNKDVISEIP-EKIFDWK-LYYENPIKSSNK 517
SE+ IAI+GM+ R+P N ++ W +LI +DV+SE P ++ +D LY +P ++
Sbjct: 2055 SEDPIAIVGMACRYPGGVNSPDDMWDMLIQGRDVLSEFPADRGWDLAGLYNPDP-DAAGA 2113
Query: 518 INSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKI 577
++ G + G+ +FDP FF + P EA MDP+ R LL+ SW ALE AG P +
Sbjct: 2114 CYTRTGGFVDGVGDFDPAFFGVGPSEALAMDPQHRMLLELSWEALERAGIDPTGLRGSAT 2173
Query: 578 GMFVGVEE---GSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
G+F GV G + ++ LT +++ S R+AY + L+GP ++++TACSSSLVA
Sbjct: 2174 GVFAGVMTQGYGMFAAEPVEGFRLTGQLSSVASGRVAYVLGLEGPAVSVDTACSSSLVAL 2233
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694
H+A SLR ECD A++ GV + +P+ ++ + LSPDG+C F A+G SE
Sbjct: 2234 HMAVGSLRSGECDLALAGGVTVNATPDIFVEFSRWRGLSPDGRCKAFAAAADGTGFSEGG 2293
Query: 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 754
+VL+RLS A G P+ A++ GS +N DG +NG+TAPNG SQ ++++ + L+
Sbjct: 2294 GMLVLQRLSDARRLGHPVLAVVVGSAVNQDGASNGLTAPNGPSQQRVVRAALANAGLSAA 2353
Query: 755 DINYIITHGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSLI 813
+++ + HGTGT LGDP+E AL + +++ + + S KSN+GHT AA+G+ +I
Sbjct: 2354 EVDVVEGHGTGTTLGDPIEAQALLATYGQDRGEPGEPLWLGSVKSNMGHTQAAAGVAGVI 2413
Query: 814 NLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGT 873
+V +++++++PA+LH + + ++ + + + W + R VS+FG+SGT
Sbjct: 2414 KMVLAMRHELLPATLHVDVPSPHVDWSAGAVELLTAPRVW-PAGARTRRAGVSSFGISGT 2472
Query: 874 NAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCI 933
NAH+++ E + + + P V+SAK++ +L+ + ++ ++R ++ + +
Sbjct: 2473 NAHVII-EAVPV----VPRREAGWAGPVVPWVVSAKSESALRGQAARLAAYVRGDDGLDV 2527
Query: 934 ENFVYTLMQGRHHFQYR 950
+ ++L GR F++R
Sbjct: 2528 ADVGWSLA-GRSVFEHR 2543
|
|
| UNIPROTKB|Q10977 ppsA "Phthiocerol synthesis polyketide synthase type I PpsA" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 812 (290.9 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 173/432 (40%), Positives = 253/432 (58%)
Query: 460 NS-EELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENP--IKSS 515
NS +E IA++GM RFP + E W L + IS++P + W+ + P + ++
Sbjct: 98 NSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPPEVAAA 155
Query: 516 NKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ 575
++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P +
Sbjct: 156 LARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRS 215
Query: 576 KIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAINTACSS 629
G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++TACSS
Sbjct: 216 ATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSS 275
Query: 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLV 689
SLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD A+G V
Sbjct: 276 SLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFV 335
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 749
E VVLKRL+ A DGD + A+I GS +N DG++NG+ APN +Q ++++ Y +
Sbjct: 336 RGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVNQDGRSNGLMAPNPAAQMAVLRAAYTNA 395
Query: 750 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 809
+ P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT AA+G+
Sbjct: 396 GMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGI 455
Query: 810 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869
I V ++++ IP + H E N +I + + + +W R G VS+FG
Sbjct: 456 AGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG-VSSFG 514
Query: 870 MSGTNAHIVLQE 881
GTNAH+V+++
Sbjct: 515 FGGTNAHVVIEQ 526
|
|
| UNIPROTKB|Q7TXM0 ppsA "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA" [Mycobacterium bovis AF2122/97 (taxid:233413)] | Back alignment and assigned GO terms |
|---|
Score = 806 (288.8 bits), Expect = 5.0e-81, Sum P(2) = 5.0e-81
Identities = 172/432 (39%), Positives = 252/432 (58%)
Query: 460 NS-EELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENP--IKSS 515
NS +E IA++GM RFP + E W L + IS++P + W+ + P + ++
Sbjct: 98 NSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPPEVAAA 155
Query: 516 NKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ 575
++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P +
Sbjct: 156 LARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRS 215
Query: 576 KIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAINTACSS 629
G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++TACSS
Sbjct: 216 ATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSS 275
Query: 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLV 689
SLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD A+G V
Sbjct: 276 SLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFV 335
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 749
E VVLKRL+ A DGD + A+I GS + DG++NG+ APN +Q ++++ Y +
Sbjct: 336 RGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVTQDGRSNGLMAPNPAAQMAVLRAAYTNA 395
Query: 750 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 809
+ P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT AA+G+
Sbjct: 396 GMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGI 455
Query: 810 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869
I V ++++ IP + H E N +I + + + +W R G VS+FG
Sbjct: 456 AGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG-VSSFG 514
Query: 870 MSGTNAHIVLQE 881
GTNAH+V+++
Sbjct: 515 FGGTNAHVVIEQ 526
|
|
| UNIPROTKB|Q10978 ppsB "Phthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 3.2e-80, P = 3.2e-80
Identities = 165/427 (38%), Positives = 257/427 (60%)
Query: 463 ELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSK 521
E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y + ++ +K
Sbjct: 34 EPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDPLTPGRMTTK 93
Query: 522 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 581
W G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ + + + +
Sbjct: 94 WGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSLGGTRTAVMM 153
Query: 582 GVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
GV + YQ L D + T ++I R++Y + L+GP +A++TACSSSLVA
Sbjct: 154 GVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDTACSSSLVAV 212
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694
H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A+G V E
Sbjct: 213 HLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAADGFVRGEGA 272
Query: 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 754
VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I + ++ P+
Sbjct: 273 GVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADALRSGDVAPD 332
Query: 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 814
+NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH AA+G+ I
Sbjct: 333 SVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEAAAGIAGFIK 389
Query: 815 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 874
+++ IP +LH + N I ++ F++ N W T E R AVS+FG+ GTN
Sbjct: 390 ATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAVSSFGLGGTN 448
Query: 875 AHIVLQE 881
AH+++++
Sbjct: 449 AHVIIEQ 455
|
|
| UNIPROTKB|Q7TXL9 ppsB "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium bovis AF2122/97 (taxid:233413)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 3.2e-80, P = 3.2e-80
Identities = 165/427 (38%), Positives = 257/427 (60%)
Query: 463 ELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSK 521
E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y + ++ +K
Sbjct: 34 EPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDPLTPGRMTTK 93
Query: 522 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 581
W G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ + + + +
Sbjct: 94 WGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSLGGTRTAVMM 153
Query: 582 GVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
GV + YQ L D + T ++I R++Y + L+GP +A++TACSSSLVA
Sbjct: 154 GVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDTACSSSLVAV 212
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694
H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A+G V E
Sbjct: 213 HLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAADGFVRGEGA 272
Query: 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 754
VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I + ++ P+
Sbjct: 273 GVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADALRSGDVAPD 332
Query: 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 814
+NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH AA+G+ I
Sbjct: 333 SVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEAAAGIAGFIK 389
Query: 815 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 874
+++ IP +LH + N I ++ F++ N W T E R AVS+FG+ GTN
Sbjct: 390 ATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAVSSFGLGGTN 448
Query: 875 AHIVLQE 881
AH+++++
Sbjct: 449 AHVIIEQ 455
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1005 | |||
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 0.0 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 0.0 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 1e-148 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 2e-83 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 6e-62 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 3e-58 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 2e-57 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 5e-53 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 2e-47 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 9e-46 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 1e-42 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-37 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 1e-35 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 3e-34 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 9e-34 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 7e-33 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 2e-32 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 2e-30 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 1e-29 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 4e-29 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 1e-25 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-24 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 5e-24 | |
| cd08955 | 376 | cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase ( | 5e-21 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 2e-20 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 2e-20 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 3e-20 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 2e-19 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 6e-19 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 8e-19 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 3e-17 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 2e-15 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 8e-14 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 9e-14 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 1e-12 | |
| pfam00550 | 66 | pfam00550, PP-binding, Phosphopantetheine attachme | 5e-09 | |
| cd08956 | 448 | cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase ( | 7e-08 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 1e-07 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-06 | |
| smart00823 | 86 | smart00823, PKS_PP, Phosphopantetheine attachment | 4e-06 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-05 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-05 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 4e-05 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-04 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 1e-04 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 1e-04 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 2e-04 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 4e-04 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 0.001 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.001 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 0.002 | |
| COG0236 | 80 | COG0236, AcpP, Acyl carrier protein [Lipid metabol | 0.002 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 0.003 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 585 bits (1511), Expect = 0.0
Identities = 202/422 (47%), Positives = 271/422 (64%), Gaps = 10/422 (2%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
IAI+GM+ RFP A + +EFW+ L+ +D ISEIPE +D YY +P K K ++ G
Sbjct: 3 IAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKP-GKTYTRRGG 61
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ +D FD FF ISP EAE MDP+QR LL+ +W ALEDAGY P +A + G+FVG
Sbjct: 62 FLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGAS 121
Query: 585 EGSNYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIA 637
S+Y + L + T T A L+ R++YF DL+GP + ++TACSSSLVA H+A
Sbjct: 122 -SSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHLA 180
Query: 638 CQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 697
CQSLR ECD A+ GVNL++SP+ ++ + AGMLSPDG+C FD A+G V E V V
Sbjct: 181 CQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240
Query: 698 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 757
VLKRLS AL DGD I+A+IRGS +N DG+T GITAP+G +Q LI+ Y ++ ++P DI+
Sbjct: 241 VLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDID 300
Query: 758 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQ 817
Y+ HGTGT LGDP+E+ AL VF + I S KSNIGH AA+GL LI +V
Sbjct: 301 YVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVL 360
Query: 818 SIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHI 877
++++ +IP +LH E N I + SP + + W R G VS+FG GTNAH+
Sbjct: 361 ALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAG-VSSFGFGGTNAHV 419
Query: 878 VL 879
+L
Sbjct: 420 IL 421
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 579 bits (1494), Expect = 0.0
Identities = 211/526 (40%), Positives = 296/526 (56%), Gaps = 18/526 (3%)
Query: 460 NSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKIN 519
E IAIIGM+ RFP A + EFW +L +D I+E+P +D YY+ K
Sbjct: 1 QLIEPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSY 60
Query: 520 SKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGM 579
S+W G + +D+FD LFF ISP EAE MDP+QR LL+ +W ALEDAG P+ + G+
Sbjct: 61 SRWGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGV 120
Query: 580 FVGVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLV 632
F G Y L + +T +++ + R++Y + L GP + ++TACSSSLV
Sbjct: 121 FAGASVAD-YLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLV 179
Query: 633 ATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSE 692
A H+ACQSLR ECD A++ GVNL++SPE+ ++ GMLSPDG+C FD A+G V E
Sbjct: 180 AVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGE 239
Query: 693 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 752
VVLKRLS A DGD I+A+IRGS +N DG++NG+TAPN +Q ++I+ + ++
Sbjct: 240 GAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGID 299
Query: 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812
P + Y+ HGTGT LGDP+E NAL V+ Q CAI S KSNIGH AA+G+ L
Sbjct: 300 PATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQ-PCAIGSVKSNIGHLEAAAGIAGL 358
Query: 813 INLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 872
I ++K+ IP +LH + N I +SPF + W T R VS+FG G
Sbjct: 359 IKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRR-AGVSSFGFGG 417
Query: 873 TNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN-NTV 931
TNAH++L+E + ++VLSAKT L ++ L +
Sbjct: 418 TNAHVILEEA-------PPRAESTIPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLL 470
Query: 932 CIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILH 977
+ + YTL GR HF++R A++ + EE+ + K K L
Sbjct: 471 SLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALS 516
|
Length = 1061 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 442 bits (1139), Expect = e-148
Identities = 157/417 (37%), Positives = 207/417 (49%), Gaps = 119/417 (28%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
IAI+GMS RFP A + EFW +L+
Sbjct: 1 IAIVGMSCRFPGADDPEEFWDLLLA----------------------------------- 25
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ +D FD FF ISP EAE MDP+QR LL+ +W ALEDAG P + + G+FVGV
Sbjct: 26 GLDDVDLFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGV- 84
Query: 585 EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQH 644
+ D Y + ++TACSSSLVA H+ACQSLR
Sbjct: 85 ---SSSD--------------------Y-------SVTVDTACSSSLVALHLACQSLRSG 114
Query: 645 ECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704
ECD A++ GVNL++SP+ ++ ++ AGMLSPDG+C FD A+G V E V VVLKRLS
Sbjct: 115 ECDMALAGGVNLILSPDTFVGLSRAGMLSPDGRCKTFDASADGYVRGEGVGVVVLKRLSD 174
Query: 705 ALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764
AL DGDPI A+IRGS +N DG++NGITAP+G +Q
Sbjct: 175 ALRDGDPILAVIRGSAVNQDGRSNGITAPSGPAQ-------------------------- 208
Query: 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKII 824
I S KSNIGH AA+G+ LI +V ++K+ +I
Sbjct: 209 --------------------------LLIGSVKSNIGHLEAAAGVAGLIKVVLALKHGVI 242
Query: 825 PASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881
P +LH E N +I L+ SP + W + R VS+FG GTNAH++L+E
Sbjct: 243 PPTLHFETPNPHIDLEESPLRVPTELTPWPP-PGRPRRAGVSSFGFGGTNAHVILEE 298
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 2e-83
Identities = 99/257 (38%), Positives = 137/257 (53%), Gaps = 33/257 (12%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+AI GM RFP EFW++L+ +D I E P D Y + G
Sbjct: 4 VAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA---DLSGLYPPSRVA---------G 51
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGV 583
I G +FD FF ISP EAE MDP+QR L+ +W ALEDAG P + + + G+FVG
Sbjct: 52 EIYG-FDFDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRTGVFVG- 109
Query: 584 EEGSNYQDRLDQVNLTSTHN--------------AILSARLAYFMDLKGPVMAINTACSS 629
S D + L S ++ + R++Y + L+GP + ++TACSS
Sbjct: 110 ---SGSGDYAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSS 166
Query: 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG-MLSPDGKCYVFDERANGL 688
SLVA H A +S+R+ ECD A++ GV ++P + ++AG +LSPDG C FD A+G
Sbjct: 167 SLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGF 226
Query: 689 VPSEAVVAVVLKRLSRA 705
V E V AV+LK LS A
Sbjct: 227 VRGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 6e-62
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 24/337 (7%)
Query: 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVG-----VEEGSNYQDRLDQVN---LTSTH 602
+ + A+ DAG N +G+ VG D + V +T
Sbjct: 12 SILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAM 71
Query: 603 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA 662
S ++A + + GP ++ AC+ SL A +A +++ + D ++ G + +P
Sbjct: 72 FPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD 131
Query: 663 YIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 722
+ +P+ FD A+G V + A+V++ L AL+ G I+A I G+
Sbjct: 132 CEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAAT 191
Query: 723 YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK 782
DG G AP+ K + L DI+Y++ HGTGT +GD E+ L F
Sbjct: 192 IDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFG 251
Query: 783 NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842
+K+ A+++ K+ G+ +A+ ++++ V +++ IP S+H E+ + +
Sbjct: 252 DKSP-----AVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL---- 302
Query: 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
N T +LR ++ FG+ GTNA +VL
Sbjct: 303 -------NIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 205 bits (525), Expect = 3e-58
Identities = 107/425 (25%), Positives = 177/425 (41%), Gaps = 51/425 (12%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + EFW+ L+ + I I FD + S+ G +P D D
Sbjct: 13 PLGNGVEEFWEALLAGRSGIRPITR--FDASGFP-----------SRIAGEVPDFDPEDY 59
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGS------- 587
+ E RMD + L + AL DAG P ++ ++IG+ +G G
Sbjct: 60 ----LDRKELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEA 115
Query: 588 --NYQDRLDQVNLTSTHNAIL----SARLAYFMDLKGPVMAINTACSSSLVATHIACQSL 641
++ + L + ++A + L+GP ++TAC+S A A + +
Sbjct: 116 YRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLI 175
Query: 642 RQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLVPSEAVVA 696
R D I+ G +I+P + LS P+ FD+ +G V E
Sbjct: 176 RLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGV 235
Query: 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPE 754
+VL+ L A + G I+A I G G + D ITAP +G +++ + L+PE
Sbjct: 236 LVLESLEHAKARGAKIYAEILGYGASSDA--YHITAPDPDGEGAARAMRAALADAGLSPE 293
Query: 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 814
DI+YI HGT T L D E A+ VF ++S KS GH A+G V I
Sbjct: 294 DIDYINAHGTSTPLNDAAESKAIKRVFGEHAKK---VPVSSTKSMTGHLLGAAGAVEAIA 350
Query: 815 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 874
+ +++ ++P +++ E+ + L Y+ ++ +R ++FG G N
Sbjct: 351 TLLALRDGVLPPTINLEEPDPECDLD----YVPNEAREA-----PIRYALSNSFGFGGHN 401
Query: 875 AHIVL 879
A +V
Sbjct: 402 ASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 217 bits (553), Expect = 2e-57
Identities = 135/456 (29%), Positives = 213/456 (46%), Gaps = 40/456 (8%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
IAI+GM+ F +R +N+FW ++ D I+++P + YY++ ++K K G
Sbjct: 9 IAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGG 68
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+P +D F+P+ F + P E D Q L + L DAG P+ KIG+ +GV
Sbjct: 69 FLPEVD-FNPMEFGLPPNILELTDISQLLSLVVAKEVLNDAGL-PDGYDRDKIGITLGVG 126
Query: 585 EG----SNYQDRLDQVNLTSTHNA---------------------------------ILS 607
G S+ RL L A ++S
Sbjct: 127 GGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVIS 186
Query: 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT 667
R+A DL G ++ AC+ SL A +A L + + I+ GV SP Y++ +
Sbjct: 187 GRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFS 246
Query: 668 SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 727
+ + FD + G++ E + + LKRL A DGD I+A+I+G G + DGK
Sbjct: 247 KTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKF 306
Query: 728 NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 787
I AP Q + +K Y + P I HGTGT GD E L VF
Sbjct: 307 KSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQ 366
Query: 788 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847
++ A+ S KS IGHT + +G +I V ++ +K++P +++ ++ N + ++NSPFY+N
Sbjct: 367 KQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLN 426
Query: 848 KSNKKW-NTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
+ W + R +S+FG GTN H+VL+EY
Sbjct: 427 TETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 5e-53
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 53/439 (12%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ I G+ + E W L+ K I I FD + K G
Sbjct: 5 VVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITR--FDAS-----------GLGVKIAG 51
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
I +D+ I+ E MD + + + ALEDAG + ++G+ +G
Sbjct: 52 EIKDLDDQ------IAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSG 105
Query: 585 EGS--NYQDRLDQVNLTSTHNAI------------LSARLAYFMDLKGPVMAINTACSSS 630
G + + LD + L I + +A LKGP TAC++
Sbjct: 106 IGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATG 165
Query: 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERA 685
A A + +R + D I+ G I+P + LS P+ FD+
Sbjct: 166 AHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225
Query: 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIK 743
+G V E A+VL+ L AL+ G I+A I G G D ITAP +G ++
Sbjct: 226 DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDA--YHITAPAPDGEGAIRAMR 283
Query: 744 SVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHT 803
+ + L PEDI+YI HGT T D E A+ VF + ++S KS GHT
Sbjct: 284 AALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSL---PVSSTKSLTGHT 340
Query: 804 FAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIG 863
A+G V I + +++ IIP ++ N ++ + +R
Sbjct: 341 LGAAGAVEAIISLLALRDGIIPPTI------NLDNPDPEAADLDVVPNE--ARTGAVRAA 392
Query: 864 AVSAFGMSGTNAHIVLQEY 882
++FG GTNA +V + Y
Sbjct: 393 LSNSFGFGGTNASLVFKRY 411
|
Length = 412 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 2e-47
Identities = 73/248 (29%), Positives = 105/248 (42%), Gaps = 20/248 (8%)
Query: 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII------YKKLKKFNNK 118
+K GG YL+TGG G +G + L +Y L+L GRS L L+ +
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261
Query: 119 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 178
+YI DV+D + + + G IDGV+H AG+ + +F +VL+ K+
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAE-DFEAVLAPKV 320
Query: 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 238
G + L AL + LDF FSS SA G G DYA N F +A YL
Sbjct: 321 DGLLNLAQALAD-------EPLDFFVLFSSVSAFFGGAGQADYAAANAFLDAFAAYLRQ- 372
Query: 239 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298
+ ++++INWP W + + +GL+ EQ L D
Sbjct: 373 ---RGPQGRVLSINWPAWREGGMAADL--GARELLARAGLLPIEPEEGLQALEQALSSDL 427
Query: 299 IQYLVLSG 306
Q LV G
Sbjct: 428 PQVLVSPG 435
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 9e-46
Identities = 53/120 (44%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Query: 713 HAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771
+A+IRGS +N DG NG+TAPNG +Q I++ + L+PED++Y+ HGTGT LGDP
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
+E AL VF +Q + S KSNIGH AA+G+ LI V ++++ +IP +L+ +
Sbjct: 61 IEAEALKAVFGPGRDSQ-PLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 1e-42
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 30/337 (8%)
Query: 561 ALEDAGYGPNQ-IANQKIGMFVG------VEEGSNYQDRLDQVNLTSTHNAILSARLA-- 611
AL DAG + ++G+ VG + VN + +LS
Sbjct: 83 ALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAG 142
Query: 612 ----YFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPE---AYI 664
+ GP+ AC+++L A +A +++R + D + GV E +
Sbjct: 143 WVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVED-PLEEGLSGFA 201
Query: 665 AM--TSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 722
M S P+ FDE +G V +E +VL+R AL+ G PI+ + G+
Sbjct: 202 NMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTAST 261
Query: 723 YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK 782
DG + A G I++ K+ L+ +D++ I HGT T D E A+ +V
Sbjct: 262 TDGAGRSVPAG-GKGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320
Query: 783 NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842
+T+ K+ GH+ A+G + LI +QS+++ +IP + + + +
Sbjct: 321 ALGAPL---PVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVD---PDVEH 374
Query: 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
+ S +N K+R V+AFG G+NA +VL
Sbjct: 375 LSVVGLSRD----LNLKVRAALVNAFGFGGSNAALVL 407
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 71/332 (21%), Positives = 117/332 (35%), Gaps = 85/332 (25%)
Query: 550 RQRHLLQESWL-ALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA 608
L E+ A+ DAG I +G G E S +
Sbjct: 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSG-----------------AAG 48
Query: 609 RLAYFMDLK-GPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT 667
+LAY + + GP ++N AC++ L A +A Q ++ + D ++ G
Sbjct: 49 QLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE----------- 97
Query: 668 SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 727
V + A V++ AL G A I + +DG +
Sbjct: 98 --------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGAS 137
Query: 728 NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 787
+ A +G + + + L P DI+Y+ HGTGT +GD VE+ D
Sbjct: 138 -MVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPD-----G 191
Query: 788 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847
+ A+++ GH A+GL L L+ ++++ IP
Sbjct: 192 VRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIP---------------------- 229
Query: 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
+ R + FG+ GTNA +VL
Sbjct: 230 -------PTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 132 bits (336), Expect = 1e-35
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQV 124
GTYLITGG G LG + +L + + L+L RS ++ + +L+ + +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+D+ + + + +I GP+ GV+H AG+ + + F +VL+ K +G L
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGV-LASLTPERFAAVLAPKAAGAWNL 119
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKY 244
+ + LDF FSS + +LG G +YA N F A+Y +
Sbjct: 120 HELTADL-------PLDFFVLFSSIAGVLGSPGQANYAAANAFLDALAEYRRARG----- 167
Query: 245 TNKL--ITINWPLW 256
L ++I W W
Sbjct: 168 ---LPALSIAWGAW 178
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 3e-34
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-----IIYKKLKKFNNKAIYIQ 123
GTYL+TGG G LG+ + +L + + +L+L RS ++ +L+ + +
Sbjct: 1 GTYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVA 59
Query: 124 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 183
DVSD+ + + + I + P+ GV+H AG+ + ++F VL+ K++G
Sbjct: 60 CDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDAL-LANMTAEDFARVLAPKVTGAWN 118
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKK 243
L+ A + LDF FSS + +LG G +YA N F A Y + +
Sbjct: 119 LHEATRDR-------PLDFFVLFSSIAGVLGSPGQANYAAANAFLDALAHYRRAQGL--- 168
Query: 244 YTNKLITINWPLW 256
+INW W
Sbjct: 169 ---PATSINWGPW 178
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 9e-34
Identities = 92/340 (27%), Positives = 141/340 (41%), Gaps = 46/340 (13%)
Query: 561 ALEDAGYGP-------------------NQIANQKIGMFVGVEEGSNYQDRLDQVNLTST 601
AL+DAG P ++A Q +E + ++ LD T
Sbjct: 67 ALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLD----TLP 122
Query: 602 H-NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISP 660
H AI +AR +GPV+A AC++ L A + ++ +C I+ V I+P
Sbjct: 123 HQAAIAAARQI---GTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITP 179
Query: 661 EAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSG 720
G L+ G Y FD + GLV E +VL+ A G I+ I G G
Sbjct: 180 LTLAGFQQMGALAKTG-AYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFG 238
Query: 721 INYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV 780
+ D P+G S I+ +S L PEDI+YI HGT T+L D E N + +
Sbjct: 239 LTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQAL 298
Query: 781 FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840
F ++ A++S K GHT ASG + + + +++++ +P C + L+
Sbjct: 299 FPHRV------AVSSTKGATGHTLGASGALGVAFSLLALRHQQLPP---C------VGLQ 343
Query: 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880
F +N L+ +FG G NA I L
Sbjct: 344 EPEFDLNFVR---QAQQSPLQNVLCLSFGFGGQNAAIALG 380
|
Length = 381 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 131 bits (333), Expect = 7e-33
Identities = 111/434 (25%), Positives = 185/434 (42%), Gaps = 69/434 (15%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + EFW+ L+ K I I FD ++ + K G + FDP
Sbjct: 13 PLGNGVEEFWENLLAGKSGIGPI--TRFD-----------ASDLPVKIAGEVKD---FDP 56
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 589
+ I EA RMD ++ L + A+ED+G + +++G+ + G+E
Sbjct: 57 EDY-IDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQ 115
Query: 590 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
L + +N+ + +I KGP A+ TAC++ A
Sbjct: 116 HIVLLEKGPRRVSPFFIPMSIINMAAGQISI-------RYGAKGPNHAVVTACATGTHAI 168
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A + +++ + D I+ G I+P + LS P+ FD+ +G V
Sbjct: 169 GDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFV 228
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 747
E +VL+ L A + G I+A I G G++ D ITAP G +++ K
Sbjct: 229 MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDA--YHITAPAPEGEGAARAMRAALK 286
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
+ +NPED++YI HGT T LGD E A+ VF + Y A++S KS GH A+
Sbjct: 287 DAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYK---LAVSSTKSMTGHLLGAA 343
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV-- 865
G + I V +++ I+P +++ + + L P N++ + +I
Sbjct: 344 GAIEAIFTVLALRDGIVPPTINLDNPDPECDLDYVP---NEA--------REAKIDYALS 392
Query: 866 SAFGMSGTNAHIVL 879
++FG G NA +V
Sbjct: 393 NSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 2e-32
Identities = 103/442 (23%), Positives = 175/442 (39%), Gaps = 58/442 (13%)
Query: 475 PAARNINEFWKILINNKDVISEIPE-------KIFDWKLYYENPIKSSNKINSKWYGSIP 527
P W+ LI K I ++ E I + K +I ++ S
Sbjct: 4 PLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-- 61
Query: 528 GIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEG 586
EFDP F + E + + AL DA +Q +IG+ +G G
Sbjct: 62 ---EFDPSDFAPTKRE----SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIG 114
Query: 587 S----------NYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSS 629
S Y+ +V+ L + +++ + LKGP + TAC++
Sbjct: 115 SLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH----KLKGPSGSAVTACAT 170
Query: 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDE 683
A + ++ E D I G I+P ++ + L P FD+
Sbjct: 171 GAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDK 230
Query: 684 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTEL 741
G V E +VL+ L AL G I+A IRG G + D + ITAP +G
Sbjct: 231 DRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDA--HHITAPHPDGRGARRC 288
Query: 742 IKSVYKKS-NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNI 800
+++ K N+N D++Y+ H T T +GD +E+ A+ VF + + ++S K +
Sbjct: 289 MENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPK--LYVSSTKGGL 346
Query: 801 GHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKL 860
GH A+G V I + S+ +IIP +++ E ++ +N K + +
Sbjct: 347 GHLLGAAGAVESIVTILSLYEQIIPPTINLEN-------PDAECDLNLVQGKTAHPLQSI 399
Query: 861 RIGAVSAFGMSGTNAHIVLQEY 882
++FG G N ++ +Y
Sbjct: 400 DAVLSTSFGFGGVNTALLFTKY 421
|
Length = 421 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-30
Identities = 104/463 (22%), Positives = 184/463 (39%), Gaps = 89/463 (19%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
I + GM P + FW+ L+ + I + + + +K G
Sbjct: 6 IVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVG-------------DLATKIGG 52
Query: 525 SIPGIDE-----FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQK--- 576
+P + E FDP + + P + +MD + + AL AG+ P+ + +++
Sbjct: 53 QVPDLAEDAEAGFDPDRY-LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTA 111
Query: 577 ------IGMFVGVEEGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMD 615
+G F + E LD N+ + H +I R +
Sbjct: 112 TIIGSGVGGFPAIAEA---VRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI---RYGF--- 162
Query: 616 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-- 673
KGP+ A TAC++ + A A + +R E D A+ G I + +A LS
Sbjct: 163 -KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTR 221
Query: 674 ----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 729
P+ FD +G V E +V++ L AL+ G P A + G G + D
Sbjct: 222 FNDAPEQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYH-- 279
Query: 730 ITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 787
+TA +G + +++ + PE++ ++ H T T +GD E+ A+ VF +
Sbjct: 280 MTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG----H 335
Query: 788 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE------KENNYIILKN 841
A++S KS GH A+G V I + +++ +I P +L+ E + + + K
Sbjct: 336 VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKA 395
Query: 842 SPFYINKSNKKWNTVNEKLRIGAVS-AFGMSGTNAHIVLQEYI 883
P ++ A+S FG G NA I+ + +
Sbjct: 396 RPMDMDY---------------ALSNGFGFGGVNASILFRRWE 423
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-29
Identities = 114/438 (26%), Positives = 183/438 (41%), Gaps = 71/438 (16%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P ++ WK L+ K I I L K G + F+P
Sbjct: 14 PLGNDVESTWKNLLAGKSGIGPI-THFDTSDL------------AVKIAGEVKD---FNP 57
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVG--------VEEG 586
+ +S EA RMD ++ + + A+EDAG + +IG+ +G +EE
Sbjct: 58 DDY-MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQ 116
Query: 587 SNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 631
L + +N+ + H +I KGP +I TAC++
Sbjct: 117 ---HITLLEKGPRRVSPFFVPMAIINMAAGHVSIR-------YGAKGPNHSIVTACATGA 166
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 686
A A + + + D ++ G I+P +A LS P+ FD+ +
Sbjct: 167 HAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRD 226
Query: 687 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 744
G V E +VL+ L A + G I+A + G G+ D +TAP +G +K
Sbjct: 227 GFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MTAPAPDGEGAARAMKL 284
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
K + +NPEDI+YI HGT T GD E A+ VF Y A++S KS GH
Sbjct: 285 ALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYK---VAVSSTKSMTGHLL 341
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 864
A+G V I V +I+ ++IP +++ + + L P N++ ++ K+
Sbjct: 342 GAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP---NEARER------KIDYAL 392
Query: 865 VSAFGMSGTNAHIVLQEY 882
++FG GTNA +V + Y
Sbjct: 393 SNSFGFGGTNASLVFKRY 410
|
Length = 411 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 4e-29
Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 555 LQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTST---HNAILSARLA 611
+E+W DA GP +IG+ VG GSN Q R +Q + T A L
Sbjct: 88 AREAW---RDAALGPVDPD--RIGLVVG---GSNLQQR-EQALVHETYRDRPAFLRPSYG 138
Query: 612 -YFMD------------LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLM- 657
FMD ++G + A +S +A A + ++ D I+ G LM
Sbjct: 139 LSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVG-ALMD 197
Query: 658 ISPEAYIAMTSAG-MLS------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 710
+S A+ S G M S P+ C FD+ +G + EA AVVL+ A G
Sbjct: 198 LSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGA 257
Query: 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770
+A + G + D P+ + +I++ +++ L PEDI+Y+ HGTG+ LGD
Sbjct: 258 RPYAKLLGWSMRLDANRG--PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGD 315
Query: 771 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLI-NLVQ 817
E+ AL + I + KS GH +A+G+V LI L+Q
Sbjct: 316 ETELAALFASGLAHAW------INATKSLTGHGLSAAGIVELIATLLQ 357
|
Length = 410 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 1e-25
Identities = 101/373 (27%), Positives = 162/373 (43%), Gaps = 64/373 (17%)
Query: 524 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV 583
G PG PLF P+E E W A +A VG
Sbjct: 95 GDFPG-----PLFLAAPPVELE-------------WPARF-------ALAAA-----VGD 124
Query: 584 EEGSNYQDRLDQVNLTSTHNAI--------LSARLAYFMDLKGPVMAINTACSSSLVATH 635
+ +Y DRL + +A+ ++ RLA +G ++++TAC+S A
Sbjct: 125 NDAPSY-DRLLRAARGGRFDALHERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQ 183
Query: 636 IACQSLRQHECDTAISAGVNLMISPEAYI--AMTSAGMLS-----PDGKCYVFDERANGL 688
+ +++R+ E D A+ + +S EA I ++ SA LS P+ F + +G
Sbjct: 184 LGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSA--LSTQNDPPEKASKPFSKDRDGF 241
Query: 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK 748
V +E A+VL+ L A++ G I I+ G G D ++P+G I++
Sbjct: 242 VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD 301
Query: 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 808
+ L PE I+YI HGT T D +E L VF + + ++SNKS IGHT A+G
Sbjct: 302 AGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLAS---IPVSSNKSMIGHTLTAAG 358
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV--S 866
V + + +I+ +P +++ + + I L P N R+ AV +
Sbjct: 359 AVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP------NVA-----RDARVTAVLSN 407
Query: 867 AFGMSGTNAHIVL 879
+FG G NA +VL
Sbjct: 408 SFGFGGQNASLVL 420
|
Length = 425 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 1e-24
Identities = 106/458 (23%), Positives = 180/458 (39%), Gaps = 75/458 (16%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEI-----PEKIFDWKLYYENPIKSSNKIN 519
+ + G+ P + W+ LI + + + K D E + + +++
Sbjct: 8 VVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSED----EETQLYTLDQLP 63
Query: 520 SKWYGSIP---GIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGP-NQIANQ 575
S+ +P G +FD E L + + L + AL DA + P A +
Sbjct: 64 SRVAALVPRGTGPGDFD----EELWLNSRSSSRFIGYALCAADEALSDARWLPSEDEAKE 119
Query: 576 KIGMFVGVEEGS-------------NYQDRLDQ-------VNLTSTHNAILSARLAYFMD 615
+ G+ +G GS RL +N+ + H +S R
Sbjct: 120 RTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGH---VSIRYG---- 172
Query: 616 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-- 673
+GP A TAC++ + A + ++ + D ++ G I + + + LS
Sbjct: 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTK 232
Query: 674 ----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 729
P FD +G V E +VL+ L A G I+A +RG G++ D +
Sbjct: 233 FNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDA--HH 290
Query: 730 ITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 787
IT P +G + ++S L+P ++Y+ H T T LGD VE A+ VF +
Sbjct: 291 ITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATS 350
Query: 788 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK-----ENNYIILKNS 842
A +S K GH A+G V I V +I + I P +L+ E+ ++ ++ L S
Sbjct: 351 GGL-AFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTAS 409
Query: 843 PFYINKSNKKWNTVNEKLRIGAVS-AFGMSGTNAHIVL 879
L A+S +FG GTNA ++
Sbjct: 410 K--------------AMLIRAALSNSFGFGGTNASLLF 433
|
Length = 437 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 5e-24
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 596 VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVN 655
VNL + H +I KGP+ A TAC++ + A A + +R +E D A+ G
Sbjct: 67 VNLAAGHVSIKH-------HFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAE 119
Query: 656 LMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709
+I + +A LS P+ FD +G V E ++++ L AL+ G
Sbjct: 120 AVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARG 179
Query: 710 DPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769
A I G G + D A +G +K +++ + PE + ++ H T T +G
Sbjct: 180 AKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG 239
Query: 770 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 829
D EINA+ +F AITS KS GH A+G + I V +++ +I+PA+L+
Sbjct: 240 DLGEINAIKHLFGESNA----LAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLN 295
Query: 830 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883
E + P + N + + FG +G NA I+L+ ++
Sbjct: 296 LENPD--------PAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKRWV 341
|
Length = 342 |
| >gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x) | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 5e-21
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYI---QVD 125
TYLITGG G LG+L +++L+ + + +L+L+GR ++ + + + D
Sbjct: 150 ATYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEAGAEVVVLAAD 209
Query: 126 VSDKLKMISEINSIINNIGPIDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKISGTIA 183
VSD+ + + + I ++ P+ GV+H AG+ G+ +N F VL+ K+ G
Sbjct: 210 VSDRDALAAALAQIRASLPPLRGVIHAAGVLDDGVLANQDWE---RFRKVLAPKVQGAWN 266
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227
L+ ++ LDF FSS +++LG G +YA N F
Sbjct: 267 LHQLTQD-------LPLDFFVLFSSVASLLGSPGQANYAAANAF 303
|
Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 2e-20
Identities = 77/273 (28%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 560 LALEDAG-YGPNQIANQKIGMFVGVEEGS--------NYQDRLDQVNLTST-------HN 603
LALEDAG G + + ++G+ G GS +T+T H
Sbjct: 83 LALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHT 142
Query: 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAY 663
+ + F LKG V+ ++AC+S A ++++ ++ G + EA
Sbjct: 143 T--AVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAA 200
Query: 664 I--------AMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 715
+ A L+P FD +GLV E +VL+ L A + G I+A
Sbjct: 201 VFDTLFATSTRNDAPELTPRP----FDANRDGLVIGEGAGTLVLEELEHAKARGATIYAE 256
Query: 716 IRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775
I G G N DG +T P + ++ K + L PEDI Y+ HGT T GD E
Sbjct: 257 IVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQ 314
Query: 776 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 808
A VF + I+S KS GHT A G
Sbjct: 315 ATAAVFGARM------PISSLKSYFGHTLGACG 341
|
Length = 405 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 2e-20
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS----KLNSIIYKKLKKFNNKAIYIQV 124
GT LITGGTG LG+ + +L + + +L+L R ++ +L+ +
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELV-AELEALGAEVTVAAC 59
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+D+ + + + ++ +GP+DGV+H AG+ + E + F VL+ K++G L
Sbjct: 60 DVADRDALAALLAALPAALGPLDGVVHNAGVLDDG-PLEELTPERFERVLAPKVTGAWNL 118
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227
+ + L FSS + +LG G +YA N
Sbjct: 119 HEL-------TRDLDLGAFVLFSSVAGVLGSPGQANYAAANAA 154
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 3e-20
Identities = 76/281 (27%), Positives = 112/281 (39%), Gaps = 38/281 (13%)
Query: 617 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS--PEAYIAMTSAGMLS- 673
K V+ +AC+S A A + + E D AI GV I P A A M +
Sbjct: 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN 220
Query: 674 ---PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGI 730
P G C FD+ +G V E +V++ A + G I A I G+ I DG
Sbjct: 221 NDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVA 280
Query: 731 TAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790
PNG + + + L P DI+++ H TGT +GD E A+ N
Sbjct: 281 PDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAI-----NNALGGHR 335
Query: 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI---ILKNSP---- 843
A+ + KS +GH+ A G V I V +++ +IP +L+ E + I ++ P
Sbjct: 336 PAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGN 395
Query: 844 --FYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
+ IN S FG G N + Y
Sbjct: 396 YRYAINNS------------------FGFGGHNVALAFGRY 418
|
Length = 418 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 2e-19
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYI---Q 123
GTYLITGG G LG+L + +L + + +L+L R + + +
Sbjct: 149 LDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVR 208
Query: 124 VDVSDK--LK-MISEINSIINNIGPIDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKI 178
DV+D L +++E+ GP+ GV+H AG+ L + + A F +VL++K+
Sbjct: 209 CDVTDPAALAALLAELA----AGGPLAGVIHAAGVLRDALLAELTPAA---FAAVLAAKV 261
Query: 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 232
+G + L E T LDF FSS +A+LG G YA N F A
Sbjct: 262 AGALNL---HELT----PDLPLDFFVLFSSVAALLGGAGQAAYAAANAFLDALA 308
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 6e-19
Identities = 93/442 (21%), Positives = 179/442 (40%), Gaps = 51/442 (11%)
Query: 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 520
S+ + + GM P + WK L+ + I I FD + ++
Sbjct: 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEH--FD-----------TTNFST 48
Query: 521 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF 580
++ G + F+ + +S +A +MD ++ + AL+D+G + +IG+
Sbjct: 49 RFAGLVKD---FNCEEY-MSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVA 104
Query: 581 VG----------------VEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAIN 624
+G VE+G ++ + ST +++ L+ L+GP +AI+
Sbjct: 105 IGSGIGGLGLIEAGHQALVEKGPR---KVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAIS 161
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCY 679
TAC++ L A + + + D ++ G +P +A LS P
Sbjct: 162 TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASR 221
Query: 680 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQT 739
+D+ +G V + +VL+ A + G I+A + G G++ D + +G
Sbjct: 222 PWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGA 281
Query: 740 ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSN 799
+++ + + + E I Y+ HGT T GD EI + Q ++S KS
Sbjct: 282 LAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVL--VSSTKSM 339
Query: 800 IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 859
GH A+G V I V S+ +I+P +++ + + + P K E
Sbjct: 340 TGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKV--------ES 391
Query: 860 LRIGAVSAFGMSGTNAHIVLQE 881
+ ++FG GTN ++ ++
Sbjct: 392 MEYAICNSFGFGGTNGSLIFKK 413
|
Length = 414 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 8e-19
Identities = 113/459 (24%), Positives = 178/459 (38%), Gaps = 68/459 (14%)
Query: 454 NKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIK 513
K ++ + GM P + + F+ L+ ISEI FD + P +
Sbjct: 121 KKKPLTKQRRVV-VTGMGVVSPLGHDPDVFYNNLLEGVSGISEIER--FDCSQF---PTR 174
Query: 514 SSNKINS----KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGP 569
+ +I S W ++P ++RMD +LL AL D G
Sbjct: 175 IAGEIKSFSTDGW----------------VAPKLSKRMDKFMLYLLTAGKKALADGGITE 218
Query: 570 ---NQIANQKIGMFVGVEEGSN--YQDRLDQVNLT-----------STHNAILSARLAYF 613
++ K G+ +G G + D ++ + ++ +T N + SA LA
Sbjct: 219 DVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTN-MGSAMLA-- 275
Query: 614 MDL--KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGM 671
MDL GP +I+TAC++S A + + E D + G + I P +
Sbjct: 276 MDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRA 335
Query: 672 LS-----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK 726
LS P +D +G V E ++L+ L A G I+A G D
Sbjct: 336 LSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAY 395
Query: 727 TNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTY 786
P G I+ +S ++ ED+NYI H T TK GD E AL F
Sbjct: 396 HMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ--- 452
Query: 787 NQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYI 846
N + + S KS IGH A+G V I VQ+I+ + +++ E + + K +
Sbjct: 453 NPEL-RVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK----VL 507
Query: 847 NKSNKKWNTVNEKLRIGAV--SAFGMSGTNAHIVLQEYI 883
K E+L I ++FG G N+ I+ Y
Sbjct: 508 VGPKK------ERLDIKVALSNSFGFGGHNSSILFAPYK 540
|
Length = 540 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 85.1 bits (211), Expect = 3e-17
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 47/346 (13%)
Query: 561 ALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAIL 606
A+ DAG Q++N + G+ G GS R+ +T + +
Sbjct: 82 AIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTV 141
Query: 607 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGV-----NLMISPE 661
SA LA +KG +I++AC++S A + ++ + D + G + +
Sbjct: 142 SACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFD 201
Query: 662 AYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGI 721
A A+++ +P+ +D +G V + VV++ L AL+ G I+A I G G
Sbjct: 202 AMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGA 261
Query: 722 NYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 781
DG + AP+G ++ + I+YI THGT T +GD E+ A+ +VF
Sbjct: 262 TSDGYD--MVAPSGEGAVRCMQMALATVD---TPIDYINTHGTSTPVGDVKELGAIREVF 316
Query: 782 KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK-----ENNY 836
+K+ AI++ KS GH+ A+G+ I + +++ I S + E+
Sbjct: 317 GDKS-----PAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMP 371
Query: 837 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
I+ + N + TV ++FG GTNA +V + Y
Sbjct: 372 IVTE------TTDNAELTTV-------MSNSFGFGGTNATLVFRRY 404
|
Length = 406 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 37/373 (9%)
Query: 529 IDEFDPLFFEISPLEAERMDPRQRHL-LQESWLALEDAGYGPNQIANQK--------IGM 579
I +FDP + P E ++ D R L L+ + A++DAG+ P ++ ++ IG
Sbjct: 52 ITDFDPTEV-MDPKEVKKAD-RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGG 109
Query: 580 FVGVEEGSNY-----QDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
+E+ S ++ + S +L ++ LKGP ++ TAC++ A
Sbjct: 110 LPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAI 169
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A +++ D + G I P + LS P FD+ +G V
Sbjct: 170 IEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFV 229
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 749
E A+VL+ A G I+A I G G G N IT+P +K+ + +
Sbjct: 230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFG--ESGDANHITSPAPEGPLRAMKAALEMA 287
Query: 750 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 809
NP+ I+YI HGT T D E AL ++F +K +K ++S K IGH A+G
Sbjct: 288 G-NPK-IDYINAHGTSTPYNDKNETAALKELFGSK---EKVPPVSSTKGQIGHCLGAAGA 342
Query: 810 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869
+ + + +++ I+P +++ E + L P N + K +L + ++FG
Sbjct: 343 IEAVISIMAMRDGILPPTINQETPDPECDLDYIP---NVARKA------ELNVVMSNSFG 393
Query: 870 MSGTNAHIVLQEY 882
GTN ++ ++
Sbjct: 394 FGGTNGVVIFKKV 406
|
Length = 406 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 8e-14
Identities = 85/370 (22%), Positives = 147/370 (39%), Gaps = 53/370 (14%)
Query: 482 EFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541
E+WK +++ + + I FD Y P + + G +P D + L + P
Sbjct: 20 EYWKAVLDGRSGLGPITR--FDPSGY---PARLA--------GEVPDFDAAEHLPGRLLP 66
Query: 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNYQDRLDQV 596
+ D R L + AL DAG P + +G+ G E G Q L
Sbjct: 67 ----QTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFG---QRELQ-- 117
Query: 597 NLTSTHNAILSA--RLAYFM-----------DLKGPVMAINTACSSSLVATHIACQSLRQ 643
L S +SA A+F ++GP + + L A A + +R+
Sbjct: 118 KLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRR 177
Query: 644 HECDTAISAGVNLMISPEAYIAMTSAGMLSPDG---KCYV-FDERANGLVPSEAVVAVVL 699
+S GV+ + P ++A S+G LS + Y+ FD A G VP E +VL
Sbjct: 178 GTP-LVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVL 236
Query: 700 KRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 759
+ + A G ++ I G +D G P G+++ I+ + L PED++ +
Sbjct: 237 EDAAAARERGARVYGEIAGYAATFDPPP-GSGRPPGLAR--AIRLALADAGLTPEDVDVV 293
Query: 760 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSI 819
G D E AL VF + +T+ K+ G +A + + + ++
Sbjct: 294 FADAAGVPELDRAEAAALAAVFGPRG-----VPVTAPKTMTGRLYAGGAPLDVATALLAL 348
Query: 820 KYKIIPASLH 829
+ +IP +++
Sbjct: 349 RDGVIPPTVN 358
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 9e-14
Identities = 66/226 (29%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 611 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT--- 667
AY L GP I+TACSSS A + L CD AI GV+ + +T
Sbjct: 145 AYL-GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC------RLTLNG 197
Query: 668 --SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 725
S LSP C F +G+ EA A L L R D + + G G + D
Sbjct: 198 FNSLESLSP-QPCRPFSANRDGINIGEAA-AFFL--LERE--DDAAV--ALLGVGESSDA 249
Query: 726 KTNGITAPN--GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 783
+ ++AP+ G+ ++ + L P DI YI HGT T L D +E A+ VF +
Sbjct: 250 --HHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD 307
Query: 784 KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 829
+S K GHT A+G V ++++ + P +
Sbjct: 308 GV------PCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWN 347
|
Length = 392 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 1e-12
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 62 NSYIKQGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN---SIIYKKLKKFNN 117
N I G +YLITGG+G LG+ +L+ + + N+I+ RS + ++ ++ K N
Sbjct: 212 NYPINLGKSYLITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWELELLIREWKSQNI 271
Query: 118 KAIYIQVDVSDKLKMISEINSIIN--NIGPIDGVLHIAGISGLTSNILEANYKN-FYSVL 174
K ++ VDVSD + IN I+N IGPI G+ H+A + L +LE + ++ F SV
Sbjct: 272 KFHFVSVDVSDVSSLEKAINLILNAPKIGPIGGIFHLAFV--LIDKVLEIDTESLFISVN 329
Query: 175 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY 234
+K+ G I L+ +I + K LD+ FSS S+I G G C+Y N ++Y
Sbjct: 330 KAKVMGAINLH---NQSIKRCWK--LDYFVLFSSVSSIRGSAGQCNYVCANSVLDSLSRY 384
Query: 235 L 235
Sbjct: 385 R 385
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
| >gnl|CDD|215989 pfam00550, PP-binding, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 5e-09
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 341 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 400
++ + +L EI + +L D G DS+ E L + + ++I PS F + TL
Sbjct: 3 LREIVAEVLGIP-DEIDPDDDLFDLGLDSLLAVELLARLEEEFGVEIPPSDLFEHPTLGE 61
Query: 401 LITYF 405
L Y
Sbjct: 62 LAAYL 66
|
A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Vibrio anguillarum angR has the attachment serine replaced by an alanine. Length = 66 |
| >gnl|CDD|187659 cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 3, complex (x) | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 7e-08
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 66/190 (34%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRS---------------KLNSIIYKKL 112
GT LITGGTG LG L + +L+ ++ +L+L R L
Sbjct: 194 GTVLITGGTGTLGALLARHLVTEHGVRHLLLVSRRGPDAPGAAELVAELAALG------- 246
Query: 113 KKFNNKAIYIQV-----DVSDKLKMISEINSIINNI---GPIDGVLHIAG------ISGL 158
A +V DV+D+ + + +++ + P+ V+H AG ++ L
Sbjct: 247 ------A---EVTVAACDVADR----AALAALLAAVPADHPLTAVVHAAGVLDDGVLTSL 293
Query: 159 TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFG 217
T L+A VL K+ L+ E T + L FV FSS++ +LG G
Sbjct: 294 TPERLDA-------VLRPKVDAAWHLH---ELT----RDLDLAAFV-LFSSAAGVLGSPG 338
Query: 218 SCDYAMGNRF 227
+YA N F
Sbjct: 339 QANYAAANAF 348
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta- ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the second KR domains of SpiE,-G, I, and -J, both KR domains of SpiD, and the third KR domain of SpiH. The single KR domain of SpiF, the first and second KR domains of SpiH, the first KR domains of SpiE,-G,- I, and -J, and the third KR domain of SpiG, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 448 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 1e-07
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 119 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 178
A Y DV++ + + + + +N I G++H AG+ +I + + F +V +K+
Sbjct: 2096 AEYASADVTNSVSVAATV-QPLNKTLQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153
Query: 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 238
G L + + L + + FSS++ G+ G DYAM N A L
Sbjct: 2154 DG-------LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKAL 2206
Query: 239 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLF-EQLLIQD 297
N + K+++ NW W+ N F V+ + G +LF QLL
Sbjct: 2207 NP----SAKVMSFNWGPWDGGMV----NPALKKMFNDRGVYVIPLDAGAELFVSQLLSDT 2258
Query: 298 KIQYLV 303
Q LV
Sbjct: 2259 GAQLLV 2264
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 10/161 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQ 123
G L+TG + +G + L + + ++ + RS ++ + +A +
Sbjct: 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63
Query: 124 VDVSDKLKMISE-INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI 182
DVSD + + + + G ID +++ AGI+G + + E +++ V+ + G
Sbjct: 64 ADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF 123
Query: 183 ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223
L A L K + SS + + G G YA
Sbjct: 124 LLTRAA------LPLMKKQRIVNISSVAGLGGPPGQAAYAA 158
|
Length = 251 |
| >gnl|CDD|214834 smart00823, PKS_PP, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-06
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 362 LADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 404
D G DS+ E L L + ++ F + T L +
Sbjct: 39 FRDLGLDSLMAVELRNRLEAATGLRLPATLVFDHPTPAALAEH 81
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. Length = 86 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 2e-05
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQ 123
+G T LITG + +G + L + NLIL R KL ++ + K + I
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIP 62
Query: 124 VDVSDKLKMISEI-NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI 182
D+SD + + + + + GPID +++ AG G LE + + I
Sbjct: 63 ADLSD-PEALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELSLD--------EEEEMI 112
Query: 183 ALN 185
LN
Sbjct: 113 QLN 115
|
Length = 265 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 23/121 (19%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 72 LITGGTGRLGM----LFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS 127
L+TG + +G + + ++L+ R++ ++ A+ +Q DVS
Sbjct: 2 LVTGASSGIGRAIARRLA-----REGAKVVLADRNEEALAELAAIEALGGNAVAVQADVS 56
Query: 128 DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYA 187
D+ + + + + G +D +++ AGI+ + E +++ VL ++G L A
Sbjct: 57 DEEDVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTRA 115
Query: 188 L 188
Sbjct: 116 A 116
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDK 129
LITG + +G + N+ L+ R L+ + +L N +DV+D+
Sbjct: 2 LITGASSGIGRALAREFAKA-GYNVALAARRTDRLDELK-AELLNPNPSVEVEILDVTDE 59
Query: 130 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA-LNYAL 188
+ I + +G +D V+ AG+ G +++ + ++K F + + + G A L AL
Sbjct: 60 ERNQLVIAELEAELGGLDLVIINAGV-GKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118
Query: 189 ENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKL 248
+ + + SS +A+ G G+ Y+ + A+ L KK ++
Sbjct: 119 P----QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYD--VKKRGIRV 172
Query: 249 ITIN 252
IN
Sbjct: 173 TVIN 176
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN---KAIYI 122
G LITGG+ +G + L+ + N+I+ RS KL + + + N K YI
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKE-GANVIIVARSESKLEEAVEEIEAEANASGQKVSYI 59
Query: 123 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS------GLTSNILEANYKNFYSVLSS 176
D+SD ++ + GP D V++ AGIS LT+ E Y
Sbjct: 60 SADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNY----- 114
Query: 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222
G++ + +++ + + + SS +A++G +G Y
Sbjct: 115 --FGSL---NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYC 155
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
+G L+TG + +G + L + +I S + + ++K +A DV
Sbjct: 4 KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDV 63
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
SD+ + + + +I + G ID +++ AGI E + V+ ++G ++
Sbjct: 64 SDEEAIKAAVEAIEEDFGKIDILVNNAGI-IRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122
Query: 187 A 187
A
Sbjct: 123 A 123
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
+ LITG G +G F L++ LIL+ + L + + + N+ I +++
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLS-AGARLILADINAPALEQLKEELTNLYKNRVIALEL 59
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGIS--GLTSNILEANYKNFYSVLSSKISGTI 182
D++ K + I S + G ID +++ A S S E Y+ + VL+ + G
Sbjct: 60 DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-04
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 18/98 (18%)
Query: 561 ALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-P 619
AL+DAG P I + VG G +Q A +A ++ L G P
Sbjct: 27 ALDDAGLEPADI----DAVVVGNAAGGRFQS-------------FPGALIAEYLGLLGKP 69
Query: 620 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLM 657
+ A +S A A ++ D + G M
Sbjct: 70 ATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKM 107
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 619 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKC 678
P + IN C S L A +A Q++R + D ++ GV M A + ++ + + G
Sbjct: 78 PAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESM--SNAPYVLPASRVGARMGDA 135
Query: 679 YVFDERA 685
+ D
Sbjct: 136 KLVDTML 142
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G T LITGGT +G+ + + +T +I++GR + + KK I +DV
Sbjct: 4 TGNTVLITGGTSGIGLALARKFLEAGNT-VIITGRREER---LAEAKKELPNIHTIVLDV 59
Query: 127 SDK----------LKMISEINSIINNIG 144
D L ++ +INN G
Sbjct: 60 GDAESVEALAEALLSEYPNLDILINNAG 87
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGV----NLMIS 659
A L+A L + P + +N AC+S L A +A Q++ E D ++ GV + +
Sbjct: 73 AALAAGLPGSV----PAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG 128
Query: 660 PEAYIAMTSAG 670
E + SA
Sbjct: 129 REGVRVLDSAV 139
|
Length = 392 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDV 126
G ++TGG+ +G+ + L + I+ + ++L KK+ K + DV
Sbjct: 8 GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDV 67
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGT 181
S + + I + G ID ++ AGI+ L+ Y+ + V+ ++G
Sbjct: 68 SSQESVEKTFKQIQKDFGKIDILIANAGITVHKP-ALDYTYEQWNKVIDVNLNGV 121
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|223314 COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSY 395
IE +K+ I L + EI + D G DS+ L E L + + ++I +
Sbjct: 6 IEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENI 65
Query: 396 STLERLITYFIKNHN 410
T+ L+ Y +
Sbjct: 66 KTVGDLVDYIEELLA 80
|
Length = 80 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 40.1 bits (95), Expect = 0.003
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
QG T L+TG + +G + L +++ + ++ +L+ +A +
Sbjct: 4 QGKTALVTGASRGIGRAIALRLA-ADGAKVVIYDSNEEAAEALA-AELRAAGGEARVLVF 61
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 157
DVSD+ + + I + + G +D +++ AGI+
Sbjct: 62 DVSDEAAVRALIEAAVEAFGALDILVNNAGITR 94
|
Length = 246 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK 131
L+TGGTG +G L+ + ++L R + S+ +++ + D++D
Sbjct: 2 LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRF-------HEGDLTDP-- 52
Query: 132 MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI-ALNYALEN 190
+ ++ + P D V+H+A SG+ ++ + + + + GT+ L A
Sbjct: 53 --DALERLLAEVQP-DAVIHLAAQSGVGASFEDPAD-----FIRANVLGTLRLLEAARRA 104
Query: 191 TILKLQKNKLDFVCYFSSSSAILGDFGS 218
+ + F+SSS + GD
Sbjct: 105 GVKRF---------VFASSSEVYGDVAD 123
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1005 | |||
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| KOG1202|consensus | 2376 | 100.0 | ||
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| KOG1394|consensus | 440 | 100.0 | ||
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.97 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.96 | |
| KOG1202|consensus | 2376 | 99.96 | ||
| KOG1201|consensus | 300 | 99.95 | ||
| KOG1200|consensus | 256 | 99.95 | ||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.95 | |
| KOG1205|consensus | 282 | 99.95 | ||
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.94 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.92 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.92 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.91 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.9 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.9 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.9 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.9 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.9 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.89 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.89 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| KOG0725|consensus | 270 | 99.89 | ||
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.89 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.89 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.89 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.89 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.89 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.88 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.88 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.88 | |
| KOG4169|consensus | 261 | 99.88 | ||
| PRK12743 | 256 | oxidoreductase; Provisional | 99.88 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.88 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.88 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.88 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.88 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.88 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.88 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.88 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.88 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.88 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.88 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.88 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.88 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.87 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.87 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.87 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.87 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.87 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.87 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.87 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.87 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.87 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.87 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.87 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.87 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.87 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.86 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.86 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.86 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.86 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.86 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.86 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.86 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.86 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.86 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.86 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.86 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.86 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.86 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.85 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.85 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.85 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.85 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.85 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.85 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.85 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.85 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.85 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.85 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.85 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.85 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.85 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.84 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.84 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.84 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.84 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.84 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.84 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.84 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.84 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.84 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.83 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.83 | |
| KOG1210|consensus | 331 | 99.83 | ||
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| KOG1207|consensus | 245 | 99.83 | ||
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| KOG1610|consensus | 322 | 99.83 | ||
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.83 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.82 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.82 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.82 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.82 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.82 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.82 | |
| KOG1199|consensus | 260 | 99.82 | ||
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.81 | |
| KOG1208|consensus | 314 | 99.81 | ||
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.81 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.8 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.8 | |
| KOG1611|consensus | 249 | 99.8 | ||
| PRK12742 | 237 | oxidoreductase; Provisional | 99.8 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.8 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.8 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.79 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.79 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.79 | |
| KOG1209|consensus | 289 | 99.78 | ||
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.77 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.77 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.77 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.77 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.77 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.76 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.75 | |
| KOG1014|consensus | 312 | 99.75 | ||
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.75 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.73 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.73 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.72 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.71 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.71 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.71 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.7 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.7 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.7 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.69 | |
| PRK06158 | 384 | thiolase; Provisional | 99.69 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.69 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.69 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.68 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.67 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.66 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.66 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.65 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| KOG1204|consensus | 253 | 99.65 | ||
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.63 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.62 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.6 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.6 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.59 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.58 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.57 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.56 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.56 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.55 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.52 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.48 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.48 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.45 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.44 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.44 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.43 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.43 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.43 | |
| KOG1478|consensus | 341 | 99.42 | ||
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.4 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.39 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.39 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.38 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.38 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.36 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.3 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.3 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.3 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.3 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.29 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.28 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.24 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.24 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.24 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 99.22 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.22 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.22 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.21 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.21 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.18 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.18 | |
| KOG1502|consensus | 327 | 99.18 | ||
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.17 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.16 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.16 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.15 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.12 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.1 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.08 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.06 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.06 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.04 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.04 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.03 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.01 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 98.99 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 98.97 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 98.97 | |
| KOG1406|consensus | 408 | 98.94 | ||
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 98.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 98.91 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 98.9 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.89 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 98.89 | |
| PRK00982 | 78 | acpP acyl carrier protein; Provisional | 98.87 | |
| KOG1390|consensus | 396 | 98.85 | ||
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.84 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.83 | |
| KOG1371|consensus | 343 | 98.82 | ||
| PLN02427 | 386 | UDP-apiose/xylose synthase | 98.82 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 98.77 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 98.77 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 98.73 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 98.72 | |
| CHL00124 | 82 | acpP acyl carrier protein; Validated | 98.72 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.71 | |
| PRK05883 | 91 | acyl carrier protein; Validated | 98.7 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.69 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.68 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.66 | |
| PRK12449 | 80 | acyl carrier protein; Provisional | 98.66 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.65 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.64 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 98.62 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 98.62 | |
| PRK05350 | 82 | acyl carrier protein; Provisional | 98.62 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 98.6 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 98.6 | |
| PRK09184 | 89 | acyl carrier protein; Provisional | 98.59 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.58 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.58 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.57 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.57 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 98.57 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.55 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.55 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.55 | |
| TIGR00517 | 77 | acyl_carrier acyl carrier protein. S (Ser) at posi | 98.54 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.53 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 98.53 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 98.53 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.49 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 98.48 | |
| KOG1389|consensus | 435 | 98.47 | ||
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 98.47 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.46 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK07081 | 83 | acyl carrier protein; Provisional | 98.42 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.41 | |
| PRK07117 | 79 | acyl carrier protein; Validated | 98.39 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.39 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK05828 | 84 | acyl carrier protein; Validated | 98.31 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.3 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.29 | |
| PRK08172 | 82 | putative acyl carrier protein IacP; Validated | 98.29 | |
| KOG1430|consensus | 361 | 98.29 | ||
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 98.28 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.27 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.26 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.25 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.2 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.19 | |
| COG0236 | 80 | AcpP Acyl carrier protein [Lipid metabolism / Seco | 98.19 | |
| PRK07639 | 86 | acyl carrier protein; Provisional | 98.15 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 98.14 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 98.13 | |
| TIGR02816 | 538 | pfaB_fam PfaB family protein. The protein PfaB is | 98.12 | |
| COG3433 | 74 | Aryl carrier domain [Secondary metabolites biosynt | 98.06 | |
| KOG1391|consensus | 396 | 98.01 | ||
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.01 | |
| PTZ00171 | 148 | acyl carrier protein; Provisional | 98.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 97.99 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 97.98 | |
| PRK05087 | 78 | D-alanine--poly(phosphoribitol) ligase subunit 2; | 97.88 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 97.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 97.86 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.83 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 97.81 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 97.79 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 97.79 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.78 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 97.76 | |
| PRK06508 | 93 | acyl carrier protein; Provisional | 97.75 | |
| KOG1392|consensus | 465 | 97.72 | ||
| PRK12320 | 699 | hypothetical protein; Provisional | 97.71 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 97.71 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.7 | |
| PRK05691 | 4334 | peptide synthase; Validated | 97.59 | |
| KOG1221|consensus | 467 | 97.56 | ||
| PRK12467 | 3956 | peptide synthase; Provisional | 97.54 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 97.54 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 97.53 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 97.48 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 97.44 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 97.42 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.41 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.41 | |
| KOG4022|consensus | 236 | 97.41 | ||
| PRK12467 | 3956 | peptide synthase; Provisional | 97.4 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 97.38 | |
| PRK05691 | 4334 | peptide synthase; Validated | 97.37 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 97.35 | |
| TIGR01688 | 73 | dltC D-alanine--poly(phosphoribitol) ligase, subun | 97.28 | |
| KOG1748|consensus | 131 | 97.26 | ||
| PRK12316 | 5163 | peptide synthase; Provisional | 97.19 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.73 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 96.52 | |
| KOG0747|consensus | 331 | 96.47 | ||
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 96.41 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 96.4 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 96.32 | |
| KOG1429|consensus | 350 | 96.31 | ||
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.22 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 96.21 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 96.21 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 95.9 | |
| KOG1431|consensus | 315 | 95.86 | ||
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.73 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.69 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 95.62 | |
| KOG2865|consensus | 391 | 95.59 | ||
| KOG1203|consensus | 411 | 95.55 | ||
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.53 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.51 | |
| KOG1372|consensus | 376 | 95.45 | ||
| PLN00106 | 323 | malate dehydrogenase | 95.36 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 94.88 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 94.71 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 94.65 | |
| KOG2774|consensus | 366 | 94.41 | ||
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.37 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 93.89 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 93.56 | |
| KOG1198|consensus | 347 | 93.35 | ||
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 92.85 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 92.79 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 92.53 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 92.47 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 92.02 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 92.0 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 91.96 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 91.84 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 91.79 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 91.55 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 90.66 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 90.48 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 90.37 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 90.12 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 89.82 |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-123 Score=1168.94 Aligned_cols=531 Identities=40% Similarity=0.637 Sum_probs=498.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||+|||||++++++||++|.+|+++|+++|++|||++.+|++++..+++.+++||||+++++.||+.||||||+
T Consensus 4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr 83 (1061)
T COG3321 4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR 83 (1061)
T ss_pred CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccccc------ccccccccchhHHHHHHHHHhCC
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRL------DQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~------~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
||+.||||||++||++|+|||||||.+..+.+++||||+|++..+|..... ..+..+++..+++++||||+|||
T Consensus 84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l 163 (1061)
T COG3321 84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL 163 (1061)
T ss_pred HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999888765542 34667888889999999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEE
Q psy612 617 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696 (1005)
Q Consensus 617 ~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~ 696 (1005)
+||+++|||+|||||+|+|+||++|++||||+||+||||+.++|..++.+++.|+||++|+|++||+++|||++|||+|+
T Consensus 164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~ 243 (1061)
T COG3321 164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV 243 (1061)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 776 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~a 776 (1005)
|+||||++|++|||+|||||+|+++|+||++.++|+||+.+|..++++||++|||+|++|+|||+|||||++|||||+++
T Consensus 244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~a 323 (1061)
T COG3321 244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANA 323 (1061)
T ss_pred EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccccc
Q psy612 777 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 856 (1005)
Q Consensus 777 l~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~ 856 (1005)
|.++|+... +..+|.|||+|+||||+++|||++|+||++|+|+|++|||++||++|||.++|+.+||+|+++.++|+..
T Consensus 324 L~~v~~~~~-~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~ 402 (1061)
T COG3321 324 LGAVYGEGA-PAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTG 402 (1061)
T ss_pred HHHHhccCC-CCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCC
Confidence 999999877 6789999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCC-CHHH
Q psy612 857 NEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV-CIEN 935 (1005)
Q Consensus 857 ~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~-~l~~ 935 (1005)
. .+|+|+||||||||||+|+|||||++... .. ....+++|+|||||+++|+.++.+|++|++.+... +|.|
T Consensus 403 ~-~prrAgvssfG~gGtNaHvIlEe~~~~~~------~~-~~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~~l~d 474 (1061)
T COG3321 403 G-GPRRAGVSSFGFGGTNAHVILEEAPPRAE------ST-IPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLLSLAD 474 (1061)
T ss_pred C-CCceeeeeccCCCCCceEEEEeecCCccc------CC-CCCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccchHHH
Confidence 4 68999999999999999999999986111 01 11122899999999999999999999999987666 9999
Q ss_pred HHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhccccccccCcccc-----ccccccccCccchHHHHHhhhc
Q psy612 936 FVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLK-----GIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 936 ~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-----~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
+||||+.+|++|++|.++|++|++|+.+.|+.+..++.. ....+. +++.|+|+|||+|+.+|||.||
T Consensus 475 ia~Tl~~gR~~~~~R~~~va~~~eel~~~L~~~~~~~~~--~~~~~~~~~~~~~~vfvf~gqgsq~~~mg~el~ 546 (1061)
T COG3321 475 VAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAK--ALSGVGADDSGKKTVFVFPGQGSQWAGMGRELY 546 (1061)
T ss_pred HHHHHHhhhhhccceeEEEeCCHHHHHHHHHHHhcCCCC--ccceecccCCCCceEEEeCchHHHHHHHHHHHh
Confidence 999999999999999999999999999999999988543 222222 2589999999999999999998
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-106 Score=1065.49 Aligned_cols=537 Identities=26% Similarity=0.436 Sum_probs=477.2
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
+++||||||||+||++.++++||++|.+|+++|+++|.+||+...||+++....++.+++++||+++++ ||+.||+|+|
T Consensus 6 ~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~-FD~~~F~i~p 84 (2582)
T TIGR02813 6 DMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVD-FNPMEFGLPP 84 (2582)
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccC-CCHhhcCCCH
Confidence 578999999999999999999999999999999999999999999999988888999999999999986 9999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc------------------------------
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------------------------------ 591 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~------------------------------ 591 (1005)
+|++.||||||++|+++|||||||||..+ +++.+||||+|++.+.+...
T Consensus 85 ~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (2582)
T TIGR02813 85 NILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIK 163 (2582)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhh
Confidence 99999999999999999999999999754 78899999999876532100
Q ss_pred -------ccccccccccchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHH
Q psy612 592 -------RLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI 664 (1005)
Q Consensus 592 -------~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~ 664 (1005)
.+....++++..+++++||||+|||+||+++|||||||||+|||+||++|++|+||+|||||+|+.++|..+.
T Consensus 164 ~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~ 243 (2582)
T TIGR02813 164 KFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYM 243 (2582)
T ss_pred hhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHH
Confidence 0112345677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHH
Q psy612 665 AMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 744 (1005)
Q Consensus 665 ~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~ 744 (1005)
.|++.++||++|+|||||.++|||++|||+|+||||||++|++|||+|||+|+|+++|+||++.++++|++.+|.++|++
T Consensus 244 ~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~ 323 (2582)
T TIGR02813 244 SFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKR 323 (2582)
T ss_pred HHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCC
Q psy612 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKII 824 (1005)
Q Consensus 745 al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~i 824 (1005)
||++||++|++|+|||+|||||++||++|++||.++|+......++|+|||+|+||||+++|||++++||++|+|+||+|
T Consensus 324 Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 324 AYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred HHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999998765555679999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccCCCCeeecccccccccc-ccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEE
Q psy612 825 PASLHCEKENNYIILKNSPFYINKSNKKWNTV-NEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHM 903 (1005)
Q Consensus 825 pp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~-~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l 903 (1005)
||++||++|||.++++++||+++++.++|+.. .+.+|+++||||||||+|+|+|||+|++.... ..........++
T Consensus 404 Pp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~~~~---~~~~~~~~~~~~ 480 (2582)
T TIGR02813 404 PPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQR---DDQYRQRAVAQT 480 (2582)
T ss_pred CCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecCccccc---cccccccCCcce
Confidence 99999999999999999999999999999743 34579999999999999999999999643211 011112224578
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHhCC---CCCHHHHH--HHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhcccc-----
Q psy612 904 VVLSAKTKISLKEKMKQILLFLRKNN---TVCIENFV--YTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKE----- 973 (1005)
Q Consensus 904 ~~lSa~~~~~l~~~~~~l~~~l~~~~---~~~l~~~a--~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~----- 973 (1005)
|+|||+|+++|...++++.++|.... ...+.+++ ||+..+ .++.||++||++|.+||.+.|+.++..-+
T Consensus 481 ~~lSA~~~~aL~~~l~~~~~~l~~~~~~~~~~~~~la~~~t~~~~-~~~~~R~a~va~~~~el~~~L~~a~~~l~~~~~~ 559 (2582)
T TIGR02813 481 LLFTAANEKALVSSLKDWKNKLSAKADDQPYAFNALAVENTLRTI-AVALARLGFVAKNADELITMLEQAITQLEAKSCE 559 (2582)
T ss_pred eeecCCCHHHHHHHHHHHHHHHhcccccccccHHHHHHHhhhccc-ccCCceEEEEECCHHHHHHHHHHHHHhhhccccc
Confidence 99999999999999999999997542 34578887 555443 45679999999999999999987653211
Q ss_pred ccc-cCc---------cccccccccccCccchHHHHHhhhc
Q psy612 974 KIL-HTN---------YLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 974 ~~~-~~~---------~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
.+. ..+ ...+++.|+|+|||+||.||||.||
T Consensus 560 ~~~~~~g~~~~~~~~~~~~~kvaflFpGQGSQy~gMgreL~ 600 (2582)
T TIGR02813 560 EWQLPSGISYRKSALVVESGKVAALFAGQGSQYLNMGRELA 600 (2582)
T ss_pred cccccccccccccccccCCCceEEEeCCCCchhHHHHHHHH
Confidence 000 001 1247899999999999999999998
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=773.16 Aligned_cols=503 Identities=31% Similarity=0.515 Sum_probs=425.2
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
.+++|+|.||++++|-++|+++||++|++|.|.+++-| .||... +|+-+ +..|-+.++.+||+.||+..
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~-rrW~~G-~ygLP---------~r~gKlKdL~kFDa~ff~vh 77 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDP-RRWEAG-LYGLP---------KRSGKLKDLNKFDAGFFGVH 77 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCc-cccccc-ccCCc---------hhhcchhhhhhhcccccCcC
Confidence 36889999999999999999999999999999999855 467543 33322 23466778999999999999
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc------cccccccccccchhHHHHHHHHHh
Q psy612 541 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------DRLDQVNLTSTHNAILSARLAYFM 614 (1005)
Q Consensus 541 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~a~ris~~~ 614 (1005)
++++..||||.|++||++|||+-|||+.|.+++++++|||+|++..+... ....-+.+++...+|.+|||||.|
T Consensus 78 ~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytF 157 (2376)
T KOG1202|consen 78 PKQANTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTF 157 (2376)
T ss_pred cccccccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEE
Confidence 99999999999999999999999999999999999999999987654221 123345677888999999999999
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCcc
Q psy612 615 DLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694 (1005)
Q Consensus 615 ~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa 694 (1005)
||+|||+.+||+||||+.|+..|++.++.|+||.|||+|+|+.+.|.....|-++|||||+|.|+.||..+|||+|+||+
T Consensus 158 DfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~ 237 (2376)
T KOG1202|consen 158 DFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGV 237 (2376)
T ss_pred eccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEeeeccCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGK-TNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 695 ~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~-~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
++++|.|-+.|. |+||.|....+|.||. ..|+|-|+++.|+++|++.|+++|++|+++-|||+|||||++|||-|
T Consensus 238 ~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQE 313 (2376)
T KOG1202|consen 238 VAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQE 313 (2376)
T ss_pred EEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHH
Confidence 999999999985 6999999999999995 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cCCCCeeecccccc
Q psy612 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKK 852 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~~~~~~v~~~~~~ 852 (1005)
+++|.++|+..+ ..|+.|||+|||+||+|-|||+++|.|.+++|++|.|||++||++|||.|. +-+..+.|.+++.|
T Consensus 314 aN~it~~fC~~R--t~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp 391 (2376)
T KOG1202|consen 314 ANGITRFFCATR--TTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP 391 (2376)
T ss_pred hhhHHHHHhhcC--CCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence 999999999744 567999999999999999999999999999999999999999999999994 78899999999999
Q ss_pred ccccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCCC
Q psy612 853 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVC 932 (1005)
Q Consensus 853 w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~ 932 (1005)
|+. -+.++|||||||+|+|+||+..+... +...+......++..|+||++++++.++.... +.++..
T Consensus 392 ~~G-----GivGiNSFGFGGsN~HviLks~~~~~-----P~~tP~~~~~~l~~~sgRT~eAVeqll~~~~~---n~~D~~ 458 (2376)
T KOG1202|consen 392 WRG-----GIVGINSFGFGGSNAHVILKSNTKPK-----PAPTPHAGLLRLVRASGRTPEAVEQLLEQALR---NSDDLE 458 (2376)
T ss_pred ccC-----ceeeeeccccCCCceeEEeccCCCCC-----CCCCCCCCcceeeecCCCCHHHHHHHHHHHhc---ccchHH
Confidence 974 36789999999999999999765432 11122223457888999999999877665422 222221
Q ss_pred HHH-HHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhccccccccCccccccccccccCccchHHHHHhhhc
Q psy612 933 IEN-FVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 933 l~~-~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
+-. +.--.+.--..+++|-..|...- +-.+.+...-.+ | -.+.|+|+|.|+||.||++.|.
T Consensus 459 ~l~llndi~s~p~~~~pFRGY~vl~~e-~~~~ev~~~~~~-e---------RPiwfiysGMGsQW~~Ma~~LM 520 (2376)
T KOG1202|consen 459 LLSLLNDIASVPAPLHPFRGYAVLGGE-RGGPEVQQVPAG-E---------RPIWFIYSGMGSQWAGMAKDLM 520 (2376)
T ss_pred HHHHHHHHhcCCccCCcccceEEeccc-cCCcceeecCCC-C---------cceEEEEeCCcchhhHHHHHHh
Confidence 111 11111233456778887666554 222222222111 1 2489999999999999999873
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-75 Score=673.00 Aligned_cols=392 Identities=22% Similarity=0.372 Sum_probs=347.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|.+.++++||++|++|+++|++++ +|+... ...+++|++++ ||+.+| ++++
T Consensus 4 ~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~--~~~~~~-----------~~~~~~g~i~~---~~~~~~-~~~~ 66 (414)
T PRK08722 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIE--HFDTTN-----------FSTRFAGLVKD---FNCEEY-MSKK 66 (414)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecC--cccccc-----------CCCceeEEcCC---CChhHc-CCHH
Confidence 689999999999999999999999999999999875 454322 34567788764 999888 8999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||++|+++.++++||+||||++......++|||+|++.+.+.. ...++..+++...+.++++
T Consensus 67 ~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 146 (414)
T PRK08722 67 DARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGN 146 (414)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHH
Confidence 999999999999999999999999988777888999999997664311 1233455677788999999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~ 684 (1005)
||++|||+||+++|+++|+||+.||++|+++|++|+||+|||||++..++|..+..|..+++|| |++.|||||.+
T Consensus 147 is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 226 (414)
T PRK08722 147 LSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKD 226 (414)
T ss_pred HHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999997 56799999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
+|||++|||++++|||++++|+++|++||++|+|+++++|+.+..-..|++.++.++|++||+++|++|+||+|||+|||
T Consensus 227 ~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgt 306 (414)
T PRK08722 227 RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGT 306 (414)
T ss_pred CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCc
Confidence 99999999999999999999999999999999999999998764333445666799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||+.+|++|.+||+++|+... ..+++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.+++.
T Consensus 307 gt~~~D~~E~~al~~~fg~~~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~---- 380 (414)
T PRK08722 307 STPAGDVAEIKGIKRALGEAG--SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDID---- 380 (414)
T ss_pred cCCCCCHHHHHHHHHHhcccC--CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc----
Confidence 999999999999999998642 23489999999999999999999999999999999999999999999987654
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+++.+.++|. ..|++++|||||||+|+|+||++
T Consensus 381 ~v~~~~~~~~----~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 381 LVPHTARKVE----SMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred cCCCccccCC----CCCEEEEecccCCCceEEEEEec
Confidence 3445555553 35889999999999999999975
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-74 Score=675.60 Aligned_cols=392 Identities=26% Similarity=0.372 Sum_probs=343.9
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|||||||+++|++.++++||++|++|++.|++++ ||+...+ ..+++|.++ .||+..| +++
T Consensus 128 ~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~f~~~~~-----------~~~~ag~i~---~f~~~~~-l~~ 190 (540)
T PLN02787 128 QRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIE--RFDCSQF-----------PTRIAGEIK---SFSTDGW-VAP 190 (540)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccC--ccchhhC-----------Ccccccccc---ccChhhc-CCH
Confidence 4689999999999999999999999999999999886 5554322 335566665 4777655 899
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCC---CCCCCceEEEEeeccCCccc------------cccccccccccchhHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPN---QIANQKIGMFVGVEEGSNYQ------------DRLDQVNLTSTHNAIL 606 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~---~~~~~~~Gv~~g~~~~~~~~------------~~~~~~~~~~~~~~~~ 606 (1005)
++++.|||+++++|.++++||+|||++++ .+++.++|||+|+..+.... ..+++..++....++.
T Consensus 191 k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~ 270 (540)
T PLN02787 191 KLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMG 270 (540)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHH
Confidence 99999999999999999999999999764 56788999999997654210 1123333444556778
Q ss_pred HHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCC
Q psy612 607 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVF 681 (1005)
Q Consensus 607 a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pf 681 (1005)
+++|++.||++||+++|++||+||+.||+.|+++|++|+||+|||||++..++|..+..|..+++|| |++.||||
T Consensus 271 a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPF 350 (540)
T PLN02787 271 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPW 350 (540)
T ss_pred HHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999998 56789999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
|.++|||++|||++++|||++++|+++|++|||+|+|+++++||++.....|++.++.++|++||++||++|+||+|||+
T Consensus 351 D~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyIna 430 (540)
T PLN02787 351 DMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINA 430 (540)
T ss_pred ccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEc
Confidence 99999999999999999999999999999999999999999999876666778889999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
|||||++||.+|.+||.++|+.. ..++|+|+|+++||+++|||++++++++++|++|+|||++|+++|+|.++++
T Consensus 431 HGTGT~~gD~~E~~Ai~~~Fg~~----~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~- 505 (540)
T PLN02787 431 HATSTKAGDLKEYQALMRCFGQN----PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK- 505 (540)
T ss_pred cCccCCCCCHHHHHHHHHHhCCC----CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcc-
Confidence 99999999999999999999853 2479999999999999999999999999999999999999999999987653
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+.+..+..+| +.|++++|||||||.|+|+||++|
T Consensus 506 --~~v~~~~~~~-----~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 506 --VLVGPKKERL-----DIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred --cccccccccC-----CcCEEEEeeecCCceeEEEEEEeC
Confidence 2233333334 358899999999999999999976
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=661.21 Aligned_cols=389 Identities=24% Similarity=0.333 Sum_probs=343.3
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|||||||+++|++.++++||++|.+|+++|+++|..+++. .....+++|++. +.||+. +++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~-----------~~~~~~~~g~i~--~~~d~~---~~~ 74 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEE-----------FDLPVRIGGHLL--EEFDHQ---LTR 74 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhc-----------cCCCcceEEEec--cCcccc---CCH
Confidence 4789999999999999999999999999999999987643321 123456788883 468864 789
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ 608 (1005)
++++.|||++|+++.++|+||||||+. ..++.++||++|++.+.... ..+++..+.....+.++.
T Consensus 75 ~~~~~~d~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 152 (418)
T PRK07910 75 VELRRMSYLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAA 152 (418)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHH
Confidence 999999999999999999999999985 35678999999987654211 011233344556677899
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCC-CC-----CCCCCcCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGM-LS-----PDGKCYVFD 682 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~-ls-----~~g~~~pfd 682 (1005)
++++.++++||+++++++|+||++||++|+++|++|+||+|||||++..++|..+..|.++++ +| |++.|||||
T Consensus 153 ~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd 232 (418)
T PRK07910 153 AVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFD 232 (418)
T ss_pred HHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999 87 789999999
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
.++|||++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||+++|++|+||+|||+|
T Consensus 233 ~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 233 KDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred CCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 99999999999999999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
||||++||++|.+||+++|+... ++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.++++-
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~~-----~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~- 386 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGHR-----PAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDV- 386 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCCC-----CceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-
Confidence 99999999999999999998532 468999999999999999999999999999999999999999999987653
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
++. .+|+ ...|++++|||||||+|+|+||+.+
T Consensus 387 ---~~~--~~~~---~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 387 ---VAG--EPRP---GNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred ---CCC--CCcC---CCccEEEEeeecCCCeeEEEEEecC
Confidence 222 2343 3568999999999999999999864
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-73 Score=664.17 Aligned_cols=395 Identities=23% Similarity=0.380 Sum_probs=351.8
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCC-----CCCCCccC
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGI-----DEFDPLFF 537 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~FD~~~f 537 (1005)
++|+|||||+++|.+.++++||++|.+|++.++++|..+|. ....+++|+++++ +.||+.+|
T Consensus 4 ~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~-------------~~~~~~~g~i~~~~~~~~~~fd~~~~ 70 (424)
T PRK06333 4 KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVG-------------DLATKIGGQVPDLAEDAEAGFDPDRY 70 (424)
T ss_pred CCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCccccc-------------CCCCceEEEeccccccccccCChhHc
Confidence 67999999999999999999999999999999999976653 1234677888763 34999998
Q ss_pred CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEeeccCCccc-------------cccccccccccch
Q psy612 538 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHN 603 (1005)
Q Consensus 538 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~-~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~ 603 (1005)
+++++++.|||+++++++++++||+|||+.++.+ ...++|||+|++.+.+.. ..+.+..++....
T Consensus 71 -i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
T PRK06333 71 -LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLT 149 (424)
T ss_pred -CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhh
Confidence 9999999999999999999999999999988877 678999999987654311 1123344556667
Q ss_pred hHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC------CCC
Q psy612 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGK 677 (1005)
Q Consensus 604 ~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~------~g~ 677 (1005)
+.++++||+.|||+||+++|+++|+||+.||++|+++|++|+||+|||||++..++|.....|..++.++. ++.
T Consensus 150 ~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~ 229 (424)
T PRK06333 150 NMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQA 229 (424)
T ss_pred hHHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcC
Confidence 88899999999999999999999999999999999999999999999999999899998888999988874 578
Q ss_pred CcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy612 678 CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 757 (1005)
Q Consensus 678 ~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~ 757 (1005)
|||||.++|||++|||++++|||++++|+++|++||++|+|++.++|+.+.....|++.+++++|++||++||++|+||+
T Consensus 230 ~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId 309 (424)
T PRK06333 230 SRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQ 309 (424)
T ss_pred CCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999987554567888999999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc
Q psy612 758 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 837 (1005)
Q Consensus 758 yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i 837 (1005)
|||+|||||+.+|++|+.+|.++|+. ..+++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.+
T Consensus 310 ~i~~hgtgt~~~D~~E~~al~~~fg~----~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~ 385 (424)
T PRK06333 310 HLNAHATSTPVGDLGEVAAIKKVFGH----VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAA 385 (424)
T ss_pred EEeccCCCCccchHHHHHHHHHHhCC----CCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCc
Confidence 99999999999999999999999983 23589999999999999999999999999999999999999999999987
Q ss_pred ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 838 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 838 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
+.. . +++++.++|+ .|++++|||||||+|+|+||++|.
T Consensus 386 ~~~--~-~~~~~~~~~~-----~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 386 EGL--D-VVANKARPMD-----MDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred ccc--c-cccCCCcccC-----cCEEEEeeecCCCeeEEEEEeccC
Confidence 521 1 4667778885 478999999999999999999863
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-72 Score=646.53 Aligned_cols=382 Identities=21% Similarity=0.312 Sum_probs=336.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+|||||+++|++.++++||++|.+|+++|++++ ||+...+ .++++|.++ .||+.+ .++++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~i~---~~~~~~-~~~~~ 63 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPIT--RFDPSGY-----------PARLAGEVP---DFDAAE-HLPGR 63 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCC--ccccccC-----------CCceeEEeC---CcChhh-cCCHH
Confidence 479999999999999999999999999999999875 5654332 234566665 488775 59999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+.+.|||++|+++.++++||+||||.++.+++.++||++|++.+.+.. ....+...+....+.++++
T Consensus 64 ~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (399)
T cd00832 64 LLPQTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQ 143 (399)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHH
Confidence 999999999999999999999999998888889999999987765321 1122333444556778999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC----CCCCcCCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP----DGKCYVFDERA 685 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~----~g~~~pfd~~a 685 (1005)
||+.||++||+++|+++|+||+.||++|+++|++|+ |++||||++..++|..+..|..+++++. ++.|||||.++
T Consensus 144 is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~ 222 (399)
T cd00832 144 ISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA 222 (399)
T ss_pred HHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence 999999999999999999999999999999999999 9999999999999999999999999985 35899999999
Q ss_pred CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 686 ~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
|||++|||++++|||++++|+++|++|||+|+|+++++||.+.. +++.+|.++|++||+++|++|+||+||++||||
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtg 299 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAG 299 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCc
Confidence 99999999999999999999999999999999999999998643 468999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCee
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~ 845 (1005)
|+.+|+.|.++|+++|+.. .++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.++++ +
T Consensus 300 t~~~D~~E~~al~~~fg~~-----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~----~ 370 (399)
T cd00832 300 VPELDRAEAAALAAVFGPR-----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLD----L 370 (399)
T ss_pred CCCCCHHHHHHHHHHhCCC-----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcc----c
Confidence 9999999999999999853 368999999999999999999999999999999999999999999987644 2
Q ss_pred eccccccccccccCccEEEEcccCCCCceEEEEE
Q psy612 846 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879 (1005)
Q Consensus 846 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 879 (1005)
+..+.+++ +.|++++|||||||+|+|+||
T Consensus 371 v~~~~~~~-----~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 371 VTGRPRPA-----ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCcccCC-----CCCEEEEeccCCCCcceEEEC
Confidence 33332222 468999999999999999996
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-72 Score=652.88 Aligned_cols=409 Identities=23% Similarity=0.314 Sum_probs=352.4
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccC-CcCCCCCccceeeeccC---CCCCCCCccC
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYEN-PIKSSNKINSKWYGSIP---GIDEFDPLFF 537 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~-~~~~~~~~~~~~~g~~~---~~~~FD~~~f 537 (1005)
.++||||||||++|++.++|+||++|++|+++|+++|..||++..++.. .+......+++++|+++ +++.||+.+|
T Consensus 5 ~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 84 (437)
T PLN02836 5 TRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEELW 84 (437)
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHHh
Confidence 5689999999999999999999999999999999999999987765432 22223456778888874 3567999998
Q ss_pred CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEeeccCCccc-------------cccccccccccch
Q psy612 538 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHN 603 (1005)
Q Consensus 538 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~ 603 (1005)
..+ +.||+..+++++++++||+||||.+.. ....++||++|++.+.... ....++.++....
T Consensus 85 ~~~----~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (437)
T PLN02836 85 LNS----RSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILI 160 (437)
T ss_pred ccc----cccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcc
Confidence 653 479999999999999999999997654 4678999999987554211 1234455666778
Q ss_pred hHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCC
Q psy612 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGK 677 (1005)
Q Consensus 604 ~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~ 677 (1005)
++++++||++||++||+++|+++|+||+.||+.|+++|++|+||++||||++..++|..+..|...+.++ |++.
T Consensus 161 n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~ 240 (437)
T PLN02836 161 NMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEA 240 (437)
T ss_pred cHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccc
Confidence 8999999999999999999999999999999999999999999999999999989999988998888876 5678
Q ss_pred CcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy612 678 CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 757 (1005)
Q Consensus 678 ~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~ 757 (1005)
|+|||.++|||++|||++++|||++++|+++|++||++|+|+++++||.+.....|+..++.++|++||++|||+|+||+
T Consensus 241 ~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId 320 (437)
T PLN02836 241 SRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVD 320 (437)
T ss_pred cCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcC
Confidence 99999999999999999999999999999999999999999999999875333333566778899999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc
Q psy612 758 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 837 (1005)
Q Consensus 758 yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i 837 (1005)
|||+|||||++||++|.+++.++|+.... .+.++|+|+|+++||+++|||+++++|++|+|++++|||++|+++|+|.+
T Consensus 321 ~ve~hgtgt~~~D~~E~~ai~~~~~~~~~-~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~ 399 (437)
T PLN02836 321 YVNAHATSTPLGDAVEARAIKTVFSEHAT-SGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIF 399 (437)
T ss_pred EEEccCCcCcCcCHHHHHHHHHHhccccc-CCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 99999999999999999999999986542 34589999999999999999999999999999999999999999999988
Q ss_pred ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 838 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 838 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
+++..+. . +++ ..+.|++++|||||||+|+|+||++.|
T Consensus 400 ~~~~~~~---~---~~~--~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 400 DDGFVPL---T---ASK--AMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CcccCcc---c---CCC--CCCccEEEEecccCCCeeEEEEEecCC
Confidence 7654332 1 111 124689999999999999999998753
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-70 Score=640.33 Aligned_cols=391 Identities=27% Similarity=0.413 Sum_probs=345.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+||||+|++|++.++++||++|++|+++++++|. |+.. .....++|.++ .||+.+| ++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~--~~~~-----------~~~~~~~g~i~---~f~~~~~-~~~~ 64 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITH--FDTS-----------DLAVKIAGEVK---DFNPDDY-MSRK 64 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCc--cccc-----------CCCccEEEEeC---CcChhhc-CCHH
Confidence 5799999999999999999999999999999998873 4322 22346778776 4898888 9999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||+++++++++++||+||||+++++++.++|||+|++.+.... ....+..+++...+.++++
T Consensus 65 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (411)
T PRK07314 65 EARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGH 144 (411)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHH
Confidence 999999999999999999999999999999999999999987654210 1122344556677889999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~ 684 (1005)
||+.||++||+++|+++|+||+.||+.|+++|++|+||++||||++..++|.....|...++++. ++.|+|||.+
T Consensus 145 is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~ 224 (411)
T PRK07314 145 VSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD 224 (411)
T ss_pred HHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999899998889999888874 6889999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
+||+++|||++++||+++++|+++|++||++|+|++.++|+.+.....|...++.++|++||++||++|+||+|||+|||
T Consensus 225 ~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgt 304 (411)
T PRK07314 225 RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGT 304 (411)
T ss_pred CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEcccc
Confidence 99999999999999999999999999999999999999999765445556778999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||+.+|++|.++|.++|+... .+++|+|+|+++||+++|||+++++|++++|+|++|||++||++|+|.++++-.
T Consensus 305 gt~~~d~~E~~al~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~-- 379 (411)
T PRK07314 305 STPAGDKAETQAIKRVFGEHA---YKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV-- 379 (411)
T ss_pred CCccccHHHHHHHHHHhcccC---CCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccc--
Confidence 999999999999999998532 348999999999999999999999999999999999999999999998765422
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+.+. ...+.|+++||||||||+|+|+||++|
T Consensus 380 --~~~~-----~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 380 --PNEA-----RERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred --CCcc-----cCCCCCEEEEecccCCCceEEEEEecC
Confidence 1221 123568999999999999999999986
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-70 Score=627.89 Aligned_cols=383 Identities=26% Similarity=0.359 Sum_probs=332.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+|||||+.+|.+.++++||++|++|+++|++++. |+. ....++++|.++ ||+..+ ++++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~--~~~-----------~~~~~~~~g~~~----~~~~~~-~~~~ 63 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPE--FAE-----------MGMRSQVWGNVK----LDPTGL-IDRK 63 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCc--ccc-----------cCCCCceEEEcC----CChhhc-CCHH
Confidence 4799999999999999999999999999999998764 221 123445666652 776654 6778
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc--------------cccccccccccchhHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a~ 608 (1005)
..+.||+..++.+.++.+||+||||.++++.+.++|||+|+..+.... ....++.++....+++++
T Consensus 64 ~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (406)
T PRK07967 64 VMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSA 143 (406)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHH
Confidence 889999999999999999999999988888889999999987554211 122344556677788999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFD 682 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pfd 682 (1005)
+||+.||++||+++|+++|+||+.||+.|+++|++|+||+|||||++. +.+.....|..++.+| |++.|||||
T Consensus 144 ~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T PRK07967 144 CLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYD 222 (406)
T ss_pred HHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence 999999999999999999999999999999999999999999999997 4556667788889886 567899999
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
.++|||++|||++++|||++++|+++|++|||+|+|+++++||++ +++|++.+|.++|++||+.++ + ||+|||+|
T Consensus 223 ~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~--~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aH 297 (406)
T PRK07967 223 ANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYD--MVAPSGEGAVRCMQMALATVD--T-PIDYINTH 297 (406)
T ss_pred CCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCC--CCCCCHHHHHHHHHHHHhCCC--C-CccEEEcC
Confidence 999999999999999999999999999999999999999999986 689999999999999998654 5 99999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
||||+++|++|.+||+++|+.. .++|+|+|+++||+++|||++++++++++|++++|||++|+++++|.+. +
T Consensus 298 gtGT~~~D~~E~~Ai~~~fg~~-----~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~--~- 369 (406)
T PRK07967 298 GTSTPVGDVKELGAIREVFGDK-----SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA--G- 369 (406)
T ss_pred CCCCCCCCHHHHHHHHHHhCCC-----CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCcccc--C-
Confidence 9999999999999999999752 2689999999999999999999999999999999999999999998752 1
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+.+..+..+| .++|++++|||||||+|+|+||++|
T Consensus 370 -~~~~~~~~~~----~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 370 -MPIVTETTDN----AELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred -CCccCCCCcC----CCCCEEEEecccCCCeeEEEEEEec
Confidence 2223333333 2468899999999999999999986
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-69 Score=627.91 Aligned_cols=387 Identities=25% Similarity=0.358 Sum_probs=344.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+|||||+++|.+.++++||++|.+|++.|++++ ||+.. ...++++|.++ .||+.+| ++++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~--~~~~~-----------~~~~~~~g~i~---~f~~~~~-~~~~ 64 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKIT--LFDAS-----------DFPVQIAGEIT---DFDPTEV-MDPK 64 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCC--Ccccc-----------CCCCceeEEcC---CcChhhc-CCHH
Confidence 479999999999999999999999999999999875 34322 12345667664 4999888 8999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||+++++++++++||+|||+.+.++...++||++|+..+... ...+++..++....++++++
T Consensus 65 ~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (406)
T PRK08439 65 EVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGF 144 (406)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHH
Confidence 99999999999999999999999999888888999999998654321 11234455667778899999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~ 684 (1005)
||+.||++||+++++++|+|++.||++|+++|++|+||++||||++..++|..+..|..++.|| |++.|||||.+
T Consensus 145 is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 224 (406)
T PRK08439 145 ISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD 224 (406)
T ss_pred HHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998 56789999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
++||++|||++++|||++++|+++|++||++|+|++.++|+++ +++|++.++.++|++||+++|+ ++|+|||+|||
T Consensus 225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgt 300 (406)
T PRK08439 225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGT 300 (406)
T ss_pred CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCC--CCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCC
Confidence 9999999999999999999999999999999999999999864 7889999999999999999999 79999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||+.+|.+|.++|.++|+... ..++|+|+|+++||+.+|||++++++++++|++++|||++|+++|+|.++++-
T Consensus 301 gt~~~D~~E~~al~~~f~~~~---~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 374 (406)
T PRK08439 301 STPYNDKNETAALKELFGSKE---KVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDY--- 374 (406)
T ss_pred cCCCCCHHHHHHHHHHhcccC---CCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCccc---
Confidence 999999999999999998642 23689999999999999999999999999999999999999999999876542
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
++.+.++| +.+.+++|||||||+|+|+||++|
T Consensus 375 -~~~~~~~~-----~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 375 -IPNVARKA-----ELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred -CCCccccC-----CCCEEEEeeecCCCceEEEEEecC
Confidence 33444433 468899999999999999999864
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-69 Score=635.63 Aligned_cols=415 Identities=48% Similarity=0.805 Sum_probs=381.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|++.++++||++|.+|+++++++|..||+...++ ...........+++|++++++.||+.+|+++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 79 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYY-PDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPR 79 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccc-cccccCCCcceecceecCCcccCCHhHcCCCHH
Confidence 4699999999999999999999999999999999999999877665 333344566778899999999999999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc------ccccccccccchhHHHHHHHHHhCC
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
+++.|||+++++++++++||+|||+.++++...++||++|+..+++... ..++....+...+..++++++.||+
T Consensus 80 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl 159 (421)
T cd00833 80 EAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL 159 (421)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC
Confidence 9999999999999999999999999998888999999999877654221 1344555666678899999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEE
Q psy612 617 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696 (1005)
Q Consensus 617 ~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~ 696 (1005)
+||+++++++|+|++.||+.|+++|++|+||++||||++...++.....+..++.+++++.|+|||.+++|+++|||+++
T Consensus 160 ~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa 239 (421)
T cd00833 160 RGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGV 239 (421)
T ss_pred CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEE
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 776 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~a 776 (1005)
+||+++++|.++|++||++|+|+++++|+++...+.|+..++.++|++||++||++|+||+|||+|||||+.+|..|.++
T Consensus 240 lvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~a 319 (421)
T cd00833 240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEA 319 (421)
T ss_pred EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999887778899999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccccc
Q psy612 777 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 856 (1005)
Q Consensus 777 l~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~ 856 (1005)
|.++|+.......+++|+|+|+++||+.+|||++++++++++|+++.+||++|+++|+|.+++++++++++++..+|+..
T Consensus 320 l~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (421)
T cd00833 320 LAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAP 399 (421)
T ss_pred HHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCCCccCCCC
Confidence 99999875333445899999999999999999999999999999999999999999999999999999999999999743
Q ss_pred ccCccEEEEcccCCCCceEEEEE
Q psy612 857 NEKLRIGAVSAFGMSGTNAHIVL 879 (1005)
Q Consensus 857 ~~~~r~a~v~sfG~gG~nah~il 879 (1005)
. .+|++++|||||||+|+|+||
T Consensus 400 ~-~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 400 A-GPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred C-CCeEEEEeCcCCCCceeEEeC
Confidence 2 578999999999999999996
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-69 Score=633.62 Aligned_cols=417 Identities=45% Similarity=0.788 Sum_probs=381.9
Q ss_pred EEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccc-cCCcCCCCCccceeeeccCCCCCCCCccCCCChhh
Q psy612 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYY-ENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLE 543 (1005)
Q Consensus 465 IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~e 543 (1005)
|+||||++++|++.++++||++|.+|+++++++|.+||+...++ ++.....++..++++|++++++.||+.+|++++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 78999999999999999999999999999999999999866543 33333444567788999998888999999999999
Q ss_pred hccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc------ccccccccccchhHHHHHHHHHhCCC
Q psy612 544 AERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDLK 617 (1005)
Q Consensus 544 a~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l~ 617 (1005)
.+.|||+++++++++.+||+|||++++++++.++|||+|+..++|... .+.+..+.+...+..+++|+..||++
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~ 160 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR 160 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC
Confidence 999999999999999999999999999988899999999876654321 12334455566778899999999999
Q ss_pred CCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEE
Q psy612 618 GPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 697 (1005)
Q Consensus 618 Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~v 697 (1005)
||+++|+++|+|++.||++|+++|++|+||.+||||++..+++.....|...+.+++++.|+|||.+++||++|||++++
T Consensus 161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q psy612 698 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL 777 (1005)
Q Consensus 698 vLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al 777 (1005)
||+++++|.++|++||++|+|++.++|+++.+++.|+...+.++|++||++||++|+||+||++|||||+.+|..|.++|
T Consensus 241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al 320 (424)
T smart00825 241 VLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEAL 320 (424)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999998878889999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccc
Q psy612 778 HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVN 857 (1005)
Q Consensus 778 ~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~ 857 (1005)
.++|+.......+++|+|+|+++||+.+|||++++++++++|++++|||++|+++|+|.+++...+|+++++..+|+. .
T Consensus 321 ~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 399 (424)
T smart00825 321 AAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWPA-T 399 (424)
T ss_pred HHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCCC-C
Confidence 999987544445689999999999999999999999999999999999999999999999999999999999999973 2
Q ss_pred cCccEEEEcccCCCCceEEEEEecc
Q psy612 858 EKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 858 ~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
..++++++|||||||.|+|+||++|
T Consensus 400 ~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 400 GRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CCccEEEEeccCCCCceEEEEEecC
Confidence 4578999999999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-69 Score=623.16 Aligned_cols=384 Identities=23% Similarity=0.336 Sum_probs=333.1
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|.+.++++||++|.+|++.|+++|. |++. ....++++|.+++ ||+..+ ++++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~--~~~~----------~~~~~~~~~~v~~---~~~~~~-~~~~ 65 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPE--WDRY----------DGLNTRLAAPIDD---FELPAH-YTRK 65 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCc--hhhc----------cCCCCceEEEecC---cChhHh-cCHH
Confidence 4799999999999999999999999999999999984 4321 1234577888765 665433 6888
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCC-CCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGP-NQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~-~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ 608 (1005)
+.+.|||++|+.+.++++||+||||.. ..+.+.++||++|++.+.... ..+++..+.....+.+++
T Consensus 66 ~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 145 (405)
T PRK09116 66 KIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAV 145 (405)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHH
Confidence 999999999999999999999999954 345678999999987654211 112222334455677999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDE 683 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~ 683 (1005)
+||+.|+++||+++|+++|+||+.||+.|+++|++|+||+|||||++. ++|.....|..+++++ |+..|||||+
T Consensus 146 ~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~ 224 (405)
T PRK09116 146 NVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDA 224 (405)
T ss_pred HHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999997 5776677787777664 4668999999
Q ss_pred CCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy612 684 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 763 (1005)
Q Consensus 684 ~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hg 763 (1005)
++|||++|||++++|||++++|+++|++|||+|+|+++++||.+ ++.|+..++.++|+++|+++|++|+||+|||+||
T Consensus 225 ~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~--~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hg 302 (405)
T PRK09116 225 NRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHG 302 (405)
T ss_pred CCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCc--CCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcC
Confidence 99999999999999999999999999999999999999999964 7899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc-ccCCC
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI-ILKNS 842 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i-~~~~~ 842 (1005)
|||+.||++|.+||+++|+. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.+ +++
T Consensus 303 tgt~~~D~~E~~Ai~~~fg~------~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~-- 374 (405)
T PRK09116 303 TATDRGDIAESQATAAVFGA------RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALD-- 374 (405)
T ss_pred ccCCCCCHHHHHHHHHHhCC------CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccC--
Confidence 99999999999999999974 268999999999999999999999999999999999999999999987 342
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
++..+.++|+ .+++++|||||||+|+|+||+
T Consensus 375 --~v~~~~~~~~-----~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 375 --YIMGEAREID-----TEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred --ccCCCCccCC-----CCEEEEeeecCCcccEEEEEC
Confidence 4555555553 478999999999999999984
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=623.97 Aligned_cols=389 Identities=27% Similarity=0.432 Sum_probs=344.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+||||++++|++.++++||++|.+|++.+++++ +|+... ...+++|++++ ||+.+| ++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~--~~~~~~-----------~~~~~~g~i~~---f~~~~~-~~~~ 63 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPIT--RFDASD-----------LPVKIAGEVKD---FDPEDY-IDKK 63 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECC--cccccC-----------CCCcEEEEeCC---cChhhc-CCHH
Confidence 379999999999999999999999999999999886 344322 23457787764 999999 9999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||+++++++++++||+|||+.+++++..++|||+|+..+.+.. ....+..+++...+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (407)
T TIGR03150 64 EARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQ 143 (407)
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHH
Confidence 999999999999999999999999999999999999999986553211 1123344566677889999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~ 684 (1005)
|++.||++||+++|+++|+||+.||++|+++|++|+||++||||++..++|.....|...+.++. .+.|+|||.+
T Consensus 144 is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 223 (407)
T TIGR03150 144 ISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD 223 (407)
T ss_pred HHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999899999888999888874 5679999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
++||++|||++++||+++++|.++|++||++|+|++.++|+.+.....|+..+|.++|++||++||++|+||+|||+|||
T Consensus 224 ~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~t 303 (407)
T TIGR03150 224 RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGT 303 (407)
T ss_pred CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCC
Confidence 99999999999999999999999999999999999999998764444556788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||+++|++|+.++.++|+... .+++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.+++.
T Consensus 304 gt~~~D~~E~~a~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~---- 376 (407)
T TIGR03150 304 STPLGDKAETKAIKRVFGDHA---YKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLD---- 376 (407)
T ss_pred CCCCCCHHHHHHHHHHhccCC---CCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 999999999999999998642 3489999999999999999999999999999999999999999999987653
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+++.+..+| +.|++++|||||||+|+|+||+
T Consensus 377 ~v~~~~~~~-----~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 377 YVPNEARER-----KIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred ccCCCCccC-----CcCEEEEecccCCCceEEEEeC
Confidence 233344444 3588999999999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-70 Score=569.32 Aligned_cols=396 Identities=26% Similarity=0.414 Sum_probs=353.6
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+|+|||+..|.+.+++++|++|++|+++|+.+.. .+++ ..+++..|.|+. |+.+-| +++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~--~d~k-----------~~p~~v~g~Ip~---f~~e~~-~s~ 85 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEG--PDYK-----------SIPFTVAGKIPR---FSVEDY-VSK 85 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccc--cccc-----------cCcchheeeccc---cccccc-cch
Confidence 67899999999999999999999999999999998764 2222 234446677765 666544 799
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCC---CCCceEEEEeeccCCc-------------cccccccccccccchhH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQI---ANQKIGMFVGVEEGSN-------------YQDRLDQVNLTSTHNAI 605 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~---~~~~~Gv~~g~~~~~~-------------~~~~~~~~~~~~~~~~~ 605 (1005)
.+.+.|++...++|.++.|||+|||+.+..+ +..++||.+|+..++. ...+++|+.++-...||
T Consensus 86 ~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM 165 (440)
T KOG1394|consen 86 GDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNM 165 (440)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhccc
Confidence 9999999999999999999999999987633 4567999999987752 12356788888889999
Q ss_pred HHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC---C--CCCcC
Q psy612 606 LSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP---D--GKCYV 680 (1005)
Q Consensus 606 ~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~---~--g~~~p 680 (1005)
.++.||..+||+||+.++.|||++|..+|.-|.+.||.|+.|++|+||++..++|....+|.+.+.||. + -.|||
T Consensus 166 ~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRP 245 (440)
T KOG1394|consen 166 AAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRP 245 (440)
T ss_pred ccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 3 37999
Q ss_pred CCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy612 681 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 681 fd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve 760 (1005)
||.++||||.|||+|++|||+|++|.++|++|||+|.|++++.|.++..-+.|++.+...+|++||++||+.|+||+||+
T Consensus 246 fD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvN 325 (440)
T KOG1394|consen 246 FDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVN 325 (440)
T ss_pred CccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeee
Confidence 99999999999999999999999999999999999999999999999777778889999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
+|+|.|++||.+|.+|++++|++.... .+|.|+|+.|||+.+|||.+..|-++++++++++||++|++.|.+.++++
T Consensus 326 AHATST~~GD~aE~~Ai~~vf~~~~~~---~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~ 402 (440)
T KOG1394|consen 326 AHATSTPLGDAAEAEAIKRVFGEHNIA---SKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLD 402 (440)
T ss_pred cccccCcCchHHHHHHHHHHhccCCcc---cccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccc
Confidence 999999999999999999999976543 37999999999999999999999999999999999999999999977665
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
|++....+|.. +.++|+++.|||||||+|+.+++..|
T Consensus 403 ----~~~~~~~~~~~-~~~~~valsNSFGFGGtNaSl~fa~~ 439 (440)
T KOG1394|consen 403 ----YVPLKASEKKG-GNKVRVALSNSFGFGGTNASLCFAKF 439 (440)
T ss_pred ----ccccccccccc-cccceEEEecccccCCcchhheeeec
Confidence 44555666754 24579999999999999999999765
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-68 Score=617.34 Aligned_cols=397 Identities=23% Similarity=0.330 Sum_probs=344.6
Q ss_pred cccCCCCCHHHHHHHHHcCCccccccCcccccccccccC---CcCCCCCccceeeeccCCCCCCCCccCCCChhhhccCC
Q psy612 472 GRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYEN---PIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMD 548 (1005)
Q Consensus 472 ~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~md 548 (1005)
++.|.+.++|+||++|++|+++|+++|+.+|+...++.. ........+++++|+++.. .||+.+|+..++ +|
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~f~~~~~~~~~~----~~ 75 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-EFDPSDFAPTKR----ES 75 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcc-cCChhHcCCccc----CC
Confidence 357999999999999999999999999887655433221 1112345677899998653 699999876653 59
Q ss_pred HHHHHHHHHHHHHHHhcCCC-CCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHHHHHHh
Q psy612 549 PRQRHLLQESWLALEDAGYG-PNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFM 614 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~-~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ris~~~ 614 (1005)
|+++++++++++||+|||+. ++.+...++||++|++.+.+.. ..+++..+++...+.++++||+.|
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 99999999999999999998 7788889999999987654321 112344566777889999999999
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCCCCCCCCc
Q psy612 615 DLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGL 688 (1005)
Q Consensus 615 ~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~a~G~ 688 (1005)
||+||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.+++.++ |++.|+|||.+++|+
T Consensus 156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 235 (421)
T PTZ00050 156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235 (421)
T ss_pred CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence 99999999999999999999999999999999999999999988999999999999886 567899999999999
Q ss_pred eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCC
Q psy612 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK-SNLNPEDINYIITHGTGTK 767 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~-agi~~~~I~yve~hgtgt~ 767 (1005)
++|||++++|||++++|+++|++|||+|+|+++++||.+.....|++.++.++|++||++ ||++|+||+|||+|||||+
T Consensus 236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~ 315 (421)
T PTZ00050 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP 315 (421)
T ss_pred eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence 999999999999999999999999999999999999987666677889999999999999 9999999999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 768 LGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 768 ~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
++|++|+++|.++|+... .++++|+|+|+++||+++|||+++++|++++|++++|||++||++|+|.++ +.+.
T Consensus 316 ~~D~~E~~al~~~~~~~~--~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-----l~~~ 388 (421)
T PTZ00050 316 IGDKIELKAIKKVFGDSG--APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECD-----LNLV 388 (421)
T ss_pred CCCHHHHHHHHHHhcccc--CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCC-----cccc
Confidence 999999999999998643 145899999999999999999999999999999999999999999999775 3344
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
....+|+. .+.|++++|||||||+|+|+||+++
T Consensus 389 ~~~~~~~~--~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 389 QGKTAHPL--QSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred CCcccCcC--CCCCEEEEeeecCCCeeEEEEEeCC
Confidence 44455542 2468999999999999999999863
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=614.80 Aligned_cols=382 Identities=25% Similarity=0.371 Sum_probs=341.1
Q ss_pred cEEEEeeccccCCCCC---HHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 464 LIAIIGMSGRFPAARN---INEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 464 ~IaIvG~~~~~P~~~~---~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
+|+|+||++++|.+.+ +++||++|.+|+++++++|..+ ......++|++++ || ++
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~--------------~~~~~~~~g~i~~---~~-----~~ 59 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK--------------SRFDRGVAGQIPT---GD-----IP 59 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc--------------ccCCccEEEEccC---CC-----cC
Confidence 6999999999999999 9999999999999999988653 1223466777764 44 67
Q ss_pred hhhhccC---CHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEeeccCCcccc---------ccccccccccch--hH
Q psy612 541 PLEAERM---DPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNYQD---------RLDQVNLTSTHN--AI 605 (1005)
Q Consensus 541 ~~ea~~m---dpq~rl~L~~a~~AledAG~~~~~-~~~~~~Gv~~g~~~~~~~~~---------~~~~~~~~~~~~--~~ 605 (1005)
+++++.| ||++++.++++++||+|||+.+++ +...++|||+|+..+.+... ...+...+.... ++
T Consensus 60 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (407)
T cd00828 60 GWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNT 139 (407)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccch
Confidence 8888888 999999999999999999999888 88899999999876643211 123344445555 88
Q ss_pred HHHHHHHHhCC-CCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC-----CCCc
Q psy612 606 LSARLAYFMDL-KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCY 679 (1005)
Q Consensus 606 ~a~ris~~~~l-~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~-----g~~~ 679 (1005)
++++|++.|++ +||+++|+++|+|++.||++|+++|++|+||+|||||++... |.....|..++.++.+ +.|+
T Consensus 140 ~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~ 218 (407)
T cd00828 140 VAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSR 218 (407)
T ss_pred HHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccC
Confidence 99999999999 999999999999999999999999999999999999999877 8889999999999965 7999
Q ss_pred CCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy612 680 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 759 (1005)
Q Consensus 680 pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yv 759 (1005)
|||.+++||++|||++++|||++++|.++|++|||+|+|++.++||.+.+... +..++.++|++||++||++|+||+||
T Consensus 219 pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i 297 (407)
T cd00828 219 PFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVI 297 (407)
T ss_pred CCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999998766554 88999999999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccccc
Q psy612 760 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 839 (1005)
Q Consensus 760 e~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~ 839 (1005)
|+|||||+.+|++|.++|+++|+... .+++|+|+|+++||+++|||+++++|++++|+|++|||++|+++|||.++
T Consensus 298 ~~hgtgt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~- 373 (407)
T cd00828 298 SAHGTSTPANDVAESRAIAEVAGALG---APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVE- 373 (407)
T ss_pred ecccccCccccHHHHHHHHHHHhccC---CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccc-
Confidence 99999999999999999999998653 34799999999999999999999999999999999999999999999873
Q ss_pred CCCCeeeccccccccccccCccEEEEcccCCCCceEEEEE
Q psy612 840 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879 (1005)
Q Consensus 840 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 879 (1005)
.++++++.++|+.. +|++++|||||||+|+|+||
T Consensus 374 ---~~~~~~~~~~~~~~---~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 374 ---HLSVVGLSRDLNLK---VRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ---cccccCcCccCCCC---ccEEEEecccCCCcceEEEC
Confidence 45678888899632 58899999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-67 Score=614.13 Aligned_cols=388 Identities=27% Similarity=0.437 Sum_probs=346.4
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+||||+|++|++.+.++||++|.+|+++++++|..++ ......++|++++ ||+. |.++++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~-------------~~~~~~~~~~i~~---~~~~-~~~~~~ 63 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDA-------------SGFPSRIAGEVPD---FDPE-DYLDRK 63 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccc-------------cCCCccEEEEcCC---CChh-hcCCHH
Confidence 3799999999999999999999999999999999986432 1234567788765 7766 789999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||+++++++++++||+|||++++++...++|||+|++.+.+.. ..+++..++....+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (406)
T cd00834 64 ELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQ 143 (406)
T ss_pred HhccCCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHH
Confidence 999999999999999999999999999999999999999987765311 0123344455566788999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC-----CCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~-----g~~~pfd~~ 684 (1005)
|++.||++||+++|+++|+|++.||+.|+++|++|+||.+||||++...+|.....|...++++.+ +.|+|||.+
T Consensus 144 ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 144 VAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred HHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998889999999999999876 589999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
++|+++|||++++|||++++|.++|++||++|+|++.++|+.+.....|+..+|.++|+++|+++|++++||+|||+|||
T Consensus 224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~t 303 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGT 303 (406)
T ss_pred CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccc
Confidence 99999999999999999999999999999999999999999875545556899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||+.+|++|.++|.++|+.. ..+++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||..+++
T Consensus 304 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~---- 376 (406)
T cd00834 304 STPLNDAAESKAIKRVFGEH---AKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLD---- 376 (406)
T ss_pred cCccccHHHHHHHHHHhccc---CCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 99999999999999999864 23589999999999999999999999999999999999999999999855433
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEE
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 879 (1005)
.++.+.++|+ .|+++||||||||+|+|+||
T Consensus 377 ~~~~~~~~~~-----~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 377 YVPNEAREAP-----IRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccCCCCcccc-----ccEEEEeeecCCceeeEEEC
Confidence 3445778886 37899999999999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-66 Score=598.19 Aligned_cols=389 Identities=21% Similarity=0.285 Sum_probs=328.4
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|.+.++++||++|++|+++|+++|..++. .++....+...+.++|.+++ ||+..+ ++++
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~ 72 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQ-----VPDDAGAGLASAFIGAELDS---LALPER-LDAK 72 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCccccc-----ccccccccCCCceEEEEeCC---CChhhc-CCHH
Confidence 57999999999999999999999999999999998864321 00111112334567888875 444332 6788
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc------------ccccccccccccchhHHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY------------QDRLDQVNLTSTHNAILSARL 610 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~------------~~~~~~~~~~~~~~~~~a~ri 610 (1005)
..+.||++++++++++++||+|||+. .....++|||+|++..... ...+.+.......++.++++|
T Consensus 73 ~~r~~~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 150 (410)
T PRK07103 73 LLRRASLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLC 150 (410)
T ss_pred HhhcCCHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHH
Confidence 88999999999999999999999994 4567899999997643211 011122233344566789999
Q ss_pred HHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-------CCCCCcCCCC
Q psy612 611 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-------PDGKCYVFDE 683 (1005)
Q Consensus 611 s~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-------~~g~~~pfd~ 683 (1005)
|+.||++||+++++++|+|++.||++|+++|++|+||+|||||++..++|.....|..++.++ |++.|||||.
T Consensus 151 a~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~ 230 (410)
T PRK07103 151 SEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ 230 (410)
T ss_pred HHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC
Confidence 999999999999999999999999999999999999999999999889999999999998875 5679999999
Q ss_pred CCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy612 684 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 763 (1005)
Q Consensus 684 ~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hg 763 (1005)
++|||++|||++++|||++++|.++|++||++|+|+++++||++ ++.|+..++.++|++||++||++|+||+|||+||
T Consensus 231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~--~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hg 308 (410)
T PRK07103 231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHG 308 (410)
T ss_pred CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccC
Confidence 99999999999999999999999999999999999999999976 6789999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCc-ccccccCCC
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE-NNYIILKNS 842 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~-n~~i~~~~~ 842 (1005)
|||+.+|+.|.++| |+.. ..+++|+|+|+++||+.+|||++++++++++|++++|||++|+++| +|.+++
T Consensus 309 tgt~~~D~~E~~al---~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~--- 379 (410)
T PRK07103 309 TGSPLGDETELAAL---FASG---LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRW--- 379 (410)
T ss_pred CCCCCCCHHHHHHH---hcCC---CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCc---
Confidence 99999999999999 3322 2348999999999999999999999999999999999999999987 655432
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+..+ ++ ....|++++|||||||+|+|+||++
T Consensus 380 ---v~~~--~~---~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 380 ---VGST--AE---SARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred ---cCCC--Cc---CCCCCEEEEecccCCCceEEEEEeC
Confidence 2221 11 1246899999999999999999974
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-64 Score=572.86 Aligned_cols=364 Identities=25% Similarity=0.364 Sum_probs=309.1
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+|||||++.|.+. +++||++|++|+++|.+++.. +. + + .|...+++..+
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~--~~--~----~------------------~~~~~~~~~~~- 53 (381)
T PRK05952 2 MKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPF--PE--L----P------------------PLPLGLIGNQP- 53 (381)
T ss_pred CeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcc--cc--c----c------------------cccceeecccc-
Confidence 5799999999999999 999999999999999987642 10 0 0 01001111111
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc------cc----------ccccccccccchhHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY------QD----------RLDQVNLTSTHNAIL 606 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~------~~----------~~~~~~~~~~~~~~~ 606 (1005)
..++ |+...++.+||+|||+.+. ..++||++|++.+... .. .+.+..+.....+.+
T Consensus 54 --~~~~---~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 125 (381)
T PRK05952 54 --SSLE---DLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQA 125 (381)
T ss_pred --cccc---HHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHH
Confidence 1133 4566899999999999753 3789999999765411 00 112223345567789
Q ss_pred HHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC
Q psy612 607 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN 686 (1005)
Q Consensus 607 a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~ 686 (1005)
++++|+.|+++||+++++++|+||+.||..|+++|++|+||++||||++..++|.....|..++++++++ |||||.++|
T Consensus 126 a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~-~rPfd~~r~ 204 (381)
T PRK05952 126 AIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTG-AYPFDRQRE 204 (381)
T ss_pred HHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCC-CCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999989999999999999999875 999999999
Q ss_pred CceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy612 687 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGT 766 (1005)
Q Consensus 687 G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt 766 (1005)
||++|||++++|||++++|+++|++|||+|+|+++++||.+.....|+...+.++|++||+++|++|+||+|||+|||||
T Consensus 205 G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt 284 (381)
T PRK05952 205 GLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTAT 284 (381)
T ss_pred CccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCC
Confidence 99999999999999999999999999999999999999988777788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeee
Q psy612 767 KLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYI 846 (1005)
Q Consensus 767 ~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v 846 (1005)
+.+|++|.++|+++|+. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|++.+++..
T Consensus 285 ~~~D~~E~~al~~~fg~------~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~----- 353 (381)
T PRK05952 285 RLNDQREANLIQALFPH------RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVR----- 353 (381)
T ss_pred CCCcHHHHHHHHHHcCC------CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCC-----
Confidence 99999999999999973 2789999999999999999999999999999999999999999876544321
Q ss_pred ccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 847 NKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 847 ~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+++ ..+.|++++|||||||+|+|+||+.
T Consensus 354 --~~~-----~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 354 --QAQ-----QSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred --Ccc-----cCCCCEEEEeeecCCCeeEEEEEeC
Confidence 111 1346889999999999999999973
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=555.50 Aligned_cols=390 Identities=27% Similarity=0.380 Sum_probs=338.2
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+|+||+...|.+.+.+++|++|..|++.|..++. |+...+ .++..|.+.+ | +.+ +++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~--~~~~~~-----------~~~~~~~i~~---~-~~~--~~~ 62 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITR--FDASGL-----------GVKIAGEIKD---L-DDQ--IAK 62 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCcccc--ccccCC-----------CCcccccccc---c-ccc--cch
Confidence 46799999999999999999999999999998887664 332222 2344444443 4 222 577
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEEeeccCCccc--------------cccccccccccchhHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAIL 606 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~-~~Gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~ 606 (1005)
++.++||+.+++.+.++.+||+|||+. ...... ++||++|+..++... ..+++...+....++.
T Consensus 63 ~~~~~~d~~~~~a~~Aa~eAl~dAgl~-~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 141 (412)
T COG0304 63 KERRFMDRFSQLAVVAAVEALEDAGLD-NELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLA 141 (412)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHcCCC-cccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchH
Confidence 788899999999999999999999998 333333 899999987665321 1135566777888999
Q ss_pred HHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC-----CCCcCC
Q psy612 607 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCYVF 681 (1005)
Q Consensus 607 a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~-----g~~~pf 681 (1005)
++.+|..|+++||++++.+||+||..||..|++.|+.|++|++||||++..+++.....|..++.||.+ ..||||
T Consensus 142 a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPf 221 (412)
T COG0304 142 AGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPF 221 (412)
T ss_pred HHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999864 689999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
|+++|||+.|||+|++|||++++|+++|.+|||+|.|++.+.|+++.+...|++++..++|+.||++||++|+||+||.+
T Consensus 222 d~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYina 301 (412)
T COG0304 222 DKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINA 301 (412)
T ss_pred CCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 99999999999999999999999999999999999999999999998877888999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
|||||+.+|..|..+|+++|+....+ ++|.|.|+.+||+.+|+|..++|-++|+|+++++||++|+++|.|.. .
T Consensus 302 HgTsT~~nD~~E~~ai~~vfg~~~~~---~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~---~ 375 (412)
T COG0304 302 HGTSTPANDKAESLAIKRVFGEHAKS---LPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEA---A 375 (412)
T ss_pred CCccCCCccHHHHHHHHHHhcccccC---ceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccc---c
Confidence 99999999999999999999976433 78999999999999999999999999999999999999999999842 1
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
..-+++.+.+.+ ..++++.|||||||+|+.+++..+
T Consensus 376 ~l~~v~~~~~~~-----~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 376 DLDVVPNEARTG-----AVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred cccccCCccccc-----ceeEEEecccccCCcceEEEEecC
Confidence 122344433322 268999999999999999999875
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-62 Score=565.90 Aligned_cols=388 Identities=23% Similarity=0.334 Sum_probs=325.8
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
...+|+|||||++.|.+.++++||++|.+|++.|++++ +|+.. ...++++|.++ .|++.+
T Consensus 9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~--~~~~~-----------~~~~~~~g~~~---~~~~~~---- 68 (425)
T PRK06501 9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT--RFPTE-----------GLRTRIAGTVD---FLPESP---- 68 (425)
T ss_pred CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCC--ccccc-----------CCCCceEEEEe---eccccc----
Confidence 35679999999999999999999999999999999875 34321 22456777763 122222
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCC--------------CCceEEEEeeccCCcc--ccc-------ccccc
Q psy612 541 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIA--------------NQKIGMFVGVEEGSNY--QDR-------LDQVN 597 (1005)
Q Consensus 541 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~--------------~~~~Gv~~g~~~~~~~--~~~-------~~~~~ 597 (1005)
...++..+++.+.++++||+|||+...++. ..++|++.+....... ... ..+..
T Consensus 69 ---~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (425)
T PRK06501 69 ---FGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDAL 145 (425)
T ss_pred ---ccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChh
Confidence 224778899999999999999999643322 3577887776543211 000 00111
Q ss_pred ccccchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC----
Q psy612 598 LTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS---- 673 (1005)
Q Consensus 598 ~~~~~~~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls---- 673 (1005)
+.....+.++++|++.|+++||+++|+++|+|++.||++|+++|++|+||++||||++..++|..+..|..++.+|
T Consensus 146 ~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~ 225 (425)
T PRK06501 146 HERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQND 225 (425)
T ss_pred hhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCC
Confidence 2233445789999999999999999999999999999999999999999999999999989999999999998887
Q ss_pred -CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy612 674 -PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 752 (1005)
Q Consensus 674 -~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~ 752 (1005)
+++.|||||.+++||++|||++++|||++++|.++|++||++|.|++.++|+.+.....|+...+.++|++||+++|++
T Consensus 226 ~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~ 305 (425)
T PRK06501 226 PPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLT 305 (425)
T ss_pred CCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5679999999999999999999999999999999999999999999999999877667889999999999999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCC
Q psy612 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 832 (1005)
Q Consensus 753 ~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 832 (1005)
|+||+||++|||||+.+|+.|..+|.++|+.. ...++|+|+|+++||+.+|||++++++++++|++++|||++|+++
T Consensus 306 p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~---~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~ 382 (425)
T PRK06501 306 PEQIDYINAHGTSTPENDKMEYLGLSAVFGER---LASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDN 382 (425)
T ss_pred HHHcCEEEecCccCcchHHHHHHHHHHHhccc---CCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCC
Confidence 99999999999999999999999999999743 234899999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 833 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 833 ~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
|+|.++++- ++....+ .+.+.+++|||||||+|+|+||+++|
T Consensus 383 ~~~~~~~~~----~~~~~~~-----~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 383 PDPAIPLDV----VPNVARD-----ARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCccc----CCCcccC-----CCCCEEEEeCccCCCeeEEEEEecCC
Confidence 999886543 2222222 24688999999999999999999875
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-62 Score=544.11 Aligned_cols=321 Identities=26% Similarity=0.354 Sum_probs=288.0
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHHHHHH
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSARLAYF 613 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ris~~ 613 (1005)
||+.+++.+.++++|++|||+. .+..++||++|++.+.... ..+++..++....++++++||+.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 6788999999999999999976 4567899999997665311 12345556777889999999999
Q ss_pred hCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCCCCCCCC
Q psy612 614 MDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANG 687 (1005)
Q Consensus 614 ~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~a~G 687 (1005)
|||+||+++++++|+||+.||+.|+++|++|+||+|||||++..++|..+..|..+++|+ |++.|||||+++||
T Consensus 78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 157 (342)
T PRK14691 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG 157 (342)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999887 66899999999999
Q ss_pred ceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy612 688 LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 767 (1005)
Q Consensus 688 ~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~ 767 (1005)
|++|||++++||+++++|+++|++||++|+|++.++|+.+.....|++.++.++|++||+++|++|+||+|||+|||||+
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~ 237 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTP 237 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCc
Confidence 99999999999999999999999999999999999999876666889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 768 LGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 768 ~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
++|++|.+||+++|+.. ..++|+|+|+++||+++|||++++++++|+|++++|||++|+++|+|.++ +.+ ++.
T Consensus 238 ~~D~~E~~Ai~~~fg~~----~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~--~~~-~v~ 310 (342)
T PRK14691 238 VGDLGEINAIKHLFGES----NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAK--GLN-IIA 310 (342)
T ss_pred CCCHHHHHHHHHHhCCC----CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCcccc--ccC-ccc
Confidence 99999999999999853 24899999999999999999999999999999999999999999999763 122 233
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
.+.++| +.|++++|||||||+|+|+||+++
T Consensus 311 ~~~~~~-----~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 311 GNAQPH-----DMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCCccC-----CCCEEEEeCccCCCeeEEEEEeec
Confidence 444444 368899999999999999999976
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=528.72 Aligned_cols=362 Identities=16% Similarity=0.180 Sum_probs=301.5
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+|||||++.|.+.++|+||++|++|++. +.++..+|+. ..... +.++ .|+. + +++
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~-------------~~~~~---~~~~-~~~~-~--~~~ 63 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAP-------------YPVHP---LPEI-DWSQ-Q--IPK 63 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccC-------------cCccc---cccc-Chhh-c--CCc
Confidence 46899999999999999999999999999997 3332222211 01111 1222 1332 2 445
Q ss_pred h-hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------------------ccccc
Q psy612 542 L-EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------------------DRLDQ 595 (1005)
Q Consensus 542 ~-ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------------------~~~~~ 595 (1005)
+ +.+.||+.+|+.+.++.+||+|||+........++||++|++.+.... ..+++
T Consensus 64 ~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 143 (398)
T PRK06519 64 RGDQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRP 143 (398)
T ss_pred hhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccCh
Confidence 5 678999999999999999999999976555667999999997654210 11344
Q ss_pred ccccccchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC
Q psy612 596 VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD 675 (1005)
Q Consensus 596 ~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~ 675 (1005)
..++...++.++++||+.|+++||+++|+++|+||+.||++|+++|++|+||++||||++..++|.....|..++.++.+
T Consensus 144 ~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~ 223 (398)
T PRK06519 144 TLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG 223 (398)
T ss_pred hhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC
Confidence 55667788899999999999999999999999999999999999999999999999999998999999999999999864
Q ss_pred CCCcC-CCC---CCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy612 676 GKCYV-FDE---RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNL 751 (1005)
Q Consensus 676 g~~~p-fd~---~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi 751 (1005)
.|+| ||. +++||++|||++++|||++++|+++|++|||+|+|++.++++ ++..+++++|++||++||+
T Consensus 224 -~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~-------~~~~~~~~am~~AL~~Agl 295 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR-------RAPGDLEASLERLLKPAGG 295 (398)
T ss_pred -CCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC-------CChHHHHHHHHHHHHHCCC
Confidence 6777 666 699999999999999999999999999999999999654332 1346889999999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCC
Q psy612 752 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831 (1005)
Q Consensus 752 ~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 831 (1005)
|+||+||++|||||+++|..|.+||+++|+ .+|+|+|+++||+.+|||++++++++|+|++++|||++|+
T Consensus 296 -~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~--------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~- 365 (398)
T PRK06519 296 -LAAPTAVISGATGAHPATAEEKAALEAALA--------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA- 365 (398)
T ss_pred -cccCCEEEeCCCCCCCccHHHHHHHHHHcC--------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC-
Confidence 899999999999999999999999999995 3699999999999999999999999999999999999997
Q ss_pred CcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 832 ~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+|.. | .....+.+.|++||++|--...++|.
T Consensus 366 --~~~~--------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 366 --SGEK--------------P---MSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --Cccc--------------C---ccccccEEEEEeeccCCcceeEEEEe
Confidence 2221 1 11345788999999999888877764
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-58 Score=527.54 Aligned_cols=373 Identities=22% Similarity=0.312 Sum_probs=310.6
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCC-ccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNK-DVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~-~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
++|+|||||+..|.+.++++||++|++|+ +.|++++. |+.. ...+.|.+++ ||. ..+++
T Consensus 2 ~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~--~~~~-------------~~~~~g~~~~---~~~--~~~~~ 61 (392)
T PRK09185 2 TPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDF--WLVD-------------LPTWVGEVVG---VEL--PALPA 61 (392)
T ss_pred CcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcc--cccc-------------CCeEEEEecC---ccc--ccCCH
Confidence 47999999999999999999999999999 99998763 2210 1123344443 553 22677
Q ss_pred hhhccCCHHHHHHHHHHHH---HHHhcCCCCCCCCCCceEEEEeeccCCccc------c------c-cccccccccchhH
Q psy612 542 LEAERMDPRQRHLLQESWL---ALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------D------R-LDQVNLTSTHNAI 605 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~---AledAG~~~~~~~~~~~Gv~~g~~~~~~~~------~------~-~~~~~~~~~~~~~ 605 (1005)
+..+.|++..|+.+.++.+ |++|++ .+....++||++|++.+.... . . ..+..++....+.
T Consensus 62 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (392)
T PRK09185 62 ALAAFDCRNNRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGS 138 (392)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccH
Confidence 7788899988887766655 566665 344567899999987654211 0 0 0123334456678
Q ss_pred HHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCC
Q psy612 606 LSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 685 (1005)
Q Consensus 606 ~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a 685 (1005)
.+++|++.||++||+++++++|+|++.||+.|+++|++|+||.+||||++. +++.....|..+++++. +.|+|||.++
T Consensus 139 ~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-~~~~Pfd~~~ 216 (392)
T PRK09185 139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-QPCRPFSANR 216 (392)
T ss_pred HHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC-CccCCCcCCC
Confidence 999999999999999999999999999999999999999999999999996 56667778888888885 6899999999
Q ss_pred CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 686 ~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
+|+++|||++++||+++ +++++ +|.|++.++|+.+.....|+..++.++|++||++||++|+||+|||+||||
T Consensus 217 ~G~~~gEGaa~vVLe~~-----~~~~~--~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtg 289 (392)
T PRK09185 217 DGINIGEAAAFFLLERE-----DDAAV--ALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTA 289 (392)
T ss_pred CccceeceEEEEEEEEc-----CCCcE--EEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCC
Confidence 99999999999999987 34444 699999999998876678888999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCee
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~ 845 (1005)
|+.+|++|..+|.++|+.. .||+|+|+++||+++|||++++++++++|+++++||++|+++++|.+++. +
T Consensus 290 t~~~D~~E~~al~~~f~~~------~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----~ 359 (392)
T PRK09185 290 TPLNDAMESRAVAAVFGDG------VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPL----Y 359 (392)
T ss_pred CcCCCHHHHHHHHHHhCCC------CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence 9999999999999999752 46999999999999999999999999999999999999999999987643 4
Q ss_pred eccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 846 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 846 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
++.+..+| .+|++++|||||||+|+|+||++.
T Consensus 360 ~~~~~~~~-----~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 360 LVENAQAL-----AIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred cCCCCccC-----CCCEEEEeCccCCceeEEEEEEeC
Confidence 44555555 358899999999999999999863
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=381.33 Aligned_cols=241 Identities=35% Similarity=0.570 Sum_probs=205.8
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||++++|++.++++||++|.+|+++++++|. ||+...++..+....++.+.+++++++ .+.||+.+|+++++
T Consensus 2 ~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (254)
T PF00109_consen 2 RRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPR 79 (254)
T ss_dssp S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTCHHHH
T ss_pred CEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCcccccccccccceee-ecccccccccccch
Confidence 6899999999999999999999999999999999999 999998876666666778888899999 88999999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEEeeccCCccc-----------cccccccccccchhHHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQK-IGMFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILSARL 610 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~-~Gv~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a~ri 610 (1005)
+++.|||++|++|.++++||+|||+.++.+.+.+ +|||+|++.+++.. ....+..+.....+.++++|
T Consensus 80 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~i 159 (254)
T PF00109_consen 80 EARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRI 159 (254)
T ss_dssp HHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHH
T ss_pred hhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccch
Confidence 9999999999999999999999999988777765 99999998884310 01111122234778899999
Q ss_pred HHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCcee
Q psy612 611 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVP 690 (1005)
Q Consensus 611 s~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~ 690 (1005)
|+.||++||+++|+++|+||+.||++|+++|++|+||+|||||++..++|..+..|.+++++++++.|+|||.+++||++
T Consensus 160 a~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~ 239 (254)
T PF00109_consen 160 AILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVL 239 (254)
T ss_dssp HHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-B
T ss_pred hhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccEEEEEcccchh
Q psy612 691 SEAVVAVVLKRLSRA 705 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A 705 (1005)
|||+|+||||++++|
T Consensus 240 gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 240 GEGAGALVLERLEHA 254 (254)
T ss_dssp B-EEEEEEEEEHHHH
T ss_pred ECceEEEEEEEhhhC
Confidence 999999999999987
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=374.53 Aligned_cols=314 Identities=26% Similarity=0.377 Sum_probs=275.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc--------cccccccccccchhHHHHHHHHHhCCCCCcc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------DRLDQVNLTSTHNAILSARLAYFMDLKGPVM 621 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~ 621 (1005)
+++++++++++||+|||++++.......++++|++.+.+.. ....+..+.+...+.++++|+..++++||++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 78999999999999999997766777789999987665421 1223444455556778999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcc
Q psy612 622 AINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 701 (1005)
Q Consensus 622 ~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~ 701 (1005)
+|+++|+|++.||++|+++|++|+||.+||+|++....+.........+++++++.|+|||...+|+++|||++++||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 99999999999999999999999999999999998887776666666778889999999999999999999999999999
Q ss_pred cchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy612 702 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 781 (1005)
Q Consensus 702 l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~ 781 (1005)
.++|.++|+++|++|.|+++.+++.......|....+.++++++|+++|++++||+|+++|++|++..|.+|.+++...+
T Consensus 171 ~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~ 250 (332)
T cd00825 171 LEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEF 250 (332)
T ss_pred HHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999987766788889999999999999999999999999999999999999999999888
Q ss_pred ccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCcc
Q psy612 782 KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLR 861 (1005)
Q Consensus 782 ~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r 861 (1005)
+.. ++++.++|.++||+.+|+|+..|++++++++++.+||++|+.++++.. ..+..+..+ .+.+
T Consensus 251 ~~~-----~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~------~~~~~~~~~-----~~~~ 314 (332)
T cd00825 251 GDK-----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG------LNIVTETTP-----RELR 314 (332)
T ss_pred CCC-----CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc------CcccCCCCC-----CCCC
Confidence 642 478999999999999999999999999999999999999999999822 223333222 2357
Q ss_pred EEEEcccCCCCceEEEEE
Q psy612 862 IGAVSAFGMSGTNAHIVL 879 (1005)
Q Consensus 862 ~a~v~sfG~gG~nah~il 879 (1005)
++++++||+||+|+|+||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 899999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=335.40 Aligned_cols=315 Identities=18% Similarity=0.147 Sum_probs=241.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+|+|++++.|-+.+.++-|..|..|.+-....+ ++ +.... ..+..+ .++-++
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~--~~------~~~~~--~~i~~~---------------~~~~~~ 57 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETR--FI------DPPGG--EWLIGA---------------PVPLPP 57 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccc--cc------cCCCC--CceEee---------------cCcCCc
Confidence 469999999999999999999999988866543211 11 10000 000000 001111
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCC-CCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCC
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGY-GPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGP 619 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~-~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gp 619 (1005)
.....++..+|+.++..+||+++|. .+ .+++++++....... .. +. ......++.++..+++ +||
T Consensus 58 ~~~~~~r~~~La~~Al~~aL~~a~~~~~-----~~i~lil~~~~~~~~-~~--~~----~~~~~~~~~~~~~lG~~~~~~ 125 (348)
T PRK06147 58 PWRGPERLAEMAAPAIAEALEGLPALDA-----SEAPLLLCVAEEERP-GR--PP----DLEERLLRELEARLGLRLEPG 125 (348)
T ss_pred ccCchHHHHHHHHHHHHHHHHhcccccc-----cCCcEEEEeCchhcC-CC--Cc----chHHHHHHHHHHHhCCCCCCC
Confidence 1122346778999999999999983 33 446788875432100 00 00 1112235667777776 689
Q ss_pred cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEE
Q psy612 620 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVL 699 (1005)
Q Consensus 620 s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvL 699 (1005)
+++|.++|+|++.||+.|++.|++|+||.+||||++.++.+.....|...+.+.. +.+++||++|||++++||
T Consensus 126 ~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------~~~~~G~v~GEGA~a~vL 198 (348)
T PRK06147 126 SAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------SQNSNGFIPGEAAAAVLL 198 (348)
T ss_pred cccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------CCCCCceeeeceEEEEEE
Confidence 9999999999999999999999999999999999999888877776766544432 137899999999999999
Q ss_pred cccchhhcCCCceEEEEEEeeeccCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH
Q psy612 700 KRLSRALSDGDPIHAIIRGSGINYDGKTNGITA-PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH 778 (1005)
Q Consensus 700 k~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~-p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~ 778 (1005)
+++++|+++|++||+ .|++.+.++.+..... +++.++.++|++||+++|++|+||+||++|||||+.+|..|..++.
T Consensus 199 e~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~ 276 (348)
T PRK06147 199 GRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEM 276 (348)
T ss_pred ccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHH
Confidence 999999999999999 6777777775332223 3789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCC
Q psy612 779 DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPA 826 (1005)
Q Consensus 779 ~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp 826 (1005)
++|+... ...++.++|+++||+.+|+|+++++.++++|++|++|+
T Consensus 277 ~~f~~~~---~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g 321 (348)
T PRK06147 277 RLFRVRK---EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG 321 (348)
T ss_pred HHhhhcc---CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9998643 22468999999999999999999999999999999986
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=280.97 Aligned_cols=177 Identities=34% Similarity=0.598 Sum_probs=149.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++||||||+||||+.++++|+++|++++++++|+. ...+..+++++.|.++.+++||++|++++.++++++.++++
T Consensus 1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 58999999999999999999999999999999982 33567888888999999999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|++|||+||... +.++.++|.++|+.++.+|+.|+++|+++ +...+++|||+|||+++++|++||++|+++
T Consensus 81 ~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~-------~~~~~l~~~i~~SSis~~~G~~gq~~YaaA 152 (181)
T PF08659_consen 81 PIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEA-------LENRPLDFFILFSSISSLLGGPGQSAYAAA 152 (181)
T ss_dssp -EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHH-------HTTTTTSEEEEEEEHHHHTT-TTBHHHHHH
T ss_pred Ccceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHH-------hhcCCCCeEEEECChhHhccCcchHhHHHH
Confidence 9999999999998 89999999999999999999999999999 555789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
|+|+|+|++++++.|. ++++|+||+|.++
T Consensus 153 N~~lda~a~~~~~~g~------~~~sI~wg~W~~~ 181 (181)
T PF08659_consen 153 NAFLDALARQRRSRGL------PAVSINWGAWDGV 181 (181)
T ss_dssp HHHHHHHHHHHHHTTS------EEEEEEE-EBSS-
T ss_pred HHHHHHHHHHHHhCCC------CEEEEEccccCCC
Confidence 9999999999999887 8999999999763
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=263.30 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=194.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|+++|||+++|||.++|+.|+++|++++...+|.+.++++..++.+ .++.++..||+|.++++++++.+.++||+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence 468999999999999999999999999777777777777887777765 678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+.+.++|++++++|+.|.++.+++++|.|. +++.|+||++||++|....+|.+.|+++|+
T Consensus 83 DiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~---~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~ 158 (246)
T COG4221 83 DILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV---ERKSGHIINLGSIAGRYPYPGGAVYGATKA 158 (246)
T ss_pred cEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHH---hcCCceEEEeccccccccCCCCccchhhHH
Confidence 99999999998 68999999999999999999999999999999964 456779999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHh--cCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
|+.+|++.+|++.. +.++++.+|.+|...++-+..-........... .+..++++++.++.+..++.+|..
T Consensus 159 aV~~fs~~LR~e~~--g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 159 AVRAFSLGLRQELA--GTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred HHHHHHHHHHHHhc--CCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 99999999999965 778899999999996654433222212222333 577789999999999999988754
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=266.27 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC-CCCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~Gps~~v~taCs 628 (1005)
++.++.+++.+||+++|++++++. ++++|+..+++. ....+.+|++.+|+ ++|+++|+++|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~-------------~~~~a~~i~~~lg~~~~~~~~i~~~C~ 69 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE-------------FSGAAGQLAYHLGISGGPAYSVNQACA 69 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc-------------ccHHHHHHHHHhCCCCCCcceeccHhH
Confidence 678999999999999999876654 899998765431 24567899999999 999999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||++|++.|++|++|.+||+|++. +++|||++++||++.+++.++
T Consensus 70 s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~~~a~~~ 118 (254)
T cd00327 70 TGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESEEHALRR 118 (254)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcHHHHHHC
Confidence 9999999999999999999999999997 789999999999999999999
Q ss_pred CCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCC
Q psy612 709 GDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ 788 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~ 788 (1005)
++++++.|.++...+++.... ..+......++++++|+++|++++||+|++.|+++++..|.+|.+.....++..
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~---- 193 (254)
T cd00327 119 GAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVR---- 193 (254)
T ss_pred CCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCC----
Confidence 999999999999888875433 467788999999999999999999999999999999999999988877665432
Q ss_pred CceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEccc
Q psy612 789 KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 868 (1005)
Q Consensus 789 ~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sf 868 (1005)
.+++.+.|..+||+.+|+|+..+++++.+++++.+||. ..+.+..++++|
T Consensus 194 -~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~~ 243 (254)
T cd00327 194 -SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-----------------------------PREPRTVLLLGF 243 (254)
T ss_pred -CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-----------------------------CCCcCEEEEeeE
Confidence 26789999999999999999999999999999999981 012356789999
Q ss_pred CCCCceEEEEE
Q psy612 869 GMSGTNAHIVL 879 (1005)
Q Consensus 869 G~gG~nah~il 879 (1005)
|+||+++++||
T Consensus 244 g~Gg~~~~~~l 254 (254)
T cd00327 244 GLGGTNAAVVL 254 (254)
T ss_pred cCCCcceEEEC
Confidence 99999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=325.46 Aligned_cols=287 Identities=20% Similarity=0.297 Sum_probs=224.7
Q ss_pred CCCceEEEEecCCCCCcChHHHHHHHHHHhcCCC-c-eEEEEecCc---eeEEEeeeeecccc--ccCCccccCCCEEEE
Q psy612 1 MPETQISIVFAEKITNFNIKNWINILFKELQEPK-L-FSIMYYGND---LIRYQLNIKSIILK--DFKNSYIKQGGTYLI 73 (1005)
Q Consensus 1 lp~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~~~-~-~~v~~r~g~---~~r~~~~l~~~~~~--~~~~~~~~~~~~~lI 73 (1005)
+|++.||+||+++... ..+++..++.|+.+.+ . .+|.||++. ..|++....+...+ ......+.++++|||
T Consensus 1925 ~P~~~~r~vDl~~~~~--~~~~a~~l~~El~~~~~~~~eVg~~~~~~~~g~R~~~~~~~~~~~~~~~~~~~l~~g~vvLV 2002 (2582)
T TIGR02813 1925 WNAVFCRALDLAPKLD--ADKAATAVNDELLDIDGSIVEVGHDTDNLSNGSRLTLSAVVTDTAIAKGSNAALNSDDVFLV 2002 (2582)
T ss_pred CCCCeEEEEeCCCCcC--hHHHHHHHHHHHhccCCCceEEEeccccccccceeEEeccCCCCccccccccccCCCCEEEE
Confidence 5899999999987544 5678899999998743 3 699999731 15665433322111 123346889999999
Q ss_pred ECChhHHHHHHHHHHHHcCCcEEEEecCCCc---------------------------------------------h---
Q psy612 74 TGGTGRLGMLFSDYLINKYSTNLILSGRSKL---------------------------------------------N--- 105 (1005)
Q Consensus 74 TGg~gGIG~aiA~~La~~Ga~~vil~~r~~~---------------------------------------------~--- 105 (1005)
|||++|||+++|++|+++|..+|++++|+.. .
T Consensus 2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813 2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence 9999999999999999997567777887721 0
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHH
Q psy612 106 SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 185 (1005)
Q Consensus 106 ~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~ 185 (1005)
.+..+.+++.|.++.|+.|||+|.++++++++.+.++ ++||+||||||+.. ++.+.+++.++|++++++|+.|+++|+
T Consensus 2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv~G~~~Ll 2160 (2582)
T TIGR02813 2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKVDGLLSLL 2160 (2582)
T ss_pred HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 0123344556889999999999999999999999876 78999999999988 889999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc
Q psy612 186 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN 265 (1005)
Q Consensus 186 ~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~ 265 (1005)
+++.+. ..++||+|||+++++|++||++|+++|++|+.|++.++.+.. ++++++|+||+|. +||...
T Consensus 2161 ~al~~~-------~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~----~irV~sI~wG~wd-tgm~~~- 2227 (2582)
T TIGR02813 2161 AALNAE-------NIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP----SAKVMSFNWGPWD-GGMVNP- 2227 (2582)
T ss_pred HHHHHh-------CCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC----CcEEEEEECCeec-CCccch-
Confidence 986543 356899999999999999999999999999999999887742 3699999999995 577532
Q ss_pred chhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhhch
Q psy612 266 NEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSG 306 (1005)
Q Consensus 266 ~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~~~ 306 (1005)
.....+...|+..++.+.+...|...|..+....+++.+
T Consensus 2228 --~l~~~~~~rg~~~ipl~ag~~~f~~eL~s~~g~~v~Vg~ 2266 (2582)
T TIGR02813 2228 --ALKKMFNDRGVYVIPLDAGAELFVSQLLSDTGAQLLVGT 2266 (2582)
T ss_pred --hHHHHHHhcccccCCCchhHHHhHHHhcCCCCCEEEECC
Confidence 122345567888888899999987667665433333333
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=288.44 Aligned_cols=295 Identities=21% Similarity=0.326 Sum_probs=242.8
Q ss_pred CCccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch----HHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy612 61 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 61 ~~~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~----~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
++..+.+.|+|+|+||.||.|+++|.||..+|++.+++++|+... ...+...++.|++|.+-..||+..+..+.++
T Consensus 1761 ~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li 1840 (2376)
T KOG1202|consen 1761 PRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLI 1840 (2376)
T ss_pred chhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHH
Confidence 355677999999999999999999999999999999999998643 3455667788999999999999999999999
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
++. .+.|++.||||.|.+.+ |+.+++.+++.|+.+-++|+.|+.+|++....++ ..+++||.|||++.-.|+.
T Consensus 1841 ~~s-~kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C-----~~LdyFv~FSSvscGRGN~ 1913 (2376)
T KOG1202|consen 1841 EES-NKLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREIC-----PELDYFVVFSSVSCGRGNA 1913 (2376)
T ss_pred HHh-hhcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhC-----cccceEEEEEeecccCCCC
Confidence 887 56799999999999999 9999999999999999999999999999965542 2589999999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
||++|+-+|++++.+++.|+..|. |.++|.||.+.++|....+-...+... .|-.+......++.++-.|.+
T Consensus 1914 GQtNYG~aNS~MERiceqRr~~Gf------PG~AiQWGAIGDvGlilEnmgdNdTvv--gGTLPQRM~SCLetlDlFL~q 1985 (2376)
T KOG1202|consen 1914 GQTNYGLANSAMERICEQRRHEGF------PGTAIQWGAIGDVGLILENMGDNDTVV--GGTLPQRMPSCLETLDLFLQQ 1985 (2376)
T ss_pred cccccchhhHHHHHHHHHhhhcCC------CcceeeeecccceeeeeeecCCCCcee--ccccchhHHHHHHHHHHHhcC
Confidence 999999999999999999999998 889999999999997654433322211 344555666788888888887
Q ss_pred cchhhhhhchhhHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHhCC-CCcccccCCchhhcCCchHHHHHH
Q psy612 297 DKIQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNILNT-KKSEIYKNKNLADYGFDSISLAEF 375 (1005)
Q Consensus 297 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~L~~-~~~~i~~~~~l~elG~DSL~a~el 375 (1005)
+.+-+..+... . ..+.+. .-...|.+.|+.+||+ +...++.+.+|+|||+||||.+|+
T Consensus 1986 pHpvvsS~v~A--E--------------k~~~d~-----~~~~dLiatiA~IlGlrD~~~vn~~asLaDLGlDSLMsvEi 2044 (2376)
T KOG1202|consen 1986 PHPVVSSFVVA--E--------------KRKADQ-----DSGRDLIATIAHILGLRDLKAVNDDASLADLGLDSLMSVEI 2044 (2376)
T ss_pred CchHHHHHHHH--H--------------hhcccc-----cccccHHHHHHHHhcchhHhhccCCCchhhccchhhhhHHH
Confidence 76532211110 0 000011 1123477889999999 778899999999999999999999
Q ss_pred HHHHHhhcCcccCccc
Q psy612 376 SRILSKFYSLDIMPSI 391 (1005)
Q Consensus 376 ~~~l~~~~g~~l~~~~ 391 (1005)
+..|+++|++-|+.-+
T Consensus 2045 kQtLER~~dlVLS~qE 2060 (2376)
T KOG1202|consen 2045 KQTLEREFDLVLSAQE 2060 (2376)
T ss_pred HHHHhhhhceeeeHHH
Confidence 9999999999887654
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=247.56 Aligned_cols=225 Identities=16% Similarity=0.181 Sum_probs=193.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
-+++++|||||++|||+++|.+|+++|++.++..-......++.+++++.| +++++.||+++.+++.++.+++++++|+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999999999977777777777888999998876 8999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ...+.+.+.+++++.+++|+.|.++..++++|.|. +.+.|+||+++|++|.+|.+|..+|+++|
T Consensus 115 V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~---~~~~GHIV~IaS~aG~~g~~gl~~YcaSK 190 (300)
T KOG1201|consen 115 VDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKML---ENNNGHIVTIASVAGLFGPAGLADYCASK 190 (300)
T ss_pred ceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHH---hcCCceEEEehhhhcccCCccchhhhhhH
Confidence 999999999998 88899999999999999999999999999999964 45679999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCC-ceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhh
Q psy612 226 RFQTVYAKYLNNKNIYKKYT-NKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 302 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~-~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~ 302 (1005)
+++.+|.+.+..+....+.. ++++.+.+.... +||-.. .... ..-+..+++++.++.+.+.+..+.....
T Consensus 191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tgmf~~-~~~~-----~~l~P~L~p~~va~~Iv~ai~~n~~~~~ 261 (300)
T KOG1201|consen 191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TGMFDG-ATPF-----PTLAPLLEPEYVAKRIVEAILTNQAGLL 261 (300)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-ccccCC-CCCC-----ccccCCCCHHHHHHHHHHHHHcCCcccc
Confidence 99999988887665544444 788888777665 888654 1111 1234678999999999988887765544
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=232.67 Aligned_cols=229 Identities=15% Similarity=0.178 Sum_probs=185.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
..++++||||++|||+++++.|+++|+++++...++...++....|...+ ....+.|||+++++++.++++..+.+|++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999888887777777665543 45678999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
++||||||+.. |..+..+..++|++++.+|+.|++++++++.+.|. +..+.+.+||++||+.+..|+.||++|+|+|+
T Consensus 92 svlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~-~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~ 169 (256)
T KOG1200|consen 92 SVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMV-MNQQQGLSIINVSSIVGKIGNFGQTNYAASKG 169 (256)
T ss_pred cEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHH-HhcCCCceEEeehhhhcccccccchhhhhhcC
Confidence 99999999999 99999999999999999999999999999988864 33455669999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
++.+|++..++++. ..++++.++.+|.+. +-|....... .+.+.....+..+...|-++-+...|.++...+
T Consensus 170 GvIgftktaArEla--~knIrvN~VlPGFI~-tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssY 242 (256)
T KOG1200|consen 170 GVIGFTKTAARELA--RKNIRVNVVLPGFIA-TPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSY 242 (256)
T ss_pred ceeeeeHHHHHHHh--hcCceEeEecccccc-ChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhcccccc
Confidence 99999999888876 445677788777775 4565443332 333444444444544444444444555555444
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=245.78 Aligned_cols=230 Identities=18% Similarity=0.179 Sum_probs=197.1
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
..++++||||+|+|||.++|+.|+++|.+.+++.+|.+.+.++.++|+.. +.++.++++|+++++++.++.+++.++.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999999999999999999999987777766778888899998864 68999999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||++|||||... .+++.+.+.++.++++++|+.++..|+++++|.|. ++..|.||+++|++|+.+.|..+.|+|+
T Consensus 84 ~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~---~~~~G~IiNI~S~ag~~p~p~~avY~AT 159 (265)
T COG0300 84 PIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMV---ERGAGHIINIGSAAGLIPTPYMAVYSAT 159 (265)
T ss_pred cccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCceEEEEechhhcCCCcchHHHHHH
Confidence 9999999999998 88999999999999999999999999999999964 4567899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVL 304 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~ 304 (1005)
|+|+.+|++.++.+. ++.++++.++++|+....... . ..........+...+++++..+.....+..+....++.
T Consensus 160 Ka~v~~fSeaL~~EL--~~~gV~V~~v~PG~~~T~f~~-~--~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k~~ii~~ 234 (265)
T COG0300 160 KAFVLSFSEALREEL--KGTGVKVTAVCPGPTRTEFFD-A--KGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIPG 234 (265)
T ss_pred HHHHHHHHHHHHHHh--cCCCeEEEEEecCcccccccc-c--cccccccccchhhccCHHHHHHHHHHHHhcCCceEecC
Confidence 999999999999986 477789999999887654332 1 11111122235668999999999999998876654433
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=248.00 Aligned_cols=189 Identities=19% Similarity=0.209 Sum_probs=168.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-C-cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-N-KAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~-~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++||||+|+|||.++|..|+++|++.+++.+|...++...+++++.+ . ++++++|||+|.+++.++++++.++||
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999998888888888888878887653 3 499999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|++|||||+.. .....+.+.++++.+|++|+.|+..++++++|+|++ ++.|+||++||++|..+.|..+.|+|+
T Consensus 91 ~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~---r~~GhIVvisSiaG~~~~P~~~~Y~AS 166 (282)
T KOG1205|consen 91 RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKK---RNDGHIVVISSIAGKMPLPFRSIYSAS 166 (282)
T ss_pred CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhh---cCCCeEEEEeccccccCCCcccccchH
Confidence 9999999999998 788889999999999999999999999999999764 336999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
|++|.+|.+.+|.+....+..+.+ +|.+|+.. +.|
T Consensus 167 K~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~-Te~ 201 (282)
T KOG1205|consen 167 KHALEGFFETLRQELIPLGTIIII-LVSPGPIE-TEF 201 (282)
T ss_pred HHHHHHHHHHHHHHhhccCceEEE-EEecCcee-ecc
Confidence 999999999999997633333444 78877774 444
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-28 Score=232.42 Aligned_cols=118 Identities=43% Similarity=0.688 Sum_probs=101.1
Q ss_pred EEEEEEeeeccCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCce
Q psy612 713 HAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFC 791 (1005)
Q Consensus 713 ~avI~g~~~~~dG-~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~ 791 (1005)
||+|+|+++++|| ++.+++.|++.+++++|++||+++|++|+||+|||+|||||+.+|++|+++|.++|+.... .++|
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~-~~~~ 79 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSAR-QQPV 79 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGG-TSTS
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccccc-cccc
Confidence 7999999999999 8888999999999999999999999999999999999999999999999999999997653 4569
Q ss_pred eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCC
Q psy612 792 AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831 (1005)
Q Consensus 792 ~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 831 (1005)
+|+|+|+++||+++|||+++|+|++++|++++|||++||+
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 9999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=236.89 Aligned_cols=223 Identities=12% Similarity=0.078 Sum_probs=178.9
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC---------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~---------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
-++|++|||||++|||+++|+.|+++|++++++..+. +..++..++++..+.++.++.+|++|++++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3689999999999999999999999999877665443 3345566677767778899999999999999999
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc---CCCcEEEEecCccccc
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~---~~~~~iV~~SSia~~~ 213 (1005)
+++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++... ...++||++||+++..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 999999999999999999987 678889999999999999999999999999999864221 1137999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHh--cC-CCCCCHHHHHHHH
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SK-QKVLHENDGLKLF 290 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g-~~~l~~~~~~~~l 290 (1005)
+.++++.|+++|+++++|++.++.+.. ..++++.+|.+| . .+.|.... ....... .+ +...++++....+
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v~Pg-~-~T~~~~~~---~~~~~~~~~~~~~~~~~pedva~~~ 235 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELG--RYGVTVNAIAPA-A-RTRMTETV---FAEMMAKPEEGEFDAMAPENVSPLV 235 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHH--HhCeEEEEECCC-C-CCCcchhh---HHHHHhcCcccccCCCCHHHHHHHH
Confidence 999999999999999999999888743 345688899887 3 44553211 1111111 11 2346899998888
Q ss_pred HHHHhc
Q psy612 291 EQLLIQ 296 (1005)
Q Consensus 291 ~~~l~~ 296 (1005)
..++..
T Consensus 236 ~~L~s~ 241 (286)
T PRK07791 236 VWLGSA 241 (286)
T ss_pred HHHhCc
Confidence 887653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=236.38 Aligned_cols=228 Identities=11% Similarity=0.074 Sum_probs=183.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||++|||+++|++|+++|++++++.++.+..++..+++++.+.++.++.+|++|+++++++++++.+.+|+|
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999975554444445566777787778889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...+.||++||+.+..+.++++.|+++|+
T Consensus 86 D~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~---~~~g~iV~isS~~~~~~~p~~~~Y~asKa 161 (330)
T PRK06139 86 DVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKK---QGHGIFINMISLGGFAAQPYAAAYSASKF 161 (330)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH---cCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence 99999999987 778899999999999999999999999999999753 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
++.+|++.++.+.. ...++++.+|.+|..... |............ ......+++++.++.+..++..+...+
T Consensus 162 al~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~-~~~~~~~~~~~~~-~~~~~~~~pe~vA~~il~~~~~~~~~~ 233 (330)
T PRK06139 162 GLRGFSEALRGELA-DHPDIHVCDVYPAFMDTP-GFRHGANYTGRRL-TPPPPVYDPRRVAKAVVRLADRPRATT 233 (330)
T ss_pred HHHHHHHHHHHHhC-CCCCeEEEEEecCCccCc-ccccccccccccc-cCCCCCCCHHHHHHHHHHHHhCCCCEE
Confidence 99999999988843 223678888987766443 3211111000000 112235789999999999887765533
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=231.34 Aligned_cols=227 Identities=14% Similarity=0.117 Sum_probs=181.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|++|+++|+++++..++.+..++..++++..+.++.++.||++|++++.++++++.+.+|++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999976655544445566667777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|.+ ....++||++||+++..+.++++.|+++|+
T Consensus 85 d~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~--~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 161 (275)
T PRK05876 85 DVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLE--QGTGGHVVFTASFAGLVPNAGLGAYGVAKY 161 (275)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence 99999999976 678889999999999999999999999999999743 223579999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH---------HHH--hcCCCCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF---------YFK--SSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~---------~~~--~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|.. +++|.......... ... ......+++++..+.+...+.
T Consensus 162 a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~ 238 (275)
T PRK05876 162 GVVGLAETLAREVT--ADGIGVSVLCPMVV-ETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL 238 (275)
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEEeCcc-ccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 99999999887743 34568888876654 45553221100000 000 001125789999999999887
Q ss_pred ccch
Q psy612 296 QDKI 299 (1005)
Q Consensus 296 ~~~~ 299 (1005)
.+..
T Consensus 239 ~~~~ 242 (275)
T PRK05876 239 ANRL 242 (275)
T ss_pred cCCe
Confidence 7653
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-24 Score=217.76 Aligned_cols=163 Identities=23% Similarity=0.291 Sum_probs=152.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC---CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~---~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
|++|||||++|||++++++|+++|+.++++++|+ +..+++.++++..+.++.+++||++++++++++++++.+++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999999999999998 4455667778888899999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+++.++|++++++|+.+++++.+++.| ++.++||++||+++..|.+++..|+++|
T Consensus 81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-------~~~g~iv~~sS~~~~~~~~~~~~Y~ask 152 (167)
T PF00106_consen 81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP-------QGGGKIVNISSIAGVRGSPGMSAYSASK 152 (167)
T ss_dssp ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-------HTTEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee-------ccccceEEecchhhccCCCCChhHHHHH
Confidence 999999999998 89999999999999999999999999999887 2478999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKN 239 (1005)
Q Consensus 226 a~l~~la~~~~~~g 239 (1005)
+++++|++.+++++
T Consensus 153 aal~~~~~~la~e~ 166 (167)
T PF00106_consen 153 AALRGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=225.75 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=177.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++ +|+. .++..++++..+.++.++.+|++|+++++++++++.+.+|++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~-~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGV-GVAE-APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEe-cCch-HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999976554 5543 244555666667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ....++||++||+++..+.++...|+++|+
T Consensus 85 D~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~~~~g~ii~isS~~~~~~~~~~~~Y~asK~ 161 (251)
T PRK12481 85 DILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVK--QGNGGKIINIASMLSFQGGIRVPSYTASKS 161 (251)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHH--cCCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence 99999999876 677889999999999999999999999999999753 223579999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|..... ............ +..+++|....+..++..
T Consensus 162 a~~~l~~~la~e~~--~~girvn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 162 AVMGLTRALATELS--QYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEecCCCc-cCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999988754 445688899888774 44432111 111111222222 345788888888887653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=229.46 Aligned_cols=224 Identities=14% Similarity=0.166 Sum_probs=175.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||++|||+++|++|+++|+++ ++++|+ +..+++.+++.. +.++.+++||++|.++++++++++.+.+|+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V-~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKL-ALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999865 444554 333444444432 456778889999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|+|.+ ..++||++||+++..+.+++..|+++|
T Consensus 86 id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (296)
T PRK05872 86 IDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE----RRGYVLQVSSLAAFAAAPGMAAYCASK 160 (296)
T ss_pred CCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH----cCCEEEEEeCHhhcCCCCCchHHHHHH
Confidence 999999999987 788899999999999999999999999999998743 247999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh---hhHHHHhc---CCCCCCHHHHHHHHHHHHhccch
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSS---KQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~---g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++++|++.++.+.. ..++++.+|.+| |.++.|....... ........ ....+++++..+.+..++..+..
T Consensus 161 aal~~~~~~l~~e~~--~~gi~v~~v~Pg-~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~ 237 (296)
T PRK05872 161 AGVEAFANALRLEVA--HHGVTVGSAYLS-WIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRAR 237 (296)
T ss_pred HHHHHHHHHHHHHHH--HHCcEEEEEecC-cccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCC
Confidence 999999999887643 234566677554 4456664322111 11111111 12457899999999998876554
Q ss_pred h
Q psy612 300 Q 300 (1005)
Q Consensus 300 ~ 300 (1005)
.
T Consensus 238 ~ 238 (296)
T PRK05872 238 R 238 (296)
T ss_pred E
Confidence 3
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-23 Score=224.14 Aligned_cols=184 Identities=14% Similarity=0.076 Sum_probs=157.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++. +.++.++.+|++|+++++++++++. ++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCC
Confidence 5799999999999999999999999997555444334445555566543 5678999999999999999999985 6899
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++ ...++||++||+++..+.++...|+++|
T Consensus 86 iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~---~~~g~Ii~isS~~~~~~~~~~~~y~asK 161 (263)
T PRK08339 86 PDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER---KGFGRIIYSTSVAIKEPIPNIALSNVVR 161 (263)
T ss_pred CcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEEcCccccCCCCcchhhHHHH
Confidence 999999999876 677889999999999999999999999999999753 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+++.+|++.++.+.. ..++++.+|.+|...
T Consensus 162 aal~~l~~~la~el~--~~gIrVn~v~PG~v~ 191 (263)
T PRK08339 162 ISMAGLVRTLAKELG--PKGITVNGIMPGIIR 191 (263)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEeCcCc
Confidence 999999999988854 456788899988774
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-23 Score=231.03 Aligned_cols=227 Identities=11% Similarity=0.043 Sum_probs=182.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||++|||++++++|+++|++++++.++.+..++..+++++.|.++.++++|++|+++++++++.+.+++|+|
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 47899999999999999999999999876555544445566677777778899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+.+.++|++++++|+.|.+++.+.++++|++ .+.++||++||+.+..+.++++.|+++|+
T Consensus 87 D~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~---~~~g~iV~isS~~~~~~~~~~~~Y~asK~ 162 (334)
T PRK07109 87 DTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP---RDRGAIIQVGSALAYRSIPLQSAYCAAKH 162 (334)
T ss_pred CEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence 99999999876 678889999999999999999999999999999643 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
++.+|++.++.+....+.++++++|.+|.... .|.......... .........++++..+.+..++..+..
T Consensus 163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T-~~~~~~~~~~~~-~~~~~~~~~~pe~vA~~i~~~~~~~~~ 233 (334)
T PRK07109 163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNT-PQFDWARSRLPV-EPQPVPPIYQPEVVADAILYAAEHPRR 233 (334)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccC-chhhhhhhhccc-cccCCCCCCCHHHHHHHHHHHHhCCCc
Confidence 99999999887754444567888998876643 221110000000 001112346899999999998876643
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=223.39 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=169.6
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||++ |||+++|+.|+++|+++++. .|+....+..+++. +.+. ..+++||++|+++++++++++.+++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~-~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFT-YQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEe-cCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 579999999997 99999999999999976554 55543333334443 3343 3578999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|+ + .+.||++||+++..+.+++..
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~--~G~Iv~isS~~~~~~~~~~~~ 158 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---D--GGSMLTLTYGGSTRVMPNYNV 158 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---c--CceEEEEcCCCccccCCccch
Confidence 999999999998641 14678899999999999999999999999999974 2 378999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh--h-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--T-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|....... . ....+...+ +..+|+|....+..++..
T Consensus 159 Y~asKaAl~~l~r~la~el~--~~gIrVn~v~PG~i~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~ 235 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYG--PQGIRVNAISAGPVRT-LAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSD 235 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHh--hcCeEEEEEecCCccc-cccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCc
Confidence 99999999999999988854 4567888999887753 443211110 0 111111122 245889999888887653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=221.70 Aligned_cols=222 Identities=17% Similarity=0.129 Sum_probs=176.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++. |++..++..+++++.+.++.++.||+++++++.++++++.+.+|+|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVD-IAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe-CcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 578999999999999999999999998765554 4465666777777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+......+.+.+.+.|++++++|+.|++.+.++++|+|++ . .++||++||.++..+.++.+.|+++|+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~-~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME---Q-GGSIINTSSFSGQAADLYRSGYNAAKG 159 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---c-CCEEEEeCchhhcCCCCCCchHHHHHH
Confidence 999999998642456788899999999999999999999999999753 2 378999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----hhhHHHH-----hcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFK-----SSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~-----~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++..|++.++.+.. ..++++.+|.+|... +.|...... .....+. ...+ +..++++..+.+..++..
T Consensus 160 al~~l~~~la~e~~--~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 236 (272)
T PRK08589 160 AVINFTKSIAIEYG--RDGIRANAIAPGTIE-TPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASD 236 (272)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCccc-CchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999988753 345788999988764 444321100 0000011 0111 234788888888777653
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=226.18 Aligned_cols=223 Identities=15% Similarity=0.132 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|++|+++|+++++...+. +..++..++++..+.++.++.+|++|++++.++++.+.+ +|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 679999999999999999999999999766655433 334566677777788899999999999999999999988 999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc----CCCcEEEEecCcccccCCCCChhh
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK----NKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~----~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
||+||||||+.. ...+.+++.++|++++++|+.|++++++++.++|++... ...++||++||.++..+.+++..|
T Consensus 90 iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 168 (306)
T PRK07792 90 LDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANY 168 (306)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchH
Confidence 999999999987 677889999999999999999999999999999864221 123789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++++|++.++.+.. ..++++.+|.++. .+.|.......... .......++++++....+..++..
T Consensus 169 ~asKaal~~l~~~la~e~~--~~gI~vn~i~Pg~--~t~~~~~~~~~~~~-~~~~~~~~~~pe~va~~v~~L~s~ 238 (306)
T PRK07792 169 GAAKAGITALTLSAARALG--RYGVRANAICPRA--RTAMTADVFGDAPD-VEAGGIDPLSPEHVVPLVQFLASP 238 (306)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCeEEEEECCCC--CCchhhhhccccch-hhhhccCCCCHHHHHHHHHHHcCc
Confidence 9999999999999887743 3456888887763 44453221111010 111234567899988887776653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=220.17 Aligned_cols=224 Identities=11% Similarity=0.072 Sum_probs=175.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||++++++|+++|++++++.++.+..+++.++++..+.++.++.||++++++++++++++.+++|+|
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999975555444444556667777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaan 225 (1005)
|+||||||+.....++.+.+.++|++++++|+.+++++.++++|.|++ .+.+.||++||+++. .+.+++..|+++|
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA---RGGGSLIFTSTFVGHTAGFPGMAAYAASK 161 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCceEEEEechHhhccCCCCcchhHHHH
Confidence 999999998642467888999999999999999999999999998653 346789999999887 5788999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHh-cCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKS-SKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~-~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.+. +.|..... .......+. ..+ ...++++..+.+..++..
T Consensus 162 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 233 (254)
T PRK07478 162 AGLIGLTQVLAAEYG--AQGIRVNALLPGGTD-TPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASD 233 (254)
T ss_pred HHHHHHHHHHHHHHh--hcCEEEEEEeeCccc-CcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999888743 345688888887764 45543211 111111111 111 245788888888876653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=219.82 Aligned_cols=224 Identities=13% Similarity=0.131 Sum_probs=175.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++++.|+++|++++++.++.+..++..++++..+.++..+.+|++|++++.++++++.+.+|++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999865554443344556666777667788899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C-CChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F-GSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~-g~~~Yaaa 224 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|.|.+ +...+.||++||+++..+. + +...|+++
T Consensus 88 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as 164 (253)
T PRK05867 88 DIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVK--QGQGGVIINTASMSGHIINVPQQVSHYCAS 164 (253)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHh--cCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence 99999999876 677888999999999999999999999999999743 2335789999999887543 3 45789999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|............+...+ +..+|+|..+.+..++..
T Consensus 165 Kaal~~~~~~la~e~~--~~gI~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~ 234 (253)
T PRK05867 165 KAAVIHLTKAMAVELA--PHKIRVNSVSPGYIL-TELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASE 234 (253)
T ss_pred HHHHHHHHHHHHHHHh--HhCeEEEEeecCCCC-CcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999987754 345688899887764 44432211111111122222 346889999988887754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=220.44 Aligned_cols=223 Identities=11% Similarity=0.101 Sum_probs=175.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||++++++|+++|++++++.++.+..++..++++. .+.++.+++||++|++++.++++++.+.+|
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999765554444445566666665 466788999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ...+.+.+.++|++++++|+.+++++.++++|.|++ .+.++||++||.++..+.++...|+++
T Consensus 86 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~s 161 (260)
T PRK07063 86 PLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVE---RGRGSIVNIASTHAFKIIPGCFPYPVA 161 (260)
T ss_pred CCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh---hCCeEEEEECChhhccCCCCchHHHHH
Confidence 9999999999876 566778899999999999999999999999999753 345799999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----c-h-hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----N-E-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~-~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.. ++.|.... . . ......+...+ +..++++....+..++..
T Consensus 162 Kaa~~~~~~~la~el~--~~gIrvn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~ 238 (260)
T PRK07063 162 KHGLLGLTRALGIEYA--ARNVRVNAIAPGYI-ETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASD 238 (260)
T ss_pred HHHHHHHHHHHHHHhC--ccCeEEEEEeeCCc-cChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999999988754 34578889988765 44443210 0 0 01111111122 234778888887776643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=218.60 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=174.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+|++|||||++|||++++++|+++|+++ ++..|+ ...++..++++..+.++.++++|++|+++++++++++.+.+|++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~V-i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANV-VITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 5799999999999999999999999954 444554 34455555666666788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++++.++++++|.+ ....++||++||+.+..+.+++..|+++|+
T Consensus 80 d~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~g~ii~isS~~~~~~~~~~~~Y~~sKa 156 (252)
T PRK07677 80 DALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIE--KGIKGNIINMVATYAWDAGPGVIHSAAAKA 156 (252)
T ss_pred cEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--cCCCEEEEEEcChhhccCCCCCcchHHHHH
Confidence 99999999765 567889999999999999999999999999998743 233589999999999988899999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.|++.++.+.. ...++++.+|.+|.+.+++|... .+...+...+...+ ...++++..+.+..++.
T Consensus 157 a~~~~~~~la~e~~-~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 228 (252)
T PRK07677 157 GVLAMTRTLAVEWG-RKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLS 228 (252)
T ss_pred HHHHHHHHHHHHhC-cccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999888742 23467899999998876554321 11111111222222 23467777777766654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=220.55 Aligned_cols=223 Identities=11% Similarity=-0.024 Sum_probs=170.9
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++||||| ++|||+++|+.|+++|+++++ ..|.+...+..+++.+.......++||++|+++++++++++.+++|
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAF-TYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE-EcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999997 679999999999999996555 4555444455555554433456789999999999999999999999
Q ss_pred CccEEEEcCcccCcc----chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 145 PIDGVLHIAGISGLT----SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~----~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+||++|||||+.... ..+.+.+.++|++++++|+.+++++.+++.|+|++ . .+.||++||+++..+.+++..
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~---~-~g~Iv~iss~~~~~~~~~~~~ 159 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG---R-NSAIVALSYLGAVRAIPNYNV 159 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh---c-CcEEEEEcccccccCCCCccc
Confidence 999999999986521 12467888999999999999999999999998642 2 378999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... .......+...+ +..+++|..+.+..++..
T Consensus 160 Y~asKaal~~l~~~la~e~~--~~gIrVn~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~ 236 (261)
T PRK08690 160 MGMAKASLEAGIRFTAACLG--KEGIRCNGISAGPIK-TLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSD 236 (261)
T ss_pred chhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCccc-chhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999887754 445689999988774 44532211 111111222222 345788998888887764
Q ss_pred c
Q psy612 297 D 297 (1005)
Q Consensus 297 ~ 297 (1005)
.
T Consensus 237 ~ 237 (261)
T PRK08690 237 L 237 (261)
T ss_pred c
Confidence 3
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=217.79 Aligned_cols=223 Identities=15% Similarity=0.164 Sum_probs=175.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|++|+++|++++++.++.+ ..++..++++..+.++.++.+|++|+++++++++++.+.+|+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999987666655443 345666777777778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC--ChhhhH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--SCDYAM 223 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g--~~~Yaa 223 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||+++..+.++ ++.|++
T Consensus 87 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~~~Y~~ 162 (254)
T PRK06114 87 LTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLE---NGGGSIVNIASMSGIIVNRGLLQAHYNA 162 (254)
T ss_pred CCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh---cCCcEEEEECchhhcCCCCCCCcchHHH
Confidence 999999999877 677889999999999999999999999999998643 34679999999999887765 789999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+|+++..|++.++.+.. ..++++.+|.+|.. ++.|..... .......+...+ +..+++|....+..++..
T Consensus 163 sKaa~~~l~~~la~e~~--~~gi~v~~v~PG~i-~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~ 235 (254)
T PRK06114 163 SKAGVIHLSKSLAMEWV--GRGIRVNSISPGYT-ATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSD 235 (254)
T ss_pred HHHHHHHHHHHHHHHHh--hcCeEEEEEeecCc-cCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999987643 34568888877654 455532211 111111111112 345688888888877653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=219.86 Aligned_cols=219 Identities=11% Similarity=0.040 Sum_probs=171.5
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+ +|||+++|+.|+++|+++++ ..|++...+..+++. +.++.+++||++|+++++++++++.+++|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~-~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIY-TYQNDRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEE-ecCchHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 57999999999 89999999999999987554 456543333333332 34678899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|++|||||+..+ ..++.+.+.++|++++++|+.|++.+.++++|+|+ + .+.||++||+++..+.++++.|
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~---~--~g~Iv~iss~~~~~~~~~~~~Y 157 (252)
T PRK06079 83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN---P--GASIVTLTYFGSERAIPNYNVM 157 (252)
T ss_pred CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc---c--CceEEEEeccCccccCCcchhh
Confidence 99999999998642 25678899999999999999999999999999863 2 3789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|..... ...+...+... -+..+|+|..+.+..++..
T Consensus 158 ~asKaal~~l~~~la~el~--~~gI~vn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 158 GIAKAALESSVRYLARDLG--KKGIRVNAISAGAVKT-LAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSD 233 (252)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEecCcccc-cccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence 9999999999999998754 4456889999888854 4432111 11111112111 2356889998888887754
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=219.18 Aligned_cols=221 Identities=11% Similarity=0.042 Sum_probs=171.9
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCC--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~--~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+|++|||||+ +|||+++|+.|+++|+++++...+.+ ..++..+++.+.+.++.++++|++|+++++++++++.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 57999999986 89999999999999998666543322 234455566555556788999999999999999999999
Q ss_pred cCCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 143 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|++|++|||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .++||++||+++..+.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~~~~~~~ 159 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-----GGSIVTLTYLGGVRAIPNYN 159 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-----CCeEEEEeccccccCCcccc
Confidence 9999999999998641 256888999999999999999999999999999742 37899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|++|.+.. .|.... ............+ +..+++|....+..++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~--~~gI~Vn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s 236 (258)
T PRK07370 160 VMGVAKAALEASVRYLAAELG--PKNIRVNAISAGPIRT-LASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLS 236 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHhC--cCCeEEEEEecCcccC-chhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhC
Confidence 999999999999999998854 4567899999887754 332111 0111111111122 34567888888777665
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-22 Score=221.07 Aligned_cols=220 Identities=14% Similarity=0.031 Sum_probs=169.1
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||+ +|||+++|+.|+++|++++ +..|+....+..+++. +.+.. .+++||++|+++++++++++.+++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vi-l~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELA-FTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEE-EEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence 47999999997 8999999999999999655 4556543333344443 33444 678999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||++|||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++ .++||++||+++..+.++++.
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-----~g~Iv~isS~~~~~~~~~~~~ 156 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-----GASVLTLSYLGGVKYVPHYNV 156 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-----CCcEEEEecCCCccCCCcchh
Confidence 999999999998641 256788999999999999999999999999999642 368999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHH-HHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFY-FKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~-~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.... -|...... ..... .....+ +..+++|....+..++..
T Consensus 157 Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~ 233 (274)
T PRK08415 157 MGVAKAALESSVRYLAVDLG--KKGIRVNAISAGPIKT-LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSD 233 (274)
T ss_pred hhhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCcccc-HHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhh
Confidence 99999999999999998754 4556888998886643 33221111 00000 011111 346789999988887764
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-22 Score=215.94 Aligned_cols=214 Identities=13% Similarity=0.088 Sum_probs=172.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||++|||+++|++|+ +|++++++.++.+..+++.+++++.+. .+.+++||++|+++++++++++.+.+|+||
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999 586555544434455666777776654 588899999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
++|||||+.. ...+.+.+.+++.+++++|+.+.+++.+.++|.|++ ....++||++||+++..+.++...|+++|++
T Consensus 80 ~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 156 (246)
T PRK05599 80 LAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRA--QTAPAAIVAFSSIAGWRARRANYVYGSTKAG 156 (246)
T ss_pred EEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHh--cCCCCEEEEEeccccccCCcCCcchhhHHHH
Confidence 9999999876 555667788889999999999999999999998743 2235799999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+.+|++.++.+.. ..++++++|.+|.+. +.|...... .. ..++|++..+.+..++..+.
T Consensus 157 ~~~~~~~la~el~--~~~I~v~~v~PG~v~-T~~~~~~~~--------~~-~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 157 LDAFCQGLADSLH--GSHVRLIIARPGFVI-GSMTTGMKP--------AP-MSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred HHHHHHHHHHHhc--CCCceEEEecCCccc-chhhcCCCC--------CC-CCCCHHHHHHHHHHHHhcCC
Confidence 9999999988743 456788999888774 334321110 01 13689999999999888764
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-22 Score=218.47 Aligned_cols=220 Identities=13% Similarity=0.040 Sum_probs=170.4
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||++ |||+++|+.|+++|+++++ ..|++..++..+++.+. +. ..+++||++|+++++++++.+.+++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~-~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWF-TYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEE-EeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHc
Confidence 579999999997 9999999999999996554 45654444445555443 43 3567899999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||+||||||+... ..++.+.+.++|++++++|+.|++.+.+.+.|+|+ +.+.||++||+++..+.+++..
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~-----~~G~Iv~isS~~~~~~~~~~~~ 159 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH-----DGGSIVTLTYYGAEKVIPNYNV 159 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc-----cCceEEEEecCccccCCCcccc
Confidence 999999999997541 24677899999999999999999999999999863 2378999999999988999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|.... ............+ +...|+|..+.+..++..
T Consensus 160 Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~ 236 (260)
T PRK06603 160 MGVAKAALEASVKYLANDMG--ENNIRVNAISAGPIKT-LASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSE 236 (260)
T ss_pred hhhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCcCcc-hhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999998754 4557889999887743 342211 1111111112222 245788998888887753
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-22 Score=216.68 Aligned_cols=221 Identities=12% Similarity=0.049 Sum_probs=174.7
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEec----CC-------CchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSG----RS-------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 133 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~----r~-------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 133 (1005)
++|++|||||+ +|||+++|++|+++|++++++.. |. +...+..+++++.|.++.++++|++|.++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 57999999998 49999999999999997666531 11 1112344556677888999999999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy612 134 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 134 ~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~ 213 (1005)
++++++.+.+|++|+||||||... ..++.+.+.++|++++++|+.|++.+.+.++|.|++ ...++||++||+++..
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~ 160 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK---KSGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---cCCeEEEEEcccccCC
Confidence 999999999999999999999876 678899999999999999999999999999998643 3468999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCC-CCCHHHHHHHHHH
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK-VLHENDGLKLFEQ 292 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~-~l~~~~~~~~l~~ 292 (1005)
+.+++..|+++|++++.|++.++.+.. ..++++++|.||.+.. ++... ...........+. ..++++..+.+..
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~v~PG~i~t-~~~~~--~~~~~~~~~~~~~~~~~~~d~a~~~~~ 235 (256)
T PRK12859 161 PMVGELAYAATKGAIDALTSSLAAEVA--HLGITVNAINPGPTDT-GWMTE--EIKQGLLPMFPFGRIGEPKDAARLIKF 235 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEEEEccccC-CCCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999888754 3457999999998854 43221 1111112222222 3468888888877
Q ss_pred HHhc
Q psy612 293 LLIQ 296 (1005)
Q Consensus 293 ~l~~ 296 (1005)
++..
T Consensus 236 l~s~ 239 (256)
T PRK12859 236 LASE 239 (256)
T ss_pred HhCc
Confidence 6643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-22 Score=241.96 Aligned_cols=228 Identities=14% Similarity=0.069 Sum_probs=185.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||+++|++|+++|+++++ ++|+ +..+++.+.++..|.++.++.||++|+++++++++++.+.+|+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVA-SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999997544 4554 4455666677777888999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ...+.+.+.++|++++++|+.|+++++++++|.|++ ....++||++||+++..+.++.+.|+++|
T Consensus 393 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 393 PDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVE--RGTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred CcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 999999999987 778889999999999999999999999999999753 22357999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---------hhhh-HHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---------EQTD-FYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---------~~~~-~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
+++++|++.++.+.. ..++++++|.+|.+.. .|..... .... ......+...++++++++.+..++.
T Consensus 470 aa~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~ 546 (582)
T PRK05855 470 AAVLMLSECLRAELA--AAGIGVTAICPGFVDT-NIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVK 546 (582)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEEeCCCcc-cchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHH
Confidence 999999999988744 4567999999998854 3322110 0000 0111123345789999999999998
Q ss_pred ccchhh
Q psy612 296 QDKIQY 301 (1005)
Q Consensus 296 ~~~~~~ 301 (1005)
.+.+.+
T Consensus 547 ~~~~~~ 552 (582)
T PRK05855 547 RNKAVV 552 (582)
T ss_pred cCCCEE
Confidence 876643
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-22 Score=216.49 Aligned_cols=221 Identities=13% Similarity=0.080 Sum_probs=168.2
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-C-CCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-F-NNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+|++|||||+ +|||+++|+.|+++|+++++ ..|+....+..+++.+ . +.++.+++||++|+++++++++++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVF-TYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEE-ecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 57999999997 89999999999999996555 4444322222233322 2 467889999999999999999999999
Q ss_pred cCCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 143 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|+||++|||||+... ..++.+.+.++|++++++|+.+++++.++++|+|+ + .++||++||+++..+.++++
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~g~Iv~isS~~~~~~~~~~~ 159 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT---E--GGSIVTLTYLGGERVVQNYN 159 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc---c--CceEEEEcccCCccCCCCCc
Confidence 9999999999997641 24677889999999999999999999999999863 2 47899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|.... ........+...+ +..++++....+..++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s 236 (257)
T PRK08594 160 VMGVAKASLEASVKYLANDLG--KDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS 236 (257)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hcCCEEeeeecCcccC-HhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence 999999999999999988754 4457888998876643 332110 1111111111122 24678888888777665
Q ss_pred c
Q psy612 296 Q 296 (1005)
Q Consensus 296 ~ 296 (1005)
.
T Consensus 237 ~ 237 (257)
T PRK08594 237 D 237 (257)
T ss_pred c
Confidence 3
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-22 Score=217.04 Aligned_cols=221 Identities=10% Similarity=0.001 Sum_probs=169.2
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++ |||+++|+.|+++|++++ +..|++..++..+++......+.++.||++|+++++++++++.++||
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vi-l~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELA-FTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEE-EEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 579999999985 999999999999998754 55565444455566655444567889999999999999999999999
Q ss_pred CccEEEEcCcccCcc----chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 145 PIDGVLHIAGISGLT----SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~----~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+||++|||||+.... ..+.+.+.++|++++++|+.|++.+.+++.|+| . +.+.||++||+++..+.+++..
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~--~~g~Iv~iss~~~~~~~~~~~~ 158 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML---N--PGSALLTLSYLGAERAIPNYNV 158 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh---c--CCcEEEEEecCCCCCCCCCcch
Confidence 999999999986411 126678999999999999999999999998864 2 2378999999999888899999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--h-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--Q-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|...... . .........+ +...+++....+..++..
T Consensus 159 Y~asKaal~~l~~~la~el~--~~gIrVn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~ 235 (262)
T PRK07984 159 MGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD 235 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhc--ccCcEEeeeecCcccc-hHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCc
Confidence 99999999999999998854 4467888998886643 34221111 0 0111111222 345788888888777653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.8e-22 Score=213.08 Aligned_cols=222 Identities=12% Similarity=0.117 Sum_probs=173.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||+||||+++|++|+++|++++++.++.. ...+..++++..+.++.++.||++|.+++.++++++.+.+++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999998777665543 334455666666778889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|++++++|+.|++.+.+++.+.|++ .+.++||++||..+..+.+++..|+++|
T Consensus 82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~y~~sK 157 (246)
T PRK12938 82 IDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVE---RGWGRIINISSVNGQKGQFGQTNYSTAK 157 (246)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCeEEEEEechhccCCCCCChhHHHHH
Confidence 999999999876 677889999999999999999999999999998643 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|++.++.+.. ..++++.+|.+|.+.+ .+.... ............. ...++++..+.+..++.
T Consensus 158 ~a~~~~~~~l~~~~~--~~gi~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~ 226 (246)
T PRK12938 158 AGIHGFTMSLAQEVA--TKGVTVNTVSPGYIGT-DMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLAS 226 (246)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEEecccCC-chhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence 999999988877643 3456888999887754 332111 1111111111111 23456677666666554
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=212.06 Aligned_cols=226 Identities=17% Similarity=0.127 Sum_probs=179.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+||||++++++|+++|++++++.++.+..+++...+... +.++.++++|++|++++.++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999976544444334444555555443 568999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-ChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-~~~Yaaa 224 (1005)
+|+||||||+.. ...+.+.+.+.+++++++|+.|++.+.+.+.+.|++ .+.++||++||..+..|.++ +..|+++
T Consensus 82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 157 (248)
T PRK08251 82 LDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFRE---QGSGHLVLISSVSAVRGLPGVKAAYAAS 157 (248)
T ss_pred CCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCeEEEEeccccccCCCCCcccHHHH
Confidence 999999999977 667778889999999999999999999999998643 34678999999999999886 6899999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVL 304 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~ 304 (1005)
|++++.+++.++.+.. ..++++++|.+|.+. +.|..... .+...++++++++.+.+.+..+.....+.
T Consensus 158 K~a~~~~~~~l~~~~~--~~~i~v~~v~pg~v~-t~~~~~~~---------~~~~~~~~~~~a~~i~~~~~~~~~~~~~~ 225 (248)
T PRK08251 158 KAGVASLGEGLRAELA--KTPIKVSTIEPGYIR-SEMNAKAK---------STPFMVDTETGVKALVKAIEKEPGRAAVP 225 (248)
T ss_pred HHHHHHHHHHHHHHhc--ccCcEEEEEecCcCc-chhhhccc---------cCCccCCHHHHHHHHHHHHhcCCCeEEcC
Confidence 9999999998887643 345688899887774 44432211 12346889999999999988766554443
Q ss_pred chhhH
Q psy612 305 SGELE 309 (1005)
Q Consensus 305 ~~~~~ 309 (1005)
..+|.
T Consensus 226 ~~~~~ 230 (248)
T PRK08251 226 WWPWA 230 (248)
T ss_pred cchHH
Confidence 33443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-22 Score=215.78 Aligned_cols=220 Identities=10% Similarity=0.005 Sum_probs=166.6
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||+ +|||+++|+.|+++|+++++ ..|+....+..+++.+....+.+++||++|+++++++++++.+++|
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAV-TYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEE-EeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 57999999998 59999999999999987555 4555433233344433222456889999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+||++|||||+... ..++.+.+.++|++++++|+.|++++++.++|+|+ ..++||++||.++..+.++++.|
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~-----~~g~Ii~iss~~~~~~~~~~~~Y 162 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT-----NGGSLLTMSYYGAEKVVENYNLM 162 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc-----cCCEEEEEeccccccCCccchhh
Confidence 99999999998641 24678899999999999999999999999999963 24789999999998888999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... .......+...+ +..++++....+..++.
T Consensus 163 ~asKaal~~l~~~la~el~--~~gI~Vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s 237 (258)
T PRK07533 163 GPVKAALESSVRYLAAELG--PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLAS 237 (258)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEecCCcC-ChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC
Confidence 9999999999999988754 445688899887664 44432111 111111111122 24567887777776654
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=214.18 Aligned_cols=188 Identities=20% Similarity=0.254 Sum_probs=158.8
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
-.+|++|||||++|||+++|+.|++.|++++|..++.+..++....+...+ .++..+.||++++++++++++...++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999987777777676667777666544 46999999999999999999999998
Q ss_pred -cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC-h
Q psy612 143 -IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG-TIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-C 219 (1005)
Q Consensus 143 -~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g-~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-~ 219 (1005)
+|+||++|||||......++.+++.++|++++++|+.| .+.+.+++.+++ .+...+.|+++||+++..+.+++ .
T Consensus 86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~---~~~~gg~I~~~ss~~~~~~~~~~~~ 162 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPML---KKSKGGSIVNISSVAGVGPGPGSGV 162 (270)
T ss_pred hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHH---HhcCCceEEEEeccccccCCCCCcc
Confidence 79999999999998744479999999999999999996 556666666663 34567889999999999887777 8
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
.|+++|+++++|++.++.+.. ..++|+.+|++|....
T Consensus 163 ~Y~~sK~al~~ltr~lA~El~--~~gIRvN~v~PG~i~T 199 (270)
T KOG0725|consen 163 AYGVSKAALLQLTRSLAKELA--KHGIRVNSVSPGLVKT 199 (270)
T ss_pred cchhHHHHHHHHHHHHHHHHh--hcCcEEEEeecCcEeC
Confidence 999999999999999888755 4456888888876644
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-22 Score=217.36 Aligned_cols=215 Identities=14% Similarity=0.138 Sum_probs=173.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||+++++.|+++|+++++ ..|++ ..++..+.+ + ++.++.||++|++++.++++.+.+.+|+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAI-GDLDEALAKETAAEL---G-LVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---c-cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999987544 45543 223333333 2 5788999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|++|||||+.. ...+.+.+.++|++++++|+.|++++++.++|.|+ +.+.++||++||+++..+.++++.|+++|
T Consensus 79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~~~g~iv~isS~~~~~~~~~~~~Y~asK 154 (273)
T PRK07825 79 IDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMV---PRGRGHVVNVASLAGKIPVPGMATYCASK 154 (273)
T ss_pred CCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCCEEEEEcCccccCCCCCCcchHHHH
Confidence 999999999987 77888999999999999999999999999999964 34567999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 300 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~ 300 (1005)
+++.+|++.++.+.. ..+++++.|.++.+ .+.|..... ...+...+++++.++.+..++..+...
T Consensus 155 aa~~~~~~~l~~el~--~~gi~v~~v~Pg~v-~t~~~~~~~-------~~~~~~~~~~~~va~~~~~~l~~~~~~ 219 (273)
T PRK07825 155 HAVVGFTDAARLELR--GTGVHVSVVLPSFV-NTELIAGTG-------GAKGFKNVEPEDVAAAIVGTVAKPRPE 219 (273)
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEeCCcC-cchhhcccc-------cccCCCCCCHHHHHHHHHHHHhCCCCE
Confidence 999999988877643 34568888877665 444432211 112345689999999999998876543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-22 Score=216.58 Aligned_cols=223 Identities=12% Similarity=0.007 Sum_probs=170.2
Q ss_pred ccCCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 65 IKQGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 65 ~~~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+-.+|++|||||+ +|||+++|+.|+++|++++ +.+|++...+..+++.+.-..+..+++|++|+++++++++++.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~-l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELA-FTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEE-EEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 3467999999997 8999999999999999654 556654333444444332123567899999999999999999999
Q ss_pred cCCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 143 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|+||++|||||+... ..++.+.+.++|++++++|+.|++.+.+++.|+|+ +.+.||++||+++..+.+++.
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~-----~~g~Iv~iss~~~~~~~p~~~ 160 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT-----DGGSILTLTYYGAEKVMPHYN 160 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCceEEEEeccccccCCCcch
Confidence 9999999999998641 24677899999999999999999999999999853 247899999999988899999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHHHH-hcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFK-SSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~-~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+ ...+ +..+|+|..+.+..++.
T Consensus 161 ~Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s 237 (272)
T PRK08159 161 VMGVAKAALEASVKYLAVDLG--PKNIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLS 237 (272)
T ss_pred hhhhHHHHHHHHHHHHHHHhc--ccCeEEEEeecCCcC-CHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhC
Confidence 999999999999999998854 456788899887664 444321111 0001111 1111 24578899888888775
Q ss_pred c
Q psy612 296 Q 296 (1005)
Q Consensus 296 ~ 296 (1005)
.
T Consensus 238 ~ 238 (272)
T PRK08159 238 D 238 (272)
T ss_pred c
Confidence 3
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-22 Score=217.44 Aligned_cols=185 Identities=14% Similarity=0.115 Sum_probs=158.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||+++++.|+++|++++++.++.+..++..+++.+. +.++.++.+|++|+++++++++++.+.+|
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999997555444434445555566544 35788999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|++.+++|+.+.+.+.+.++|.|++ .+.++||++||+++..+.+++..|+++
T Consensus 87 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~y~as 162 (265)
T PRK07062 87 GVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRA---SAAASIVCVNSLLALQPEPHMVATSAA 162 (265)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---cCCcEEEEeccccccCCCCCchHhHHH
Confidence 9999999999876 678889999999999999999999999999999643 345799999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+++.+|++.++.+.. ..++++.+|.+|...
T Consensus 163 Kaal~~~~~~la~e~~--~~gi~v~~i~PG~v~ 193 (265)
T PRK07062 163 RAGLLNLVKSLATELA--PKGVRVNSILLGLVE 193 (265)
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEecCccc
Confidence 9999999999888754 345688899877664
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=236.14 Aligned_cols=222 Identities=15% Similarity=0.151 Sum_probs=172.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
....+|++|||||++|||+++|++|+++|++++++.++.+..+++.+ ..+.++.++.+|++|+++++++++++.+++
T Consensus 265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAE---ALGDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999999865554433333333322 335678889999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||.++..+.++++.|++
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~Y~a 416 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-----QGGVIVNLGSIASLLALPPRNAYCA 416 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-----cCCEEEEECchhhcCCCCCCchhHH
Confidence 99999999999864245788899999999999999999999999999861 3579999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc----hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+|+++++|++.++.+.. ..++++.+|.+|.+. +.|..... .......+...+ +..++++..+.+..++..
T Consensus 417 sKaal~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~ 491 (520)
T PRK06484 417 SKAAVTMLSRSLACEWA--PAGIRVNTVAPGYIE-TPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASP 491 (520)
T ss_pred HHHHHHHHHHHHHHHhh--hhCeEEEEEEeCCcc-CchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999988754 445789999988774 33432111 011111122222 235788888888877653
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=215.82 Aligned_cols=193 Identities=13% Similarity=0.114 Sum_probs=159.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||+++|+.|+++|++++++.++.+..++..+++...+.++.++.+|++|.++++++++.+.+.+|++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999875555443344455666666667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccCCCCChhhhH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN---KLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~---~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||||||... ..++.+.+.++|+..+++|+.|++++.++++|.|++.... ..++||++||+++..+.++++.|++
T Consensus 85 d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 163 (287)
T PRK06194 85 HLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNV 163 (287)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHH
Confidence 99999999987 6778889999999999999999999999999997542211 1268999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+|++++.|++.++.+.......+++.++.||.. .+.|
T Consensus 164 sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i-~t~~ 200 (287)
T PRK06194 164 SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFV-PTGI 200 (287)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcc-cCcc
Confidence 999999999988776432344567778877654 4444
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=216.75 Aligned_cols=222 Identities=14% Similarity=0.074 Sum_probs=171.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC--CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|+++++..++. +..+++.+.++..+.++.++.+|++|++++.++++++.+.+|
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998765543322 223444445556677888999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||++|||||......++.+.+.++|++++++|+.|++++++++.|+|++ .++||++||+++..+.+++..|+++
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~iv~iSS~~~~~~~~~~~~Y~as 202 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-----GASIITTSSIQAYQPSPHLLDYAAT 202 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-----CCEEEEECCchhccCCCCcchhHHH
Confidence 99999999997532466888999999999999999999999999998642 3789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+...+ +...+++....+..++..
T Consensus 203 Kaal~~l~~~la~el~--~~gIrvn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~ 275 (294)
T PRK07985 203 KAAILNYSRGLAKQVA--EKGIRVNIVAPGPIW-TALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ 275 (294)
T ss_pred HHHHHHHHHHHHHHHh--HhCcEEEEEECCcCc-cccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCh
Confidence 9999999999987743 334688889877654 4442211 111 1111111122 245788888888777654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=213.64 Aligned_cols=220 Identities=13% Similarity=-0.000 Sum_probs=166.1
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++||||| ++|||+++|+.|+++|+++++. .|.....+..+++.+ .+. ..+++||++|+++++++++++.+++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFT-YVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEE-ccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHh
Confidence 5789999996 6899999999999999876554 443222333334433 343 3568999999999999999999999
Q ss_pred CCccEEEEcCcccCcc---c-hhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 144 GPIDGVLHIAGISGLT---S-NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~---~-~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
|+||++|||||+.... . .+.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.+++.
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-----~~g~Ii~iss~~~~~~~~~~~ 157 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-----DDASLLTLSYLGAERVVPNYN 157 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-----CCceEEEEeccccccCCCCcc
Confidence 9999999999986411 1 245688999999999999999999999999862 237899999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hh-hhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|..... .. .........+ +..+++|..+.+..++.
T Consensus 158 ~Y~asKaal~~l~~~la~el~--~~gIrVn~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s 234 (260)
T PRK06997 158 TMGLAKASLEASVRYLAVSLG--PKGIRANGISAGPIK-TLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLS 234 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCccc-cchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhC
Confidence 999999999999999988754 445788899988664 34432111 11 1111111122 34578899888888776
Q ss_pred c
Q psy612 296 Q 296 (1005)
Q Consensus 296 ~ 296 (1005)
.
T Consensus 235 ~ 235 (260)
T PRK06997 235 D 235 (260)
T ss_pred c
Confidence 4
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=211.75 Aligned_cols=185 Identities=17% Similarity=0.176 Sum_probs=159.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||++|||++++++|+++|++++++.++.+..++...++...+.++.++++|++++++++++++++.+++|+||
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999998755555444455566667776677889999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||+.. ..++.+.+.++|++++++|+.|++.+.+.+.+.|++. ...+.||++||..+..+.+++..|+++|++
T Consensus 82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 158 (256)
T PRK08643 82 VVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL--GHGGKIINATSQAGVVGNPELAVYSSTKFA 158 (256)
T ss_pred EEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCCEEEEECccccccCCCCCchhHHHHHH
Confidence 9999999876 6778889999999999999999999999999987532 234789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++.|++.++.+.. ..++++++|.+|.+.
T Consensus 159 ~~~~~~~la~e~~--~~gi~v~~i~Pg~v~ 186 (256)
T PRK08643 159 VRGLTQTAARDLA--SEGITVNAYAPGIVK 186 (256)
T ss_pred HHHHHHHHHHHhc--ccCcEEEEEeeCCCc
Confidence 9999999987743 345688888877554
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=217.71 Aligned_cols=224 Identities=13% Similarity=0.035 Sum_probs=169.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-----------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-----------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISE 135 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-----------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~ 135 (1005)
++|++|||||++|||+++|+.|+++|++++++ .|+ +..++..++++..+.++.+++||++|+++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVT-GRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-ecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 57999999999999999999999999865554 443 223445566766677888999999999999999
Q ss_pred HHHHHhhcCCccEEEEcC-cccC---ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy612 136 INSIINNIGPIDGVLHIA-GISG---LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 211 (1005)
Q Consensus 136 ~~~i~~~~g~idgvIh~A-G~~~---~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~ 211 (1005)
++++.+++|+||++|||| |... ...++.+.+.++|++++++|+.+.+.+.++++|+|++ ...+.||++||.++
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~---~~~g~IV~isS~~~ 162 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIR---RPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhh---CCCcEEEEECCccc
Confidence 999999999999999999 8531 1256778899999999999999999999999999743 33589999999876
Q ss_pred ccC---CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc----chhhhHHHHhcC--CCCCC
Q psy612 212 ILG---DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDFYFKSSK--QKVLH 282 (1005)
Q Consensus 212 ~~g---~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~~~~~~g--~~~l~ 282 (1005)
..+ .++...|+++|+++.+|++.++.+.. ..++++.+|.+|.. .+.|.... ............ ....+
T Consensus 163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIrVn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 239 (305)
T PRK08303 163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGATAVALTPGWL-RSEMMLDAFGVTEENWRDALAKEPHFAISET 239 (305)
T ss_pred cccCcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEecCCcc-ccHHHHHhhccCccchhhhhccccccccCCC
Confidence 542 34678899999999999999988754 45578899988755 45553210 000001111111 12236
Q ss_pred HHHHHHHHHHHHhcc
Q psy612 283 ENDGLKLFEQLLIQD 297 (1005)
Q Consensus 283 ~~~~~~~l~~~l~~~ 297 (1005)
+++....+..++...
T Consensus 240 peevA~~v~fL~s~~ 254 (305)
T PRK08303 240 PRYVGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHHHHcCc
Confidence 888888888877544
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=210.04 Aligned_cols=186 Identities=13% Similarity=0.082 Sum_probs=156.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-C
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG-P 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g-~ 145 (1005)
.+++++||||++|||+++|+.|+++|++++++.++.+..++..+++++.+.++..+.||++|+++++++++++.+++| +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999755554444455666677777777888999999999999999999999999 9
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||......++.+.+.++|.++++.|+.+++.+.+.++|+|++ ..+.+.||++||..+. ++...|+++|
T Consensus 84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~--~~~~g~Iv~isS~~~~---~~~~~Y~asK 158 (227)
T PRK08862 84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRK--RNKKGVIVNVISHDDH---QDLTGVESSN 158 (227)
T ss_pred CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCceEEEEecCCCC---CCcchhHHHH
Confidence 9999999986543567889999999999999999999999999999753 2235799999997654 5678899999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
+++.+|++.++.+.. ..++++.+|++|+....
T Consensus 159 aal~~~~~~la~el~--~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 159 ALVSGFTHSWAKELT--PFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEecCcCcCC
Confidence 999999999988754 45579999998877543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=211.02 Aligned_cols=223 Identities=11% Similarity=0.079 Sum_probs=175.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++ .+.. .++..++++..+.++.++++|++|.+++.++++++.+++|++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~-~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI-NIVE-PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEe-cCcc-hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999999999876544 4443 344556666667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|++ ..+.+.||++||.++..+.++...|+++|+
T Consensus 87 D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (253)
T PRK08993 87 DILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIA--QGNGGKIINIASMLSFQGGIRVPSYTASKS 163 (253)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--CCCCeEEEEECchhhccCCCCCcchHHHHH
Confidence 99999999876 677889999999999999999999999999998743 223578999999999999899999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|..... .......+... -+...|+|....+..++...
T Consensus 164 a~~~~~~~la~e~~--~~gi~v~~v~pG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 164 GVMGVTRLMANEWA--KHNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSA 235 (253)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEeeCccc-CcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999988744 345688888877764 44432111 11111111111 13467888888888877543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=211.55 Aligned_cols=223 Identities=17% Similarity=0.167 Sum_probs=174.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||++++++|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++.+.+.+|++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999865555444444556666777667788899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++++.+.+.+.|++ .+.++||++||+.+..+.++...|+++|+
T Consensus 88 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (254)
T PRK08085 88 DVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVK---RQAGKIINICSMQSELGRDTITPYAASKG 163 (254)
T ss_pred CEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEEccchhccCCCCCcchHHHHH
Confidence 99999999876 677888999999999999999999999999998642 34588999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|.+.. .|..... ... ........+ ...++++....+..++..
T Consensus 164 a~~~~~~~la~e~~--~~gi~v~~v~pG~~~t-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 164 AVKMLTRGMCVELA--RHNIQVNGIAPGYFKT-EMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred HHHHHHHHHHHHHH--hhCeEEEEEEeCCCCC-cchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999887743 3456888888876643 3322110 111 111111121 234677877777776653
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=212.94 Aligned_cols=224 Identities=12% Similarity=0.043 Sum_probs=173.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|++++++.+|+. ..++..++++. .+.++.++++|++|+++++++++++.+.+|
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999997655544443 33444455544 366899999999999999999999999999
Q ss_pred CccEEEEcCcccCc-----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 145 PIDGVLHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 145 ~idgvIh~AG~~~~-----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
++|+||||||+... ..++.+.+.++|++++++|+.+.+.+.+.++|.|+ +.+.++||++||+.+..+.++..
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~g~iv~isS~~~~~~~~~~~ 163 (260)
T PRK08416 87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRME---KVGGGSIISLSSTGNLVYIENYA 163 (260)
T ss_pred CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhh---ccCCEEEEEEeccccccCCCCcc
Confidence 99999999987521 34677888999999999999999999999999864 33457899999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhh-hHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|++++.|++.++.+.. ..++++.+|.+|... +.|..... ... ....+...+ +..++++....+..++.
T Consensus 164 ~Y~asK~a~~~~~~~la~el~--~~gi~v~~v~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~ 240 (260)
T PRK08416 164 GHGTSKAAVETMVKYAATELG--EKNIRVNAVSGGPID-TDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCS 240 (260)
T ss_pred cchhhHHHHHHHHHHHHHHhh--hhCeEEEEEeeCccc-ChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999988754 345688899887664 44532111 111 111111222 24678888888887765
Q ss_pred c
Q psy612 296 Q 296 (1005)
Q Consensus 296 ~ 296 (1005)
.
T Consensus 241 ~ 241 (260)
T PRK08416 241 E 241 (260)
T ss_pred h
Confidence 3
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=215.55 Aligned_cols=218 Identities=12% Similarity=0.136 Sum_probs=175.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+||||+++|+.|+++|++++++.++.+..+++.+++...+.++.++.+|++|.+++.++++.+.+.+|+|
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999999866555544445556666676667788899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccC--CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-CCCChhhhH
Q psy612 147 DGVLHIAGISGLTSNILEA--NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSCDYAM 223 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~--t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-~~g~~~Yaa 223 (1005)
|+||||||+.. ..++.+. +.++++..+++|+.|+++++++++|.|++ ...++||++||.++..+ .++.+.|++
T Consensus 119 d~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~p~~~~Y~a 194 (293)
T PRK05866 119 DILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE---RGDGHIINVATWGVLSEASPLFSVYNA 194 (293)
T ss_pred CEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcEEEEECChhhcCCCCCCcchHHH
Confidence 99999999876 5555443 46889999999999999999999998643 34578999999876653 678889999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+|+++++|++.++.+.. ..++++.+|.||.+.. .|.... ....++..++++++++.+...+..+.
T Consensus 195 sKaal~~l~~~la~e~~--~~gI~v~~v~pg~v~T-~~~~~~-------~~~~~~~~~~pe~vA~~~~~~~~~~~ 259 (293)
T PRK05866 195 SKAALSAVSRVIETEWG--DRGVHSTTLYYPLVAT-PMIAPT-------KAYDGLPALTADEAAEWMVTAARTRP 259 (293)
T ss_pred HHHHHHHHHHHHHHHhc--ccCcEEEEEEcCcccC-cccccc-------ccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 99999999999988753 4467899999997754 343211 01124456899999999999887654
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=200.65 Aligned_cols=181 Identities=20% Similarity=0.238 Sum_probs=160.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|.+++|||.||||+++++.|+++|.+++++..|.+..+ ...+|++. ..++.+++|||++..+++++++++...||
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3899999999999999999999999999999988877643 45566654 46789999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
.||++||+||+.. .++|++++.+|+.|..+-+...+|+|.+....++|-||++||++|+.+.|-+..|+|+
T Consensus 83 ~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~As 153 (261)
T KOG4169|consen 83 TIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAAS 153 (261)
T ss_pred ceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhc
Confidence 9999999999975 3569999999999999999999999988777789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+++-.|+++++..-...+.+++..++++|...
T Consensus 154 KaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~ 186 (261)
T KOG4169|consen 154 KAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTR 186 (261)
T ss_pred ccceeeeehhhhhhhhHhhcCEEEEEECCCcch
Confidence 999999999866554444556699999998764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-21 Score=209.53 Aligned_cols=223 Identities=11% Similarity=0.075 Sum_probs=176.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+|++|||||++|||++++++|+++|++++++.+|+. ..++..++++..+.++.++.+|+++.++++++++++.+.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999998776666553 3455666777778889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++.+|+.|++++.+++.++|.+ ....++||++||..+..+.++...|+++|+
T Consensus 82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 158 (256)
T PRK12743 82 DVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVK--QGQGGRIINITSVHEHTPLPGASAYTAAKH 158 (256)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence 99999999876 567788899999999999999999999999998743 223578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh-HHHHh-cCCCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKS-SKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~-~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.+++.++.+.. ..++++++|.+|.+... |......... ..... ......++++..+.+..++..
T Consensus 159 a~~~l~~~la~~~~--~~~i~v~~v~Pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 227 (256)
T PRK12743 159 ALGGLTKAMALELV--EHGILVNAVAPGAIATP-MNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSE 227 (256)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEEeCCccCc-cccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999998887643 34568899999877643 3211111111 11111 112345788888888777643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=208.81 Aligned_cols=222 Identities=18% Similarity=0.169 Sum_probs=175.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++++||||+||||.++|++|+++|+.++++.+|++ ..++..+.++..+.++.++++|++|++++.++++++.+.+++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999998776655543 334455666666778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.+.+++++++|+.+++++.++++|.|.+ ...++||++||+++..+.++...|+++|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 160 (247)
T PRK12935 85 VDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITE---AEEGRIISISSIIGQAGGFGQTNYSAAK 160 (247)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence 999999999876 667788899999999999999999999999998643 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhc-CCCCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSS-KQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~-g~~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|++.++.+.. ..+++++.|.+|.+. +.|........ ....... .-....+++..+.+..++.
T Consensus 161 ~a~~~~~~~l~~~~~--~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~ 229 (247)
T PRK12935 161 AGMLGFTKSLALELA--KTNVTVNAICPGFID-TEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCR 229 (247)
T ss_pred HHHHHHHHHHHHHHH--HcCcEEEEEEeCCCc-ChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcC
Confidence 999999998877643 345688888888764 44432221111 1111111 1124678888888877664
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=208.61 Aligned_cols=222 Identities=16% Similarity=0.113 Sum_probs=178.3
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
...|+++||||+||||+.+++.|+++|.+++ ++.|+ +..+++.+.+++.+.++.++.+|++|++++.++++.+.+++|
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLA-LVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999998644 45555 334455566666677899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ..++.+.+.++|++++++|+.+++++.+.++++|++ .+.++||++||..+..+.+++..|+++
T Consensus 83 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~s 158 (241)
T PRK07454 83 CPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRA---RGGGLIINVSSIAARNAFPQWGAYCVS 158 (241)
T ss_pred CCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh---cCCcEEEEEccHHhCcCCCCccHHHHH
Confidence 9999999999876 677888899999999999999999999999998643 345789999999999899999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
|++++.+++.++.+.. ..++++++|.||.+... |..... ..... .....+++++..+.+..++..+..
T Consensus 159 K~~~~~~~~~~a~e~~--~~gi~v~~i~pg~i~t~-~~~~~~--~~~~~--~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 159 KAALAAFTKCLAEEER--SHGIRVCTITLGAVNTP-LWDTET--VQADF--DRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred HHHHHHHHHHHHHHhh--hhCCEEEEEecCcccCC-cccccc--ccccc--ccccCCCHHHHHHHHHHHHcCCcc
Confidence 9999999998776543 34569999999888543 321111 00001 112357899999999998876643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-21 Score=210.44 Aligned_cols=225 Identities=12% Similarity=0.074 Sum_probs=177.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++++||||++|||++++++|+++|++++++.++.+..++..+++++.+.++.++.||++|++++.++++++...+|++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999865554444344556666777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++.+.+|+.|++++.+.+++.|++ .+.++||++||+.+..+.+++..|+++|+
T Consensus 90 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 165 (256)
T PRK06124 90 DILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKR---QGYGRIIAITSIAGQVARAGDAVYPAAKQ 165 (256)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEeechhccCCCCccHhHHHHH
Confidence 99999999876 678889999999999999999999999999998643 34688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cchhhhHHHHh-cC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNEQTDFYFKS-SK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~~~~~~~~~-~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+++.++.+.. ..++++.+|.+|.+.+...... ........+.. .. -....+++....+..++...
T Consensus 166 a~~~~~~~la~e~~--~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 166 GLTGLMRALAAEFG--PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred HHHHHHHHHHHHHH--HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 99999999877643 3456888999887765432110 01111111111 11 12467888888887776543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=210.58 Aligned_cols=219 Identities=16% Similarity=0.072 Sum_probs=171.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh-cCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-IGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-~g~id 147 (1005)
|++|||||+||||++++++|+++|++++++.++.+..+++.+.+. +.++.+++||++|.+++.++++.+.+. ++++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 689999999999999999999999876655443333333333332 567899999999999999999988776 79999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ...+.+.+.++++.++++|+.|++.+.+++.++|+ ..+.++||++||..+..|.++...|+++|++
T Consensus 80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa 155 (260)
T PRK08267 80 VLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLK---ATPGARVINTSSASAIYGQPGLAVYSATKFA 155 (260)
T ss_pred EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---hCCCCEEEEeCchhhCcCCCCchhhHHHHHH
Confidence 9999999987 67788899999999999999999999999999864 3456899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.|++.++.+.. ..++++++|. |.|-.+.|.... ...........+ ..+++++....+..++..+
T Consensus 156 ~~~~~~~l~~~~~--~~~i~v~~i~-pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 156 VRGLTEALDLEWR--RHGIRVADVM-PLFVDTAMLDGTSNEVDAGSTKRLG-VRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHhc--ccCcEEEEEe-cCCcCCcccccccchhhhhhHhhcc-CCCCHHHHHHHHHHHHhCC
Confidence 9999999887643 3356888884 555556664321 111111122222 2578899999998888544
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=209.91 Aligned_cols=221 Identities=16% Similarity=0.141 Sum_probs=175.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||++++++|+++|++++++.++ ...++..+.+.+.+.++.++.||+++.+++.++++++.+.+|++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999976666554 54555666666667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||... ..++.+.+.++|++.+++|+.+++++.+++.|+|++ ...++||++||+.+..+.++...|+++|+
T Consensus 93 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (258)
T PRK06935 93 DILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAK---QGSGKIINIASMLSFQGGKFVPAYTASKH 168 (258)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHh---cCCeEEEEECCHHhccCCCCchhhHHHHH
Confidence 99999999876 677888899999999999999999999999999743 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcC-CCCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~ 295 (1005)
++++|++.++.+.. ..++++.+|.+|... +.|.... ........+... -...++++....+..++.
T Consensus 169 a~~~~~~~la~e~~--~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 238 (258)
T PRK06935 169 GVAGLTKAFANELA--AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS 238 (258)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEEecccc-ccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999988754 445688888877654 3332211 111111112222 235667888777776664
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=211.70 Aligned_cols=222 Identities=12% Similarity=0.038 Sum_probs=172.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||.+++++|+++|++++++.++.+..++..+++...+.++.++.+|++++++++++++++.+.++++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999875555444344445555666666678899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++.+++|+.|++++.+++.|.|++ ..++||++||+++..+.+++..|+++|+
T Consensus 88 D~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~----~~g~iv~iss~~~~~~~~~~~~Y~asK~ 162 (264)
T PRK07576 88 DVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR----PGASIIQISAPQAFVPMPMQAHVCAAKA 162 (264)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh----CCCEEEEECChhhccCCCCccHHHHHHH
Confidence 99999999766 677888999999999999999999999999998643 2378999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcc-cccccc-hhhhHHH-HhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK-FKIGNN-EQTDFYF-KSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G-m~~~~~-~~~~~~~-~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.|++.++.+.. ..++++++|.||.+.++. |..... ....... ....+ ....+++..+.+..++.
T Consensus 163 a~~~l~~~la~e~~--~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (264)
T PRK07576 163 GVDMLTRTLALEWG--PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLAS 233 (264)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999887743 345688999998876432 321100 1111111 11111 23467777777777764
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-21 Score=211.55 Aligned_cols=216 Identities=15% Similarity=0.110 Sum_probs=170.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+||||++++++|+++|++++++.++.+..++..+++...+ ++.++.+|++|++++.++++++.+++|++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 4789999999999999999999999865555444343444444443333 789999999999999999999999999999
Q ss_pred EEEEcCcccCccchh-ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 148 GVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~-~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
+||||||... .... .+.+.++|+..+++|+.|++++.+.++|.|++ .+.++||++||+++..+.++...|+++|+
T Consensus 81 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~asK~ 156 (257)
T PRK07024 81 VVIANAGISV-GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA---ARRGTLVGIASVAGVRGLPGAGAYSASKA 156 (257)
T ss_pred EEEECCCcCC-CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh---cCCCEEEEEechhhcCCCCCCcchHHHHH
Confidence 9999999865 3333 33788999999999999999999999998643 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++.|++.++.+.. ..++++++|.+|.+... |...... .....+++++..+.+..++..+..
T Consensus 157 a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t~-~~~~~~~--------~~~~~~~~~~~a~~~~~~l~~~~~ 218 (257)
T PRK07024 157 AAIKYLESLRVELR--PAGVRVVTIAPGYIRTP-MTAHNPY--------PMPFLMDADRFAARAARAIARGRR 218 (257)
T ss_pred HHHHHHHHHHHHhh--ccCcEEEEEecCCCcCc-hhhcCCC--------CCCCccCHHHHHHHHHHHHhCCCc
Confidence 99999998876633 34569999999888543 3211100 001236899999999999876653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-21 Score=209.79 Aligned_cols=224 Identities=12% Similarity=0.091 Sum_probs=174.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||.+++++|+++|++++++.++.+..++..+++++.+.++.++.+|++|.+++.++++++.+.+|++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999875555444444455666777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||......++.+.+.++|++++++|+.+++++.++++|.|++ .+.++||++||..+..+.++...|+++|+
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~ii~~sS~~~~~~~~~~~~Y~~sKa 162 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA---QGGGAIVNTASVAGLGAAPKMSIYAASKH 162 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence 999999998652345788899999999999999999999999998643 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhh-hHHHHhc-CCCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQT-DFYFKSS-KQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~-~~~~~~~-g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|.... .... ....... ..+..++++..+.+..++..
T Consensus 163 a~~~~~~~la~e~~--~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~ 234 (253)
T PRK06172 163 AVIGLTKSAAIEYA--KKGIRVNAVCPAVID-TDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234 (253)
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEEeCCcc-ChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCc
Confidence 99999999988753 345688899888664 4443211 0111 0111111 11234677777776666543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=210.86 Aligned_cols=186 Identities=17% Similarity=0.154 Sum_probs=161.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||++++++|+++|++++++.++.+..++..+.++..+.++.+++||++|+++++++++++.+.++++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 57999999999999999999999999986666444444555666677667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++.+.+.++|+|++ .+.++||++||.++..+.++...|+++|+
T Consensus 89 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 164 (265)
T PRK07097 89 DILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK---KGHGKIINICSMMSELGRETVSAYAAAKG 164 (265)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh---cCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence 99999999987 678889999999999999999999999999999753 34688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++..|++.++.+.. ..++++.+|.+|....
T Consensus 165 al~~l~~~la~e~~--~~gi~v~~v~Pg~v~t 194 (265)
T PRK07097 165 GLKMLTKNIASEYG--EANIQCNGIGPGYIAT 194 (265)
T ss_pred HHHHHHHHHHHHhh--hcCceEEEEEeccccc
Confidence 99999999988754 3456888888886644
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-21 Score=210.20 Aligned_cols=223 Identities=12% Similarity=0.076 Sum_probs=179.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+||||++++++|+++|++++++.++.+..++..++++..+.++.+++||++|++++.++++.+.+.++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999997666554445556666777777788999999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||... ...+.+.+.++|++.+++|+.+++.+.+.++|.|++ .+.++||++||+++..+.++.+.|+++|+++
T Consensus 81 lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~ 156 (270)
T PRK05650 81 IVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR---QKSGRIVNIASMAGLMQGPAMSSYNVAKAGV 156 (270)
T ss_pred EEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh---CCCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence 999999887 677889999999999999999999999999999643 3467899999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh---h-HHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---D-FYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~-~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++|++.++.+.. ..++++++|.+|..... |........ . .........++++++.++.+...+..+.
T Consensus 157 ~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~ 227 (270)
T PRK05650 157 VALSETLLVELA--DDEIGVHVVCPSFFQTN-LLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKGE 227 (270)
T ss_pred HHHHHHHHHHhc--ccCcEEEEEecCccccC-cccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence 999999988743 34568888887766543 322111100 0 1111112235899999999999887654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=215.08 Aligned_cols=221 Identities=14% Similarity=0.096 Sum_probs=165.8
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--------C--CC---cEEEEEecC--CC-
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--------F--NN---KAIYIQVDV--SD- 128 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--------~--g~---~v~~~~~Dv--td- 128 (1005)
.+|++||||| ++|||+++|+.|+++|+++++ .++.+.++++...+++ . +. ...++.+|+ ++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 86 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTP 86 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcc
Confidence 6899999999 899999999999999997666 5555555555544432 1 11 146788999 43
Q ss_pred -----------------HHHHHHHHHHHHhhcCCccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 129 -----------------KLKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 129 -----------------~~~v~~~~~~i~~~~g~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
+++++++++++.++||+||+||||||+... ..++.+.+.++|++++++|+.|+++++++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p 166 (303)
T PLN02730 87 EDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166 (303)
T ss_pred ccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 448999999999999999999999986431 36789999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--h
Q psy612 191 TILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--E 267 (1005)
Q Consensus 191 ~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~ 267 (1005)
+|++ .+.||++||+++..+.+++ +.|+++|+++.+|++.++.+... ..++++.+|.+|... +.|..... .
T Consensus 167 ~m~~-----~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~-~~gIrVn~V~PG~v~-T~~~~~~~~~~ 239 (303)
T PLN02730 167 IMNP-----GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR-KYKIRVNTISAGPLG-SRAAKAIGFID 239 (303)
T ss_pred HHhc-----CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCc-CCCeEEEEEeeCCcc-CchhhcccccH
Confidence 9742 2889999999999988876 58999999999999999987531 245788999887664 44543210 0
Q ss_pred hh-hHHHHhcC-CCCCCHHHHHHHHHHHHh
Q psy612 268 QT-DFYFKSSK-QKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 268 ~~-~~~~~~~g-~~~l~~~~~~~~l~~~l~ 295 (1005)
.. ........ .+...|++....+..++.
T Consensus 240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS 269 (303)
T PLN02730 240 DMIEYSYANAPLQKELTADEVGNAAAFLAS 269 (303)
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 00 00111111 123467888877777664
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-21 Score=208.96 Aligned_cols=220 Identities=14% Similarity=0.060 Sum_probs=170.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh----
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN---- 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~---- 141 (1005)
.+|++|||||++|||+++|+.|+++|+++++..+|+ +..++...++...+.++.++.+|+++.+++..+++++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 578999999999999999999999998766655444 444556666766677888999999999999999988765
Q ss_pred hcC--CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 142 NIG--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 142 ~~g--~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
.+| ++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .++||++||+++..+.+++.
T Consensus 83 ~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~ 156 (252)
T PRK12747 83 RTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-----NSRIINISSAATRISLPDFI 156 (252)
T ss_pred hcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-----CCeEEEECCcccccCCCCch
Confidence 334 8999999999865 667888999999999999999999999999998642 37899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhc-CC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSS-KQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~-g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++..|++.++.+.. ..++++.+|.+|.. .+.|.... ........+.. .+ +...+++..+.+..++.
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~--~~girvn~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 233 (252)
T PRK12747 157 AYSMTKGAINTMTFTLAKQLG--ARGITVNAILPGFI-KTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 233 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHh--HcCCEEEEEecCCc-cCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence 999999999999999887743 34568888988766 44443211 11111111111 11 24577888887777654
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-21 Score=210.06 Aligned_cols=221 Identities=14% Similarity=0.085 Sum_probs=173.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++ ++.|+ +..+++.+.++..+.++.++.+|+++++++.++++++.+.+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi-~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVL-IAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999554 44554 3445556666666778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.++|+..+++|+.+++++.+++.++|.+. .+.++||++||+++..+.+++..|+++|
T Consensus 88 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 88 LDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH--SGGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh--cCCeEEEEEccccccCCCCCCchhHHHH
Confidence 999999999876 6778889999999999999999999999999987532 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|++.++.+.. ..+++.+|.+|..... |... .............+ ...++++..+.+..++.
T Consensus 165 ~a~~~~~~~~~~e~~---~~i~v~~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 234 (263)
T PRK07814 165 AALAHYTRLAALDLC---PRIRVNAIAPGSILTS-ALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLAS 234 (263)
T ss_pred HHHHHHHHHHHHHHC---CCceEEEEEeCCCcCc-hhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999999999988753 2468888887665432 2211 11111111111122 23467888888877664
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-21 Score=208.63 Aligned_cols=225 Identities=11% Similarity=0.074 Sum_probs=176.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||.+++++|+++|++++++.++.+..+.+.+++.+.+.++.++++|+++.++++++++++.+.+|++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865544433344556666776667778899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||......++.+.+.++|++.+++|+.|++++.++++|+|+ +...++||++||+.+..+.++++.|+++|+
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 163 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMK---EQGGGSIVNVASVNGVSPGDFQGIYSITKA 163 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH---hCCCcEEEEECchhhcCCCCCCcchHHHHH
Confidence 99999999753235677889999999999999999999999999864 345679999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|..... ...........+ +..+++|..+.+..++...
T Consensus 164 al~~~~~~l~~e~~--~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 164 AVISMTKAFAKECA--PFGIRVNALLPGLTD-TKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred HHHHHHHHHHHHHh--hcCEEEEEEeecccc-CcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCcc
Confidence 99999999987743 345688899988764 44432211 111111111122 3467888888888876543
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-21 Score=215.06 Aligned_cols=221 Identities=13% Similarity=0.071 Sum_probs=171.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~--~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||+++|+.|+++|+++++...+.+ ..++..+.++..+.++.++.||++|.++++++++++.+.+|
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999997665543322 23445566666778899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||.......+.+.+.++|++++++|+.|++++.++++|+|+ ..++||++||+.+..+.+++..|+++
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~Y~as 208 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP-----PGASIINTGSIQSYQPSPTLLDYAST 208 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC-----cCCEEEEECCccccCCCCCchhHHHH
Confidence 9999999999864245788999999999999999999999999999853 24689999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--c-hhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--N-EQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~-~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
|++++.|++.++.+.. ..++++.+|.+|.... -|.... . ...........+ +...+++....+..++.
T Consensus 209 K~a~~~~~~~la~el~--~~gI~v~~v~PG~i~t-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s 280 (300)
T PRK06128 209 KAAIVAFTKALAKQVA--EKGIRVNAVAPGPVWT-PLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS 280 (300)
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEEECcCcC-CCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999987743 3456888888776643 342211 1 111111111122 23467777777766654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=210.80 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=165.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|++|+++|+++ ++++|+. ..++..+ ..+.++.+++||++|++++.++++.+.+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V-~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARV-AIVDIDADNGAAVAA---SLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHH---HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999855 4445543 2333333 33567889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ... .+.+.++|++++++|+.+++++.+++.|+|+ .+.++||++||.++..+.++...|+++|
T Consensus 81 id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~~~Y~asK 154 (261)
T PRK08265 81 VDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA----RGGGAIVNFTSISAKFAQTGRWLYPASK 154 (261)
T ss_pred CCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh----cCCcEEEEECchhhccCCCCCchhHHHH
Confidence 999999999865 333 3678999999999999999999999999864 2457999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---h-hhhHHHH-hcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---E-QTDFYFK-SSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~-~~~~~~~-~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|... +.|..... . ....... ...+ +..++++..+.+..++..
T Consensus 155 aa~~~~~~~la~e~~--~~gi~vn~v~PG~~~-t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 155 AAIRQLTRSMAMDLA--PDGIRVNSVSPGWTW-SRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred HHHHHHHHHHHHHhc--ccCEEEEEEccCCcc-ChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCc
Confidence 999999999987743 345688888877543 33321110 0 0001111 0111 234678888888877754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-21 Score=208.14 Aligned_cols=221 Identities=11% Similarity=0.086 Sum_probs=174.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++++.|+++|++++++.++.+..+...++++..+.++.++.+|++|.+++.++++.+.+.++++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999977666555555555666676667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++ +.+.++|++.+++|+.|++++.+++.|+|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 90 d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (255)
T PRK06113 90 DILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEK---NGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_pred CEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh---cCCcEEEEEecccccCCCCCcchhHHHHH
Confidence 99999999865 4444 6889999999999999999999999998643 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.|++.++.+.. ..++++.+|.+|.+... |.... ........+...+ ....+++..+.+..++.
T Consensus 165 a~~~~~~~la~~~~--~~~i~v~~v~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 233 (255)
T PRK06113 165 AASHLVRNMAFDLG--EKNIRVNGIAPGAILTD-ALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEeccccccc-ccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999887643 34568889998887543 32211 1111111121111 23477888888777764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-21 Score=208.85 Aligned_cols=225 Identities=14% Similarity=0.117 Sum_probs=176.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|++|+++|++++++.+++. ......++++..+.++.++.+|++|.+++.++++.+.+.+|+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999987666544332 334556667666778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|++.+++|+.+++++.+.++++|++ ....++||++||+.+..+.+++..|+++|
T Consensus 86 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 162 (261)
T PRK08936 86 LDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE--HDIKGNIINMSSVHEQIPWPLFVHYAASK 162 (261)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEccccccCCCCCCcccHHHH
Confidence 999999999876 677888999999999999999999999999999754 22357899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++.+|.+|.. ++.|.... ............ -...++++..+.+..++...
T Consensus 163 aa~~~~~~~la~e~~--~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 235 (261)
T PRK08936 163 GGVKLMTETLAMEYA--PKGIRVNNIGPGAI-NTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235 (261)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEECcC-CCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999887654 34568888887755 44443211 111111111111 12456888888888776543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-21 Score=208.02 Aligned_cols=222 Identities=11% Similarity=0.094 Sum_probs=172.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||++++++|+++|++++++.++.+..++..+++... +.++.++.+|+++++++.++++.+.+.+|
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999986555544334445555666554 56889999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ..++.+.+.++|++++.+|+.|++++.+++.|+|++ .+.++||++||+++..+.++.+.|+++
T Consensus 88 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~ii~~sS~~~~~~~~~~~~Y~~s 163 (257)
T PRK09242 88 GLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQ---HASSAIVNIGSVSGLTHVRSGAPYGMT 163 (257)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCceEEEECccccCCCCCCCcchHHH
Confidence 9999999999865 667888999999999999999999999999999753 345789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|.... ........+...+ ...++++....+..++.
T Consensus 164 K~a~~~~~~~la~e~~--~~~i~v~~i~Pg~i~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 235 (257)
T PRK09242 164 KAALLQMTRNLAVEWA--EDGIRVNAVAPWYIR-TPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCM 235 (257)
T ss_pred HHHHHHHHHHHHHHHH--HhCeEEEEEEECCCC-CcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999998877643 345688888877654 3342211 1111111122222 23467777777776664
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-21 Score=206.56 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=172.1
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+|||||++|||+++|++|+++|++++++.++. +..+...++++..+.++.++++|++|.+++.++++++.+.++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999866665554 33455666777777889999999999999999999999999999999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
|||||+.. ...+.+.+.++|+.++++|+.|++++.+.+++.+ ++..+.++||++||.++..|.+++..|+++|++++
T Consensus 81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 157 (239)
T TIGR01831 81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPM--IRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLI 157 (239)
T ss_pred EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH--HhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence 99999877 6678888999999999999999999998875333 22234578999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 230 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 230 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
.|++.++.+.. ..++++++|.+|.+ ++.|............+...+. ..++++..+.+..++..
T Consensus 158 ~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 222 (239)
T TIGR01831 158 GATKALAVELA--KRKITVNCIAPGLI-DTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSD 222 (239)
T ss_pred HHHHHHHHHHh--HhCeEEEEEEEccC-ccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99998877643 33468888877765 4566433222122222333332 34788888888776653
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=207.12 Aligned_cols=227 Identities=12% Similarity=0.143 Sum_probs=174.1
Q ss_pred ccccCCCEEEEECChh-HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CC-CcEEEEEecCCCHHHHHHHHHHH
Q psy612 63 SYIKQGGTYLITGGTG-RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FN-NKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~g-GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g-~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
..+.+++++|||||+| |||+++++.|+++|++++++.++.+..++..+++++ .+ .++.++++|++++++++++++.+
T Consensus 12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 3455789999999985 999999999999998755444333444555556654 34 46889999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
.+.+|++|+||||||... ...+.+.+.++|++++++|+.|++.+.++++|.|+. ....+.||++||+.+..+.++..
T Consensus 92 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~g~iv~~ss~~~~~~~~~~~ 168 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRA--RGHGGVIVNNASVLGWRAQHGQA 168 (262)
T ss_pred HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEeCchhhcCCCCCCc
Confidence 999999999999999876 677889999999999999999999999999999753 22257899999999999989999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-ch-hhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NE-QTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++++|++.++.+.. ..++++.+|.+|.... .|.... .. ......+...+ +..++++..+.+..++.
T Consensus 169 ~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i~Pg~~~t-~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s 244 (262)
T PRK07831 169 HYAAAKAGVMALTRCSALEAA--EYGVRINAVAPSIAMH-PFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLAS 244 (262)
T ss_pred chHHHHHHHHHHHHHHHHHhC--ccCeEEEEEeeCCccC-cccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999999999999999987743 3456888888876643 332111 11 11111111122 34567888887777654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-21 Score=212.36 Aligned_cols=186 Identities=14% Similarity=0.185 Sum_probs=154.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..+++. .+.++.++++|++|.+++.++++.+.+.+|++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999876555443333344444442 24578899999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||.... ...+.+.+.++|++++++|+.|++++.+++.+.|.+ ...++||++||+++..+.++...|+++|
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~g~ii~isS~~~~~~~~~~~~Y~~sK 172 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIP---LKKGSIVSLCSVASAIGGLGPHAYTGSK 172 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh---cCCceEEEecChhhcccCCCCcccHHHH
Confidence 999999998641 245778899999999999999999999999998642 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++++.|++.++.+.. ..++++.+|.+|....
T Consensus 173 ~a~~~~~~~la~e~~--~~gi~v~~i~pg~v~t 203 (280)
T PLN02253 173 HAVLGLTRSVAAELG--KHGIRVNCVSPYAVPT 203 (280)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCcccc
Confidence 999999999887743 3346888888776643
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-21 Score=210.17 Aligned_cols=223 Identities=13% Similarity=0.112 Sum_probs=169.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||++++++|+++|+++++ +.|+... .+.+.. .+.++.++.+|++|++++.++++.+.+.+|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~-~~r~~~~---~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVG-TVRSEAA---RADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEE-EeCCHHH---HHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999987555 4554321 122222 3456888999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|++++++|+.|++++.++++|+|+ ....++||++||+++..+.++++.|+++|
T Consensus 79 ~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~---~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK 154 (277)
T PRK06180 79 IDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMR---ARRRGHIVNITSMGGLITMPGIGYYCGSK 154 (277)
T ss_pred CCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---ccCCCEEEEEecccccCCCCCcchhHHHH
Confidence 999999999876 67888999999999999999999999999999864 33467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccC----cccccccc--hhhhH--------HHHhcCCCCCCHHHHHHHHH
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN----SKFKIGNN--EQTDF--------YFKSSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~----~Gm~~~~~--~~~~~--------~~~~~g~~~l~~~~~~~~l~ 291 (1005)
++++.|++.++.+.. ..++++++|.||.+.. .+|..... ..... .....+....++++.++.+.
T Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 232 (277)
T PRK06180 155 FALEGISESLAKEVA--PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAIL 232 (277)
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 999999998876522 2345889999886532 11211000 00000 01123444567788888887
Q ss_pred HHHhccch
Q psy612 292 QLLIQDKI 299 (1005)
Q Consensus 292 ~~l~~~~~ 299 (1005)
.++..+.+
T Consensus 233 ~~l~~~~~ 240 (277)
T PRK06180 233 AAVESDEP 240 (277)
T ss_pred HHHcCCCC
Confidence 77765543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-21 Score=209.65 Aligned_cols=220 Identities=12% Similarity=0.060 Sum_probs=173.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-------~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
.+|++|||||++|||.++|++|+++|++++++.++.+. .++..++++..+.++.++.+|+++++++.++++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999999866555444332 23445566667788999999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--CC
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FG 217 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--~g 217 (1005)
.+.+|++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|++ ...+.||++||..+..+. ++
T Consensus 85 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~~~g~iv~iss~~~~~~~~~~~ 160 (273)
T PRK08278 85 VERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK---SENPHILTLSPPLNLDPKWFAP 160 (273)
T ss_pred HHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh---cCCCEEEEECCchhccccccCC
Confidence 999999999999999876 677888999999999999999999999999999753 345789999999888776 88
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
.+.|+++|++++.|++.++.+.. ..++++++|.++.+-++.+....... . ...-...++++..+.+..++...
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~Pg~~i~t~~~~~~~~~-~----~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 161 HTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALWPRTTIATAAVRNLLGG-D----EAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred cchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEeCCCccccHHHHhcccc-c----ccccccCCHHHHHHHHHHHhcCc
Confidence 89999999999999999988754 34568888877755444322111000 0 00112468889998888887654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.2e-21 Score=208.90 Aligned_cols=224 Identities=11% Similarity=0.076 Sum_probs=174.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCc-EEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNK-AIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~-v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++||||++|||++++++|+++|+++ ++++|+ +..++..++++..+.. +.++++|++|++++.++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~v-v~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAEL-FLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999874 455555 3344555666655544 4568999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++++|+.|++++.++++|.|.+ ....++||++||..+..+.+++..|+++|+
T Consensus 80 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 156 (272)
T PRK07832 80 DVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVA--AGRGGHLVNVSSAAGLVALPWHAAYSASKF 156 (272)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence 99999999876 667889999999999999999999999999999743 223579999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-------cchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++.+|++.++.+.. ..+++++.|.+|......+... ................+++++.++.+..++..+.
T Consensus 157 a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~ 233 (272)
T PRK07832 157 GLRGLSEVLRFDLA--RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNR 233 (272)
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence 99999998887643 3456888998877654332210 0000111111122246899999999999886543
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=205.38 Aligned_cols=222 Identities=17% Similarity=0.136 Sum_probs=174.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||.++|++|+++|+++ +++.|+. .++..+.+++.+.++.++.+|+++++++.++++++.+.++++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~v-i~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADI-VGAGRSE-PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE-EEEcCch-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999864 4445554 344556666667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++++|+.+++++.+++++.|++ ....+.||++||.++..+.++...|+++|+
T Consensus 82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 158 (248)
T TIGR01832 82 DILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLK--QGRGGKIINIASMLSFQGGIRVPSYTASKH 158 (248)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence 99999999876 667788899999999999999999999999998643 222578999999999988889999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++++|.+|.+.. .|..... .......+... -...++++..+.+..++..
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 229 (248)
T TIGR01832 159 GVAGLTKLLANEWA--AKGINVNAIAPGYMAT-NNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASS 229 (248)
T ss_pred HHHHHHHHHHHHhC--ccCcEEEEEEECcCcC-cchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999988743 3456888999887654 3322111 11111111111 2356788888888777753
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-21 Score=206.78 Aligned_cols=187 Identities=16% Similarity=0.119 Sum_probs=158.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|+++||||+||||++++++|+++|++++++.++.+..++..++++..+.++.++.+|++|++++.++++.+.+.++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999986555544434445566667777778999999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||... ..++.+.+.++|++++++|+.+++.+.+.+++.|++. ...++||++||..+..|.++++.|+++|+++
T Consensus 81 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 157 (254)
T TIGR02415 81 MVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQ--GHGGKIINAASIAGHEGNPILSAYSSTKFAV 157 (254)
T ss_pred EEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC--CCCeEEEEecchhhcCCCCCCcchHHHHHHH
Confidence 999999876 6788899999999999999999999999999987542 2347999999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+.|++.++.+.. ..++++.+|.+|.. +++|
T Consensus 158 ~~~~~~l~~~~~--~~~i~v~~v~Pg~i-~t~~ 187 (254)
T TIGR02415 158 RGLTQTAAQELA--PKGITVNAYCPGIV-KTPM 187 (254)
T ss_pred HHHHHHHHHHhc--ccCeEEEEEecCcc-cChh
Confidence 999998877743 33568888887754 4554
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-21 Score=207.41 Aligned_cols=222 Identities=17% Similarity=0.163 Sum_probs=172.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||++++++|+++|+++++ ..|+ +..++..+.++..|.++.++++|++|+++++++++.+.+.+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVIL-NGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999986554 4554 4445566667666778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|++++++|+.|++++.+++.+.|++ ...++||++||+.+..+.+++..|+++|
T Consensus 88 ~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~iss~~~~~~~~~~~~y~~sK 163 (255)
T PRK07523 88 IDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIA---RGAGKIINIASVQSALARPGIAPYTATK 163 (255)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---hCCeEEEEEccchhccCCCCCccHHHHH
Confidence 999999999876 678889999999999999999999999999998643 3467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.+++.++.+.. ..++++.+|.+|.... .|.... ........+...+ +...+++.+..+..++..
T Consensus 164 ~a~~~~~~~~a~e~~--~~gi~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 235 (255)
T PRK07523 164 GAVGNLTKGMATDWA--KHGLQCNAIAPGYFDT-PLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASD 235 (255)
T ss_pred HHHHHHHHHHHHHhh--HhCeEEEEEEECcccC-chhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998887643 2345888888775543 332111 1101111111111 234567777777776653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=205.48 Aligned_cols=223 Identities=12% Similarity=0.034 Sum_probs=176.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++++..|+. ..+++.++++..+.++.++.+|++|++++.++++++.+.+++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999998777666653 345566677777788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|+..+++|+.+++++.+++.++|++ .+.++||++||+.+..+.++...|+++|
T Consensus 83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~~~~~~~y~~sK 158 (250)
T PRK08063 83 LDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEK---VGGGKIISLSSLGSIRYLENYTTVGVSK 158 (250)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCeEEEEEcchhhccCCCCccHHHHHH
Confidence 999999999876 678889999999999999999999999999998643 3467899999999888888999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHHHH-h-cCCCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFK-S-SKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~-~-~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|+++++.+.. ..++++++|.+|.....+ ...... ....... . .....+++++..+.+..++..
T Consensus 159 ~a~~~~~~~~~~~~~--~~~i~v~~i~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 230 (250)
T PRK08063 159 AALEALTRYLAVELA--PKGIAVNAVSGGAVDTDA-LKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSP 230 (250)
T ss_pred HHHHHHHHHHHHHHh--HhCeEEEeEecCcccCch-hhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998876543 335588899988775432 211111 1100011 1 111357888888888777654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-21 Score=210.20 Aligned_cols=221 Identities=11% Similarity=0.047 Sum_probs=170.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
.++++|||||+||||+++|+.|+++|++++++ .|+.. ..+++... .+.++.+|++|.++++++++.+.+.+ |+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~-~r~~~---~~~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFAT-CRKEE---DVAALEAE--GLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-ECCHH---HHHHHHHC--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999865554 55432 12334333 36788999999999999999987766 68
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ...+.+.+.++|+.++++|+.|++.+.+.++|.|++ ...++||++||+++..+.++.+.|+++|
T Consensus 77 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK 152 (277)
T PRK05993 77 LDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK---QGQGRIVQCSSILGLVPMKYRGAYNASK 152 (277)
T ss_pred ccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh---cCCCEEEEECChhhcCCCCccchHHHHH
Confidence 999999999887 677888999999999999999999999999999643 3467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch------------hhhHH------HH---hcCCCCCCHH
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFY------FK---SSKQKVLHEN 284 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~------~~---~~g~~~l~~~ 284 (1005)
++++.|++.++.+.. ..++++++|.+|... +.|...... ....+ .. ......++++
T Consensus 153 ~a~~~~~~~l~~el~--~~gi~v~~v~Pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (277)
T PRK05993 153 FAIEGLSLTLRMELQ--GSGIHVSLIEPGPIE-TRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPE 229 (277)
T ss_pred HHHHHHHHHHHHHhh--hhCCEEEEEecCCcc-CchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHH
Confidence 999999999887643 445688899887664 333221100 00000 00 0112247889
Q ss_pred HHHHHHHHHHhccchh
Q psy612 285 DGLKLFEQLLIQDKIQ 300 (1005)
Q Consensus 285 ~~~~~l~~~l~~~~~~ 300 (1005)
++++.+.+++..+.+.
T Consensus 230 ~va~~i~~a~~~~~~~ 245 (277)
T PRK05993 230 AVYAVLLHALTAPRPR 245 (277)
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999988877653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=205.65 Aligned_cols=219 Identities=15% Similarity=0.157 Sum_probs=165.9
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++|++|||||+||||+++|++|+++|++++++..+.....+. .+..+.++.++++|+++.+++.++++++.+++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV---AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999998655553332222222 2233567889999999999999999999999999
Q ss_pred ccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|+||||||.... ..++.+.+.++|++++++|+.|++++.+++.|+|++ ..++||++||.++..+.+++..|+++
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~g~ii~~sS~~~~~~~~~~~~Y~~s 160 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA----HNGAIVNLASTRARQSEPDTEAYAAS 160 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH----cCcEEEEEcchhhcCCCCCCcchHHH
Confidence 9999999998642 256788899999999999999999999999998743 24789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHHH--HhcCCCCCCHHHHHHHHHHHHh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYF--KSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~--~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
|++++.|++.++.+.. .++++.+|.+|.... .|..... ....... +...-+..++++....+..++.
T Consensus 161 Kaa~~~~~~~la~~~~---~~i~v~~i~Pg~i~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 230 (255)
T PRK05717 161 KGGLLALTHALAISLG---PEIRVNAVSPGWIDA-RDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS 230 (255)
T ss_pred HHHHHHHHHHHHHHhc---CCCEEEEEecccCcC-CccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999999887642 236888898776543 3322110 0000000 1111234567777777766654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=207.93 Aligned_cols=219 Identities=12% Similarity=0.096 Sum_probs=164.2
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++||||| ++|||+++|+.|+++|+++++ .+|+.. .+..+++. +.+.++.+++||++|+++++++++++.+++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l-~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVL-TGFGRA-LRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEE-ecCccc-hhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999 899999999999999986544 544321 11222222 224467789999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||++|||||+... ..++.+.+.++|++++++|+.|++++++.++|+|+ +.+.||++||. +..+.++++.
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~-----~~g~Iv~is~~-~~~~~~~~~~ 157 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN-----EGGSIVGLDFD-ATVAWPAYDW 157 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc-----cCceEEEEeec-ccccCCccch
Confidence 999999999998641 13577889999999999999999999999999964 23689999875 4566788889
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC--CCCCHHHHHHHHHHHHh
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ--KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~--~~l~~~~~~~~l~~~l~ 295 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|..... .......+...+ ...++++..+.+..++.
T Consensus 158 Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s 234 (256)
T PRK07889 158 MGVAKAALESTNRYLARDLG--PRGIRVNLVAAGPIRT-LAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLS 234 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhh--hcCeEEEeeccCcccC-hhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence 99999999999999988754 4456889998887754 4432111 111111122222 24688999988888775
Q ss_pred c
Q psy612 296 Q 296 (1005)
Q Consensus 296 ~ 296 (1005)
.
T Consensus 235 ~ 235 (256)
T PRK07889 235 D 235 (256)
T ss_pred c
Confidence 4
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.1e-21 Score=206.96 Aligned_cols=187 Identities=11% Similarity=0.114 Sum_probs=158.3
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
-++++++||||++|||+++|++|+++|++++++.++.+..++..+++...+.++.++.+|++|+++++++++++.+++|+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 36799999999999999999999999996555544434445566666666778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||......++.+.+.++|++++++|+.|++.+.+++.+.|++ ..++||++||+.+..+.+++..|+++|
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~ii~~sS~~~~~~~~~~~~Y~~sK 158 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE----SGGSIVMINSMVLRHSQPKYGAYKMAK 158 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh----CCCEEEEEechhhccCCCCcchhHHHH
Confidence 9999999998652467788899999999999999999999999998643 236899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++++.+++.++.+.. ..++++++|.+|...+
T Consensus 159 ~a~~~l~~~~a~~~~--~~~i~v~~v~pg~v~~ 189 (258)
T PRK07890 159 GALLAASQSLATELG--PQGIRVNSVAPGYIWG 189 (258)
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEeCCccCc
Confidence 999999999887633 3346888898887644
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=203.30 Aligned_cols=189 Identities=13% Similarity=0.171 Sum_probs=156.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++||||||+||||.+++++|+++|+.+++...|++ ..++..+.++..+.++.++.||++|.+++.++++++.+.+|++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999987655544443 2344555566667778899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaan 225 (1005)
|+||||||.......+.+.+.++|++++++|+.|++++.+++++.|++......++||++||.++..+.++. ..|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 999999998753456788899999999999999999999999998753222235789999999999988874 6899999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++++.|++.++.+.. ..++++++|.++.+.+
T Consensus 162 aa~~~~~~~la~~~~--~~~i~v~~i~pg~v~~ 192 (248)
T PRK06123 162 GAIDTMTIGLAKEVA--AEGIRVNAVRPGVIYT 192 (248)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEecCcccC
Confidence 999999998877642 3456899999887754
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=205.61 Aligned_cols=219 Identities=12% Similarity=0.084 Sum_probs=169.3
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCC------------CchHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~------------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v 132 (1005)
.+|++|||||++ |||.++|++|+++|+.++++ .|+ .....+.+.++..+.++.++.+|+++.+++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFT-YWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEE-cCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 468999999994 99999999999999865554 444 111123445555677899999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy612 133 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 212 (1005)
Q Consensus 133 ~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~ 212 (1005)
.++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++.+++.+.|. ....++||++||..+.
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~iv~~ss~~~~ 158 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD---GKAGGRIINLTSGQSL 158 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh---hcCCeEEEEECCcccc
Confidence 9999999999999999999999876 67788899999999999999999999999998863 3345789999999998
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHH-hcCCCCCCHHHHHHHHH
Q psy612 213 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 213 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g~~~l~~~~~~~~l~ 291 (1005)
.+.+++..|+++|++++.|++.++.+.. ..++++++|.||.+....+. .. ....... .......++++..+.+.
T Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i~Pg~~~t~~~~-~~--~~~~~~~~~~~~~~~~~~~~a~~~~ 233 (256)
T PRK12748 159 GPMPDELAYAATKGAIEAFTKSLAPELA--EKGITVNAVNPGPTDTGWIT-EE--LKHHLVPKFPQGRVGEPVDAARLIA 233 (256)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHH--HhCeEEEEEEeCcccCCCCC-hh--HHHhhhccCCCCCCcCHHHHHHHHH
Confidence 8888999999999999999998877642 34569999999987543221 11 1011111 11122346778877777
Q ss_pred HHHh
Q psy612 292 QLLI 295 (1005)
Q Consensus 292 ~~l~ 295 (1005)
.++.
T Consensus 234 ~l~~ 237 (256)
T PRK12748 234 FLVS 237 (256)
T ss_pred HHhC
Confidence 6654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=203.61 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=172.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++++||||+||||+.+|++|+++|++++++.++++ ..++..+++...+.++.++.+|+++.+++.++++++.+.+++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999997766655543 234556667667788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.|+ ..++||++||.++..+.+++..|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~~~~Y~~sK 157 (245)
T PRK12937 84 IDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLG-----QGGRIINLSTSVIALPLPGYGPYAASK 157 (245)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhc-----cCcEEEEEeeccccCCCCCCchhHHHH
Confidence 999999999876 67788889999999999999999999999988753 246899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..+++++.|.+|.. .+.|.... ........+...+ ...++++....+..++..
T Consensus 158 ~a~~~~~~~~a~~~~--~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 228 (245)
T PRK12937 158 AAVEGLVHVLANELR--GRGITVNAVAPGPV-ATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP 228 (245)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEEeCCc-cCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 999999998877632 33457777776554 44553211 1111111122222 234778888887777643
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=206.32 Aligned_cols=184 Identities=18% Similarity=0.150 Sum_probs=153.8
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++|||||++|||+++|+.|+++|+++++ ..|+ +..++..+++++.+ ++.++++|++|+++++++++++.+++|+||+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVI-SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899999999999999999999986544 4554 44455566665544 6888999999999999999999999999999
Q ss_pred EEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 149 VLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 149 vIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
||||||.... ...+.+.+.++|.+.+.+|+.+++.+.+.++|.|. .+...++||++||.++..+.++...|+++|++
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~--~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa 157 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWL--EKKMKGVLVYLSSVSVKEPMPPLVLADVTRAG 157 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHH--hcCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence 9999997531 34577889999999999999999999999998863 23346899999999999888999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
+.+|++.++.+.. ..++++.+|.+|.....
T Consensus 158 ~~~~~~~la~e~~--~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 158 LVQLAKGVSRTYG--GKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHHHHHHhC--CCCEEEEEeccCcccCc
Confidence 9999999998754 45578889987766443
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=204.98 Aligned_cols=218 Identities=16% Similarity=0.198 Sum_probs=167.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|+++||||++|||+++|+.|+++|++++++.++++ +..++++.. .+.++.+|++|+++++++++++.+.+|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999997766655543 223344433 36789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~g~~~Yaaan 225 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++ .+.++||++||.++.. +.++.+.|+++|
T Consensus 81 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~---~~~g~iv~isS~~~~~~~~~~~~~Y~asK 156 (255)
T PRK06463 81 DVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL---SKNGAIVNIASNAGIGTAAEGTTFYAITK 156 (255)
T ss_pred CEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh---cCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence 99999999876 677888999999999999999999999999998643 3467899999998874 456888999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chh---h-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ---T-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~---~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.. ++.|.... ... . ........+ ...++++..+.+..++..
T Consensus 157 aa~~~~~~~la~e~~--~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 231 (255)
T PRK06463 157 AGIIILTRRLAFELG--KYGIRVNAVAPGWV-ETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASD 231 (255)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCCC-CCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcCh
Confidence 999999999987643 34568888877655 55554221 110 0 011111222 235788888888777653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=206.09 Aligned_cols=222 Identities=16% Similarity=0.198 Sum_probs=171.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||+++|++|+++|++++++. |+....+..+++++.+.++.++.+|+++++++.++++++.+.+|++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEc-CChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999766654 4433335666777778889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+ ++|++++++|+.+++++.+.+.|.|++ ..++||++||..+..+.++...|+++|+
T Consensus 85 d~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 85 DGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKA----SRGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred CEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhc----cCcEEEEECCHHhccCCCCCchhHHHHH
Confidence 99999999765 44455545 999999999999999999999998642 2478999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccc-----ccch-hhhHHHHhcC--CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-----GNNE-QTDFYFKSSK--QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-----~~~~-~~~~~~~~~g--~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|...+..... .... ......+... ....++++..+.+..++...
T Consensus 159 a~~~~~~~l~~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (258)
T PRK08628 159 AQLALTREWAVALA--KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER 235 (258)
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChh
Confidence 99999999887643 345688899888764432110 0000 0011111111 23567888888888877643
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=205.52 Aligned_cols=226 Identities=15% Similarity=0.133 Sum_probs=176.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++|||||+||||++++++|+++|++++++ .|+ ...+++.+.+...+.++.++.+|++|++++.++++.+.++++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLA-ARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999865544 554 34455566676667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccC-CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEA-NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~-t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||... ...+.+. +.++|++.+++|+.|++++.+.+.++|++ ..++||++||..+..+.+++..|+++|
T Consensus 80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~Y~~sK 154 (263)
T PRK06181 80 DILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA----SRGQIVVVSSLAGLTGVPTRSGYAASK 154 (263)
T ss_pred CEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh----cCCEEEEEecccccCCCCCccHHHHHH
Confidence 99999999877 6677787 89999999999999999999999988643 347899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcC---CCCCCHHHHHHHHHHHHhccchhhh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK---QKVLHENDGLKLFEQLLIQDKIQYL 302 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g---~~~l~~~~~~~~l~~~l~~~~~~~~ 302 (1005)
++++.+++.++.+.. ..++++++|.+|.+.. .|...............+ ...+++++..+.+..++..+...++
T Consensus 155 ~~~~~~~~~l~~~~~--~~~i~~~~i~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~~~~ 231 (263)
T PRK06181 155 HALHGFFDSLRIELA--DDGVAVTVVCPGFVAT-DIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARRKRLLV 231 (263)
T ss_pred HHHHHHHHHHHHHhh--hcCceEEEEecCcccc-CcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCCCCEEe
Confidence 999999998876532 3456888998876643 332111000000000011 1468999999999999976554443
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=205.67 Aligned_cols=187 Identities=19% Similarity=0.176 Sum_probs=158.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||++|||++++++|+++|++ |++++|+....+..+++...+.++.++.||+++++++.++++++.+.++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999986 555566654445555666567788899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~-~~g~~g~~~Yaaan 225 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++.+.+.+.++|++ ...++||++||+++ ..+.+++..|+++|
T Consensus 84 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~~Y~~sK 159 (263)
T PRK08226 84 DILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIA---RKDGRIVMMSSVTGDMVADPGETAYALTK 159 (263)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence 99999999876 677888999999999999999999999999998643 34568999999887 46778899999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++.+|++.++.+.. ..++++.+|.+|.. ++.|
T Consensus 160 ~a~~~~~~~la~~~~--~~~i~v~~i~pg~v-~t~~ 192 (263)
T PRK08226 160 AAIVGLTKSLAVEYA--QSGIRVNAICPGYV-RTPM 192 (263)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEecCcc-cCHH
Confidence 999999999887743 34568999998866 4444
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-21 Score=208.65 Aligned_cols=176 Identities=16% Similarity=0.217 Sum_probs=151.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|++|+++|++++++ +|+... ..++.+++||++|+++++++++++.+++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~-~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINF-DIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEE-eCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865554 554321 1257889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+++..+.++++.|+++|+
T Consensus 74 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 149 (258)
T PRK06398 74 DILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK---QDKGVIINIASVQSFAVTRNAAAYVTSKH 149 (258)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence 99999999876 678889999999999999999999999999999753 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++.|++.++.+.. . .+++.+|.+|.. ++.|
T Consensus 150 al~~~~~~la~e~~--~-~i~vn~i~PG~v-~T~~ 180 (258)
T PRK06398 150 AVLGLTRSIAVDYA--P-TIRCVAVCPGSI-RTPL 180 (258)
T ss_pred HHHHHHHHHHHHhC--C-CCEEEEEecCCc-cchH
Confidence 99999999988743 2 278888987755 4443
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=203.11 Aligned_cols=228 Identities=13% Similarity=0.097 Sum_probs=173.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.|++|||||++|||..++++|+++|++++++.+|+. ..++..++++..+.++.+++||+++.++++++++++.+.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999988766666653 3344556666667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-ChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-~~~Yaaan 225 (1005)
|+||||||.......+.+.+.++|+.++++|+.|++++.+.+++.|......+.++||++||.++..|.++ ...|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 99999999865345678889999999999999999999999888865322223578999999999988775 57899999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++++|.+|.+....+... ............. -...++++..+.+..++...
T Consensus 162 ~~~~~~~~~la~~~~--~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~ 233 (248)
T PRK06947 162 GAVDTLTLGLAKELG--PHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDA 233 (248)
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999998887632 3456899999987754322111 1111111111111 12467888888888776543
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-20 Score=203.86 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=166.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+++++||||+||||+++++.|+++|+++++ ..|+... +.. ...+.++++|++|+++++++++.+.+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~-~~r~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFG-TSRNPAR------AAP-IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEE-EeCChhh------ccc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999987554 4554211 111 2357889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.++|+|++ ...++||++||+++..+.++.+.|+++|+
T Consensus 75 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 150 (270)
T PRK06179 75 DVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRA---QGSGRIINISSVLGFLPAPYMALYAASKH 150 (270)
T ss_pred CEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCceEEEECCccccCCCCCccHHHHHHH
Confidence 99999999987 677888999999999999999999999999999643 45688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh---hh----------HHHHhcCCCCCCHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TD----------FYFKSSKQKVLHENDGLKLFEQL 293 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~----------~~~~~~g~~~l~~~~~~~~l~~~ 293 (1005)
+++.|++.++.+.. ..++++++|.+|... +.|....... .. ......-....++++..+.+..+
T Consensus 151 a~~~~~~~l~~el~--~~gi~v~~v~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 227 (270)
T PRK06179 151 AVEGYSESLDHEVR--QFGIRVSLVEPAYTK-TNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKA 227 (270)
T ss_pred HHHHHHHHHHHHHh--hhCcEEEEEeCCCcc-cccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 99999998877632 345588888766543 3433211100 00 00011112245677787777777
Q ss_pred Hhccc
Q psy612 294 LIQDK 298 (1005)
Q Consensus 294 l~~~~ 298 (1005)
+..+.
T Consensus 228 ~~~~~ 232 (270)
T PRK06179 228 ALGPW 232 (270)
T ss_pred HcCCC
Confidence 76554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-20 Score=217.64 Aligned_cols=220 Identities=15% Similarity=0.095 Sum_probs=166.3
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++||||||+||||++++++|+++|++++++. ++...++..+..++.+ ..++.+|++|+++++++++.+.+.+|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~-~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLD-VPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEe-CCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999998766554 4332233322223333 357889999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. +..+.+++.++|+.++++|+.|++++++++.+.+. + .+.++||++||+++..|.+++.+|+++|
T Consensus 285 id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~--~~~g~iv~~SS~~~~~g~~~~~~Y~asK 360 (450)
T PRK08261 285 LDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-L--GDGGRIVGVSSISGIAGNRGQTNYAASK 360 (450)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-h--cCCCEEEEECChhhcCCCCCChHHHHHH
Confidence 999999999987 78889999999999999999999999999988642 1 2458999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHh-cCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|++.++.+.. ..++++.+|.||.+. +.|............+. ..+ ..-.+++..+.+..++.
T Consensus 361 aal~~~~~~la~el~--~~gi~v~~v~PG~i~-t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 361 AGVIGLVQALAPLLA--ERGITINAVAPGFIE-TQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLAS 429 (450)
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEEeCcCc-chhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhC
Confidence 988888887766532 345589999999875 45543211111111110 111 12356777777776654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=205.60 Aligned_cols=223 Identities=11% Similarity=0.147 Sum_probs=176.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||.+++++|+++|++++++.++.+..++...++ ..+.++.++.+|++|++++.++++.+.+ ++++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCCC
Confidence 4689999999999999999999999987555544434444455555 3466889999999999999999999876 8999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.+++++++++|+.|++++.+.+.++|++ .+.++||++||+.+..|.++...|+++|+
T Consensus 82 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 157 (263)
T PRK09072 82 NVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRA---QPSAMVVNVGSTFGSIGYPGYASYCASKF 157 (263)
T ss_pred CEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence 99999999876 677888999999999999999999999999998643 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
++..|++.++.+.. ..++++++|.+|.. ++.|..... .......+....++++.+..+..++..+....
T Consensus 158 a~~~~~~~l~~~~~--~~~i~v~~v~Pg~~-~t~~~~~~~---~~~~~~~~~~~~~~~~va~~i~~~~~~~~~~~ 226 (263)
T PRK09072 158 ALRGFSEALRRELA--DTGVRVLYLAPRAT-RTAMNSEAV---QALNRALGNAMDDPEDVAAAVLQAIEKERAER 226 (263)
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEecCcc-cccchhhhc---ccccccccCCCCCHHHHHHHHHHHHhCCCCEE
Confidence 99999999887743 34568888887655 344432111 11111223346789999999999998775543
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=206.84 Aligned_cols=224 Identities=17% Similarity=0.192 Sum_probs=172.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|+++||||++|||+++++.|+++|++++++.++.+..+++.++++..+.++.++++|++|++++.++++++.+++|++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999965554443344556666676667789999999999999999999999999999
Q ss_pred cEEEEcCcccCc--------------cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy612 147 DGVLHIAGISGL--------------TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 212 (1005)
Q Consensus 147 dgvIh~AG~~~~--------------~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~ 212 (1005)
|+||||||...+ ..++.+.+.++|++++++|+.+++++.++++|.|++ .+.+.||++||+++.
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~ii~isS~~~~ 165 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVG---RKGGNIINISSMNAF 165 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEccchhc
Confidence 999999996531 134678899999999999999999999999998643 345789999999999
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc----cc----hhhhHHHHhcCC-CCCCH
Q psy612 213 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NN----EQTDFYFKSSKQ-KVLHE 283 (1005)
Q Consensus 213 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~----~~~~~~~~~~g~-~~l~~ 283 (1005)
.+.++...|+++|++++.|++.++.+.. ..++++.+|.+|.... .|... .. ...........+ +..++
T Consensus 166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~girvn~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 242 (278)
T PRK08277 166 TPLTKVPAYSAAKAAISNFTQWLAVHFA--KVGIRVNAIAPGFFLT-EQNRALLFNEDGSLTERANKILAHTPMGRFGKP 242 (278)
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEEeccCcC-cchhhhhccccccchhHHHHHhccCCccCCCCH
Confidence 9999999999999999999999988754 3456888888776643 33211 00 000111111112 23467
Q ss_pred HHHHHHHHHHHhc
Q psy612 284 NDGLKLFEQLLIQ 296 (1005)
Q Consensus 284 ~~~~~~l~~~l~~ 296 (1005)
+|..+.+..++..
T Consensus 243 ~dva~~~~~l~s~ 255 (278)
T PRK08277 243 EELLGTLLWLADE 255 (278)
T ss_pred HHHHHHHHHHcCc
Confidence 8888887776554
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-21 Score=187.90 Aligned_cols=183 Identities=18% Similarity=0.209 Sum_probs=154.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+.++|||||++|||+++|+.|.+.|..+| +++|++ +..++.++.-..++...|||.|.++.+++++++.++|+.+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VI-i~gR~e---~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVI-ICGRNE---ERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEE-EecCcH---HHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 467999999999999999999999987654 555553 2333444444567889999999999999999999999999
Q ss_pred cEEEEcCcccCccchh--ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNI--LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~--~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++||||||+.. .-.+ .+-..++.++.+++|+.+++.|+++++|++. +++...||++||..++.+......||++
T Consensus 80 NvliNNAGIqr-~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~---~q~~a~IInVSSGLafvPm~~~PvYcaT 155 (245)
T COG3967 80 NVLINNAGIQR-NEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLL---RQPEATIINVSSGLAFVPMASTPVYCAT 155 (245)
T ss_pred heeeecccccc-hhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHH---hCCCceEEEeccccccCcccccccchhh
Confidence 99999999987 3333 3446778899999999999999999999964 3567889999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
|+++.+|+..+|.+.. ..++.++-+.+|....+
T Consensus 156 KAaiHsyt~aLR~Qlk--~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 156 KAAIHSYTLALREQLK--DTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHHhh--hcceEEEEecCCceecC
Confidence 9999999999998843 55678999998888764
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=203.07 Aligned_cols=184 Identities=10% Similarity=0.128 Sum_probs=155.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+|+||..++++|+++|++++++.++.+...+..+.+. .+.++.+++||++|+++++++++++.++++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865544444333344444454 46678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++++|+.+++++.+.+++.|++ .+.++||++||+.+..+.+++..|+++|+
T Consensus 83 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 158 (252)
T PRK06138 83 DVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR---QGGGSIVNTASQLALAGGRGRAAYVASKG 158 (252)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh---cCCeEEEEECChhhccCCCCccHHHHHHH
Confidence 99999999876 677888899999999999999999999999998643 35678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+++.|++.++.+.. ..++++++|.+|...
T Consensus 159 a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~ 187 (252)
T PRK06138 159 AIASLTRAMALDHA--TDGIRVNAVAPGTID 187 (252)
T ss_pred HHHHHHHHHHHHHH--hcCeEEEEEEECCcc
Confidence 99999999877643 234588888877653
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=201.14 Aligned_cols=216 Identities=16% Similarity=0.088 Sum_probs=164.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.|++|||||++|||+++|++|+++|++++++ .|+.. +..+.++..+ +.++.+|++|+++++++++++.+.+|++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~-~r~~~--~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVS-YRTHY--PAIDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCch--hHHHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 5789999999999999999999999966555 44432 2234454444 56789999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
++|||||... .....+.+.++|++++++|+.+++.+.+.++|.|++.. ...+.||++||.++..+.+++..|+++|++
T Consensus 77 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~-~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa 154 (236)
T PRK06483 77 AIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG-HAASDIIHITDYVVEKGSDKHIAYAASKAA 154 (236)
T ss_pred EEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC-CCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence 9999999865 44556778999999999999999999999999875321 124789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++|++.++.+.. . ++++.+|.+|.... +... .............+ +...+++..+.+..++.
T Consensus 155 l~~l~~~~a~e~~--~-~irvn~v~Pg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 155 LDNMTLSFAAKLA--P-EVKVNSIAPALILF-NEGD-DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHHHHHHC--C-CcEEEEEccCceec-CCCC-CHHHHHHHhccCccccCCCHHHHHHHHHHHhc
Confidence 9999999988753 2 37888888886532 1111 11111111111112 23468888888888774
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=203.79 Aligned_cols=189 Identities=13% Similarity=0.120 Sum_probs=156.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-C-CcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-N-NKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+|++|||||+|+||++++++|+++|++++++.++....++..+++... + .++.++.||+++.+++.++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999986554443333344555555443 3 47899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.++|++.+++|+.|++++.+++.+.|++ ....++||++||.++..|.++...|+++|
T Consensus 82 id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 158 (259)
T PRK12384 82 VDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIR--DGIQGRIIQINSKSGKVGSKHNSGYSAAK 158 (259)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--CCCCcEEEEecCcccccCCCCCchhHHHH
Confidence 999999999877 677888999999999999999999999999998643 22247899999999999989999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
++++.+++.++.+.. ..++++.+|.+|.+.+++|
T Consensus 159 aa~~~l~~~la~e~~--~~gi~v~~v~pg~~~~~~~ 192 (259)
T PRK12384 159 FGGVGLTQSLALDLA--EYGITVHSLMLGNLLKSPM 192 (259)
T ss_pred HHHHHHHHHHHHHHH--HcCcEEEEEecCCcccchh
Confidence 999999988876532 3456999999987755554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=201.31 Aligned_cols=218 Identities=13% Similarity=0.171 Sum_probs=165.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|+. |++..|+ +..++.. ...+.++.++.+|+++.+++.++++++.+.+++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAI-VGLHGTRVEKLEALA---AELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHH---HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999984 4444444 2222222 233567888999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.++|++++++|+.+++++.+++.+.+++ .+.++||++||.++..+.++...|+++|
T Consensus 81 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sk 156 (245)
T PRK12936 81 VDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMR---RRYGRIINITSVVGVTGNPGQANYCASK 156 (245)
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHH---hCCCEEEEECCHHhCcCCCCCcchHHHH
Confidence 999999999876 677888899999999999999999999999887542 3467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH-HHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++..|++.++.+.. ..++++++|.||.|.. .|.......... ....... ....+++..+.+..++.
T Consensus 157 ~a~~~~~~~la~~~~--~~~i~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~ 225 (245)
T PRK12936 157 AGMIGFSKSLAQEIA--TRNVTVNCVAPGFIES-AMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLAS 225 (245)
T ss_pred HHHHHHHHHHHHHhh--HhCeEEEEEEECcCcC-chhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC
Confidence 999999988877633 3346889999887743 333211111111 1111111 12356777777766553
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-20 Score=204.30 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=175.4
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+.|+++||||+||||++++++|+++|++++++.++.+...+....+...+.++.++.+|+++++++.++++++.+.+++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 35689999999999999999999999987655555444444555556666778889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.++|++.+++|+.|++++.+.+++.|++ ...++||++||..+..+.++.+.|+++|
T Consensus 88 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (274)
T PRK07775 88 IEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIE---RRRGDLIFVGSDVALRQRPHMGAYGAAK 163 (274)
T ss_pred CCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCceEEEECChHhcCCCCCcchHHHHH
Confidence 999999999876 667778899999999999999999999999998643 3457899999999998889999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chhhhHH---HHh----cCCCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFY---FKS----SKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~---~~~----~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++++|.+|++. +++.... ....... ... .....+.+++..+.+..++..+
T Consensus 164 ~a~~~l~~~~~~~~~--~~gi~v~~v~pG~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~ 240 (274)
T PRK07775 164 AGLEAMVTNLQMELE--GTGVRASIVHPGPTL-TGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP 240 (274)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeCCccc-CcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence 999999998887632 235688999988764 3332111 1100000 111 0123578899999988887654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=207.20 Aligned_cols=181 Identities=18% Similarity=0.271 Sum_probs=153.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++..+..... ..++.++.+|++|+++++++++++.+.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI 78 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999997666654433211 2367889999999999999999999999999
Q ss_pred cEEEEcCcccCccc---------hhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 147 DGVLHIAGISGLTS---------NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 147 dgvIh~AG~~~~~~---------~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
|+||||||... .. .+.+.+.++|++++++|+.|++++.+++.++|++ .+.++||++||+++..+.++
T Consensus 79 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~ 154 (266)
T PRK06171 79 DGLVNNAGINI-PRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVK---QHDGVIVNMSSEAGLEGSEG 154 (266)
T ss_pred CEEEECCcccC-CccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHh---cCCcEEEEEccccccCCCCC
Confidence 99999999754 22 2346789999999999999999999999998643 34578999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
+..|+++|+++++|++.++.+.. ..++++.+|.+|.+..++|.
T Consensus 155 ~~~Y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~~~~t~~~ 197 (266)
T PRK06171 155 QSCYAATKAALNSFTRSWAKELG--KHNIRVVGVAPGILEATGLR 197 (266)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeccccccCCCc
Confidence 99999999999999999887743 45679999999988656653
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-20 Score=203.48 Aligned_cols=227 Identities=16% Similarity=0.176 Sum_probs=174.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||+||||+++++.|+++|++++++.++.+..++..+.+... +.++.++.+|++|++++++ ++++.+.+|
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 3678999999999999999999999987655544444444454555443 3578899999999999999 999989999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ...+.+.+.++|++.+++|+.|++++.+.++|+|++ ...+.||++||.++..|.+++..|+++
T Consensus 81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~vsS~~~~~~~~~~~~Y~~s 156 (280)
T PRK06914 81 RIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK---QKSGKIINISSISGRVGFPGLSPYVSS 156 (280)
T ss_pred CeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEECcccccCCCCCCchhHHh
Confidence 9999999999877 677788899999999999999999999999998643 345789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-------c--hhh----hHHHH---hcCCCCCCHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------N--EQT----DFYFK---SSKQKVLHENDGLK 288 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~--~~~----~~~~~---~~g~~~l~~~~~~~ 288 (1005)
|++++.|++.++.+.. ..+++++.+.+|.+....+.... . ... ..... .......++++..+
T Consensus 157 K~~~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 234 (280)
T PRK06914 157 KYALEGFSESLRLELK--PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVAN 234 (280)
T ss_pred HHHHHHHHHHHHHHhh--hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHH
Confidence 9999999998876533 33568888988776543222100 0 000 00000 11123578899999
Q ss_pred HHHHHHhccchh
Q psy612 289 LFEQLLIQDKIQ 300 (1005)
Q Consensus 289 ~l~~~l~~~~~~ 300 (1005)
.+..++..+...
T Consensus 235 ~~~~~~~~~~~~ 246 (280)
T PRK06914 235 LIVEIAESKRPK 246 (280)
T ss_pred HHHHHHcCCCCC
Confidence 999988877554
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=210.23 Aligned_cols=213 Identities=16% Similarity=0.105 Sum_probs=162.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++. +.++.++.+|+++ ++.+.++++.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence 4789999999999999999999999997555544444556666677653 3578889999995 23333444444444
Q ss_pred --CccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CCCCCh
Q psy612 145 --PIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSC 219 (1005)
Q Consensus 145 --~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~--g~~g~~ 219 (1005)
++|++|||||+... ...+.+.+.++|++++++|+.|+++++++++|.|++ ++.++||++||.++.. +.++++
T Consensus 130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~~~g~IV~iSS~a~~~~~~~p~~~ 206 (320)
T PLN02780 130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLK---RKKGAIINIGSGAAIVIPSDPLYA 206 (320)
T ss_pred CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHh---cCCcEEEEEechhhccCCCCccch
Confidence 56799999998642 246788999999999999999999999999999743 3568899999999975 358899
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
.|+++|+++++|++.++.+.. ..++++.+|.+|.. ++.|.... ...+..+++++.++.+...+..
T Consensus 207 ~Y~aSKaal~~~~~~L~~El~--~~gI~V~~v~PG~v-~T~~~~~~---------~~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 207 VYAATKAYIDQFSRCLYVEYK--KSGIDVQCQVPLYV-ATKMASIR---------RSSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--ccCeEEEEEeeCce-ecCccccc---------CCCCCCCCHHHHHHHHHHHhCC
Confidence 999999999999999988753 45568889988776 45553211 1123357899988888888754
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=204.60 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=154.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++++.|+++|+++ ++++|++...+..+++...+.++.++.+|++|.+++.++++++.+.++++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARV-VLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEE-EEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865 45566554455666676667788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||......++.+.+.++|++.+++|+.+++++.+.++|.|++ .+.++||++||+++. ..+...|+++|+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~~sS~~~~--~~~~~~Y~~sK~ 160 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA---QGGGAIVNVSSIATR--GINRVPYSAAKG 160 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCeEEEEcCcccc--CCCCCccHHHHH
Confidence 999999996532467888999999999999999999999999999753 345789999998764 345678999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+++.|++.++.+.. ..++++++|.+|....
T Consensus 161 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t 190 (260)
T PRK12823 161 GVNALTASLAFEYA--EHGIRVNAVAPGGTEA 190 (260)
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEecCccCC
Confidence 99999999887743 3456889999886643
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-20 Score=203.93 Aligned_cols=219 Identities=13% Similarity=0.075 Sum_probs=168.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++++||||+||||+++++.|+++|++++++ .|+.. ..+++... .+.++.+|++|+++++++++++.+.++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~-~r~~~---~l~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGA-ARRVD---KMEDLASL--GVHPLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCHH---HHHHHHhC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999865555 44431 12233332 37789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|+.++++|+.|++.+.+.++|.|++ ...+.||++||..+..+.++...|+++|+
T Consensus 76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 151 (273)
T PRK06182 76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA---QRSGRIINISSMGGKIYTPLGAWYHATKF 151 (273)
T ss_pred CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh---cCCCEEEEEcchhhcCCCCCccHhHHHHH
Confidence 99999999976 778889999999999999999999999999999753 34578999999999888888899999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-------------h----hhHHHHhcC-CCCCCHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-------------Q----TDFYFKSSK-QKVLHENDGLK 288 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-------------~----~~~~~~~~g-~~~l~~~~~~~ 288 (1005)
++++|++.++.+.. ..++++++|.+|... +.|...... . ......... ....++++..+
T Consensus 152 a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~ 228 (273)
T PRK06182 152 ALEGFSDALRLEVA--PFGIDVVVIEPGGIK-TEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIAD 228 (273)
T ss_pred HHHHHHHHHHHHhc--ccCCEEEEEecCCcc-cccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHH
Confidence 99999998877633 345688888887664 444210000 0 000111111 13458888888
Q ss_pred HHHHHHhccc
Q psy612 289 LFEQLLIQDK 298 (1005)
Q Consensus 289 ~l~~~l~~~~ 298 (1005)
.+..++....
T Consensus 229 ~i~~~~~~~~ 238 (273)
T PRK06182 229 AISKAVTARR 238 (273)
T ss_pred HHHHHHhCCC
Confidence 8888887543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=200.48 Aligned_cols=219 Identities=18% Similarity=0.195 Sum_probs=175.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++||||+||||+.++++|+++|+. |+++.|+ +..++..++++..+.++.++.+|+++++++.++++++.+.+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVN-VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999985 5555565 3444555666666778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.++|++.+++|+.|++++.+++.++|.+ ...+++|++||..+..+.++...|+++|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 160 (239)
T PRK07666 85 IDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIE---RQSGDIINISSTAGQKGAAVTSAYSASK 160 (239)
T ss_pred ccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCcEEEEEcchhhccCCCCCcchHHHH
Confidence 999999999876 567778899999999999999999999999998643 3467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++++.+++.++.+.. ..+++++.|.+|...+ +|...... ........+++++..+.+.+++..+.
T Consensus 161 ~a~~~~~~~~a~e~~--~~gi~v~~v~pg~v~t-~~~~~~~~-----~~~~~~~~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 161 FGVLGLTESLMQEVR--KHNIRVTALTPSTVAT-DMAVDLGL-----TDGNPDKVMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEecCcccC-cchhhccc-----cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999988876643 3356888888776543 33221110 01112345789999999999887764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-20 Score=203.23 Aligned_cols=182 Identities=14% Similarity=0.096 Sum_probs=153.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||++++++|+++|+++ ++++|+ +..++..++++.. +.++.++.+|++|++++.++++. +|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHL-HLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AG 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hC
Confidence 47999999999999999999999999954 444554 4444555556543 56788999999999999888753 58
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|++|||||+.. ..++.+.+.++|++++++|+.|.+++.+++.|.|++ .+.+.||++||..+..+.+++..|+++
T Consensus 81 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~iss~~~~~~~~~~~~y~as 156 (259)
T PRK06125 81 DIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKA---RGSGVIVNVIGAAGENPDADYICGSAG 156 (259)
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEecCccccCCCCCchHhHHH
Confidence 9999999999876 678899999999999999999999999999999753 334689999999998888899999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
|+++.+|++.++.+.. ..++++.+|.+|++...
T Consensus 157 k~al~~~~~~la~e~~--~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 157 NAALMAFTRALGGKSL--DDGVRVVGVNPGPVATD 189 (259)
T ss_pred HHHHHHHHHHHHHHhC--ccCeEEEEEecCccccH
Confidence 9999999999987743 45679999999988654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=203.88 Aligned_cols=217 Identities=13% Similarity=0.118 Sum_probs=167.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||+||||++++++|+++|++++++ .|+.. ..+.+...+ +.++.+|+++.++++++++.+.+.++++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~-~r~~~---~~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWAT-ARKAE---DVEALAAAG--FTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEE-eCCHH---HHHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999999999865554 55432 122333333 578899999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||... ..++.+.+.++|++.+++|+.|++++.++++|.|++ ..++||++||+++..+.++...|+++|+++
T Consensus 76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y~~sK~al 150 (274)
T PRK05693 76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR----SRGLVVNIGSVSGVLVTPFAGAYCASKAAV 150 (274)
T ss_pred EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----cCCEEEEECCccccCCCCCccHHHHHHHHH
Confidence 999999876 677888899999999999999999999999998743 247899999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-----------------hhHHHHhcCCCCCCHHHHHHHHH
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-----------------TDFYFKSSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-----------------~~~~~~~~g~~~l~~~~~~~~l~ 291 (1005)
+.|++.++.+.. ..++++++|.+|... +.|....... ...........+++++++.+.+.
T Consensus 151 ~~~~~~l~~e~~--~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 227 (274)
T PRK05693 151 HALSDALRLELA--PFGVQVMEVQPGAIA-SQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLL 227 (274)
T ss_pred HHHHHHHHHHhh--hhCeEEEEEecCccc-cccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 999998877632 345688889888764 3332211100 00001112233567888888888
Q ss_pred HHHhccch
Q psy612 292 QLLIQDKI 299 (1005)
Q Consensus 292 ~~l~~~~~ 299 (1005)
.++..+.+
T Consensus 228 ~~~~~~~~ 235 (274)
T PRK05693 228 AAVQQSPR 235 (274)
T ss_pred HHHhCCCC
Confidence 88876554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-20 Score=203.65 Aligned_cols=223 Identities=13% Similarity=0.113 Sum_probs=172.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||++|||.+++++|+++|++++++.++.. ..+...+.++..+.++.++.||+++.+++.++++++.+.+++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999987655544432 334455566666778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||.......+.+.+.++|.+++++|+.|++++.+++.+.|+ +.++||++||+++..+.++...|+++|
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~-----~~g~iV~isS~~~~~~~~~~~~Y~~sK 199 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK-----QGSAIINTGSITGYEGNETLIDYSATK 199 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh-----hCCeEEEEecccccCCCCCcchhHHHH
Confidence 999999999864345688899999999999999999999999999863 236899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-c-hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++++|..|.... .+.... . ........... -....+++.++.+..++...
T Consensus 200 ~a~~~l~~~la~~~~--~~gIrv~~i~pG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~ 271 (290)
T PRK06701 200 GAIHAFTRSLAQSLV--QKGIRVNAVAPGPIWT-PLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPD 271 (290)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecCCCCC-cccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 999999999988743 3456888998776543 332111 0 11111111111 22456788888877776543
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-20 Score=199.11 Aligned_cols=184 Identities=16% Similarity=0.220 Sum_probs=155.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
|++|||||+||||+.++++|+++|++++++.+++. ..++...++...+.++.++.+|++|++++.++++.+.+.++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999999999999999999999997766665332 23334444555567899999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ...+.+.+.++|++.+++|+.+++.+.+.+++.|++ .+.++||++||..+..+.+++..|+++|++
T Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~iss~~~~~~~~~~~~y~~sk~a 156 (242)
T TIGR01829 81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE---RGWGRIINISSVNGQKGQFGQTNYSAAKAG 156 (242)
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEcchhhcCCCCCcchhHHHHHH
Confidence 9999999876 667888899999999999999999999999998643 346789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+..|++.++.+.. ..++++.++.+|.+.+
T Consensus 157 ~~~~~~~la~~~~--~~~i~v~~i~pg~~~t 185 (242)
T TIGR01829 157 MIGFTKALAQEGA--TKGVTVNTISPGYIAT 185 (242)
T ss_pred HHHHHHHHHHHhh--hhCeEEEEEeeCCCcC
Confidence 9999988877633 3456888888777654
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=201.20 Aligned_cols=215 Identities=15% Similarity=0.094 Sum_probs=166.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++++.|+++|+++++ +.|+... ...+.++.++++|++++++++++++.+.+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~-~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVV-CGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999986554 4554321 1235678899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.|.+ +...++||++||+++..+.++...|+++|+
T Consensus 77 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK07856 77 DVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQ--QPGGGSIVNIGSVSGRRPSPGTAAYGAAKA 153 (252)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence 99999999876 667888999999999999999999999999998643 223578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. .. +++.+|.+|... +.|.... ........+...+ ...++++..+.+..++..
T Consensus 154 a~~~l~~~la~e~~--~~-i~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~ 223 (252)
T PRK07856 154 GLLNLTRSLAVEWA--PK-VRVNAVVVGLVR-TEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASD 223 (252)
T ss_pred HHHHHHHHHHHHhc--CC-eEEEEEEecccc-ChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999988753 22 688888877664 3332211 0101111111111 234678888887776643
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-20 Score=204.13 Aligned_cols=220 Identities=12% Similarity=0.149 Sum_probs=168.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++|||||+||||+.++++|+++|++++ +..|+. ..++.. +..+.++.++++|++|++++.++++.+.+.++++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~-~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVV-ATARDTATLADLA---EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEECCHHHHHHHH---HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999997644 445543 222222 2235568899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.+++++.+.++|.|++ .+.++||++||.++..+.+++..|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~vsS~~~~~~~~~~~~Y~~sKa 154 (275)
T PRK08263 79 DIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE---QRSGHIIQISSIGGISAFPMSGIYHASKW 154 (275)
T ss_pred CEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEEcChhhcCCCCCccHHHHHHH
Confidence 99999999987 778889999999999999999999999999998653 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------c---hhh-hHHHHhcCC-CC-CCHHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------N---EQT-DFYFKSSKQ-KV-LHENDGLKLFEQLL 294 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------~---~~~-~~~~~~~g~-~~-l~~~~~~~~l~~~l 294 (1005)
+++.|++.++.+.. ..+++++.|.+|.+.. .|.... . ... ......... .. .++++..+.+..++
T Consensus 155 a~~~~~~~la~e~~--~~gi~v~~v~Pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~ 231 (275)
T PRK08263 155 ALEGMSEALAQEVA--EFGIKVTLVEPGGYST-DWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLV 231 (275)
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEecCCccC-CccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 99999998877632 2345888888876643 222100 0 000 001110111 22 67888888888887
Q ss_pred hccc
Q psy612 295 IQDK 298 (1005)
Q Consensus 295 ~~~~ 298 (1005)
..+.
T Consensus 232 ~~~~ 235 (275)
T PRK08263 232 DAEN 235 (275)
T ss_pred cCCC
Confidence 7553
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-20 Score=200.32 Aligned_cols=223 Identities=12% Similarity=0.077 Sum_probs=173.0
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
..++++|||||+||||+.++++|+++|++++++.+++. ..+.+.+++...+.++..+.||++|.+++.++++++.+.+|
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999997777666543 33455556666677889999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.++|++ ...+.+|+++|..+..+.++...|+++
T Consensus 87 ~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~~s~~~~~~~p~~~~Y~~s 162 (258)
T PRK09134 87 PITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPA---DARGLVVNMIDQRVWNLNPDFLSYTLS 162 (258)
T ss_pred CCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCceEEEECchhhcCCCCCchHHHHH
Confidence 9999999999876 667888899999999999999999999999998643 345789999998777777888899999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++..|++.++.+.. . .+++++|.+|..... ... ............. ....++++.++.+..++..+
T Consensus 163 K~a~~~~~~~la~~~~--~-~i~v~~i~PG~v~t~-~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (258)
T PRK09134 163 KAALWTATRTLAQALA--P-RIRVNAIGPGPTLPS-GRQ-SPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP 231 (258)
T ss_pred HHHHHHHHHHHHHHhc--C-CcEEEEeecccccCC-ccc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999999999887643 1 267888887755332 111 0111111111111 12467889998888888643
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-20 Score=199.92 Aligned_cols=217 Identities=13% Similarity=0.129 Sum_probs=169.4
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-c-hHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-L-NSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~-~~~~~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++|||||++|||+++|++|+++|..+|+++.|++ . .+++.++++..+. +++++++|++|++++.++++++.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~- 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA- 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-
Confidence 46789999999999999999999999744555556654 3 5666677776654 789999999999999999999876
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
+|++|++|||+|... ...-...+.+++.+++++|+.|++.+.+.++|.|++ .+.++||++||+++..+.++.+.|+
T Consensus 85 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~---~~~~~iv~isS~~g~~~~~~~~~Y~ 160 (253)
T PRK07904 85 GGDVDVAIVAFGLLG-DAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA---QGFGQIIAMSSVAGERVRRSNFVYG 160 (253)
T ss_pred cCCCCEEEEeeecCC-chhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh---cCCceEEEEechhhcCCCCCCcchH
Confidence 589999999999865 322122245566789999999999999999999753 3458899999999988888889999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
++|+++.+|++.++.+.. ..++++++|.+|...+ .|..... . ....+++++.++.+...+..+..
T Consensus 161 ~sKaa~~~~~~~l~~el~--~~~i~v~~v~Pg~v~t-~~~~~~~--------~-~~~~~~~~~~A~~i~~~~~~~~~ 225 (253)
T PRK07904 161 STKAGLDGFYLGLGEALR--EYGVRVLVVRPGQVRT-RMSAHAK--------E-APLTVDKEDVAKLAVTAVAKGKE 225 (253)
T ss_pred HHHHHHHHHHHHHHHHHh--hcCCEEEEEeeCceec-chhccCC--------C-CCCCCCHHHHHHHHHHHHHcCCC
Confidence 999999999998877643 3456889998887654 4432111 0 11257999999999999877644
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-20 Score=200.28 Aligned_cols=219 Identities=18% Similarity=0.189 Sum_probs=174.1
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCC--CHHHHHHHHHHHHh
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVS--DKLKMISEINSIIN 141 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvt--d~~~v~~~~~~i~~ 141 (1005)
+.++|++|||||+|+||..++++|+++|++++++.++.+..++..+++++.+ .++.++.+|++ +++++.++++.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999866555544444455566666544 46777778885 78999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
.++++|+||||||......++.+.+.+.|++.+++|+.|++++.+++.++|+ ..+.++||++||.++..+.+++..|
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~---~~~~~~iv~~ss~~~~~~~~~~~~Y 165 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL---KSPAASLVFTSSSVGRQGRANWGAY 165 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH---hCCCCEEEEEccHhhcCCCCCCccc
Confidence 9999999999999865345677889999999999999999999999999864 3456899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
+++|++++.|++..+.+.. ..++++.+|+|+.|.. .|...... ........++++..+.+..++.
T Consensus 166 ~~sK~a~~~~~~~~~~~~~--~~~i~~~~v~pg~v~t-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 230 (247)
T PRK08945 166 AVSKFATEGMMQVLADEYQ--GTNLRVNCINPGGTRT-AMRASAFP------GEDPQKLKTPEDIMPLYLYLMG 230 (247)
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCEEEEEEecCCccC-cchhhhcC------cccccCCCCHHHHHHHHHHHhC
Confidence 9999999999998877643 4567899999998854 44221100 0112245788999998888764
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-20 Score=199.46 Aligned_cols=224 Identities=16% Similarity=0.160 Sum_probs=170.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.|++|||||+||||.+++++|+++|+.++++.++.. ..++..+.++..+.++.++.+|+++++++.++++.+.+.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999986665554432 2344455566566789999999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC---CcEEEEecCcccccCCCCChhhh
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK---LDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~---~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
|+||||||.... ..++.+.+.++|++++++|+.|++++.+++.+.|++..... .++||++||+.+..+.++.+.|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 999999998541 34677889999999999999999999999999876432211 56799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCC----CCCHHHHHHHHHHHHh
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK----VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~----~l~~~~~~~~l~~~l~ 295 (1005)
++|++++.|++.++.+.. ..++++++|.+|.+.. .|...........+.. +.. ...+++..+.+..++.
T Consensus 162 ~sK~a~~~~~~~l~~~~~--~~gi~v~~i~pg~v~t-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~~i~~l~~ 234 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLA--EEGIGVYEVRPGLIKT-DMTAPVTAKYDALIAK-GLVPMPRWGEPEDVARAVAALAS 234 (256)
T ss_pred HHHHHHHHHHHHHHHHHH--HhCCEEEEEecCCCcC-ccccccchhHHhhhhh-cCCCcCCCcCHHHHHHHHHHHhC
Confidence 999999999998876532 2345899999988754 3322111111111111 111 2357777777776654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-20 Score=203.60 Aligned_cols=183 Identities=14% Similarity=0.164 Sum_probs=150.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||++++++|+++|+++++ +.|+. ..+++.+ ..+.++.++++|++|.++++++++++.+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAV-LERSAEKLASLRQ---RFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHH---HhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999987544 45543 2222222 23556888999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHH----HHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 146 IDGVLHIAGISGLTSNILEANYKN----FYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~----~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+|+||||||+.....++.+.+.++ |++++++|+.|++.+.++++|.|++ ..+.||++||+++..+.++...|
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~~~~~~~Y 156 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKA----SGGSMIFTLSNSSFYPGGGGPLY 156 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHh----cCCEEEEECChhhcCCCCCCchh
Confidence 999999999864234566666665 9999999999999999999998653 24789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++|+++..|++.++.+... .+++.+|.+|... +.|
T Consensus 157 ~~sK~a~~~~~~~la~el~~---~Irvn~i~PG~i~-t~~ 192 (263)
T PRK06200 157 TASKHAVVGLVRQLAYELAP---KIRVNGVAPGGTV-TDL 192 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CcEEEEEeCCccc-cCC
Confidence 99999999999999887532 3788999887663 444
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=203.60 Aligned_cols=184 Identities=14% Similarity=0.184 Sum_probs=153.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+||||+++|++|+++|++++++.++.+..++..++ .+.++.++++|++|++++.++++++.+.++++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALE---IGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH---hCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999998755554333323333322 24568889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|+.++++|+.+++++.+++.+.|.+ ....++||++||..+..+.+++..|+++|+
T Consensus 82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 158 (257)
T PRK07067 82 DILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVE--QGRGGKIINMASQAGRRGEALVSHYCATKA 158 (257)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHh--cCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence 99999999876 677888999999999999999999999999988643 223578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+++.|++.++.+.. ..++++++|.+|.+.+
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~i~pg~v~t 188 (257)
T PRK07067 159 AVISYTQSAALALI--RHGINVNAIAPGVVDT 188 (257)
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEeeCcccc
Confidence 99999999887643 3456889998887643
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=200.23 Aligned_cols=188 Identities=15% Similarity=0.208 Sum_probs=152.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||..+|++|+++|++++++.++.+..+...+.+...+.++.++.||++|+++++++++++.+.++++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999865444443333445555666667788899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHH-HHHHhcCCCcEEEEecCcccccCCCCC----hhh
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENT-ILKLQKNKLDFVCYFSSSSAILGDFGS----CDY 221 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~-l~~~~~~~~~~iV~~SSia~~~g~~g~----~~Y 221 (1005)
|+||||||... ..++.+.+.+.|++++++|+.+++++.+++.++ |+ ..+.++||++||..+..+.++. ..|
T Consensus 91 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~---~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y 166 (259)
T PRK08213 91 DILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI---PRGYGRIINVASVAGLGGNPPEVMDTIAY 166 (259)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH---hcCCeEEEEECChhhccCCCccccCcchH
Confidence 99999999866 567788899999999999999999999999887 43 2345789999999888776554 899
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++|++++.|++.++++.. ..++++.++.++.. ++.+
T Consensus 167 ~~sKa~~~~~~~~~a~~~~--~~gi~v~~v~Pg~~-~t~~ 203 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWG--PHGIRVNAIAPGFF-PTKM 203 (259)
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCEEEEEEecCcC-CCcc
Confidence 9999999999998877643 23457777766544 4444
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=210.52 Aligned_cols=189 Identities=14% Similarity=0.088 Sum_probs=153.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|+++||||++|||+++|+.|+++|++++++.++.+..++..+++.+. +.++.++.||++|.++++++++++.+.++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999986655544444455566666543 35788999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------- 215 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--------- 215 (1005)
+||+||||||+.. . ...+.+.+.|+.++++|+.|++.|.+.++|.|++ ..++||++||.++..+.
T Consensus 93 ~iD~li~nAG~~~-~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~----~~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 93 PIHLLINNAGVMT-P-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRA----GRARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred CccEEEECCcccc-C-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh----CCCCeEEEechhhcCCCcCccccccc
Confidence 9999999999865 2 3446788999999999999999999999999753 24689999999886653
Q ss_pred ---CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 216 ---FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 216 ---~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
.+...|+.+|.++..|++.++.+....+.++++.+|++|... +.|.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~-T~~~ 215 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAP-TNLL 215 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceec-cCcc
Confidence 456789999999999999887642222345799999998774 4453
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=198.87 Aligned_cols=223 Identities=11% Similarity=0.130 Sum_probs=173.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||.+++++|+++|++ |+++.|+. ..++....+.. +.++.++.||++|++++.++++++.+++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999987 55555553 34444455544 567899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||......++.+.+.++|++++++|+.|++.+.+.+.+.|++ ...++||++||..+..+.++...|+.+|
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG---EGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 9999999998653556788899999999999999999999999999643 3567899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----hhh-HHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTD-FYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~-~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.+++.++.+.. ..++++++|.+|.+. +.|...... ... ...+... .....+++....+..++...
T Consensus 159 ~~~~~~~~~~a~~~~--~~~i~v~~i~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 159 GAVITLTKALAAELG--PDKIRVNAVAPVVVE-TGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEEECccC-CCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999998877632 335689999998774 444322111 100 1111111 12357788888888777543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=198.08 Aligned_cols=219 Identities=13% Similarity=0.123 Sum_probs=169.4
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++||||+||||.++++.|+++|++++++ .|+. ..+++.+ ..+.++.++.+|++|.++++++++.+.+.++++|+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIAT-GRRQERLQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHH---HhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999865544 5543 2222222 23557889999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||......++.+.+.++|++++++|+.|++.+.+.+.|+|++ .+.++||++||.++..+.++...|+++|+++
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~ 154 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE---RNHGHIINIGSTAGSWPYAGGNVYGATKAFV 154 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEECCcccCCCCCCCchhHHHHHHH
Confidence 9999997542456778899999999999999999999999998643 3467899999999998999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cchhhhHHH-HhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~~~~~~~-~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+.|++.++.+.. ..++++.+|.+|...++.+... ......... ...+..++++++..+.+..++..+
T Consensus 155 ~~~~~~l~~~~~--~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 155 RQFSLNLRTDLH--GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHhc--CCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCC
Confidence 999999887743 4456888898887754443211 000000000 112335689999999988887644
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-20 Score=215.27 Aligned_cols=285 Identities=20% Similarity=0.231 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCs 628 (1005)
...|+.+++.+||+|||+++++++ +|++|....+.... ....+..++..+|++ +|+++|+++|+
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~~-----------~~~~a~~va~~lGl~~~~~~~v~~aCa 86 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFVS-----------QEHIAALIADYAGLAPIPATRVEAACA 86 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc-----------cccHHHHHHHHcCCCCCCeeEEeCCcH
Confidence 367889999999999999988776 77887654322110 012567789999998 69999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH--H----------------------HHHH------HHcCCC-----
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE--A----------------------YIAM------TSAGML----- 672 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~--~----------------------~~~~------~~~~~l----- 672 (1005)
|++.||.+|++.|++|+||.+||+|++.+.. |. . .+.+ .+.|.-
T Consensus 87 sg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a 166 (389)
T PRK06064 87 SGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLA 166 (389)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999999999999974221 10 0 0000 000000
Q ss_pred ------------CCCCC----------------CcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccC
Q psy612 673 ------------SPDGK----------------CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 724 (1005)
Q Consensus 673 ------------s~~g~----------------~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~d 724 (1005)
.|... +.|+ ...|--.++||++++||++.+.|.+.++++ ..|+|++..++
T Consensus 167 ~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl-~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~ 244 (389)
T PRK06064 167 LVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPL-KLLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASD 244 (389)
T ss_pred HHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCC-chhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecC
Confidence 00000 0011 122344679999999999999999988664 58999998887
Q ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH--------hcc-CCCCCCceeE
Q psy612 725 GKTNGIT--APNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV--------FKN-KTYNQKFCAI 793 (1005)
Q Consensus 725 G~~~~~~--~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~--------~~~-~~~~~~~~~i 793 (1005)
+.+.... .+...+...++++||++|||+|+||||+|.|+++|. .+.++++++.-+ +.. .......+||
T Consensus 245 ~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pv 323 (389)
T PRK06064 245 TIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPV 323 (389)
T ss_pred cccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcCCCCCCchHHHHHCCCccCCCCeee
Confidence 6543211 123456778999999999999999999999999997 345555555311 111 1111223567
Q ss_pred eccCCC--cCchhhchhhHHHHHHHHHhhcCC--CCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccC
Q psy612 794 TSNKSN--IGHTFAASGLVSLINLVQSIKYKI--IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869 (1005)
Q Consensus 794 gsvK~~--iGH~~~AaG~~~lik~~l~l~~~~--ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG 869 (1005)
...++. .||+.+|+|+..++.++.+|+.+- -..+ . ...+++.+.++|
T Consensus 324 N~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rq---------------------------v--~~a~~~l~~~~g 374 (389)
T PRK06064 324 NPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQ---------------------------V--IGAGYGLTHNVG 374 (389)
T ss_pred cCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---------------------------C--CCccEEEEecCC
Confidence 555554 599999999999999999999852 1111 0 134778888887
Q ss_pred -CCCceEEEEEec
Q psy612 870 -MSGTNAHIVLQE 881 (1005)
Q Consensus 870 -~gG~nah~il~~ 881 (1005)
.+++++.+||+.
T Consensus 375 ~~~~~~~~~vl~~ 387 (389)
T PRK06064 375 GTGHTAVVHILSR 387 (389)
T ss_pred CccceEEEEEEEe
Confidence 345666667653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-20 Score=199.21 Aligned_cols=220 Identities=15% Similarity=0.137 Sum_probs=170.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+||||.++|+.|+++|++ |+++.|+....+...++. +.++.++.+|++++++++++++++.+.++++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDVAEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999986 556666654333333332 3457789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++.+++|+.|++++.+++.+.|++ ...++||++||+.+..+.+++..|+++|+
T Consensus 91 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 91 DILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIA---AGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHh---cCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 99999999876 677888899999999999999999999999998643 34678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-c-hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|.... . .......+.... ....+++..+.+..++..
T Consensus 167 a~~~~~~~la~e~~--~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 236 (255)
T PRK06841 167 GVVGMTKVLALEWG--PYGITVNAISPTVVL-TELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASD 236 (255)
T ss_pred HHHHHHHHHHHHHH--hhCeEEEEEEeCcCc-CcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999887743 334688888877664 3332211 0 011111111111 245788888888887754
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-20 Score=200.59 Aligned_cols=185 Identities=16% Similarity=0.180 Sum_probs=159.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+|+||++++++|+++|.+++++.++.+..++...++++.+.++.++.||++|++++.++++.+.+.++++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999876666555555566666777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|+.++++|+.|++++.+.+++.|++ .+.++||++||+.+..+.++++.|+++|+
T Consensus 83 d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~iss~~~~~~~~~~~~y~~~k~ 158 (258)
T PRK12429 83 DILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA---QGGGRIINMASVHGLVGSAGKAAYVSAKH 158 (258)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh---cCCeEEEEEcchhhccCCCCcchhHHHHH
Confidence 99999999876 677888899999999999999999999999998653 45678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++..+++.++.+.. ..++++.++.+|...
T Consensus 159 a~~~~~~~l~~~~~--~~~i~v~~~~pg~v~ 187 (258)
T PRK12429 159 GLIGLTKVVALEGA--THGVTVNAICPGYVD 187 (258)
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEecCCCc
Confidence 99999998877633 345677788766554
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.2e-20 Score=198.94 Aligned_cols=186 Identities=11% Similarity=0.102 Sum_probs=155.5
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecC-CCchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGR-SKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r-~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++||||+||||++++++|+++|++++++.++ .+..+++.+++.... ..+.++++|++|+++++++++++.+.+|++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999866555544 333445555554432 2456789999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ...+.+.+.++|++++++|+.+.+.+.+.+++.|++ .+.++||++||.++..+.+++..|+++|++
T Consensus 82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a 157 (251)
T PRK07069 82 VLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA---SQPASIVNISSVAAFKAEPDYTAYNASKAA 157 (251)
T ss_pred EEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh---cCCcEEEEecChhhccCCCCCchhHHHHHH
Confidence 9999999877 677889999999999999999999999999999643 456899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
++.|++.++.+....+.++++.+|.+|.+. +.|
T Consensus 158 ~~~~~~~la~e~~~~~~~i~v~~v~pg~v~-t~~ 190 (251)
T PRK07069 158 VASLTKSIALDCARRGLDVRCNSIHPTFIR-TGI 190 (251)
T ss_pred HHHHHHHHHHHhcccCCcEEEEEEeecccC-Ccc
Confidence 999999988875544556788999887664 444
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.8e-20 Score=201.00 Aligned_cols=188 Identities=15% Similarity=0.168 Sum_probs=160.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+|+||+.+++.|+++|++++++.++.+..++..+++++.+.++.++++|++|.+++.++++.+.+.++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999976555444444556667777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|+..+++|+.|++.+.+.+++.|. +..+.++||++||+.+..+.++...|+++|+
T Consensus 86 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~--~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~ 162 (262)
T PRK13394 86 DILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMY--KDDRGGVVIYMGSVHSHEASPLKSAYVTAKH 162 (262)
T ss_pred CEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHH--hhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 99999999876 66777888999999999999999999999999862 2345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
+++.+++.++.+.. ..++++++|.+|.+.+.
T Consensus 163 a~~~~~~~la~~~~--~~~i~v~~v~pg~v~~~ 193 (262)
T PRK13394 163 GLLGLARVLAKEGA--KHNVRSHVVCPGFVRTP 193 (262)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCcccch
Confidence 99999998877643 34568889998877543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-20 Score=199.25 Aligned_cols=221 Identities=12% Similarity=0.106 Sum_probs=164.7
Q ss_pred EEEEECChhHHHHHHHHHHHH----cCCcEEEEecCC-CchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 70 TYLITGGTGRLGMLFSDYLIN----KYSTNLILSGRS-KLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~----~Ga~~vil~~r~-~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
++|||||++|||+++|+.|++ +|+++ ++++|+ +..++..++++. .+.++.++.+|++|.++++++++.+.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V-~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVL-VLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEE-EEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 689999999999999999997 67754 445554 445566666765 2557889999999999999999999888
Q ss_pred cCCc----cEEEEcCcccCcc-chhccC-CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 143 IGPI----DGVLHIAGISGLT-SNILEA-NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 143 ~g~i----dgvIh~AG~~~~~-~~~~~~-t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
+|++ |+||||||+.... ....+. +.++|++++++|+.|++.+.+.++|.|++. ....+.||++||+++..+.+
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~-~~~~~~iv~isS~~~~~~~~ 159 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS-PGLNRTVVNISSLCAIQPFK 159 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc-CCCCCEEEEECCHHhCCCCC
Confidence 7753 6999999985411 223333 578999999999999999999999987532 12246899999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----c-hhhhHHHHhcC-CCCCCHHHHHHH
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----N-EQTDFYFKSSK-QKVLHENDGLKL 289 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~-~~~~~~~~~~g-~~~l~~~~~~~~ 289 (1005)
+...|+++|++++.|++.++.+.. ..++++.+|.+|.+ ++.|.... . ........... -+..+++|....
T Consensus 160 ~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~ 236 (256)
T TIGR01500 160 GWALYCAGKAARDMLFQVLALEEK--NPNVRVLNYAPGVL-DTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQK 236 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEecCCcc-cchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHH
Confidence 999999999999999999988754 44578888877766 45553211 0 00001111111 135688888888
Q ss_pred HHHHHh
Q psy612 290 FEQLLI 295 (1005)
Q Consensus 290 l~~~l~ 295 (1005)
+..++.
T Consensus 237 ~~~l~~ 242 (256)
T TIGR01500 237 LLSLLE 242 (256)
T ss_pred HHHHHh
Confidence 888774
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-20 Score=198.31 Aligned_cols=181 Identities=19% Similarity=0.214 Sum_probs=152.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||++++++|+++|++ |++++|+.. ...+..++.+.++.++++|++|.+++..+++.+.+.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGAR-VAITGRDPA--SLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCHH--HHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999986 455555531 1222223346778899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|+ ..+++|++||.++..|.+++..|+++|+
T Consensus 82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~~i~~~S~~~~~~~~~~~~Y~~sK~ 155 (249)
T PRK06500 82 DAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA-----NPASIVLNGSINAHIGMPNSSVYAASKA 155 (249)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----cCCEEEEEechHhccCCCCccHHHHHHH
Confidence 99999999876 66788899999999999999999999999999863 2367999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+++.|++.++.+.. ..++++++|.+|....
T Consensus 156 a~~~~~~~la~e~~--~~gi~v~~i~pg~~~t 185 (249)
T PRK06500 156 ALLSLAKTLSGELL--PRGIRVNAVSPGPVQT 185 (249)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCcCCC
Confidence 99999998877643 3456888998887754
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=197.09 Aligned_cols=223 Identities=17% Similarity=0.181 Sum_probs=173.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||+++++.|+++|++++++.++.+...+..++++..+.++.++.+|++|+++++++++++.+.++++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999876555443344455666676667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++.+.+|+.|++++.+++.+.|.+ .+.++||++||..+..+.++...|+++|+
T Consensus 86 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~y~~sK~ 161 (250)
T PRK12939 86 DGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRD---SGRGRIVNLASDTALWGAPKLGAYVASKG 161 (250)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCeEEEEECchhhccCCCCcchHHHHHH
Confidence 99999999877 677888999999999999999999999999998643 34678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.+++.++.+.. ..++++..|.+|.. .+.|..... ............ ....+++..+.+..++..
T Consensus 162 ~~~~~~~~l~~~~~--~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T PRK12939 162 AVIGMTRSLARELG--GRGITVNAIAPGLT-ATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSD 231 (250)
T ss_pred HHHHHHHHHHHHHh--hhCEEEEEEEECCC-CCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999998776532 33457788887755 333322111 111111111111 236778888888877653
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-20 Score=203.23 Aligned_cols=183 Identities=17% Similarity=0.199 Sum_probs=148.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|+++||||+||||+++|+.|+++|++++++ .|+.. ..+++.. .+.++.++.+|++|.+++.++++++.+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~-~r~~~---~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVL-DKSAA---GLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCHH---HHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999875554 55432 1222322 3567889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCH----HHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 146 IDGVLHIAGISGLTSNILEANY----KNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~----~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+|+||||||+.....++.+.+. ++|++++++|+.|++++.++++|+|++ . .+++|++||.++..+.++...|
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~-~g~iv~~sS~~~~~~~~~~~~Y 155 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA---S-RGSVIFTISNAGFYPNGGGPLY 155 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh---c-CCCEEEEeccceecCCCCCchh
Confidence 9999999997532234444443 579999999999999999999998743 2 3679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++|+++.+|++.++.+.. .. +++.+|.+|... +.|
T Consensus 156 ~~sKaa~~~l~~~la~e~~--~~-irvn~i~PG~i~-t~~ 191 (262)
T TIGR03325 156 TAAKHAVVGLVKELAFELA--PY-VRVNGVAPGGMS-SDL 191 (262)
T ss_pred HHHHHHHHHHHHHHHHhhc--cC-eEEEEEecCCCc-CCC
Confidence 9999999999999988753 22 788899887664 444
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=195.72 Aligned_cols=219 Identities=14% Similarity=0.153 Sum_probs=165.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~--~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
|++|||||+||||+.+|++|+++|++++++ .|+.. .++....+...+.++.++.+|++|.+++.++++.+.++++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIAT-YFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEE-eCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999755444 44432 222223333345678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++++|+.|++++.+.+++.|++ .+.++||++||..+..+.+++..|+++|+
T Consensus 82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~iss~~~~~~~~~~~~Y~~sK~ 157 (245)
T PRK12824 82 DILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE---QGYGRIINISSVNGLKGQFGQTNYSAAKA 157 (245)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---hCCeEEEEECChhhccCCCCChHHHHHHH
Confidence 99999999876 677888999999999999999999999999998653 35679999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh-HHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.|++.++.+.. ..+++++.+.+|.+. +.|......... .......+ ...++++..+.+..++.
T Consensus 158 a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 225 (245)
T PRK12824 158 GMIGFTKALASEGA--RYGITVNCIAPGYIA-TPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVS 225 (245)
T ss_pred HHHHHHHHHHHHHH--HhCeEEEEEEEcccC-CcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999998876643 234577778776553 344321111111 11111112 23467777777766653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=194.95 Aligned_cols=225 Identities=16% Similarity=0.123 Sum_probs=169.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||+||||++++++|+++|++++++..|+. ...+...+++..+.++..+++|++|+++++++++++.+.++++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999998766566653 33455556666677888999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNR 226 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaana 226 (1005)
+||||||.......+.+.+.++|+..+++|+.+++++.+.+++.|.+......++||++||.++..+.+++ ..|+++|+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG 161 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence 99999998643566788899999999999999999999999998754333345789999999999988875 78999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.+++.++.+.. ..++++++|.++...+........... ........+ ...++++..+.+..++.
T Consensus 162 ~~~~~~~~l~~~~~--~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 230 (247)
T PRK09730 162 AIDTLTTGLSLEVA--AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLS 230 (247)
T ss_pred HHHHHHHHHHHHHH--HhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcC
Confidence 99999998876532 234588888877664332111111100 000111111 12367777777776654
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=195.12 Aligned_cols=222 Identities=13% Similarity=0.188 Sum_probs=168.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||+.++++|+++|++++++.++.+..++..++++..+.++.++++|+++.+++.++++.+.+.++++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865544443344455666676667889999999999999999999998888999
Q ss_pred cEEEEcCcccCccch--------h-ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 147 DGVLHIAGISGLTSN--------I-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~--------~-~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
|+||||||... ... + .+.+.++|+.++++|+.|++++.+.+.+.|.+. ...+.||++||. +..|.++
T Consensus 84 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~~~~iv~~ss~-~~~~~~~ 159 (253)
T PRK08217 84 NGLINNAGILR-DGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIES--GSKGVIINISSI-ARAGNMG 159 (253)
T ss_pred CEEEECCCccC-cCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCCeEEEEEccc-cccCCCC
Confidence 99999999754 222 2 677899999999999999999999999987532 234678999886 4578889
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHh-cC-CCCCCHHHHHHHHHHHHh
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SK-QKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g-~~~l~~~~~~~~l~~~l~ 295 (1005)
.+.|+++|++++.+++.++.+.. ..+++++++.+|.+.. .|...........+.. .. ....++++..+.+..++.
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 236 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELA--RYGIRVAAIAPGVIET-EMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIE 236 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHH--HcCcEEEEEeeCCCcC-ccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc
Confidence 99999999999999998877632 3456889999888754 3332211111111111 11 123477888888887774
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=204.21 Aligned_cols=227 Identities=13% Similarity=0.069 Sum_probs=165.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++|||||++|||+++|+.|+++|+.+|+++.|+. ..++..+++...+.++.++.+|++|.++++++++++.+.+++|
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 679999999999999999999999933455555553 3444555565445678889999999999999999998889999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------ 214 (1005)
|++|||||+..+.....+.+.++|++++++|+.|++++.+.++|+|++.. ...++||++||+++..+
T Consensus 83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP-NKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCeEEEEecCccccccCCCcCCCcccc
Confidence 99999999864233345678999999999999999999999999975421 12478999999987432
Q ss_pred ---------------------CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHH-
Q psy612 215 ---------------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY- 272 (1005)
Q Consensus 215 ---------------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~- 272 (1005)
..+...|+++|+++..+++.++++.. ...++++++|++|....+.|...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~ 240 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFH-DETGITFASLYPGCIADTGLFREHVPLFRTLF 240 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhc-cCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence 12456799999999999988876532 1235789999988775566654321111000
Q ss_pred --HHh-cCCCCCCHHHHHHHHHHHHhc
Q psy612 273 --FKS-SKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 273 --~~~-~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+.. .....++++++.+.+..++..
T Consensus 241 ~~~~~~~~~~~~~~~~~a~~l~~~~~~ 267 (314)
T TIGR01289 241 PPFQKYITKGYVSEEEAGERLAQVVSD 267 (314)
T ss_pred HHHHHHHhccccchhhhhhhhHHhhcC
Confidence 000 001246788888777776654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-20 Score=187.33 Aligned_cols=175 Identities=30% Similarity=0.550 Sum_probs=152.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HH---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SI---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~---~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
|+++||||+||||++++++|+++|..++++..|+... +. ..++++..+.++.++.+|+++++++.++++++...++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999998777777765432 21 2355656677888999999999999999999988899
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+|||+||... ...+.+.+.++|++.+++|+.+++++.+++ .....+++|++||..+..+.++...|+++
T Consensus 81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------~~~~~~~ii~~ss~~~~~~~~~~~~y~~s 152 (180)
T smart00822 81 PLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELT-------RDLPLDFFVLFSSVAGVLGNPGQANYAAA 152 (180)
T ss_pred CeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHh-------ccCCcceEEEEccHHHhcCCCCchhhHHH
Confidence 9999999999876 567788899999999999999999999985 23356789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.|+++++..+. ++++++||+|.
T Consensus 153 k~~~~~~~~~~~~~~~------~~~~~~~g~~~ 179 (180)
T smart00822 153 NAFLDALAAHRRARGL------PATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHHHHhcCC------ceEEEeecccc
Confidence 9999999999988877 89999999985
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=196.86 Aligned_cols=220 Identities=12% Similarity=0.053 Sum_probs=165.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++|||||+||||+++|++|+++|++++++..+.. ..++..++++..+.++.++++|++|+++++++++.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999998777765543 223444556556778889999999999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEe-cCcccccCCCCChhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYF-SSSSAILGDFGSCDY 221 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~-SSia~~~g~~g~~~Y 221 (1005)
++++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|+ + .+.++++ ||..+. ..+++..|
T Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~--~~~iv~~~ss~~~~-~~~~~~~Y 159 (257)
T PRK12744 87 FGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLN---D--NGKIVTLVTSLLGA-FTPFYSAY 159 (257)
T ss_pred hCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhc---c--CCCEEEEecchhcc-cCCCcccc
Confidence 999999999999876 66788889999999999999999999999998853 1 2446654 565443 45788999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hh-h---HHHHhcCC---CCCCHHHHHHHHHHH
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QT-D---FYFKSSKQ---KVLHENDGLKLFEQL 293 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~-~---~~~~~~g~---~~l~~~~~~~~l~~~ 293 (1005)
+++|++++.|++.++.+.. ..++++++|.+|.+... |...... .. . .......+ ....++|....+..+
T Consensus 160 ~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 236 (257)
T PRK12744 160 AGSKAPVEHFTRAASKEFG--ARGISVTAVGPGPMDTP-FFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFL 236 (257)
T ss_pred hhhHHHHHHHHHHHHHHhC--cCceEEEEEecCccccc-hhccccccchhhcccccccccccccCCCCCHHHHHHHHHHh
Confidence 9999999999999988743 34568899998877543 2211100 00 0 00000111 345678888888887
Q ss_pred Hhc
Q psy612 294 LIQ 296 (1005)
Q Consensus 294 l~~ 296 (1005)
+..
T Consensus 237 ~~~ 239 (257)
T PRK12744 237 VTD 239 (257)
T ss_pred hcc
Confidence 763
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=204.11 Aligned_cols=223 Identities=11% Similarity=0.060 Sum_probs=163.0
Q ss_pred EEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 72 lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
|||||++|||+++|+.|+++|..+|++..|+. ..++..+++...+.++.++++|++|.++++++++.+.+.+++||+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 69999999999999999999933455556653 33444555544456788899999999999999999988899999999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------------
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG---------------- 214 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g---------------- 214 (1005)
||||+.....++.+.+.++|++++++|+.|++++.+.++|.|++.. ...++||++||+++..+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD-YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 9999864234567889999999999999999999999999975321 11578999999987432
Q ss_pred -------------------CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHH---
Q psy612 215 -------------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY--- 272 (1005)
Q Consensus 215 -------------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~--- 272 (1005)
..+...|+++|++...+++.+.++.. ...++++++|++|...++.|...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~ 238 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYH-EETGITFASLYPGCIATTGLFREHIPLFRLLFPP 238 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhc-ccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence 02456799999998888887776532 1235789999998775667754321111100
Q ss_pred HHh-cCCCCCCHHHHHHHHHHHHhc
Q psy612 273 FKS-SKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 273 ~~~-~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+.. ..-...+++++.+.+..++..
T Consensus 239 ~~~~~~~~~~~pe~~a~~~~~l~~~ 263 (308)
T PLN00015 239 FQKYITKGYVSEEEAGKRLAQVVSD 263 (308)
T ss_pred HHHHHhcccccHHHhhhhhhhhccc
Confidence 011 111247888888888776654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=194.67 Aligned_cols=220 Identities=16% Similarity=0.148 Sum_probs=165.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++++ .|+ ...+.+.+++...+.++..+.+|++|.++++++++++.+.+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVA-DINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 56899999999999999999999999865554 554 3344555666655667888999999999999999999999999
Q ss_pred ccEEEEcCcccCc--cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 146 IDGVLHIAGISGL--TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 146 idgvIh~AG~~~~--~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
+|+||||||+... ..++.+.+.++|++.+++|+.+++++.+++++.|.+ .+.++||++||.+++. +.+.|++
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~---~~~~Y~~ 157 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAK---RGGGAIVNQSSTAAWL---YSNFYGL 157 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hCCcEEEEEecccccC---CccccHH
Confidence 9999999998531 356778899999999999999999999999998643 3457899999987754 4578999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcC-CCCCCHHHHHHHHHHHHh
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~ 295 (1005)
+|++++.|++.++.+.. ..+++++++.+|.+............ .....+... ....++++..+.+..++.
T Consensus 158 sK~a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~ 229 (250)
T PRK07774 158 AKVGLNGLTQQLARELG--GMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS 229 (250)
T ss_pred HHHHHHHHHHHHHHHhC--ccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999887643 34568899999888643321111111 111122111 123467777777766554
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-20 Score=210.99 Aligned_cols=265 Identities=21% Similarity=0.237 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.-|..+++.+||+|||+++++++ +|++|+...++. + ...+..+...+|++. |++.|+++|+
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~----------~---~~~a~~v~~~lGl~~~~~~~~v~~~c~ 85 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE----------G---QNPARQAALLAGLPESVPATTVNRVCG 85 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC----------C---ChHHHHHHHHcCCCCCCchhhhccccH
Confidence 67889999999999999988887 677775443221 0 123556888999975 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH--H---H---------HHcCCCC--------------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI--A---M---------TSAGMLS-------------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~--~---~---------~~~~~ls-------------------- 673 (1005)
|++.||+.|+++|++|++|.+||+|++.+.. +.... . + ...+...
T Consensus 86 s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~ 165 (386)
T cd00751 86 SGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGI 165 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCC
Confidence 9999999999999999999999999875321 10000 0 0 0001000
Q ss_pred --------------------------------------------CCCCCcC-------------CC-----CCCCCceec
Q psy612 674 --------------------------------------------PDGKCYV-------------FD-----ERANGLVPS 691 (1005)
Q Consensus 674 --------------------------------------------~~g~~~p-------------fd-----~~a~G~~~g 691 (1005)
|+...|+ |+ ...|--.++
T Consensus 166 tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~ 245 (386)
T cd00751 166 SREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGIN 245 (386)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCC
Confidence 0000010 11 112223459
Q ss_pred CccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy612 692 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771 (1005)
Q Consensus 692 EGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~ 771 (1005)
||++++||++.+.|.+.+++++++|+|++.++++.. +...++..++++||++|||+|+||||+|.|.+.|.
T Consensus 246 dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~---- 316 (386)
T cd00751 246 DGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAA---- 316 (386)
T ss_pred cceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHH----
Confidence 999999999999999999999999999999887543 23446679999999999999999999999977762
Q ss_pred HHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccc
Q psy612 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 851 (1005)
Q Consensus 772 ~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~ 851 (1005)
.|+ ...+.|+-.. .++.+..-|...||+.+|+|+.++++++++|+.+
T Consensus 317 ~~~-~~~e~lg~~~---~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~----------------------------- 363 (386)
T cd00751 317 QAL-ACLKELGLDP---EKVNVNGGAIALGHPLGASGARIVVTLLHELKRR----------------------------- 363 (386)
T ss_pred HHH-HHHHHhCCCh---hhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc-----------------------------
Confidence 233 3334454221 1244555566789999999999999999999873
Q ss_pred cccccccCccEEEEcccCCCCceEEEEEec
Q psy612 852 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 852 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++.-+.||..+.+|||.
T Consensus 364 -------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 -------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred -------CCCEEEEEEcccccceEEEEEEC
Confidence 12678888889999999999983
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=224.66 Aligned_cols=218 Identities=12% Similarity=0.196 Sum_probs=176.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..+++.+++...+.++.++.||++|.++++++++++.+.+|++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999865555544444556666776667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccC--CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEA--NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~--t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
|+||||||... ...+.+. +.++|++++++|+.|++++.+.++|+|++ ...++||++||+++..+.++++.|+++
T Consensus 450 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~s 525 (657)
T PRK07201 450 DYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRE---RRFGHVVNVSSIGVQTNAPRFSAYVAS 525 (657)
T ss_pred CEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh---cCCCEEEEECChhhcCCCCCcchHHHH
Confidence 99999999865 3344333 36889999999999999999999998643 356799999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
|++++.|++.++.+.. ..++++++|.+|.+. +.|...... . .....++++++++.+...+..+.
T Consensus 526 K~a~~~~~~~la~e~~--~~~i~v~~v~pg~v~-T~~~~~~~~-----~--~~~~~~~~~~~a~~i~~~~~~~~ 589 (657)
T PRK07201 526 KAALDAFSDVAASETL--SDGITFTTIHMPLVR-TPMIAPTKR-----Y--NNVPTISPEEAADMVVRAIVEKP 589 (657)
T ss_pred HHHHHHHHHHHHHHHH--hhCCcEEEEECCcCc-ccccCcccc-----c--cCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999999999888754 345688999998875 455432110 1 12346899999999988776543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=196.09 Aligned_cols=222 Identities=16% Similarity=0.155 Sum_probs=165.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-C-CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-N-NKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+..++..+++... + ..+.++.||++|++++.++++++.+.++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999987555544334445555566432 2 3466779999999999999999999999
Q ss_pred CccEEEEcCcccCc--cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 145 PIDGVLHIAGISGL--TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 145 ~idgvIh~AG~~~~--~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
++|+||||||.... ...+.+.+.++|+.++++|+.+++.+.++++|.|++ .+.++||++||+++..+.
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~~~ 159 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK---QGGGNLVNISSIYGVVAPKFEIYEG 159 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh---cCCceEEEEechhhhccccchhccc
Confidence 99999999986431 246788899999999999999999999999999753 345689999998876432
Q ss_pred ---CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHH-hcCCCCCCHHHHHHHHH
Q psy612 216 ---FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 216 ---~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g~~~l~~~~~~~~l~ 291 (1005)
.....|+++|+++.+|++.++.+.. ..++++++|.+|...+. +. ......... ......+++++..+.+.
T Consensus 160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~v~~i~Pg~~~~~-~~---~~~~~~~~~~~~~~~~~~~~dva~~~~ 233 (256)
T PRK09186 160 TSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIRVNCVSPGGILDN-QP---EAFLNAYKKCCNGKGMLDPDDICGTLV 233 (256)
T ss_pred cccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeEEEEEecccccCC-CC---HHHHHHHHhcCCccCCCCHHHhhhhHh
Confidence 1234799999999999998888753 34568888888765432 11 010111111 12234688999999888
Q ss_pred HHHhcc
Q psy612 292 QLLIQD 297 (1005)
Q Consensus 292 ~~l~~~ 297 (1005)
.++...
T Consensus 234 ~l~~~~ 239 (256)
T PRK09186 234 FLLSDQ 239 (256)
T ss_pred heeccc
Confidence 887643
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=206.16 Aligned_cols=265 Identities=19% Similarity=0.210 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.-|+.+++.+||+|||+++++++ .|++|+...... .. ..+..++..+|+.+ |+++|+++|+
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~~------------~~-~~a~~va~~lGl~~~~p~~~V~~~Ca 89 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAGA------------GQ-NPARQAAIKAGLPHSVPAMTLNKVCG 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCCC------------CC-cHHHHHHHHcCCCCCcceEEecccch
Confidence 56789999999999999998887 788886542110 01 14456889999974 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---------------HHHH-----HHH--cCCC-------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIA-----MTS--AGML------------- 672 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---------------~~~~-----~~~--~~~l------------- 672 (1005)
|++.|++.|++.|++|++|.+||+|++.+.. |. .... +.. .+..
T Consensus 90 sg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g 169 (393)
T PRK05656 90 SGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYG 169 (393)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999985432 10 0000 000 0110
Q ss_pred -C-------------------CCCCCc----CCCC--------------------------------CCCCce-------
Q psy612 673 -S-------------------PDGKCY----VFDE--------------------------------RANGLV------- 689 (1005)
Q Consensus 673 -s-------------------~~g~~~----pfd~--------------------------------~a~G~~------- 689 (1005)
+ +++.-+ |+.. ..+|.+
T Consensus 170 itre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~ 249 (393)
T PRK05656 170 ISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASS 249 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCC
Confidence 0 223221 1110 023556
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||++.+.|.+.|.+|++.|.|++.... -..+...+...+++++|++||++|+||||+|.|.+
T Consensus 250 ~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~----- 319 (393)
T PRK05656 250 LNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA----- 319 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc-----
Confidence 89999999999999999999999999999987642 12234456788999999999999999999999986
Q ss_pred CHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccc
Q psy612 770 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 849 (1005)
Q Consensus 770 D~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~ 849 (1005)
+++|..++.+.|+-.. .++.+.+-|..+||+.+|+|+..++.++.+|+..
T Consensus 320 f~~~~~~~~e~lg~~~---~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~--------------------------- 369 (393)
T PRK05656 320 FAAQSLAVGKELGWDA---AKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR--------------------------- 369 (393)
T ss_pred cHHHHHHHHHHhCCCC---ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHc---------------------------
Confidence 6688889889997432 3467889999999999999999999999877641
Q ss_pred cccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 850 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 850 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++.-.-||.-..+|||.
T Consensus 370 ---------~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 370 ---------DAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred ---------CCCEEEEEEcccCcceEEEEEec
Confidence 23677777777888888999884
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-19 Score=192.87 Aligned_cols=221 Identities=17% Similarity=0.199 Sum_probs=171.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+++++||||+||||+.+|++|+++|+.++++.++.. ..++..+++...+.++.++.+|++|.++++++++.+.+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998666543322 223344555566778999999999999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHH-HHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE-NTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~-~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++++|+||||||... ...+.+.+.++|++.+++|+.|++++.+++. +.| .+...++||++||..+..+.+++..|
T Consensus 85 ~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~~iv~~sS~~~~~~~~~~~~y 160 (249)
T PRK12827 85 FGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMI---RARRGGRIVNIASVAGVRGNRGQVNY 160 (249)
T ss_pred hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH---hcCCCeEEEEECCchhcCCCCCCchh
Confidence 999999999999877 6788889999999999999999999999998 543 33456789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCC-CHHHHHHHHHHHHh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVL-HENDGLKLFEQLLI 295 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l-~~~~~~~~l~~~l~ 295 (1005)
+++|++++.+++.++.+.. ..++++++|.+|... +++...... .....+......+ ++++..+.+..++.
T Consensus 161 ~~sK~a~~~~~~~l~~~~~--~~~i~~~~i~pg~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~ 231 (249)
T PRK12827 161 AASKAGLIGLTKTLANELA--PRGITVNAVAPGAIN-TPMADNAAP-TEHLLNPVPVQRLGEPDEVAALVAFLVS 231 (249)
T ss_pred HHHHHHHHHHHHHHHHHhh--hhCcEEEEEEECCcC-CCcccccch-HHHHHhhCCCcCCcCHHHHHHHHHHHcC
Confidence 9999999999998877632 335688888877664 444332211 1112222333333 78888887777664
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=193.28 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=166.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.+|+.. .++.. ...+.++.++++|++|++++.++++++.+.+|+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA---DELGDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999987766665432 12222 223457889999999999999999999998987
Q ss_pred -ccEEEEcCcccC-----ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 146 -IDGVLHIAGISG-----LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 146 -idgvIh~AG~~~-----~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|+||||||+.. ...++.+.+.++|++++++|+.|++++.+++.|.|++ ...+.||++||..+..+..+..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~iss~~~~~~~~~~~ 157 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMRE---QGFGRIINIGTNLFQNPVVPYH 157 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHh---cCCeEEEEECCccccCCCCCcc
Confidence 999999998742 0245788899999999999999999999999998643 3457899999988776667788
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
.|+++|++++.|++.++.+.. ..++++.+|.+|......+........ ....+...+ ...++++....+..++..
T Consensus 158 ~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 234 (253)
T PRK08642 158 DYTTAKAALLGLTRNLAAELG--PYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASP 234 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhC--ccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence 999999999999999987744 345688888877665432221111111 111111122 346788888888877753
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=192.84 Aligned_cols=223 Identities=16% Similarity=0.194 Sum_probs=173.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||.+++++|+++|++++++..|+ +..++..+.+...+.++.++.+|++|++++.++++.+.+.+++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 368999999999999999999999998876663554 3444555556555677899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+|||+||... ...+.+.+.++|++.+++|+.|++++.+.+.+.++ +.+.++||++||..+..+.+++..|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 84 IDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMI---KRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH---hcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 999999999875 67788889999999999999999999999999864 33467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-H-hcCCCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-K-SSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~-~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++++|.+|.+. +++...........+ . .......++++..+.+..++..
T Consensus 160 ~a~~~~~~~~~~~~~--~~gi~~~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 229 (247)
T PRK05565 160 GAVNAFTKALAKELA--PSGIRVNAVAPGAID-TEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASD 229 (247)
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEEECCcc-CccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence 999999988877633 345688899888664 333322111111101 1 1112235677777777776654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-19 Score=193.95 Aligned_cols=186 Identities=19% Similarity=0.168 Sum_probs=154.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-- 143 (1005)
.+++++||||+||||.++|++|+++|++++++..|+. ..++..+.+...+.++.++.+|++|++++.++++++.+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3689999999999999999999999998777666653 3344445555556678899999999999999999998877
Q ss_pred ----CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 144 ----GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 144 ----g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+++|+||||||... ...+.+.+.+.|+.++++|+.|++++.+++.+.|++ .++||++||..+..+.++++
T Consensus 85 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~v~~sS~~~~~~~~~~~ 158 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-----EGRVINISSAEVRLGFTGSI 158 (254)
T ss_pred ccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-----CCEEEEECCHHhcCCCCCCc
Confidence 57999999999876 677888999999999999999999999999988632 36899999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
.|+++|++++.|++.++.+.. ..+++++++.+|.. .+.|
T Consensus 159 ~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~v~pg~~-~t~~ 197 (254)
T PRK12746 159 AYGLSKGALNTMTLPLAKHLG--ERGITVNTIMPGYT-KTDI 197 (254)
T ss_pred chHhhHHHHHHHHHHHHHHHh--hcCcEEEEEEECCc-cCcc
Confidence 999999999999998877633 23457777765544 4444
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=196.80 Aligned_cols=186 Identities=17% Similarity=0.237 Sum_probs=158.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|+++||||+||||..++++|+++|+++|+++.|+. ......+++.+.+.++.++.+|+++++++.++++.+.+.+|+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999998666666653 334455566666778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ...+.+.+.++|+.++++|+.|++++.+++++.|++ ....++||++||.++..+.++...|+++|
T Consensus 85 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 161 (260)
T PRK06198 85 LDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRR--RKAEGTIVNIGSMSAHGGQPFLAAYCASK 161 (260)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCCEEEEECCcccccCCCCcchhHHHH
Confidence 999999999876 677888999999999999999999999999998743 22357999999999988889999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+++++|++.++.+.. ..++++.+|.+|...
T Consensus 162 ~a~~~~~~~~a~e~~--~~~i~v~~i~pg~~~ 191 (260)
T PRK06198 162 GALATLTRNAAYALL--RNRIRVNGLNIGWMA 191 (260)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeecccc
Confidence 999999998887644 334577777766553
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=197.49 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=163.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHh-CCCcEEEEEecCCCHHHH----HHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKM----ISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v----~~~~~~i~~~ 142 (1005)
++++||||++|||+++++.|+++|+.++++.+|+ +..++..+++.. .+.++.++.+|++|++++ +++++.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5899999999999999999999999776665554 344455555643 355778899999999865 5566666778
Q ss_pred cCCccEEEEcCcccCccchhccCCH-----------HHHHHHHhhhhhHHHHHHHHHHHHHHHHh---cCCCcEEEEecC
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANY-----------KNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSS 208 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~-----------~~~~~~l~~kv~g~~~L~~~~~~~l~~~~---~~~~~~iV~~SS 208 (1005)
+|++|+||||||+.. ..++.+.+. ++|.+++++|+.+++++.+++.|+|++.. ....+.||++||
T Consensus 82 ~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 82 FGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred cCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 899999999999865 444444333 36999999999999999999999875321 122467999999
Q ss_pred cccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc-CcccccccchhhhHHHHhcCC--CCCCHHH
Q psy612 209 SSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN-NSKFKIGNNEQTDFYFKSSKQ--KVLHEND 285 (1005)
Q Consensus 209 ia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~-~~Gm~~~~~~~~~~~~~~~g~--~~l~~~~ 285 (1005)
..+..+.++...|+++|+++.+|++.++.+.. ..++++.+|.+|... ...|.. .......+...+ ...++++
T Consensus 161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T TIGR02685 161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELA--PLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRKVPLGQREASAEQ 235 (267)
T ss_pred hhccCCCcccchhHHHHHHHHHHHHHHHHHHh--hhCeEEEEEecCCccCccccch---hHHHHHHHhCCCCcCCCCHHH
Confidence 99988889999999999999999999888743 344688899887652 122321 111111122222 3468899
Q ss_pred HHHHHHHHHhc
Q psy612 286 GLKLFEQLLIQ 296 (1005)
Q Consensus 286 ~~~~l~~~l~~ 296 (1005)
..+.+..++..
T Consensus 236 va~~~~~l~~~ 246 (267)
T TIGR02685 236 IADVVIFLVSP 246 (267)
T ss_pred HHHHHHHHhCc
Confidence 99998887754
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=192.97 Aligned_cols=185 Identities=12% Similarity=0.184 Sum_probs=156.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+|+||++++++|+++|++++++.++.+...++.+.++..+.++.++.+|++|.++++++++.+.+.++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865555444444445556666667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++++|+.+++++.+++.+.|++ .+.++||++||.++..+.++...|+++|+
T Consensus 82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~ii~iss~~~~~~~~~~~~Y~~sK~ 157 (250)
T TIGR03206 82 DVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVE---RGAGRIVNIASDAARVGSSGEAVYAACKG 157 (250)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCeEEEEECchhhccCCCCCchHHHHHH
Confidence 99999999876 677888899999999999999999999999998643 34678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+++.|++.++.+.. ..+++++.+.+|.+.
T Consensus 158 a~~~~~~~la~~~~--~~~i~v~~v~pg~~~ 186 (250)
T TIGR03206 158 GLVAFSKTMAREHA--RHGITVNVVCPGPTD 186 (250)
T ss_pred HHHHHHHHHHHHHh--HhCcEEEEEecCccc
Confidence 99999998877643 224577888877654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=217.17 Aligned_cols=221 Identities=10% Similarity=0.093 Sum_probs=167.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++. .++.+.++.++++|++|+++++++++.+.+++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARER---ADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999998655544433333332 33346678889999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||+..+ ..++.+.+.++|++++++|+.|++++.++++|+|++ ....+.||++||.++..+.++...|+++|
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~~iv~isS~~~~~~~~~~~~Y~asK 158 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIE--QGHGAAIVNVASGAGLVALPKRTAYSASK 158 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCCeEEEECCcccCCCCCCCchHHHHH
Confidence 999999998431 356788999999999999999999999999999753 22334899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh----hhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ----TDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~----~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++++|.+|... +.|....... .......... ...++++....+..++.
T Consensus 159 aal~~l~~~la~e~~--~~~i~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~ 230 (520)
T PRK06484 159 AAVISLTRSLACEWA--AKGIRVNAVLPGYVR-TQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS 230 (520)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEccCCcC-chhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999988743 345688899877653 3332211000 0111111111 23477777777776654
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-19 Score=195.59 Aligned_cols=179 Identities=15% Similarity=0.157 Sum_probs=149.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.|++|||||+||||++++++|+++|++++++. |+.. ..+.+. ..+.++.++++|++|.+++.++++++.+.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~-r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATV-RRPD---ALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEe-CCHH---HHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 37899999999999999999999998655554 4421 122222 234578899999999999999999998999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... .....+.+.++|++++++|+.|++++.++++|+|+ ....++||++||..+..+.++.+.|+++|+
T Consensus 78 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 153 (276)
T PRK06482 78 DVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR---RQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153 (276)
T ss_pred CEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---hcCCCEEEEEcCcccccCCCCCchhHHHHH
Confidence 99999999887 67778889999999999999999999999999864 345678999999999888999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+++.|+++++.+.. ..+++++.+.+|..
T Consensus 154 a~~~~~~~l~~~~~--~~gi~v~~v~pg~~ 181 (276)
T PRK06482 154 GIEGFVEAVAQEVA--PFGIEFTIVEPGPA 181 (276)
T ss_pred HHHHHHHHHHHHhh--ccCcEEEEEeCCcc
Confidence 99999998876632 23458888888765
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=190.80 Aligned_cols=226 Identities=19% Similarity=0.186 Sum_probs=188.0
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+.++||||++|||+++|..+..+|+.+-++.+......+..+.++-. -..|.+.++|++|.+++..+++++.+..|+
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 378999999999999999999999998777766666666666666422 234889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|.+|||||+.- .+.+.+.+.++++..+++|..|+++.+++.++.|++ ..+.|+|+++||.++.+|..|+++|+++|
T Consensus 113 ~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~--~~~~g~I~~vsS~~a~~~i~GysaYs~sK 189 (331)
T KOG1210|consen 113 IDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKK--REHLGRIILVSSQLAMLGIYGYSAYSPSK 189 (331)
T ss_pred cceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhc--cccCcEEEEehhhhhhcCcccccccccHH
Confidence 999999999998 899999999999999999999999999999999864 23456999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh-HHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++.+|++.++++.. ..++.+....++.....|+..++...-. ...-..+-..+.+++...++..-+.++.
T Consensus 190 ~alrgLa~~l~qE~i--~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 190 FALRGLAEALRQELI--KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred HHHHHHHHHHHHHHh--hcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhcC
Confidence 999999999999966 5577888888888888888665432211 1122334456889999888877666553
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-19 Score=193.11 Aligned_cols=225 Identities=15% Similarity=0.137 Sum_probs=171.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+++++||||+||||+++++.|+++|++++++.++.+..+++..+++..+.++.++.+|+++++++.++++++.+.++++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999865555444444455666666666778999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc-----CCCcEEEEecCcccccCCCCChhh
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK-----NKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~-----~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
|+||||||... ...+.+.+.++|+.++++|+.|++++.+++.|.|..... ...+.||++||..+..+.++...|
T Consensus 88 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 88 DILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 99999999876 677888899999999999999999999999998754221 114689999999998888889999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcC-CCCCCHHHHHHHHHHHHh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSK-QKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~ 295 (1005)
+++|+++..|++.++.+.. ..++++++|.+|... +.|.... ........+... ...-.+++..+.+..++.
T Consensus 167 ~~sK~a~~~~~~~la~~~~--~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~ 240 (258)
T PRK06949 167 CMSKAAVVHMTRAMALEWG--RHGINVNAICPGYID-TEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAA 240 (258)
T ss_pred HHHHHHHHHHHHHHHHHHH--hcCeEEEEEeeCCCc-CCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999998877632 334688888887664 3332211 111111111112 134456777777776655
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=197.29 Aligned_cols=209 Identities=16% Similarity=0.116 Sum_probs=155.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++||||+ +|||+++|++|+ +|++++++.++.+..++..++++..+.++.+++||++|++++.++++.+ +++|+||
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence 579999998 699999999996 7876555543334445556667666778999999999999999999988 5689999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC------------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------ 215 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------------ 215 (1005)
+||||||+.. +.++|++++++|+.|++++.+++.|+|++ .+.+|++||+++..+.
T Consensus 79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~g~iv~isS~~~~~~~~~~~~~~~~~~~ 145 (275)
T PRK06940 79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP-----GGAGVVIASQSGHRLPALTAEQERALAT 145 (275)
T ss_pred EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh-----CCCEEEEEecccccCcccchhhhccccc
Confidence 9999999753 23679999999999999999999998642 2568999999887652
Q ss_pred ------------------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-c----hhhhHH
Q psy612 216 ------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N----EQTDFY 272 (1005)
Q Consensus 216 ------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~----~~~~~~ 272 (1005)
.++..|+++|+++..|+++++.+.. ..++++.+|++|.. ++.|.... . ......
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gIrvn~i~PG~v-~T~~~~~~~~~~~~~~~~~~ 222 (275)
T PRK06940 146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG--ERGARINSISPGII-STPLAQDELNGPRGDGYRNM 222 (275)
T ss_pred cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc--cCCeEEEEeccCcC-cCccchhhhcCCchHHHHHH
Confidence 2578899999999999999887643 45678999998866 44453211 0 001111
Q ss_pred HHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 273 FKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 273 ~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.+...+ +..++++....+..++.
T Consensus 223 ~~~~p~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 223 FAKSPAGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred hhhCCcccCCCHHHHHHHHHHHcC
Confidence 112122 34578888888877664
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=202.17 Aligned_cols=189 Identities=14% Similarity=0.107 Sum_probs=148.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||+||||+++|+.|+++|+++++ ++|+ +..++..+++... +.++.++.+|++|.++++++++++.+.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVL-AVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5799999999999999999999999986544 4554 3334444555432 4578899999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------- 213 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---------- 213 (1005)
+++|+||||||+.. . ....+.+.|+..+++|+.|++.+.+.++|.|++ .+.++||++||.++..
T Consensus 94 ~~iD~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~---~~~~~iV~vSS~~~~~~~~~~~~~~~ 167 (306)
T PRK06197 94 PRIDLLINNAGVMY-T--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLP---VPGSRVVTVSSGGHRIRAAIHFDDLQ 167 (306)
T ss_pred CCCCEEEECCcccc-C--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh---CCCCEEEEECCHHHhccCCCCccccC
Confidence 99999999999865 2 235677889999999999999999999998643 3457899999987654
Q ss_pred ---CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc
Q psy612 214 ---GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 263 (1005)
Q Consensus 214 ---g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~ 263 (1005)
+..+...|+++|+++..|++.++.+....+.++.++++++|.. .+.|..
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v-~T~~~~ 219 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVS-NTELAR 219 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcc-cCcccc
Confidence 1235678999999999999998877543444556667777755 455644
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-19 Score=194.31 Aligned_cols=224 Identities=17% Similarity=0.149 Sum_probs=169.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||+||||.+++++|+++|+++ +++.|+ +..+...+++... +.++.++.+|++|++++.++++++.+++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAV-MIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeE-EEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999864 445554 3344455555543 3578889999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
+++|+||||||......++.+.+.++|..++++|+.+++.+.+++.+.|.+ ...++||++||+.+..+.++.+.|++
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~~sS~~~~~~~~~~~~Y~~ 161 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR---GGGGSFVGISSIAASNTHRWFGAYGV 161 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEechhhcCCCCCCcchHH
Confidence 999999999997642456778899999999999999999999999888642 34578999999999888888999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh--h-hHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--T-DFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~-~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|++++.+++.++.+.. ..+++++.|.+|.. ++.|....... . ........ .....+++..+.+..++..+
T Consensus 162 sK~a~~~~~~~~~~~~~--~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 236 (276)
T PRK05875 162 TKSAVDHLMKLAADELG--PSWVRVNSIRPGLI-RTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA 236 (276)
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEecCcc-CCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999999877643 34568888887755 33333211110 0 01111111 12236788888887776543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=201.55 Aligned_cols=221 Identities=13% Similarity=0.057 Sum_probs=155.4
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHH---------H-HHHHhCCC-----cEEEEEecCCCH
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSII---------Y-KKLKKFNN-----KAIYIQVDVSDK 129 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~---------~-~~l~~~g~-----~v~~~~~Dvtd~ 129 (1005)
.+|++||||++ +|||+++|+.|+++|+++++.... +..... . ......|. ++..+.+|+++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 68999999996 999999999999999988775422 111000 0 00001111 111122333333
Q ss_pred ------------------HHHHHHHHHHHhhcCCccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 130 ------------------LKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 130 ------------------~~v~~~~~~i~~~~g~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
++++++++++.++||+||+||||||.... ..++.+++.++|++++++|+.|+++++++++|
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46899999999999999999999987531 46788999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEecCcccccCCCCCh-hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--ch
Q psy612 191 TILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NE 267 (1005)
Q Consensus 191 ~l~~~~~~~~~~iV~~SSia~~~g~~g~~-~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~ 267 (1005)
+|++ .+.||++||+++..+.+++. .|+++|+++.+|++.++.+... ..++++.+|.+|.... .|.... ..
T Consensus 166 ~m~~-----~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~-~~gIrVn~V~PG~v~T-~~~~~~~~~~ 238 (299)
T PRK06300 166 IMNP-----GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGR-RWGIRVNTISAGPLAS-RAGKAIGFIE 238 (299)
T ss_pred Hhhc-----CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEEEEeCCccC-hhhhcccccH
Confidence 9742 36799999999999988875 8999999999999999988531 2367889999887643 332211 01
Q ss_pred hh-hHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 268 QT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 268 ~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.. ........+ +..++++....+..++.
T Consensus 239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s 268 (299)
T PRK06300 239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVS 268 (299)
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 11 111111111 34568888877777654
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-21 Score=181.89 Aligned_cols=218 Identities=15% Similarity=0.117 Sum_probs=165.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++++||+..|||+++++.|++.|+++|.+.+....+ ....+...+.+..+..|+++++.+.+++. ..++|
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L---~sLV~e~p~~I~Pi~~Dls~wea~~~~l~----~v~pi 78 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANL---LSLVKETPSLIIPIVGDLSAWEALFKLLV----PVFPI 78 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHH---HHHHhhCCcceeeeEecccHHHHHHHhhc----ccCch
Confidence 688999999999999999999999999766665544333 33333445568889999999887776664 45799
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+++||||+.. ..+|.++|.++|++.|++|+++.+++.+...+.+ ......|.||++||.++..+..+.+.||++|+
T Consensus 79 dgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~l--v~R~~~GaIVNvSSqas~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 79 DGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNL--VDRQIKGAIVNVSSQASIRPLDNHTVYCATKA 155 (245)
T ss_pred hhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhh--hhccCCceEEEecchhcccccCCceEEeecHH
Confidence 99999999998 8999999999999999999999999999876654 33445678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh---HHHHhcCCCCC-CHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSKQKVL-HENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g~~~l-~~~~~~~~l~~~l~~~ 297 (1005)
+||.+++.++.+. +...+++.++|+... -+.|..++...-. .++.+..+..+ ..+|...++..+|+..
T Consensus 156 ALDmlTk~lAlEL--Gp~kIRVNsVNPTVV-mT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 156 ALDMLTKCLALEL--GPQKIRVNSVNPTVV-MTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred HHHHHHHHHHHhh--CcceeEeeccCCeEE-EecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecC
Confidence 9999999998874 356678889987654 3456655433221 22333333222 2355555555555443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=188.84 Aligned_cols=184 Identities=18% Similarity=0.272 Sum_probs=155.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||++++++|+++|++++++.++... .+...++++..+.++.++.+|+++++++.++++++.+.+++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999987666665542 34555566666778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+|||+||... ...+.+.+.+.|++.+.+|+.+++++.+++.+.+.+ .+.+.||++||.++..|.++...|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~v~iss~~~~~~~~~~~~y~~sk 159 (248)
T PRK05557 84 VDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMK---QRSGRIINISSVVGLMGNPGQANYAASK 159 (248)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCeEEEEEcccccCcCCCCCchhHHHH
Confidence 999999999877 667778899999999999999999999999998542 3456799999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
++++.+++.++.+.. ..++++..|.+|.+
T Consensus 160 ~a~~~~~~~~a~~~~--~~~i~~~~v~pg~~ 188 (248)
T PRK05557 160 AGVIGFTKSLARELA--SRGITVNAVAPGFI 188 (248)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEecCcc
Confidence 999999888766532 33457888887765
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=190.50 Aligned_cols=183 Identities=17% Similarity=0.147 Sum_probs=157.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC--
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG-- 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g-- 144 (1005)
++|.++|||.-+|+|+.+|++|.++|.+++.-+-.++..+.+..+.+ ..+...++.|||++++++++.+.+++..+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 67899999999999999999999999998888844444444444443 46778889999999999999998887643
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++-+||||||+....++.+=.+.++|++++++|+.|++.+++.++|++++ ..|+||++||+.|..+.|+-+.|+++
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~----arGRvVnvsS~~GR~~~p~~g~Y~~S 181 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR----ARGRVVNVSSVLGRVALPALGPYCVS 181 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh----ccCeEEEecccccCccCcccccchhh
Confidence 59999999998765777788899999999999999999999999999765 45789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|.++++|+..+|++.. ..++.+..|.+|...
T Consensus 182 K~aVeaf~D~lR~EL~--~fGV~VsiiePG~f~ 212 (322)
T KOG1610|consen 182 KFAVEAFSDSLRRELR--PFGVKVSIIEPGFFK 212 (322)
T ss_pred HHHHHHHHHHHHHHHH--hcCcEEEEeccCccc
Confidence 9999999999999865 566788888887553
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.8e-19 Score=190.13 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=172.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||++++++|+++|+++++..+++ .........++..+.++.++.+|+++++++.++++++.+.+++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999866655544 2333444556666778889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+.+.+.|++.+++|+.|.+++.+++.++|++ .+.||++||.++..+.+++..|+++|
T Consensus 85 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (252)
T PRK06077 85 ADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-----GGAIVNIASVAGIRPAYGLSIYGAMK 158 (252)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-----CcEEEEEcchhccCCCCCchHHHHHH
Confidence 999999999876 667788899999999999999999999999998642 36899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----hhhHHHHh-c-CCCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFKS-S-KQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~~-~-g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. . ++++..+.+|.+. +.|...... ......+. . ....+.+++..+.+..++..
T Consensus 159 ~~~~~~~~~l~~~~~--~-~i~v~~v~Pg~i~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 231 (252)
T PRK06077 159 AAVINLTKYLALELA--P-KIRVNAIAPGFVK-TKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI 231 (252)
T ss_pred HHHHHHHHHHHHHHh--c-CCEEEEEeeCCcc-ChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc
Confidence 999999999888743 2 4678888887664 333211000 00011111 0 11347888998888888753
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=190.30 Aligned_cols=218 Identities=14% Similarity=0.076 Sum_probs=167.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCC--HHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSD--KLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd--~~~v~~~~~~i~~~~ 143 (1005)
++++++||||+||||++++++|+++|++++++.++.+..++..+++.+.+ ..+.++++|+++ .+++.++++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 46899999999999999999999999875554443344455556665443 467788999986 578999999998888
Q ss_pred -CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 144 -GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 144 -g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
+++|+||||||......++.+.+.++|++.+++|+.|++++.++++|.|++ .+.+.||++||..+..+.++...|+
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~---~~~~~iv~~ss~~~~~~~~~~~~Y~ 161 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ---SPDASVIFVGESHGETPKAYWGGFG 161 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh---CCCCEEEEEeccccccCCCCccchH
Confidence 899999999998643467888999999999999999999999999998643 3457899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
++|++++.|++.++.+.... .+++++.|.+|......+ ........ .....++++....+.+++.
T Consensus 162 ~sKaa~~~~~~~la~e~~~~-~~i~v~~v~pG~v~t~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 162 ASKAALNYLCKVAADEWERF-GNLRANVLVPGPINSPQR-IKSHPGEA------KSERKSYGDVLPAFVWWAS 226 (239)
T ss_pred HhHHHHHHHHHHHHHHhccC-CCeEEEEEecCcccCccc-cccCCCCC------ccccCCHHHHHHHHHHHhC
Confidence 99999999999988774311 246888998887754322 11100000 0123577788877777765
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=193.36 Aligned_cols=182 Identities=15% Similarity=0.169 Sum_probs=146.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||.+++++|+++|++++++.++....++..+++ +. .++++|++++++++++++++.+.++++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---GG--LFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--cEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999987555544332222222222 22 578999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhhHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Yaaa 224 (1005)
|+||||||...+ ..++.+.+.+.|++.+++|+.|++++++.++|+|++ ...++||++||..+..|.+ ++..|+++
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~g~iv~~sS~~~~~g~~~~~~~Y~~s 157 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVR---QGKGSIINTASFVAVMGSATSQISYTAS 157 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHH---hCCcEEEEEcchhhccCCCCCCcchHHH
Confidence 999999997641 245678899999999999999999999999998753 2457899999998888764 78899999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|++++.+++.++.+.. ..++++.+|.+|.+..
T Consensus 158 Kaal~~~~~~l~~~~~--~~gi~v~~i~pg~v~t 189 (255)
T PRK06057 158 KGGVLAMSRELGVQFA--RQGIRVNALCPGPVNT 189 (255)
T ss_pred HHHHHHHHHHHHHHHH--hhCcEEEEEeeCCcCC
Confidence 9999999998776643 2356888998877753
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-19 Score=189.75 Aligned_cols=209 Identities=12% Similarity=0.059 Sum_probs=161.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+||||++++++|+++|++++ ++.|++ +..+++...+.++.+++||++|+++++++++++.. .+|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~-~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~ 74 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVI-ACGRNQ---SVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---IPEL 74 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEE-EEECCH---HHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence 7899999999999999999999998754 455543 22333444455688999999999999999988643 4799
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
+|||||... .....+.+.++|++++++|+.|++++.+++.|+|+ +.++||++||+++..+.+++..|+++|+++
T Consensus 75 ~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 148 (240)
T PRK06101 75 WIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS-----CGHRVVIVGSIASELALPRAEAYGASKAAV 148 (240)
T ss_pred EEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCeEEEEechhhccCCCCCchhhHHHHHH
Confidence 999999754 33445678999999999999999999999999863 246799999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
++|++.++.+.. ..++++++|.+|.+. +.|...... ..-..++++++.+.+...+..+.+.+
T Consensus 149 ~~~~~~l~~e~~--~~gi~v~~v~pg~i~-t~~~~~~~~--------~~~~~~~~~~~a~~i~~~i~~~~~~~ 210 (240)
T PRK06101 149 AYFARTLQLDLR--PKGIEVVTVFPGFVA-TPLTDKNTF--------AMPMIITVEQASQEIRAQLARGKSHI 210 (240)
T ss_pred HHHHHHHHHHHH--hcCceEEEEeCCcCC-CCCcCCCCC--------CCCcccCHHHHHHHHHHHHhcCCCEE
Confidence 999998876533 234588888776664 445322110 01124789999999999998776543
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-19 Score=190.97 Aligned_cols=177 Identities=15% Similarity=0.172 Sum_probs=152.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+.++++|+++|++++++.++ . +...+.++.++++|+++++++.++++++.++++++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~-~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA-F--------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc-h--------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999876655443 2 23345678899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.+++++.+++.++|++ ...++||++||..+..+.++.+.|+++|+
T Consensus 78 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 78 DVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRR---QRSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---CCCCEEEEECCchhccCCCCCchhHHHHH
Confidence 99999999876 677888899999999999999999999999998643 34578999999999988899999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+++.|+++++.+.. ..++++.+|.+|...+
T Consensus 154 a~~~~~~~la~e~~--~~~i~v~~i~pg~v~t 183 (252)
T PRK08220 154 ALTSLAKCVGLELA--PYGVRCNVVSPGSTDT 183 (252)
T ss_pred HHHHHHHHHHHHhh--HhCeEEEEEecCcCcc
Confidence 99999999887743 3456888888776643
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=195.46 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=148.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+||||+++++.|+++|+++++ +.|+... ..+.++.+++||++|+++++++++++.+.++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~-~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVT-TARSRPD--------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEE-EeCChhh--------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999987554 4554321 123468889999999999999999999999999
Q ss_pred cEEEEcCcccC-ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhhHH
Q psy612 147 DGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~-~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Yaaa 224 (1005)
|+||||||... ....+.+.+.++|++.+++|+.|++.+.+.++|+|++ ...+.||++||+.+..+.+ +...|+++
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~ii~isS~~~~~~~~~~~~~Y~~s 155 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA---RGSGVIIHVTSIQRRLPLPESTTAYAAA 155 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh---cCCcEEEEEecccccCCCCCCcchhHHH
Confidence 99999999753 1356778899999999999999999999999999753 3457899999999988865 88999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.|++.++.+.. ..++++.+|.+|...
T Consensus 156 K~a~~~l~~~~a~~~~--~~gi~v~~i~Pg~v~ 186 (260)
T PRK06523 156 KAALSTYSKSLSKEVA--PKGVRVNTVSPGWIE 186 (260)
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEecCccc
Confidence 9999999999887643 345688899887664
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.6e-19 Score=190.20 Aligned_cols=213 Identities=16% Similarity=0.084 Sum_probs=169.0
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++||||+||||++++++|+++|++++++.++.+..++..+++... +.++.+++||++|+++++++++++.+ .+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence 68999999999999999999999986555544333334444555443 46789999999999999999998765 469
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ...+.+.+.+++.+.+++|+.|++++.+++.|+|+ +.+.++||++||+.+..+.++...|+++|++
T Consensus 79 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 154 (243)
T PRK07102 79 IVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFE---ARGSGTIVGISSVAGDRGRASNYVYGSAKAA 154 (243)
T ss_pred EEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH---hCCCCEEEEEecccccCCCCCCcccHHHHHH
Confidence 9999999876 66778889999999999999999999999999864 3346789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
++.|++.++.+.. ..++++++|.++.+. +.|.... ...+...+++++..+.+.+.+..+..
T Consensus 155 ~~~~~~~l~~el~--~~gi~v~~v~pg~v~-t~~~~~~--------~~~~~~~~~~~~~a~~i~~~~~~~~~ 215 (243)
T PRK07102 155 LTAFLSGLRNRLF--KSGVHVLTVKPGFVR-TPMTAGL--------KLPGPLTAQPEEVAKDIFRAIEKGKD 215 (243)
T ss_pred HHHHHHHHHHHhh--ccCcEEEEEecCccc-Chhhhcc--------CCCccccCCHHHHHHHHHHHHhCCCC
Confidence 9999998876633 345688899887664 3442211 11233467899999999998887654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=194.61 Aligned_cols=212 Identities=14% Similarity=0.081 Sum_probs=167.3
Q ss_pred CCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhc-CCccEEE
Q psy612 75 GGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNI-GPIDGVL 150 (1005)
Q Consensus 75 Gg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~idgvI 150 (1005)
|++ +|||+++|+.|+++|+++++..++.+..+...+++.+ .+.+ ++.||++++++++++++++.+.+ |+||++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 556 9999999999999999766665555544444555543 4555 59999999999999999999999 9999999
Q ss_pred EcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 151 HIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 151 h~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
||+|.... ..++.+.+.++|++.++.|+.+.+.+.+++.|+|++ .+.||++||+++..+.+++..|+++|++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~gsii~iss~~~~~~~~~~~~y~~sKaa 153 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-----GGSIINISSIAAQRPMPGYSAYSASKAA 153 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----EEEEEEEEEGGGTSBSTTTHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCCcccccchhhcccCccchhhHHHHHH
Confidence 99998762 367889999999999999999999999999997653 3789999999999999999999999999
Q ss_pred HHHHHHHHHhcccccc-CCceEEEEeCCcccCccccccc---chhhhHHHHhcCCCC-CCHHHHHHHHHHHHhc
Q psy612 228 QTVYAKYLNNKNIYKK-YTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQKV-LHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~-~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~~~-l~~~~~~~~l~~~l~~ 296 (1005)
+.+|+++++.+.. . .++++.+|.+|+..+. |.... ++......+...+.. .+++|...++..++..
T Consensus 154 l~~l~r~lA~el~--~~~gIrVN~V~pG~i~t~-~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~ 224 (241)
T PF13561_consen 154 LEGLTRSLAKELA--PKKGIRVNAVSPGPIETP-MTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASD 224 (241)
T ss_dssp HHHHHHHHHHHHG--GHGTEEEEEEEESSBSSH-HHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhc--cccCeeeeeecccceecc-chhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCc
Confidence 9999999988865 4 5678888888877643 32111 112222334455544 6788888888777653
|
... |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=189.64 Aligned_cols=223 Identities=15% Similarity=0.111 Sum_probs=171.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+|+||++++++|+++|++++++.++.+...+..+.+...+.++.++.+|++|.++++++++.+...++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999865555444344455566676667778999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaan 225 (1005)
|+||||||... ..++.+.+.++|++.+++|+.+++++.+.+.+.|++ .+.+.||++||..+. .+.++.+.|+++|
T Consensus 85 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~ii~~ss~~~~~~~~~~~~~y~~sK 160 (251)
T PRK12826 85 DILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIR---AGGGRIVLTSSVAGPRVGYPGLAHYAASK 160 (251)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEEechHhhccCCCCccHHHHHH
Confidence 99999999887 677888899999999999999999999999998643 335789999999988 7888899999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++++.+++.++.+.. ..+++++.|.++.+.+.++....... .........+ ...++++....+..++.
T Consensus 161 ~a~~~~~~~~~~~~~--~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 230 (251)
T PRK12826 161 AGLVGFTRALALELA--ARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLAS 230 (251)
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999988766532 23458888888777554432111111 1111111121 33567777777766553
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=196.91 Aligned_cols=195 Identities=11% Similarity=0.031 Sum_probs=150.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++++.|+++|++++++.++.+..++..+++...+.++.++.+|++|.++++++++++.+.+++|
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 57899999999999999999999999765554433344445555564445678899999999999999999988888899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------ 214 (1005)
|+||||||+........+.+.++|+.++++|+.|++++.++++|.|++.. ...++||++||++...+
T Consensus 85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP-APDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCCceEEEEcccccCccccCCccCCCCcc
Confidence 99999999865223345678999999999999999999999999976421 12358999999765321
Q ss_pred -----------------------CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc
Q psy612 215 -----------------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 263 (1005)
Q Consensus 215 -----------------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~ 263 (1005)
..+...|+.+|.+...|++.+.++.. ...+++++++++|...+++|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~t~~~~ 234 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYH-ESTGITFSSLYPGCVADTPLFR 234 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhc-ccCCeEEEEecCCcccCCcccc
Confidence 01235799999999998888776531 1235689999998876666643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=216.09 Aligned_cols=247 Identities=13% Similarity=0.099 Sum_probs=182.7
Q ss_pred CCceEEEEecCCCCCcChHHHHHHHHHHhcCCC----ceEEE----EecCceeEEEeeeeeccccccCCccccCCCEEEE
Q psy612 2 PETQISIVFAEKITNFNIKNWINILFKELQEPK----LFSIM----YYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLI 73 (1005)
Q Consensus 2 p~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~~~----~~~v~----~r~g~~~r~~~~l~~~~~~~~~~~~~~~~~~~lI 73 (1005)
|++....+|.+.......++.....+.++.... ...+. +.-. .+- ++.......+......++++||
T Consensus 353 ~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~~~f~i~--~~~---~e~a~l~~~~~~~~l~gk~vLV 427 (681)
T PRK08324 353 PGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQEAFDIE--YWS---LEQAKLQRMPKPKPLAGKVALV 427 (681)
T ss_pred CCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChhhhccee--eeh---hhhhhhhcCCCCcCCCCCEEEE
Confidence 667777778776444445677777777765321 11110 0001 010 1111111111122236899999
Q ss_pred ECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEc
Q psy612 74 TGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHI 152 (1005)
Q Consensus 74 TGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~ 152 (1005)
|||+||||++++++|+++|++ |+++.|+. ..+...+.+... ..+.++.||++|++++.++++++.+.+|++|+||||
T Consensus 428 TGasggIG~~la~~L~~~Ga~-Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~ 505 (681)
T PRK08324 428 TGAAGGIGKATAKRLAAEGAC-VVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSN 505 (681)
T ss_pred ecCCCHHHHHHHHHHHHCcCE-EEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 999999999999999999985 55555543 334444444433 478899999999999999999999999999999999
Q ss_pred CcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCCChhhhHHHHHHHHH
Q psy612 153 AGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSSAILGDFGSCDYAMGNRFQTVY 231 (1005)
Q Consensus 153 AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia~~~g~~g~~~Yaaana~l~~l 231 (1005)
||+.. ..++.+.+.++|++++++|+.|++++.+.+.+.|++ .+ .++||++||..+..+.++++.|+++|++++.|
T Consensus 506 AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~---~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l 581 (681)
T PRK08324 506 AGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKA---QGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHL 581 (681)
T ss_pred CCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHH
Confidence 99987 788899999999999999999999999999998653 23 37999999999999999999999999999999
Q ss_pred HHHHHhccccccCCceEEEEeCCccc-Cccc
Q psy612 232 AKYLNNKNIYKKYTNKLITINWPLWN-NSKF 261 (1005)
Q Consensus 232 a~~~~~~g~~~~~~~~~~si~wg~w~-~~Gm 261 (1005)
++.++.+.. ..++++.+|+++.+- +++|
T Consensus 582 ~~~la~e~~--~~gIrvn~v~Pg~v~~~t~~ 610 (681)
T PRK08324 582 VRQLALELG--PDGIRVNGVNPDAVVRGSGI 610 (681)
T ss_pred HHHHHHHhc--ccCeEEEEEeCceeecCCcc
Confidence 999887643 345688889887763 4554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=214.12 Aligned_cols=186 Identities=15% Similarity=0.190 Sum_probs=156.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-C-CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-N-NKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++|++|+++|++++++.++.+..+...+++... + .++..++||++|+++++++++++.+.+|
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999986655554444444455555432 2 3678899999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|+..+++|+.|.+++.+.+++.|++ ....++||++||..+..+.+++..|+++
T Consensus 493 ~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~--~~~~g~IV~iSS~~a~~~~~~~~aY~aS 569 (676)
T TIGR02632 493 GVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMRE--QGLGGNIVFIASKNAVYAGKNASAYSAA 569 (676)
T ss_pred CCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEEeChhhcCCCCCCHHHHHH
Confidence 9999999999876 677888999999999999999999999999998753 2235689999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.|++.++.+.. ..++++.+|+++...
T Consensus 570 KaA~~~l~r~lA~el~--~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 570 KAAEAHLARCLAAEGG--TYGIRVNTVNPDAVL 600 (676)
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEECCcee
Confidence 9999999999887743 345688888887653
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-20 Score=179.36 Aligned_cols=186 Identities=16% Similarity=0.201 Sum_probs=153.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++-+.|||||.+|+|++.|+.|+++|+.++++.--+....+..++ .|.++.+.++|||++.+++.+++.++.+||++
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake---lg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE---LGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH---hCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 567899999999999999999999999988886655555555444 48899999999999999999999999999999
Q ss_pred cEEEEcCcccCccch-----hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh---cCCCcEEEEecCcccccCCCCC
Q psy612 147 DGVLHIAGISGLTSN-----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~-----~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~---~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
|.+|||||+....+. -...+.|+|++++++|+.|+++.++...-.|-..+ ....+.||+..|++++-|..||
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq 164 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ 164 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence 999999998652222 22347899999999999999999999887763211 2235789999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++|+++|+++-+++--.++... +.+++..+|.+|.+.
T Consensus 165 aaysaskgaivgmtlpiardla--~~gir~~tiapglf~ 201 (260)
T KOG1199|consen 165 AAYSASKGAIVGMTLPIARDLA--GDGIRFNTIAPGLFD 201 (260)
T ss_pred hhhhcccCceEeeechhhhhcc--cCceEEEeecccccC
Confidence 9999999999987665555432 344589999998884
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=182.50 Aligned_cols=188 Identities=16% Similarity=0.126 Sum_probs=152.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||++|||+++++.|+++ . +|++.+|+.. .++||++|++++++++++ ++++|+|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~----~~~id~l 59 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------------DVQVDITDPASIRALFEK----VGKVDAV 59 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence 6899999999999999999998 4 5666666542 368999999999988765 4789999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
|||||... ..++.+.+.++|++.+++|+.|++++.+++.|+|+ +.++|+++||+.+..+.+++..|+++|++++
T Consensus 60 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~ 133 (199)
T PRK07578 60 VSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN-----DGGSFTLTSGILSDEPIPGGASAATVNGALE 133 (199)
T ss_pred EECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCeEEEEcccccCCCCCCchHHHHHHHHHH
Confidence 99999876 67788999999999999999999999999999864 2478999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 230 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 230 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++.++.+. ..++++.+|.+|.. ++.|.... .. ..+...+++++..+.+..++..
T Consensus 134 ~~~~~la~e~---~~gi~v~~i~Pg~v-~t~~~~~~-----~~--~~~~~~~~~~~~a~~~~~~~~~ 189 (199)
T PRK07578 134 GFVKAAALEL---PRGIRINVVSPTVL-TESLEKYG-----PF--FPGFEPVPAARVALAYVRSVEG 189 (199)
T ss_pred HHHHHHHHHc---cCCeEEEEEcCCcc-cCchhhhh-----hc--CCCCCCCCHHHHHHHHHHHhcc
Confidence 9999998874 23568888876654 44442110 00 1234578999999988887764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=186.10 Aligned_cols=223 Identities=17% Similarity=0.152 Sum_probs=171.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+.+++|||||+|+||++++++|+++|+.++++.++... .+...+.++..+.++.++.+|++|++++.++++++.+.+++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999976665665542 23344555566778999999999999999999999888999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+|||+||... ...+.+.+.++|++.+++|+.+++++.+.+.+++++ .+.++||++||..+..+.++...|+.+|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~i~~SS~~~~~~~~~~~~y~~sK 160 (249)
T PRK12825 85 IDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK---QRGGRIVNISSVAGLPGWPGRSNYAAAK 160 (249)
T ss_pred CCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEECccccCCCCCCchHHHHHH
Confidence 999999999876 677888899999999999999999999999998643 3467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHH---hcCCCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK---SSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~---~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.+++.++.+.. ..+++++.|.+|...+..+ ...... ..... ......+++++..+.+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~--~~~i~~~~i~pg~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 231 (249)
T PRK12825 161 AGLVGLTKALARELA--EYGITVNMVAPGDIDTDMK-EATIEE-AREAKDAETPLGRSGTPEDIARAVAFLCSDA 231 (249)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEECCccCCcc-ccccch-hHHhhhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999988776532 2345888888776654332 211111 00011 01112457788888887776543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-18 Score=185.01 Aligned_cols=215 Identities=17% Similarity=0.161 Sum_probs=168.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++||||+|+||+.++++|+++|+++++ +.|++ ...+..+++... .++.++.+|+++.+++.++++.+.+.+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAI-TARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEE-eeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999987544 45543 334455555443 56889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+|||+||... ...+.+.+.++|++.+++|+.|++++.+++++.|+ ...++||++||+++..+..+...|+++|
T Consensus 83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~~~iv~~ss~~~~~~~~~~~~y~~sk 157 (237)
T PRK07326 83 LDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK----RGGGYIINISSLAGTNFFAGGAAYNASK 157 (237)
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH----HCCeEEEEECChhhccCCCCCchHHHHH
Confidence 999999999876 67788899999999999999999999999998862 2457899999999988888899999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++..+++.+..+.. ..++++++|..+...+. +...... . .....+++++..+.+..++..+.
T Consensus 158 ~a~~~~~~~~~~~~~--~~gi~v~~v~pg~~~t~-~~~~~~~------~-~~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 158 FGLVGFSEAAMLDLR--QYGIKVSTIMPGSVATH-FNGHTPS------E-KDAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEeeccccCc-ccccccc------h-hhhccCCHHHHHHHHHHHHhCCc
Confidence 999999998765532 23457888887665332 2211110 0 01123788999999988887664
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=188.61 Aligned_cols=179 Identities=12% Similarity=0.103 Sum_probs=147.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH-HHhhc---C
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS-IINNI---G 144 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-i~~~~---g 144 (1005)
.++|||||+||||++++++|+++|++++++ .|+... +. ....+.++.++++|++|.+++++++++ +.+.+ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~-~r~~~~-~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGV-ARSRHP-SL---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEE-ecCcch-hh---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 369999999999999999999999875555 444321 11 233466789999999999999998877 55544 4
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|++|||||......++.+.+.++|++++++|+.|++.+.+.+.+.|++ ...++||++||+.+..+.+++..|+++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~s 153 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASD---AAERRILHISSGAARNAYAGWSVYCAT 153 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhc---cCCCEEEEEeChhhcCCCCCchHHHHH
Confidence 79999999998653456778899999999999999999999999998643 346799999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|++++.|++.++.+ +..++++.+|.+|.+..
T Consensus 154 K~a~~~~~~~~~~~---~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 154 KAALDHHARAVALD---ANRALRIVSLAPGVVDT 184 (243)
T ss_pred HHHHHHHHHHHHhc---CCCCcEEEEecCCcccc
Confidence 99999999998877 23456899998887743
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=187.16 Aligned_cols=223 Identities=16% Similarity=0.205 Sum_probs=165.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc-
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID- 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id- 147 (1005)
|++|||||+||||++++++|+++|++++ +..|++. +.+.+..+..+.+++++.+|++|+++++++++++.+.++..+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~-~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVI-SISRTEN-KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEE-EEeCCch-HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 6899999999999999999999998654 4455432 122222233456788999999999999999999877665322
Q ss_pred ---EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 148 ---GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 148 ---gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
.+|||||...+..++.+.+.++|.+.+++|+.|++.+.+.++|+|++ ....+.||++||..+..+.+++..|+++
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 157 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKD--WKVDKRVINISSGAAKNPYFGWSAYCSS 157 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhc--cCCCceEEEecchhhcCCCCCcHHHhHH
Confidence 79999998654567889999999999999999999999999998643 1234689999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc----chh---hhHHHHhc-CCCCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQ---TDFYFKSS-KQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~---~~~~~~~~-g~~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+......++++.+|.+|.+. +.|.... ... ........ .-...++++..+.+..++..
T Consensus 158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMD-TNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLET 236 (251)
T ss_pred HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccc-cHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhc
Confidence 999999999988764323446788999887665 4432110 000 00111111 11356788888888887765
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.3e-19 Score=194.44 Aligned_cols=186 Identities=17% Similarity=0.169 Sum_probs=152.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++|||+++|||+++|+.|+.+|+ +|++..|+ +..++..+++... ...+.+++||+++..+|+++.+++++.+
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 568999999999999999999999996 45555555 4667777777653 4578899999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--------- 214 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--------- 214 (1005)
+++|++|||||+.. ... ..|.|.++..+.+|..|+++|++.++|.|++. ...+||++||+.+ ..
T Consensus 113 ~~ldvLInNAGV~~-~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s---~~~RIV~vsS~~~-~~~~~~~~l~~ 185 (314)
T KOG1208|consen 113 GPLDVLINNAGVMA-PPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRS---APSRIVNVSSILG-GGKIDLKDLSG 185 (314)
T ss_pred CCccEEEeCccccc-CCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhC---CCCCEEEEcCccc-cCccchhhccc
Confidence 99999999999976 222 77889999999999999999999999997642 3388999999886 11
Q ss_pred -----CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc
Q psy612 215 -----DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 263 (1005)
Q Consensus 215 -----~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~ 263 (1005)
..+...|+.+|.+...++..+.++.. . ++.+.++++|.+...++..
T Consensus 186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~--~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 186 EKAKLYSSDAAYALSKLANVLLANELAKRLK--K-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred hhccCccchhHHHHhHHHHHHHHHHHHHHhh--c-CceEEEECCCcccccceec
Confidence 11223599999999999998887743 2 6788899888887766654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-18 Score=184.88 Aligned_cols=221 Identities=17% Similarity=0.197 Sum_probs=169.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+|+||..++++|+++|.. |+++.|+ ...+.....++..+.++.++.+|++|++++.++++.+...+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3579999999999999999999999987 5555665 3444555666667788999999999999999999999888999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+|||+||... ...+.+.+.++|++.+..|+.+.+++.+.+.++|++ ...++||++||..+..+..+...|+.+|
T Consensus 83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~~ii~~ss~~~~~~~~~~~~y~~sk 158 (246)
T PRK05653 83 LDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIK---ARYGRIVNISSVSGVTGNPGQTNYSAAK 158 (246)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEECcHHhccCCCCCcHhHhHH
Confidence 999999999876 667788899999999999999999999999998643 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhc-CCCCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSS-KQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~-g~~~l~~~~~~~~l~~~l~ 295 (1005)
++++.+++.+..+.. ..+++.++|.++.+.+... ....... ....... .....++++..+.+..++.
T Consensus 159 ~~~~~~~~~l~~~~~--~~~i~~~~i~pg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 227 (246)
T PRK05653 159 AGVIGFTKALALELA--SRGITVNAVAPGFIDTDMT-EGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLAS 227 (246)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEeCCcCCcch-hhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999999988776522 2345888888876643322 1101100 0000110 1123556777777777664
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=187.91 Aligned_cols=178 Identities=13% Similarity=0.127 Sum_probs=146.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++|||||+||||++++++|+++|++++++.++.+..+++.+..+..+.++.++.+|++|++++.+++. +++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence 4789999999999999999999999876665554443444445555566678999999999988877653 3799
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ..++.+.+.+.|++++++|+.|++.+.+.+++.+++ ...++||++||..+..+.++...|+++|++
T Consensus 76 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a 151 (257)
T PRK09291 76 VLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA---RGKGKVVFTSSMAGLITGPFTGAYCASKHA 151 (257)
T ss_pred EEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCceEEEEcChhhccCCCCcchhHHHHHH
Confidence 9999999887 678889999999999999999999999999998643 334799999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++.+++.++.+.. ..++++.+|.+|.+.
T Consensus 152 ~~~~~~~l~~~~~--~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 152 LEAIAEAMHAELK--PFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHH--hcCcEEEEEecCccc
Confidence 9999988776522 234588899887664
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=187.43 Aligned_cols=184 Identities=18% Similarity=0.225 Sum_probs=152.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc--hHHHHHHHHhCC-CcEEEEEecCCC-HHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFN-NKAIYIQVDVSD-KLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~--~~~~~~~l~~~g-~~v~~~~~Dvtd-~~~v~~~~~~i~~~ 142 (1005)
.++++|||||++|||+++|+.|+++|+.++++.++... .+...+.....+ ..+.+..+|+++ .++++.+++.+.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999887777777654 233333333222 368888999998 99999999999999
Q ss_pred cCCccEEEEcCcccCcc-chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-Chh
Q psy612 143 IGPIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCD 220 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~-~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-~~~ 220 (1005)
+|++|++|||||+.. . .++.+.+.++|++++++|+.|.+.+.+++.|+++ ++ +||++||+++. +.++ .+.
T Consensus 84 ~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~---~Iv~isS~~~~-~~~~~~~~ 155 (251)
T COG1028 84 FGRIDILVNNAGIAG-PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK---KQ---RIVNISSVAGL-GGPPGQAA 155 (251)
T ss_pred cCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh---hC---eEEEECCchhc-CCCCCcch
Confidence 999999999999976 5 4899999999999999999999999998888765 22 89999999999 8777 499
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+| +..+.|
T Consensus 156 Y~~sK~al~~~~~~l~~e~~--~~gi~v~~v~PG-~~~t~~ 193 (251)
T COG1028 156 YAASKAALIGLTKALALELA--PRGIRVNAVAPG-YIDTPM 193 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHh--hhCcEEEEEEec-cCCCcc
Confidence 99999999999999986643 445788999888 444444
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=185.45 Aligned_cols=209 Identities=14% Similarity=0.191 Sum_probs=156.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|+++||||++|||++++++|+++|++++++ +|+.... ...++.++.+|++++ ++++.+.++++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~-~r~~~~~--------~~~~~~~~~~D~~~~------~~~~~~~~~~i 68 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGV-DKQDKPD--------LSGNFHFLQLDLSDD------LEPLFDWVPSV 68 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEE-eCCcccc--------cCCcEEEEECChHHH------HHHHHHhhCCC
Confidence 46899999999999999999999999865554 5543211 134688899999997 45555667899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 145 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLE---RKSGIIINMCSIASFVAGGGGAAYTASKH 145 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEcChhhccCCCCCcccHHHHH
Confidence 999999997642356788899999999999999999999999998643 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cc-hhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NN-EQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~-~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++++|.+|.+... +... .. ... ....+...+ ...++++..+.+..++..
T Consensus 146 a~~~~~~~la~~~~--~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 146 ALAGFTKQLALDYA--KDGIQVFGIAPGAVKTP-MTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASG 216 (235)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCCccCc-ccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcCh
Confidence 99999999888743 34568889998876433 3211 11 111 111111122 235788888888877643
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-18 Score=182.66 Aligned_cols=180 Identities=20% Similarity=0.295 Sum_probs=149.7
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+||||++|+||..++++|+++|++++++.++. +......+.++..+.++.++.+|++|+++++++++.+.+.++++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999998755555543 23344555666677789999999999999999999999999999999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
||+||... ...+.+.+.+.+++.+.+|+.+++.+.+.+.+++.+ ...++||++||.++..|.+++..|+++|.+++
T Consensus 81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~ 156 (239)
T TIGR01830 81 VNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIK---QRSGRIINISSVVGLMGNAGQANYAASKAGVI 156 (239)
T ss_pred EECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCeEEEEECCccccCCCCCCchhHHHHHHHH
Confidence 99999876 666778899999999999999999999999988632 34578999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCceEEEEeCCcc
Q psy612 230 VYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 230 ~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
.+++.++.+.. ..++++..+.+|..
T Consensus 157 ~~~~~l~~~~~--~~g~~~~~i~pg~~ 181 (239)
T TIGR01830 157 GFTKSLAKELA--SRNITVNAVAPGFI 181 (239)
T ss_pred HHHHHHHHHHh--hcCeEEEEEEECCC
Confidence 99888766532 23447777776654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-18 Score=181.98 Aligned_cols=212 Identities=15% Similarity=0.181 Sum_probs=159.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|+++||||+||||+.++++|+++|++++++ .|+... ... ..++.+|++|.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~-~r~~~~--------~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGI-ARSAID--------DFP--GELFACDLADIEQTAATLAQINEIH-PV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE-eCCccc--------ccC--ceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence 36899999999999999999999999765554 454321 111 2467899999999999999998876 68
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||.+ ..+.++...|+++|+
T Consensus 70 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~ 144 (234)
T PRK07577 70 DAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKL---REQGRIVNICSRA-IFGALDRTSYSAAKS 144 (234)
T ss_pred cEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEEcccc-ccCCCCchHHHHHHH
Confidence 99999999877 677888899999999999999999999999999753 3457899999985 567888999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++++|.+|.+....+..... ...........+. ...+++..+.+..++..+
T Consensus 145 a~~~~~~~~a~e~~--~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 145 ALVGCTRTWALELA--EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHHHHHHHHHH--hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999998877643 345689999988876543321100 0011111222222 236788888887776543
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=192.67 Aligned_cols=218 Identities=12% Similarity=0.053 Sum_probs=159.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..+++. .+.++.+|++|.++++++++++.+.++++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 57899999999999999999999999875554443333334444442 37789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------ 214 (1005)
|+||||||+.. . ..+.+.+.|+..+++|+.|++++.+.++|.|++ ...++||++||..+..+
T Consensus 101 D~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~---~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 101 DILINNAGVMA-C--PETRVGDGWEAQFATNHLGHFALVNLLWPALAA---GAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred CEEEECCCCCC-C--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCeEEEECCHHhccCCCCccccCccCC
Confidence 99999999864 2 235567889999999999999999999998753 23478999999865432
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh---HHHHhcC--C--CCCCHHHHH
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSK--Q--KVLHENDGL 287 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g--~--~~l~~~~~~ 287 (1005)
.++...|+++|+++..|++.++.+.. ..++++++|.+|... +.|......... ......+ + ...+++++.
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 251 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGK--DQGVRAFSVHPGGIL-TPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGA 251 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEeeCCccc-CCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHH
Confidence 23457899999999999998877632 345688999887664 334322111000 0011000 1 235788888
Q ss_pred HHHHHHHhcc
Q psy612 288 KLFEQLLIQD 297 (1005)
Q Consensus 288 ~~l~~~l~~~ 297 (1005)
..+..++..+
T Consensus 252 ~~~~~l~~~~ 261 (315)
T PRK06196 252 ATQVWAATSP 261 (315)
T ss_pred HHHHHHhcCC
Confidence 8888877544
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-18 Score=171.48 Aligned_cols=210 Identities=17% Similarity=0.185 Sum_probs=162.5
Q ss_pred CEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchH-HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh--cC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNS-IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN--IG 144 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~-~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~--~g 144 (1005)
+.|+||||.+|||+.++++|.+. |..+++...|+.... +..+.......++++++.||++.+++.++++++.+- ..
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 56999999999999999999976 555666666654332 222222223679999999999999999999999876 45
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC--------CCcEEEEecCcccccCC-
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--------KLDFVCYFSSSSAILGD- 215 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~--------~~~~iV~~SSia~~~g~- 215 (1005)
.++.+|||||+........+.+.+.|.+.+++|+.|+..+.|+++|++++.... ....||++||..+-.+.
T Consensus 84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~ 163 (249)
T KOG1611|consen 84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF 163 (249)
T ss_pred CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence 899999999998755666777899999999999999999999999999865432 12379999998776653
Q ss_pred --CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHH
Q psy612 216 --FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQL 293 (1005)
Q Consensus 216 --~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~ 293 (1005)
.++.+|.++|++|..|++.+.-+.. ..++-+++|+ |.|..+.|.... ..++++|....+...
T Consensus 164 ~~~~~~AYrmSKaAlN~f~ksls~dL~--~~~ilv~sih-PGwV~TDMgg~~-------------a~ltveeSts~l~~~ 227 (249)
T KOG1611|consen 164 RPGGLSAYRMSKAALNMFAKSLSVDLK--DDHILVVSIH-PGWVQTDMGGKK-------------AALTVEESTSKLLAS 227 (249)
T ss_pred CCcchhhhHhhHHHHHHHHHHhhhhhc--CCcEEEEEec-CCeEEcCCCCCC-------------cccchhhhHHHHHHH
Confidence 4678999999999999999988754 5556777886 457788886422 246777766665554
Q ss_pred H
Q psy612 294 L 294 (1005)
Q Consensus 294 l 294 (1005)
+
T Consensus 228 i 228 (249)
T KOG1611|consen 228 I 228 (249)
T ss_pred H
Confidence 4
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-18 Score=182.40 Aligned_cols=212 Identities=14% Similarity=0.105 Sum_probs=155.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||+||||+++++.|+++|++++++.+++.. ..+++ .+.+ +.++.+|++|.+++.++++ .+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~--~~~~~~D~~~~~~~~~~~~----~~~~ 75 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD---AAERLAQETG--ATAVQTDSADRDAVIDVVR----KSGA 75 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH---HHHHHHHHhC--CeEEecCCCCHHHHHHHHH----HhCC
Confidence 47899999999999999999999999976655444421 11222 2223 4577899999988877764 3689
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
+|+||||||... .....+.+.++|++++++|+.|++.+.+.+.+.|+ ..+.||++||..+. .+.++...|+++
T Consensus 76 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~Y~~s 149 (237)
T PRK12742 76 LDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMP-----EGGRIIIIGSVNGDRMPVAGMAAYAAS 149 (237)
T ss_pred CcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh-----cCCeEEEEeccccccCCCCCCcchHHh
Confidence 999999999876 56677889999999999999999999999998853 24689999999884 567889999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.+++.++.+.. ..++++.+|.+|... +.|................ -+..++++..+.+..++..
T Consensus 150 Kaa~~~~~~~la~~~~--~~gi~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 150 KSALQGMARGLARDFG--PRGITINVVQPGPID-TDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEEecCccc-CCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999998877643 345688899887774 4443221111111111111 1345788888887776643
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-18 Score=181.95 Aligned_cols=216 Identities=13% Similarity=0.117 Sum_probs=166.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+|+||+.++++|+++|++++++.++.....+..+++...+ +.++.+|++|.+++.++++++.+.+|++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 47899999999999999999999999875444443433344444554433 5667899999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+|||+||... ...+.+.+.++|++.+.+|+.+++.+.+++.+.|+ ..+.++||++||+.+..+.+++..|+++|+
T Consensus 84 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (239)
T PRK12828 84 DALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALT---ASGGGRIVNIGAGAALKAGPGMGAYAAAKA 159 (239)
T ss_pred CEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH---hcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence 99999999876 56677889999999999999999999999998864 335679999999999988899999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+++.++.... ..++++..|.+|...+..+..... .......+++++....+..++...
T Consensus 160 a~~~~~~~~a~~~~--~~~i~~~~i~pg~v~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~~l~~~ 221 (239)
T PRK12828 160 GVARLTEALAAELL--DRGITVNAVLPSIIDTPPNRADMP-------DADFSRWVTPEQIAAVIAFLLSDE 221 (239)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCcccCcchhhcCC-------chhhhcCCCHHHHHHHHHHHhCcc
Confidence 99999988776532 234588888887665432111000 000112367788888887777543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=184.79 Aligned_cols=183 Identities=15% Similarity=0.103 Sum_probs=152.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||+|+||+.++++|+++|++++++.++.+..+.+.+.+...+.++..+.+|++|.+++.++++.+.+.++++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47899999999999999999999999655554444444555555665667889999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... .....+.+.+++++++.+|+.|++.+.+.+++.|++ .+.++||++||..+..+.+++..|+++|++
T Consensus 81 ~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a 156 (255)
T TIGR01963 81 ILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK---QGWGRIINIASAHGLVASPFKSAYVAAKHG 156 (255)
T ss_pred EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCeEEEEEcchhhcCCCCCCchhHHHHHH
Confidence 9999999876 566677889999999999999999999999998643 346789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
++.+++.+..+.. ..+++++.|.++..
T Consensus 157 ~~~~~~~~~~~~~--~~~i~v~~i~pg~v 183 (255)
T TIGR01963 157 LIGLTKVLALEVA--AHGITVNAICPGYV 183 (255)
T ss_pred HHHHHHHHHHHhh--hcCeEEEEEecCcc
Confidence 9999998776532 22457777876654
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-18 Score=183.21 Aligned_cols=218 Identities=13% Similarity=0.129 Sum_probs=162.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++|||||+||||++++++|+++|+++++ +.|+ ...+++.+.+. +.++.++.+|++|.+++.++++++.++++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~-~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLA-LDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999986555 4554 33334444442 3568889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ..++.+.+.++|.+.+.+|+.|++.+.+++.+.+++ .+.+.||++||..+.. ..+...|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~-~~~~~~y~~sK~ 153 (257)
T PRK07074 79 DVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLK---RSRGAVVNIGSVNGMA-ALGHPAYSAAKA 153 (257)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCeEEEEEcchhhcC-CCCCcccHHHHH
Confidence 99999999876 567788899999999999999999999999888643 3457899999987653 346778999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh---hHHHHhc-CCCCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---DFYFKSS-KQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~~~~~~~-g~~~l~~~~~~~~l~~~l~ 295 (1005)
+++.+++.++.+.. ..+++++.+.+|............... ....+.. ....+.+++..+++..++.
T Consensus 154 a~~~~~~~~a~~~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 224 (257)
T PRK07074 154 GLIHYTKLLAVEYG--RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLAS 224 (257)
T ss_pred HHHHHHHHHHHHHh--HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999887643 234577888877554332211000000 0011111 1234778888888888774
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.5e-18 Score=182.92 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=164.5
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~id 147 (1005)
+++|||||+||||++++++|+++|+++ +++.|+... .+.+...+ +.++.||++|.+++.++++.+.... +++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v-~~~~r~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRV-LAACRKPDD---VARMNSLG--FTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEE-EEEeCCHHH---hHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 689999999999999999999999865 555555321 22333333 6778999999999999999887643 6899
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
++|||||... ..++.+.+.+++++.+++|+.|++++.+.+++.|++ .+.+.||++||+++..+.++...|+++|++
T Consensus 77 ~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~ 152 (256)
T PRK08017 77 GLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP---HGEGRIVMTSSVMGLISTPGRGAYAASKYA 152 (256)
T ss_pred EEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh---cCCCEEEEEcCcccccCCCCccHHHHHHHH
Confidence 9999999876 567888899999999999999999999999998643 345789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHHHHhcC---CCCCCHHHHHHHHHHHHhccchh
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSSK---QKVLHENDGLKLFEQLLIQDKIQ 300 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~g---~~~l~~~~~~~~l~~~l~~~~~~ 300 (1005)
++.+++.++.+.. ..+++++.|.+|.+... |..... ..........+ -..+.+++..+.+..++..+...
T Consensus 153 ~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 153 LEAWSDALRMELR--HSGIKVSLIEPGPIRTR-FTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred HHHHHHHHHHHHh--hcCCEEEEEeCCCcccc-hhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence 9999887655422 33458889988877432 221100 00000000001 12478999999999988776654
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=196.91 Aligned_cols=264 Identities=20% Similarity=0.212 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
.-|..+++.+||+|||+++++++ ++++|+...++.. ...+..++..+++. .|.+.|+++|+
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~~-------------~~~a~~va~~lGl~~~~~~~~v~~~Ca 84 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGEQ-------------QNIARQAALLAGLPESVPAYTVNRQCA 84 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------ChHHHHHHHHcCCCCCceeeeecchhh
Confidence 67889999999999999988887 6777754322110 12355688888996 48999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHH---------H------HH-HHcCCCCC---C-------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY---------I------AM-TSAGMLSP---D------------- 675 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~---------~------~~-~~~~~ls~---~------------- 675 (1005)
|++.||+.|+++|++|.||.+||+|++.+.. +... . .+ ...|+..+ .
T Consensus 85 sg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~y 164 (386)
T TIGR01930 85 SGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKY 164 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999875321 1000 0 00 00011000 0
Q ss_pred C-----------------CC--c---------CCC-------------C-------------------------CCCCce
Q psy612 676 G-----------------KC--Y---------VFD-------------E-------------------------RANGLV 689 (1005)
Q Consensus 676 g-----------------~~--~---------pfd-------------~-------------------------~a~G~~ 689 (1005)
| .- + |.. + ..|--.
T Consensus 165 G~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~ 244 (386)
T TIGR01930 165 GISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSP 244 (386)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCC
Confidence 0 00 0 320 0 011112
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||++.+.|++.|.+++++|+|++...+. ..+...+...++++||++||++|+||||+|.|.+.|
T Consensus 245 ~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa--- 316 (386)
T TIGR01930 245 LNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVD-----PEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFA--- 316 (386)
T ss_pred CCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccccHHHHHHHHHHHcCCCHHHCCeeehcchhH---
Confidence 389999999999999999999999999999887431 123344567899999999999999999999998876
Q ss_pred CHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccc
Q psy612 770 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 849 (1005)
Q Consensus 770 D~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~ 849 (1005)
++.....+.|+-. ..++.+.+-|...||+.+|+|+..++.++++|+.+
T Consensus 317 --~~~~~~~e~lG~~---~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--------------------------- 364 (386)
T TIGR01930 317 --AQVLACIKELGLD---LEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--------------------------- 364 (386)
T ss_pred --HHHHHHHHHhCCC---hhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 3333344455531 12355666777889999999999999999999874
Q ss_pred cccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 850 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 850 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+.|+++++..+.||.-..+|||
T Consensus 365 ---------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ---------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ---------CCCEEEEEEeccCCceEEEEeC
Confidence 1267788888889999999886
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=185.34 Aligned_cols=185 Identities=18% Similarity=0.168 Sum_probs=150.8
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++++|||||+|+||+.++++|+++|+++ +++.|+ +..++..+.+.. .++.++.+|++|++++.++++++.+.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARV-HVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 367999999999999999999999999874 555554 333333333322 2678899999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+|||+||.......+.+.+.++|++++++|+.+++++.+.+.+.++. ....++|+++||+++..|.+++..|+++
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~vv~~ss~~~~~~~~~~~~y~~~ 163 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKA--SGHGGVIIALSSVAGRLGYPGRTPYAAS 163 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCeEEEEecccccccCCCCCchhHHH
Confidence 99999999998733667788899999999999999999999999888643 2223789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.+++.++.+.. ..++++++|.+|...
T Consensus 164 K~a~~~~~~~l~~~~~--~~~i~~~~l~pg~v~ 194 (264)
T PRK12829 164 KWAVVGLVKSLAIELG--PLGIRVNAILPGIVR 194 (264)
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEecCCcC
Confidence 9999999988876532 234588889887653
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=171.02 Aligned_cols=179 Identities=17% Similarity=0.132 Sum_probs=151.4
Q ss_pred cCCCEEEEECC-hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh-hc
Q psy612 66 KQGGTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN-NI 143 (1005)
Q Consensus 66 ~~~~~~lITGg-~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~-~~ 143 (1005)
.+.+.++|||+ .||||.++|+.|+++|..++...+|.+....+.. +.| +.....||++++++.++..++++ .+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~---~~g--l~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI---QFG--LKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH---hhC--CeeEEeccCChHHHHHHHHHHhhCCC
Confidence 35678899986 5999999999999999987777777665544332 223 77889999999999999999988 78
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|.||.++||||..= ..+..+.+.++.+++|++|+.|.+.+++++...+.+ ..|.||++.|+++..+.|-.+.|.|
T Consensus 80 Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik----aKGtIVnvgSl~~~vpfpf~~iYsA 154 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK----AKGTIVNVGSLAGVVPFPFGSIYSA 154 (289)
T ss_pred CceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH----ccceEEEecceeEEeccchhhhhhH
Confidence 99999999999976 778899999999999999999999999998854432 4678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+|+++.++++.++-+.. ..+++++++-.|..
T Consensus 155 sKAAihay~~tLrlEl~--PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 155 SKAAIHAYARTLRLELK--PFGVRVINAITGGV 185 (289)
T ss_pred HHHHHHHhhhhcEEeee--ccccEEEEecccce
Confidence 99999999999988754 45567788766544
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=177.19 Aligned_cols=206 Identities=14% Similarity=0.153 Sum_probs=162.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+|+||+++|++|+++|+++|+++.|+.... . + .+.++.++.+|++|.++++++++. ++++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~--~-~---~~~~~~~~~~D~~~~~~~~~~~~~----~~~i 74 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV--T-D---LGPRVVPLQLDVTDPASVAAAAEA----ASDV 74 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh--h-h---cCCceEEEEecCCCHHHHHHHHHh----cCCC
Confidence 5689999999999999999999999985566666654211 1 1 456789999999999998887754 5789
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+|||+||......++.+.+.++|.+.+++|+.+++.+.+++.+.+++ .+.++||++||..+..+.++...|+++|+
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~v~~sS~~~~~~~~~~~~y~~sK~ 151 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA---NGGGAIVNVLSVLSWVNFPNLGTYSASKA 151 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence 999999998332667888899999999999999999999999998643 34678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++.|++.++.+.. ..+++++++.++... +.|... .....+++++..+.+...+..+..
T Consensus 152 a~~~~~~~l~~~~~--~~~i~~~~v~pg~v~-t~~~~~-----------~~~~~~~~~~~a~~~~~~~~~~~~ 210 (238)
T PRK08264 152 AAWSLTQALRAELA--PQGTRVLGVHPGPID-TDMAAG-----------LDAPKASPADVARQILDALEAGDE 210 (238)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeCCccc-cccccc-----------CCcCCCCHHHHHHHHHHHHhCCCC
Confidence 99999998876632 234588888887764 333211 112267888888888888876543
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=191.96 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|..+++.+||+|||+++++++ +|++|....... ....+..++..+|+++ |+++|+++|+|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~-------------~~~~a~~v~~~lGl~~~~~~~v~~~cas 84 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI-------------ELYPAPIVAEYSGLTGKVPLRVEAMCAT 84 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-------------cCChHHHHHHHhCCCCCCeeEEeccCHH
Confidence 57889999999999999988887 788876432110 0123566889999977 77899999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCH-HH-------------------------HHH------HHHcCCC-----
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISP-EA-------------------------YIA------MTSAGML----- 672 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~-~~-------------------------~~~------~~~~~~l----- 672 (1005)
++.||+.|+..|++|+||.+||+|++.+... .. +.. +.+.|.-
T Consensus 85 g~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a 164 (385)
T PRK12578 85 GLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMA 164 (385)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHH
Confidence 9999999999999999999999998863321 00 000 0000100
Q ss_pred ------------CCCCCC----------------cCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccC
Q psy612 673 ------------SPDGKC----------------YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 724 (1005)
Q Consensus 673 ------------s~~g~~----------------~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~d 724 (1005)
.|.+.. .|+ ...|-...+||++++||.+.+.|.+.+-+.++.|+|++..++
T Consensus 165 ~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~ 243 (385)
T PRK12578 165 LVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYAND 243 (385)
T ss_pred HHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecC
Confidence 011111 111 122333458999999999999998887556788999998877
Q ss_pred CCCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC-----------CCCCC
Q psy612 725 GKTNGITAPN---GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQK 789 (1005)
Q Consensus 725 G~~~~~~~p~---~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~-----------~~~~~ 789 (1005)
....+ ..|+ ..+...++++||++||++|+|||++|.|.+.| ..|+.+++.. |... .....
T Consensus 244 ~~~~~-~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft----~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G 318 (385)
T PRK12578 244 YAYVA-RRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT----IAEIMGYEDLGFTEKGKGGKFIEEGQSEKGG 318 (385)
T ss_pred ccccc-ccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh----HHHHHHHHHcCCCCCCchHHHHHCCCccCCC
Confidence 54321 1121 23556899999999999999999999999998 4777777644 1111 11122
Q ss_pred ceeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 790 FCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 790 ~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
.+|| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 319 ~~pvN~~GG~la~-GhP~gatG~~~v~e~~~qLrg~ 353 (385)
T PRK12578 319 KVGVNLFGGLKAK-GHPLGATGLSMIYEITKQLRDE 353 (385)
T ss_pred CeeeCCCCCcccC-CCCccHHHHHHHHHHHHHHhCC
Confidence 3455 555655 9999999999999999999874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=176.37 Aligned_cols=185 Identities=15% Similarity=0.089 Sum_probs=151.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||+|+||+.++++|+++|++++++.++.. ..+.....+... +..+.++.+|++|.+++.++++.+.+.++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999987766665543 233444445443 34688899999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... ..++.+.+.++|+.++++|+.|++++.+++.|.+.+ ..+.+++++|..+..+.++...|+++
T Consensus 85 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~s 159 (249)
T PRK09135 85 RLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRK----QRGAIVNITDIHAERPLKGYPVYCAA 159 (249)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhh----CCeEEEEEeChhhcCCCCCchhHHHH
Confidence 9999999999876 566777888999999999999999999999988643 24678888988887778888999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
|++++.+++.++.+.. .+++++.+.++.+...
T Consensus 160 K~~~~~~~~~l~~~~~---~~i~~~~v~pg~~~~~ 191 (249)
T PRK09135 160 KAALEMLTRSLALELA---PEVRVNAVAPGAILWP 191 (249)
T ss_pred HHHHHHHHHHHHHHHC---CCCeEEEEEeccccCc
Confidence 9999999998887632 2357888887766443
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=178.54 Aligned_cols=206 Identities=14% Similarity=0.073 Sum_probs=152.5
Q ss_pred EEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 72 lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
|||||++|||++++++|+++|+++++ +.|+ +..++..+.++ .+.++.++.||++|++++.+++++ ++++|+||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTI-ASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AGPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence 69999999999999999999987544 4554 33334444443 356788999999999999888865 47899999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHH
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTV 230 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~ 230 (1005)
||||... ..++.+.+.++|++++++|+.+++++.++ +. + .+.++||++||.++..+.+++..|+++|+++++
T Consensus 75 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~--~~---~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 146 (230)
T PRK07041 75 ITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVARA--AR---I--APGGSLTFVSGFAAVRPSASGVLQGAINAALEA 146 (230)
T ss_pred ECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHhh--hh---h--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHH
Confidence 9999877 67788889999999999999999999993 33 2 245799999999999999999999999999999
Q ss_pred HHHHHHhccccccCCceEEEEeCCcccCcccccccch----hh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 231 YAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 231 la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++.++.+.. ++++.+|.+|.. .+.|...... .. ....+.... ....+++..+.+..++..
T Consensus 147 ~~~~la~e~~----~irv~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 213 (230)
T PRK07041 147 LARGLALELA----PVRVNTVSPGLV-DTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN 213 (230)
T ss_pred HHHHHHHHhh----CceEEEEeeccc-ccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC
Confidence 9999887643 257788887654 3333211000 00 001111111 234578888888777653
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-17 Score=189.13 Aligned_cols=283 Identities=17% Similarity=0.176 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCsS 629 (1005)
..|+.+++.+||+|||+++++++ +|++|+....+.... . . .+..+...++++ .|+++|+++|+|
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~~~-----~---~---~~~~~~~~~gl~~~p~~~v~~~CaS 87 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSPQD-----F---P---ASLVLQADPALRFKPATRVENACAT 87 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCccccc-----c---c---hhHHHHHhcCCCCCceeeeccccHH
Confidence 57899999999999999988876 788886543321110 0 0 111122344554 489999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHH-H------HH-----------------------HHcCCCC-----
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY-I------AM-----------------------TSAGMLS----- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~-~------~~-----------------------~~~~~ls----- 673 (1005)
++.||+.|++.|++|+||.+||+|++.+.. |... . .+ .+.|.-.
T Consensus 88 g~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~ 167 (389)
T PRK07516 88 GSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAM 167 (389)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999986432 1100 0 00 0001000
Q ss_pred ------------CCCCC-cCCCC------------------CCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeec
Q psy612 674 ------------PDGKC-YVFDE------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 722 (1005)
Q Consensus 674 ------------~~g~~-~pfd~------------------~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~ 722 (1005)
|.-.. +|++. ..|--.++||++++||.+.+.|.+.+. ++.|+|++..
T Consensus 168 vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~ 245 (389)
T PRK07516 168 IAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR--AVRFRARAHV 245 (389)
T ss_pred HHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEEEEEec
Confidence 11000 11111 123334689999999999999987754 5679999988
Q ss_pred cCCCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH--------HHhc-cCCCCCCcee
Q psy612 723 YDGKTNGITAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH--------DVFK-NKTYNQKFCA 792 (1005)
Q Consensus 723 ~dG~~~~~~~p-~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~--------~~~~-~~~~~~~~~~ 792 (1005)
++.....-..| ...+...++++||++||++|+|||++|.|.+.|.. ..+.+++|. +.+. ........+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~p 324 (389)
T PRK07516 246 NDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQGARAIREGWTAKDGKLP 324 (389)
T ss_pred cCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCchHHHHHCCCccCCCCee
Confidence 87543222222 34667789999999999999999999999999974 233333332 0111 1111122345
Q ss_pred E---eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccC
Q psy612 793 I---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869 (1005)
Q Consensus 793 i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG 869 (1005)
| |..|+ .||+.+|+|+..++.++++|+...=..++ ...|++++.+.|
T Consensus 325 vN~sGG~la-~Ghp~gasG~~~~~e~~~QL~g~ag~rQv-----------------------------~~a~~~l~~~~g 374 (389)
T PRK07516 325 VNPSGGLKA-KGHPIGATGVSMHVLAAMQLTGEAGGMQI-----------------------------PGAKLAGVFNMG 374 (389)
T ss_pred ecCCCCccc-CCCCccHHHHHHHHHHHHHhcCCccCCcC-----------------------------CchheeeeeccC
Confidence 5 56786 69999999999999999999985211110 124678888877
Q ss_pred -CCCceEEEEEec
Q psy612 870 -MSGTNAHIVLQE 881 (1005)
Q Consensus 870 -~gG~nah~il~~ 881 (1005)
.+.+++.+||+.
T Consensus 375 g~~~~~~~~vl~~ 387 (389)
T PRK07516 375 GAAVANYVSILER 387 (389)
T ss_pred cccceEEEEEEEe
Confidence 445566666653
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=190.86 Aligned_cols=265 Identities=19% Similarity=0.191 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
.-|..+++.+||+|||+++++++ .|++|+....+.. ....+..++...|+. -|+++|+++|+
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID----~vi~g~~~~~~~~------------~~~~a~~~~~~~Gl~~~~p~~~V~~aCa 91 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG----HVVFGHVIPTEPR------------DMYLSRVAAINAGVPQETPAFNVNRLCG 91 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEeeeccccCC------------CccHHHHHHHHcCCCCCCceEEecccch
Confidence 46788999999999999988876 6788865432110 012333345667885 59999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---------------HHHH----HHH-c-----CC-----------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIA----MTS-A-----GM----------- 671 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---------------~~~~----~~~-~-----~~----------- 671 (1005)
|++.|++.|++.|++|.+|.+||+|++.+.. |. .... +.. . ++
T Consensus 92 Sg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygi 171 (394)
T PRK09051 92 SGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGI 171 (394)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999985432 11 0000 000 0 00
Q ss_pred ------------------------------------------CCCCCCC------------cCCCCCCCCce-------e
Q psy612 672 ------------------------------------------LSPDGKC------------YVFDERANGLV-------P 690 (1005)
Q Consensus 672 ------------------------------------------ls~~g~~------------~pfd~~a~G~~-------~ 690 (1005)
+.|+... +|+....+|.+ +
T Consensus 172 tre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~ 251 (394)
T PRK09051 172 SREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGI 251 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCC
Confidence 0122111 12221111444 3
Q ss_pred cCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
+||++++||.+.+.|.+.|++++++|+|++...+.. .+...+...+++++|++||++|+||||+|.|.. +
T Consensus 252 ~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~agi~~~did~~ei~d~-----f 321 (394)
T PRK09051 252 NDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDP-----EYMGIGPVPATQKALERAGLTVADLDVIEANEA-----F 321 (394)
T ss_pred CCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----CcccccHHHHHHHHHHHcCCCHHHcCEEEecCc-----c
Confidence 799999999999999999999999999998875321 122345578999999999999999999999975 4
Q ss_pred HHHHHHHHHHhccCCCCCCcee-EeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccc
Q psy612 771 PVEINALHDVFKNKTYNQKFCA-ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 849 (1005)
Q Consensus 771 ~~E~~al~~~~~~~~~~~~~~~-igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~ 849 (1005)
+++..+..+.|+-.. .++. -|..+ .+||+.+|+|+..++.++.+|+.+
T Consensus 322 ~~~~~~~~e~lg~~~---~~vN~~GG~~-a~Ghp~gAsG~~~~~~~~~~L~~~--------------------------- 370 (394)
T PRK09051 322 AAQACAVTRELGLDP---AKVNPNGSGI-SLGHPVGATGAIITVKALYELQRI--------------------------- 370 (394)
T ss_pred HHHHHHHHHHhCCCc---cccCCCccHH-HhcchHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 577777778886432 1222 34444 469999999999999999999862
Q ss_pred cccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 850 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 850 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-.-||.-..+|||.
T Consensus 371 ---------~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 371 ---------GGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred ---------CCCEEEEEEccccChhhEEEEEe
Confidence 12456666666778888888874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=177.90 Aligned_cols=196 Identities=11% Similarity=0.011 Sum_probs=143.8
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.++||||++|||+++++.|+++|++++++.++.+..++..+++ .+.++++|++|+++++++++++.+ ++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l 73 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI 73 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence 4899999999999999999999986555544333222222222 256788999999999999887743 69999
Q ss_pred EEcCcccCc-----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 150 LHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 150 Ih~AG~~~~-----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
|||||.... ...+.+ +.++|++++++|+.|++++.++++|.|+ +.+.||++||.+ .++...|+++
T Consensus 74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~-----~~g~Iv~isS~~----~~~~~~Y~as 143 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLR-----SGGSIISVVPEN----PPAGSAEAAI 143 (223)
T ss_pred EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCeEEEEecCC----CCCccccHHH
Confidence 999985320 112444 5789999999999999999999999864 237899999976 3566889999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.... .|... ... ....+++|..+.+..++..
T Consensus 144 Kaal~~~~~~la~e~~--~~gI~v~~v~PG~v~t-~~~~~--------~~~--~p~~~~~~ia~~~~~l~s~ 202 (223)
T PRK05884 144 KAALSNWTAGQAAVFG--TRGITINAVACGRSVQ-PGYDG--------LSR--TPPPVAAEIARLALFLTTP 202 (223)
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEecCccCc-hhhhh--------ccC--CCCCCHHHHHHHHHHHcCc
Confidence 9999999999988754 4457888998876642 22100 011 1123778888887776543
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=190.05 Aligned_cols=266 Identities=22% Similarity=0.274 Sum_probs=183.6
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN 624 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~ 624 (1005)
.++ .-|+.+++.+||+|||+++++++ +|++|...... .+ .+ .+..++..+|+.. |.++|+
T Consensus 23 ~~~-~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~----------~~--~~-~~~~~~~~~Gl~~~~p~~~v~ 84 (394)
T PLN02644 23 LSA-TELGSIAIQAALERAGVDPALVQ----EVFFGNVLSAN----------LG--QA-PARQAALGAGLPPSTICTTVN 84 (394)
T ss_pred CCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCC----------cC--Cc-HHHHHHHhcCCCCCCceEEEe
Confidence 444 67889999999999999988887 78887532211 01 11 2334778888863 788999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---------------H---H-------------H------HH
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------A---Y-------------I------AM 666 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---------------~---~-------------~------~~ 666 (1005)
++|+|++.|+++|+++|++|+||++||+|++.+.. |. . . + .+
T Consensus 85 ~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 164 (394)
T PLN02644 85 KVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCA 164 (394)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHH
Confidence 99999999999999999999999999999764321 00 0 0 0 00
Q ss_pred HHcCCCC-----------------CC-CCCc----C-------------CC--C-------------------------C
Q psy612 667 TSAGMLS-----------------PD-GKCY----V-------------FD--E-------------------------R 684 (1005)
Q Consensus 667 ~~~~~ls-----------------~~-g~~~----p-------------fd--~-------------------------~ 684 (1005)
.+.|+-. ++ +..+ | +| + .
T Consensus 165 ~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~ 244 (394)
T PLN02644 165 DQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTA 244 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEec
Confidence 0111110 10 1111 0 10 0 0
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
.|--.++||++++||++.+.|.+.+++++++|+|++.+++......+.| ..+++++|++||++|+||+|+|.|
T Consensus 245 ~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~-----~~a~~~al~~Agi~~~Did~~Ei~-- 317 (394)
T PLN02644 245 GNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAP-----ALAIPKALKHAGLEASQVDYYEIN-- 317 (394)
T ss_pred cccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhH-----HHHHHHHHHHcCCCHHHCCEEEeC--
Confidence 1223358999999999999999999999999999998876432222222 469999999999999999999987
Q ss_pred CCCCCCHHHHHHH--HHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 765 GTKLGDPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 765 gt~~gD~~E~~al--~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
|+.+...+ .+.|+-.. .++.+..-+..+||+.+|+|+..++.++.+|+.+
T Consensus 318 -----d~f~~~~l~~~e~lg~~~---~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~-------------------- 369 (394)
T PLN02644 318 -----EAFSVVALANQKLLGLDP---EKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK-------------------- 369 (394)
T ss_pred -----cHHHHHHHHHHHHhCCCc---cccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc--------------------
Confidence 55444433 34554211 1234444444679999999999999999999863
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++..+-||....+|||.
T Consensus 370 ----------------~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 370 ----------------NGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred ----------------CCCeEEEEEeccCCceeEEEEEe
Confidence 11455565667789999999985
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-17 Score=176.62 Aligned_cols=202 Identities=15% Similarity=0.074 Sum_probs=140.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+||||+++|+.|+++|++++++.++... .. +.. ..+. ..++.+|++|.+++.+ .++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~--~~-~~~-~~~~-~~~~~~D~~~~~~~~~-------~~~~i 80 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN--NS-ESN-DESP-NEWIKWECGKEESLDK-------QLASL 80 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh--hh-hhh-ccCC-CeEEEeeCCCHHHHHH-------hcCCC
Confidence 46899999999999999999999999876555443311 11 111 1122 3578899999987653 46789
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..+.+.++|++++++|+.|+++++++++|.|++......+.+++.||.++..+ ++...|+++|+
T Consensus 81 DilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKa 155 (245)
T PRK12367 81 DVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKR 155 (245)
T ss_pred CEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHH
Confidence 99999999754 23568899999999999999999999999975321122344555667666544 46788999999
Q ss_pred HHHHHH---HHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhh
Q psy612 227 FQTVYA---KYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 302 (1005)
Q Consensus 227 ~l~~la---~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~ 302 (1005)
++..+. +.++.++. ..++.+.++..|++. +.|. ....++++++.+.+.+.+..+....+
T Consensus 156 al~~~~~l~~~l~~e~~--~~~i~v~~~~pg~~~-t~~~--------------~~~~~~~~~vA~~i~~~~~~~~~~~~ 217 (245)
T PRK12367 156 LIGQLVSLKKNLLDKNE--RKKLIIRKLILGPFR-SELN--------------PIGIMSADFVAKQILDQANLGLYLII 217 (245)
T ss_pred HHHHHHHHHHHHHHhhc--ccccEEEEecCCCcc-cccC--------------ccCCCCHHHHHHHHHHHHhcCCceEE
Confidence 986554 33433333 334466667777663 2331 01257899999998888877665443
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=191.43 Aligned_cols=238 Identities=15% Similarity=0.164 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccchh
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSS 629 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCsS 629 (1005)
-|..++..++|+|+|+++++++ .|++|...... . ...++..++...|+.. |+++|+++|+|
T Consensus 29 ~L~~~a~~~al~~agi~~~~Id----~vv~G~~~~~~------------~-g~~~~r~~~~~~Gl~~~~p~~~V~~~CaS 91 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDPALVN----EVILGQVITGG------------S-GQNPARQTLIHAGIPKEVPGYTINKVCGS 91 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC----EEEEEecCccc------------c-ccHHHHHHHHHCCCCCCccchhhcchhHH
Confidence 5678999999999999988887 68888644221 0 1124445678889974 99999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCC-CHHH-H------H----H-----HHHc-CCCC------------------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMI-SPEA-Y------I----A-----MTSA-GMLS------------------ 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~-~~~~-~------~----~-----~~~~-~~ls------------------ 673 (1005)
|+.|++.|++.|++|++|++||||++.+. .|.. . . . +... +.+.
T Consensus 92 G~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~git 171 (392)
T PRK06633 92 GLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNIS 171 (392)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999654 2210 0 0 0 0000 0000
Q ss_pred ------------------C-CCCCc----CCC-----------------------C--------CCCC-------ceecC
Q psy612 674 ------------------P-DGKCY----VFD-----------------------E--------RANG-------LVPSE 692 (1005)
Q Consensus 674 ------------------~-~g~~~----pfd-----------------------~--------~a~G-------~~~gE 692 (1005)
| .+..+ |.+ . +.+| -.++|
T Consensus 172 re~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n~s~~sD 251 (392)
T PRK06633 172 RQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGNASSIND 251 (392)
T ss_pred HHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechhcCCccC
Confidence 0 01011 111 0 0123 34699
Q ss_pred ccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy612 693 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 772 (1005)
Q Consensus 693 Ga~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~ 772 (1005)
|++++||.+.+.|.+.|.++++.|+|++...+... +.+.+...++++||++||++|+||||+|.| |+.
T Consensus 252 GAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~Al~~AGl~p~DID~~ei~-------daf 319 (392)
T PRK06633 252 GAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS-----IMGTAPVPASQKALSKAGWSVNDLEVIEVN-------EAF 319 (392)
T ss_pred ceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc-----hhchHHHHHHHHHHHHcCCCHHHcCeeehh-------hHH
Confidence 99999999999999999999999999998754211 112455788999999999999999999987 444
Q ss_pred HHHHHH--HHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 773 EINALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 773 E~~al~--~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
.++.|. +.++- ...++.+.+-|..+||+.+|+|+..++.++++|+.
T Consensus 320 a~~~l~~~~~l~~---~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~ 367 (392)
T PRK06633 320 AAQSIYVNREMKW---DMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRR 367 (392)
T ss_pred HHHHHHHHhhhCC---CccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHh
Confidence 444332 22221 12346788889999999999999999999999986
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-17 Score=175.62 Aligned_cols=208 Identities=11% Similarity=0.134 Sum_probs=154.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||+||||+++|+.|+++|.. .+++..|..... ..+.++.+++||+++.++++++ .+.++++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~----~~~~~~id 69 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQL----SEQFTQLD 69 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHH----HHhcCCCC
Confidence 36899999999999999999999643 344445543211 1245788999999999988774 35578999
Q ss_pred EEEEcCcccCc-----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---CCCCCh
Q psy612 148 GVLHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---GDFGSC 219 (1005)
Q Consensus 148 gvIh~AG~~~~-----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---g~~g~~ 219 (1005)
+||||||+... ...+.+.+.+.|++.+++|+.+++.+.+.++|.|+ +...++++++||..+.. +.++..
T Consensus 70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~~~~~i~~iss~~~~~~~~~~~~~~ 146 (235)
T PRK09009 70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLK---QSESAKFAVISAKVGSISDNRLGGWY 146 (235)
T ss_pred EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcc---ccCCceEEEEeecccccccCCCCCcc
Confidence 99999998741 23577889999999999999999999999999864 33456899999876643 245678
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
.|+++|+++++|++.++.+......++++.+|.+|.. ++.|...... ........++++..+.+..++..+
T Consensus 147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v-~t~~~~~~~~------~~~~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTT-DTALSKPFQQ------NVPKGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccce-ecCCCcchhh------ccccCCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999887543234678888887765 4555322110 001112478999999998888765
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-17 Score=187.32 Aligned_cols=266 Identities=19% Similarity=0.185 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCccccccc
Q psy612 549 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTA 626 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~ta 626 (1005)
+...|+.+++++||+|||+++++++ .|++|....+... ...++..++..+|+. .|+++|+++
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID----~vi~G~~~~~~~~------------~~~~a~~i~~~lGl~~~~p~~~V~~a 89 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVE----DVIMGCANPEGAT------------GANIARQIALRAGLPVTVPGMTVNRF 89 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----cEEEEEeeccccc------------ccHHHHHHHHHcCCCCCCceeeecch
Confidence 3478899999999999999998887 5888865443210 123777888988986 799999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-----------H-------H--HHH-----HHcCCCC-------
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-----------A-------Y--IAM-----TSAGMLS------- 673 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-----------~-------~--~~~-----~~~~~ls------- 673 (1005)
|+|++.||+.|+++|++|++|++||||++.+.. |. . + +.. ...-.++
T Consensus 90 CaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~~d~~ 169 (392)
T PRK07108 90 CSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEY 169 (392)
T ss_pred hhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999999999999996532 10 0 0 000 0000111
Q ss_pred ------------CCCC--------------CcCC-----------CCC-----------------C--CCc-------ee
Q psy612 674 ------------PDGK--------------CYVF-----------DER-----------------A--NGL-------VP 690 (1005)
Q Consensus 674 ------------~~g~--------------~~pf-----------d~~-----------------a--~G~-------~~ 690 (1005)
.+|+ -.|+ +++ . .|. .+
T Consensus 170 a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n~~~~ 249 (392)
T PRK07108 170 GVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGNASQF 249 (392)
T ss_pred HHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCcCCCC
Confidence 1111 0111 111 0 233 25
Q ss_pred cCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
+||++++||.+.+.|.+.|.++++.|+|++...+. ..+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Did~~ei~-------- 316 (392)
T PRK07108 250 SDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCE-----PDEMGIGPVFAVPKLLKQAGLKVDDIDLWELN-------- 316 (392)
T ss_pred CCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CcccchhHHHHHHHHHHHcCCCHHHcCchHhh--------
Confidence 99999999999999999999999999999887532 12333456789999999999999999999977
Q ss_pred HHHHHHHHHHhcc--CCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecc
Q psy612 771 PVEINALHDVFKN--KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 848 (1005)
Q Consensus 771 ~~E~~al~~~~~~--~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~ 848 (1005)
|.-++..++.- ..-...++.+..-+..+||+.+|+|+.=++..+-.|+.+
T Consensus 317 --eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~-------------------------- 368 (392)
T PRK07108 317 --EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR-------------------------- 368 (392)
T ss_pred --hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh--------------------------
Confidence 33344443321 000112355666677789999999999888888888652
Q ss_pred ccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 849 SNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 849 ~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-+.+|||.
T Consensus 369 ----------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 369 ----------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred ----------CCCEEEEEEccccChhhEEEEEe
Confidence 12566677777788888888874
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-17 Score=174.82 Aligned_cols=217 Identities=14% Similarity=0.184 Sum_probs=158.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++++||||+||||+.+++.|+++|++ |+++.|+... .+++.... .+.++.+|+++.+++.++++. ++++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~-V~~~~r~~~~---~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~~~~ 78 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGAR-VVAAARNAAA---LDRLAGET-GCEPLRLDVGDDAAIRAALAA----AGAF 78 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHh-CCeEEEecCCCHHHHHHHHHH----hCCC
Confidence 5689999999999999999999999985 5556665321 12222211 245688999999988877765 5789
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||... ...+.+.+.++|++++.+|+.+++++.+++.+.+++ ....++||++||.++..+.++...|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~ 155 (245)
T PRK07060 79 DGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIA--AGRGGSIVNVSSQAALVGLPDHLAYCASKA 155 (245)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCcEEEEEccHHHcCCCCCCcHhHHHHH
Confidence 99999999876 667778899999999999999999999999988642 222478999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccc--ccchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI--GNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~--~~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+++.++.+.. ..++++++|.+|......+.. .............. ....++++..+.+..++..+
T Consensus 156 a~~~~~~~~a~~~~--~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 156 ALDAITRVLCVELG--PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HHHHHHHHHHHHHh--hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 99999998876532 234588888877664432211 01011111111111 23467888888888777543
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-18 Score=179.06 Aligned_cols=183 Identities=12% Similarity=0.138 Sum_probs=150.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-+++++||||+.|||++.|+.||++|.+ |++++|+ +.++.+.++|++. +.++.++.+|.++.+.+.+-+.+.... .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~n-vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFN-VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-L 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-C
Confidence 4589999999999999999999999997 5666665 6778888888654 688999999999988744444333332 4
Q ss_pred CccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 145 PIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 145 ~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
+|.++|||+|.... +..+.+.+.+.+++++.+|+.++..+.+.++|.|. +++.|.||++||.++..+.|..+.|++
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~---~r~~G~IvnigS~ag~~p~p~~s~ysa 202 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMV---ERKKGIIVNIGSFAGLIPTPLLSVYSA 202 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhh---cCCCceEEEeccccccccChhHHHHHH
Confidence 78899999998762 45688888889999999999999999999999963 467789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+|+|++.|++.++.+.. ..++.+-+|.+...
T Consensus 203 sK~~v~~~S~~L~~Ey~--~~gI~Vq~v~p~~V 233 (312)
T KOG1014|consen 203 SKAFVDFFSRCLQKEYE--SKGIFVQSVIPYLV 233 (312)
T ss_pred HHHHHHHHHHHHHHHHH--hcCeEEEEeehhhe
Confidence 99999999999988754 34446667765544
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.6e-17 Score=186.48 Aligned_cols=264 Identities=16% Similarity=0.169 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 551 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
.-|+.++..++|+ |||+++++++ .|++|..... +......+..++...|+.+ |+++|+++|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id----~v~~G~~~~~------------~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~C 89 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID----DVIYGCANQA------------GEDNRNVARMAALLAGLPVSVPGTTVNRLC 89 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc------------ccccccHHHHHHHHcCCCCCCceEEeechh
Confidence 4577889999999 7899988876 6888854321 0101234555889999973 999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-------HH---------------------HHHH-----------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------AY---------------------IAMT----------- 667 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-------~~---------------------~~~~----------- 667 (1005)
+||+.|++.|++.|++|++|++||||++.+.. |. .+ ..+.
T Consensus 90 aSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~~ae~~ 169 (400)
T TIGR02430 90 GSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENV 169 (400)
T ss_pred hhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHHHHHHH
Confidence 99999999999999999999999999996542 21 00 0000
Q ss_pred --Hc-------------------------------------------CCCCCCCCCc-------------CCCC-----C
Q psy612 668 --SA-------------------------------------------GMLSPDGKCY-------------VFDE-----R 684 (1005)
Q Consensus 668 --~~-------------------------------------------~~ls~~g~~~-------------pfd~-----~ 684 (1005)
+. +.+.||...| .|+. .
T Consensus 170 a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~g~lt~ 249 (400)
T TIGR02430 170 AEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTA 249 (400)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCCCCEec
Confidence 00 0111121111 1221 1
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
.|--.++||++++||.+.+.|.+.|.+++++|+|++...+.. .+...+...++++||++||++|+||||+|.|
T Consensus 250 ~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~DID~~ei~-- 322 (400)
T TIGR02430 250 GNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP-----RIMGIGPVPATQKLLARAGLSIDQFDVIELN-- 322 (400)
T ss_pred cccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCC-----ccccchHHHHHHHHHHHhCCCHHHCCCcccC--
Confidence 122225999999999999999999999999999998765322 1233466789999999999999999999954
Q ss_pred CCCCCCHHHHH--HHHHHhccCCCCCCceeEeccCCC--cCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 765 GTKLGDPVEIN--ALHDVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 765 gt~~gD~~E~~--al~~~~~~~~~~~~~~~igsvK~~--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
|+.+.. +..+.|+-... ..+|.+.|+. +||+.+|+|+..++.++.+|+..
T Consensus 323 -----D~f~~~~l~~~e~lG~~~~---~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~------------------ 376 (400)
T TIGR02430 323 -----EAFAAQALAVLRELGLADD---DARVNPNGGAIALGHPLGASGARLVLTALRQLERS------------------ 376 (400)
T ss_pred -----cHHHHHHHHHHHHcCCCCC---CCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc------------------
Confidence 775544 44566763211 1478888885 79999999999999999999862
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..++..++.-.-||.-..+|||.
T Consensus 377 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 399 (400)
T TIGR02430 377 ------------------GGRYALCTMCIGVGQGIALAIER 399 (400)
T ss_pred ------------------CCCEEEEEEccccChhhEEEEEe
Confidence 12455566556677777888874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=173.85 Aligned_cols=216 Identities=11% Similarity=0.028 Sum_probs=153.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||+++++.|+++|.+++++.++.. ..+....+++..+.++.++.+|++|++++.++++++.+.+++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999987555544332 334455566666777889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----CCCCChh
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-----GDFGSCD 220 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-----g~~g~~~ 220 (1005)
+|.||||||... .. .. ++...+++|+.|++++.+.+.|+|+ ..+.||++||..+.. +.+.+..
T Consensus 85 ~d~vi~~ag~~~-~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~~~~~~~~ 152 (248)
T PRK07806 85 LDALVLNASGGM-ES---GM---DEDYAMRLNRDAQRNLARAALPLMP-----AGSRVVFVTSHQAHFIPTVKTMPEYEP 152 (248)
T ss_pred CcEEEECCCCCC-CC---CC---CcceeeEeeeHHHHHHHHHHHhhcc-----CCceEEEEeCchhhcCccccCCccccH
Confidence 999999998643 22 11 2456889999999999999988752 235799999965532 2355678
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc----cchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|++++.+++.++.+.. ..++++++|..|...+ .+... .................++++..+.+..++..
T Consensus 153 Y~~sK~a~e~~~~~l~~~~~--~~~i~v~~v~pg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 229 (248)
T PRK07806 153 VARSKRAGEDALRALRPELA--EKGIGFVVVSGDMIEG-TVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTA 229 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhh--ccCeEEEEeCCccccC-chhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhc
Confidence 99999999999998876533 3456888887654432 22111 00000000111112457888888888888764
Q ss_pred c
Q psy612 297 D 297 (1005)
Q Consensus 297 ~ 297 (1005)
+
T Consensus 230 ~ 230 (248)
T PRK07806 230 P 230 (248)
T ss_pred c
Confidence 4
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-16 Score=169.72 Aligned_cols=215 Identities=17% Similarity=0.134 Sum_probs=159.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++++||||+||||..+++.|+++|+.++++.++.+..++..+.+...+ .+.++.||+++++++.++++++...++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999965555443333333334444433 58889999999999999999998889999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~g~~~Yaaan 225 (1005)
|.+||++|... ...+.+ .++++.+++.|+.+.+.+.+.++|+|+ +.+.||++||..+.. +.+....|+++|
T Consensus 83 d~ii~~ag~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~~~~~Y~~sK 154 (238)
T PRK05786 83 DGLVVTVGGYV-EDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLK-----EGSSIVLVSSMSGIYKASPDQLSYAVAK 154 (238)
T ss_pred CEEEEcCCCcC-CCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHh-----cCCEEEEEecchhcccCCCCchHHHHHH
Confidence 99999999765 333333 388999999999999999999999863 236799999987754 456778899999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.+++.++.+.. ..++++++|.++.+. +.|... .... .....+....++++..+.+..++..
T Consensus 155 ~~~~~~~~~~~~~~~--~~gi~v~~i~pg~v~-~~~~~~--~~~~-~~~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 155 AGLAKAVEILASELL--GRGIRVNGIAPTTIS-GDFEPE--RNWK-KLRKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEecCccC-CCCCch--hhhh-hhccccCCCCCHHHHHHHHHHHhcc
Confidence 999999988876632 234588888876554 333211 0001 1112233457888999888888753
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=183.68 Aligned_cols=250 Identities=22% Similarity=0.244 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC-CCCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~Gps~~v~taCs 628 (1005)
...|+.+++++||+|||+++++++ ++++|....... ....+.+++..+|+ ..|.++|+.+|+
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~-------------~~~~a~~va~~lGl~~~~~~~v~~~c~ 78 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF-------------QSFPGALIAEYLGLLGKPATRVEAAGA 78 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc-------------ccchHHHHHHHcCCCCcceeeEeCccH
Confidence 367889999999999999887665 777776433211 12356788999999 569999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHH---H------HHH---HcCCCC-----------------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAY---I------AMT---SAGMLS----------------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~---~------~~~---~~~~ls----------------------- 673 (1005)
|++.|+++|++.|++|++|.+||+|++.+...... . .+. ..+.+.
T Consensus 79 sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~ 158 (375)
T cd00829 79 SGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDL 158 (375)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999999999999854321000 0 000 011111
Q ss_pred --------------CCCC----------------CcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeecc
Q psy612 674 --------------PDGK----------------CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY 723 (1005)
Q Consensus 674 --------------~~g~----------------~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~ 723 (1005)
|... +.|+. ..|.-.++||++++||.+.+.|.+. .++++.|+|++..+
T Consensus 159 ~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~ 236 (375)
T cd00829 159 AKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAAS 236 (375)
T ss_pred HHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEec
Confidence 0000 11221 1344467999999999999999877 66789999999988
Q ss_pred CCCCCCCCC--CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC-----------CCCCC
Q psy612 724 DGKTNGITA--PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQK 789 (1005)
Q Consensus 724 dG~~~~~~~--p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~-----------~~~~~ 789 (1005)
+.....-.. ....+...++++||++||++++|||++|.|.+.|. .++..++.. |... .....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G 312 (375)
T cd00829 237 DTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKGEGGKLVREGDTAIGG 312 (375)
T ss_pred CCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCchHHHHHCCCccCCC
Confidence 875432211 24577789999999999999999999999999986 444444433 2211 11112
Q ss_pred ceeEeccCCCc--CchhhchhhHHHHHHHHHhhcC
Q psy612 790 FCAITSNKSNI--GHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 790 ~~~igsvK~~i--GH~~~AaG~~~lik~~l~l~~~ 822 (1005)
.++|....+.+ ||+.+|+|+..++.++.+|+..
T Consensus 313 ~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 313 DLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred CccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence 23453333332 9999999999999999999874
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=182.24 Aligned_cols=261 Identities=17% Similarity=0.181 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 552 RHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 552 rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.|.-++..++|+ |+|+.+++++ .|++|....... ....++..++...||.+ |+++|+.+|+
T Consensus 28 ~L~~~a~~~al~r~a~i~~~~Id----~vi~G~~~~~~~------------~g~~~ar~~~l~~Gl~~~vp~~tV~~~Ca 91 (400)
T PRK13359 28 DLGAVPLKALVERNPDVDWAAID----DVIYGCANQAGE------------DNRNVARMSLLLAGLPHGVPGSTINRLCG 91 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCC----EEEEEecccccc------------ccccHHHHHHHHcCCCCCCceEEEeccch
Confidence 456778899999 6899988887 788886432110 01346667888889976 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH------HHH----------------------H-------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------YIA----------------------M------------- 666 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~------~~~----------------------~------------- 666 (1005)
||+.|+++|++.|++|++|++||||++.+.. |.. .+. +
T Consensus 92 SG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a 171 (400)
T PRK13359 92 SGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVA 171 (400)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHHHHHHHH
Confidence 9999999999999999999999999996542 310 000 0
Q ss_pred HHcCCC----------C--------CCCCCc-------------------------------------CCCCCCCCce--
Q psy612 667 TSAGML----------S--------PDGKCY-------------------------------------VFDERANGLV-- 689 (1005)
Q Consensus 667 ~~~~~l----------s--------~~g~~~-------------------------------------pfd~~a~G~~-- 689 (1005)
.+.|+- | ++|..+ .|+. +|.+
T Consensus 172 ~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~--~g~lT~ 249 (400)
T PRK13359 172 TDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRP--DGTVTA 249 (400)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCC--CCceec
Confidence 000000 0 111111 1222 2332
Q ss_pred -----ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 690 -----PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 690 -----~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
++||++++||.+.+.|.+.|.++++.|.|++..... ..+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~al~~AGl~~~DID~iei~-- 322 (400)
T PRK13359 250 GNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE-----PRVMGIGPAPATQKLLARLGMTLDQFDVIELN-- 322 (400)
T ss_pred ccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CCccchhHHHHHHHHHHHhCCCHHHcCcCccC--
Confidence 589999999999999999999999999999886311 22344566899999999999999999999955
Q ss_pred CCCCCCHHHHHHHH--HHhccCCCCCCceeEeccCCC--cCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 765 GTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 765 gt~~gD~~E~~al~--~~~~~~~~~~~~~~igsvK~~--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
|..+...+. +.|+-.. ...+|.+.|+. +||+.+|+|+..++.++.+|+..
T Consensus 323 -----dafa~~~l~~~e~lg~~~---~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~------------------ 376 (400)
T PRK13359 323 -----EAFASQGLAVLRELGLAD---DDARVNPNGGAIALGHPLGASGARLVTTALYQLERT------------------ 376 (400)
T ss_pred -----cHhHHHHHHHHHHcCCCC---CCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc------------------
Confidence 777765544 4454211 12578889996 79999999999999999999762
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-..+|||.
T Consensus 377 ------------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 ------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred ------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12455566666777777888874
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=183.00 Aligned_cols=270 Identities=20% Similarity=0.244 Sum_probs=186.9
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Cccccc
Q psy612 547 MDPRQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAIN 624 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledA-G~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~ 624 (1005)
+++ ..|+.+++.+||+|| |+++++++ +|++|....... .+ ...+..++..+|+.+ |+++|+
T Consensus 25 ~~~-~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~~---------~g---~~~~~~~a~~lGl~~~p~~~v~ 87 (406)
T PRK07851 25 MRP-DDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGGE---------QG---FNMARVVAVLLGYDFLPGTTVN 87 (406)
T ss_pred CCH-HHHHHHHHHHHHHhccCCCHHHCC----EEEEEccccccc---------cc---CCHHHHHHHHcCCCCCCeeeee
Confidence 444 578899999999997 99998887 788874321100 01 124567889999987 999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH------------HHH---------------HHHH--------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------AYI---------------AMTS-------- 668 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~------------~~~---------------~~~~-------- 668 (1005)
++|+|++.|++.|+++|++|+||.+||+|++.+.. |. .+. .+..
T Consensus 88 ~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (406)
T PRK07851 88 RYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLP 167 (406)
T ss_pred ccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccccc
Confidence 99999999999999999999999999999874211 10 000 0000
Q ss_pred ---cCC------------CC-------------------CCCC---------------------Cc-CCCC---------
Q psy612 669 ---AGM------------LS-------------------PDGK---------------------CY-VFDE--------- 683 (1005)
Q Consensus 669 ---~~~------------ls-------------------~~g~---------------------~~-pfd~--------- 683 (1005)
..+ ++ .+++ .| +++.
T Consensus 168 ~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~v 247 (406)
T PRK07851 168 DVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKPV 247 (406)
T ss_pred cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCCc
Confidence 000 00 0110 00 0100
Q ss_pred -CCCCc-------eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy612 684 -RANGL-------VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPED 755 (1005)
Q Consensus 684 -~a~G~-------~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~ 755 (1005)
+.+|. .++||++++||.+.+.|.+.|++++++|+|++...+.. .+...+...++++||++||++|+|
T Consensus 248 ~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~d 322 (406)
T PRK07851 248 FRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSIDD 322 (406)
T ss_pred cCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHHH
Confidence 01122 24999999999999999999999999999998764321 122335678999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccc
Q psy612 756 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 835 (1005)
Q Consensus 756 I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~ 835 (1005)
|||+|.|...|. .|+..++ .|+-.. .|+.+.+-+..+||+.+|+|+..++.++.+|+.+
T Consensus 323 id~~ei~d~f~~----~~l~~le-~lg~~~---~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~------------- 381 (406)
T PRK07851 323 IDLVEINEAFAA----QVLPSAR-ELGIDE---DKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH------------- 381 (406)
T ss_pred CCeehhhhHHHH----HHHHHHH-HhCCCc---cccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 999998744432 2332222 333111 1345566677779999999999999999999762
Q ss_pred ccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 836 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 836 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+.++.+++..+-||.-..+|||..
T Consensus 382 -----------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -----------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -----------------------CCCeEEEEEccccChhhEEEEEec
Confidence 114566777788899999999853
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=182.08 Aligned_cols=261 Identities=20% Similarity=0.239 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHH-HHHHhCCCC--Cccccccc
Q psy612 551 QRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSAR-LAYFMDLKG--PVMAINTA 626 (1005)
Q Consensus 551 ~rl~L~~a~~AledA-G~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~r-is~~~~l~G--ps~~v~ta 626 (1005)
.-|..+++.+||+|+ |+++++++ .|++|+...+.. . ...+.| +....|+.. |+++|+++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~------------~-~~~~ar~~~~~~Gl~~~~p~~~V~~a 94 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAE------------Q-GLNVARIGALLAGLPNSVGGVTVNRF 94 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCC------------C-CchHHHHHHHHcCCCCCCceeeecch
Confidence 567889999999997 99988887 788886543211 0 122344 455568863 79999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---H---H-HHHH--------------------HcCCCC-----
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---A---Y-IAMT--------------------SAGMLS----- 673 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---~---~-~~~~--------------------~~~~ls----- 673 (1005)
|+|++.|+++|++.|++|++|.+||+|++.+.. |. . . ..+. +.|+-.
T Consensus 95 CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~ 174 (399)
T PRK09052 95 CASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDA 174 (399)
T ss_pred hhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999999985432 10 0 0 0000 001000
Q ss_pred ------------CC-CCCc----CCCC-----------------------------------------CCCC-------c
Q psy612 674 ------------PD-GKCY----VFDE-----------------------------------------RANG-------L 688 (1005)
Q Consensus 674 ------------~~-g~~~----pfd~-----------------------------------------~a~G-------~ 688 (1005)
+. |.-+ |.+. ..+| -
T Consensus 175 ~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s 254 (399)
T PRK09052 175 FALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSS 254 (399)
T ss_pred HHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccC
Confidence 11 1110 1110 1113 3
Q ss_pred eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.++||++++||.+.+.|.+.|.++++.|.|++...+.- .+...+...++++||++||++|+||||+|.|
T Consensus 255 ~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~A~~~al~~Agi~~~did~~ei~------ 323 (399)
T PRK09052 255 QTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPP-----EIMGIGPIEAIPAALKQAGLKQDDLDWIELN------ 323 (399)
T ss_pred CCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCC-----CccchhHHHHHHHHHHHcCCCHHHcCEEEeC------
Confidence 46999999999999999999999999999999874321 1223356789999999999999999999965
Q ss_pred CCHHHHHH--HHHHhccCCCCCCceeEeccCC--CcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 769 GDPVEINA--LHDVFKNKTYNQKFCAITSNKS--NIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 769 gD~~E~~a--l~~~~~~~~~~~~~~~igsvK~--~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
|+.+.+. ..+.|+-.. .+|...++ .+||+.+|+|+..++..+++|+++
T Consensus 324 -D~f~~~~l~~~e~lg~~~-----~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~---------------------- 375 (399)
T PRK09052 324 -EAFAAQSLAVIRDLGLDP-----SKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT---------------------- 375 (399)
T ss_pred -cHHHHHHHHHHHHhCCCC-----cccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc----------------------
Confidence 7755443 445565321 14555555 569999999999999999999873
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-..+|||.
T Consensus 376 --------------~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 376 --------------NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred --------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12456677777788888898884
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=170.03 Aligned_cols=176 Identities=15% Similarity=0.103 Sum_probs=139.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++++||||+||||++++++|+++|+++ +++.|++...+ .+++. .++.++.+|++|+++++++++.+.. +++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V-~~~~r~~~~~~---~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQV-TATVRGPQQDT---ALQAL-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEE-EEEeCCCcchH---HHHhc-cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence 689999999999999999999999854 54555543222 22222 2467788999999999999988854 58999
Q ss_pred EEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---CCChhhhHH
Q psy612 149 VLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---FGSCDYAMG 224 (1005)
Q Consensus 149 vIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~---~g~~~Yaaa 224 (1005)
||||||+... ..++.+.+.+++++++.+|+.+++.+.+.+.++|++ ..+.++++||..+..+. .+...|+++
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~iv~~ss~~g~~~~~~~~~~~~Y~~s 150 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP----GQGVLAFMSSQLGSVELPDGGEMPLYKAS 150 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh----cCCEEEEEccCccccccCCCCCccchHHH
Confidence 9999998642 345778899999999999999999999999988642 23689999998776543 356789999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.|++.++.+.. ..++++.+|.+|...
T Consensus 151 K~a~~~~~~~l~~e~~--~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 151 KAALNSMTRSFVAELG--EPTLTVLSMHPGWVK 181 (225)
T ss_pred HHHHHHHHHHHHHHhh--cCCeEEEEEcCCcee
Confidence 9999999999887743 356788899887663
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-16 Score=166.94 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=157.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+|+||+.++++|+++ .+ |+++.|+... .+++......+.++.+|++|+++++++++. ++++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id 73 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HT-LLLGGRPAER---LDELAAELPGATPFPVDLTDPEAIAAAVEQ----LGRLD 73 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CC-EEEEeCCHHH---HHHHHHHhccceEEecCCCCHHHHHHHHHh----cCCCC
Confidence 478999999999999999999999 65 5555555321 112221123477899999999998887765 35899
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+|||+||... ...+.+.+.++|.+.+++|+.+.+.+.+.+++.|++ ..++||++||..+..+.++...|+++|.+
T Consensus 74 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~~~v~~ss~~~~~~~~~~~~y~~~K~a 148 (227)
T PRK08219 74 VLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA----AHGHVVFINSGAGLRANPGWGSYAASKFA 148 (227)
T ss_pred EEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh----CCCeEEEEcchHhcCcCCCCchHHHHHHH
Confidence 9999999876 567778899999999999999999999999888643 24689999999999889999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++.+++.++.+.. .. +++.+|.||.+.+..+ ....... .....+...+++++..+.+..++..+.
T Consensus 149 ~~~~~~~~~~~~~--~~-i~~~~i~pg~~~~~~~-~~~~~~~--~~~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 149 LRALADALREEEP--GN-VRVTSVHPGRTDTDMQ-RGLVAQE--GGEYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred HHHHHHHHHHHhc--CC-ceEEEEecCCccchHh-hhhhhhh--ccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 9999998876532 22 6888999887754221 1100000 001112235789999999988886543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-16 Score=166.25 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=151.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++++||||+|+||+.++++|+++|+++++ +.|+.. ..+++...+ +.++.+|+++.++++++++.+.. +++|+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~-~~r~~~---~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~--~~~d~ 73 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIA-TARDAA---ALAALQALG--AEALALDVADPASVAGLAWKLDG--EALDA 73 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEE-EECCHH---HHHHHHhcc--ceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence 68999999999999999999999987555 455432 123344333 46789999999999998877643 47999
Q ss_pred EEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh---hhhHH
Q psy612 149 VLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC---DYAMG 224 (1005)
Q Consensus 149 vIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~---~Yaaa 224 (1005)
||||||.... ...+.+.+.++|++.+++|+.+++++.+++.|+|++ ..++||++||.++..+..... .|+++
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~~~~Y~~s 149 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA----AGGVLAVLSSRMGSIGDATGTTGWLYRAS 149 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc----cCCeEEEEcCcccccccccCCCccccHHh
Confidence 9999998631 345667799999999999999999999999988642 246899999998887754433 59999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
|++++.+++.++.+. .++++++|.+|.. ++.|.. ...++++++....+..++....
T Consensus 150 K~a~~~~~~~~~~~~----~~i~v~~v~Pg~i-~t~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
T PRK06953 150 KAALNDALRAASLQA----RHATCIALHPGWV-RTDMGG-------------AQAALDPAQSVAGMRRVIAQAT 205 (222)
T ss_pred HHHHHHHHHHHhhhc----cCcEEEEECCCee-ecCCCC-------------CCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999887652 2457888887755 333421 1225788888888888776543
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.6e-16 Score=178.25 Aligned_cols=264 Identities=19% Similarity=0.225 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.-|+.+++.+||+|||..+++++ .|++|....+.. ....++..++..+|+.+ |.++|+++|+
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~~------------~g~~~a~~~~~~lGl~~~~p~~~V~~aCa 91 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEAE------------QGLNMARNIGALAGLPYTVPAITINRYCS 91 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC----EEEEEecccccc------------ccchHHHHHHHHcCCCCCcceeehhhhhh
Confidence 56778999999999997666665 688885432210 01223446888999984 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-H-----------------HHH--H------HHHHcCCCC---------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P-----------------EAY--I------AMTSAGMLS--------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~-----------------~~~--~------~~~~~~~ls--------- 673 (1005)
|++.|++.|++.|++|++|.+||+|++.+.. | ..+ + ...+.|+-.
T Consensus 92 SG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a~~av~ 171 (391)
T PRK07661 92 SGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVR 171 (391)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999999999999999985431 1 000 0 001111110
Q ss_pred --------CC-CCC---------------------------------------------cC-CC-----CCCCCceecCc
Q psy612 674 --------PD-GKC---------------------------------------------YV-FD-----ERANGLVPSEA 693 (1005)
Q Consensus 674 --------~~-g~~---------------------------------------------~p-fd-----~~a~G~~~gEG 693 (1005)
|. |.- +| |. ...|--.++||
T Consensus 172 s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~~~DG 251 (391)
T PRK07661 172 SHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDG 251 (391)
T ss_pred HHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCCCCCc
Confidence 11 110 00 10 11122235999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
++++||.+.+.|.+.|.+++++|+|++..++.. .+...+...+++++|++||++|+||||+|.| |+.+
T Consensus 252 Aaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~-------d~f~ 319 (391)
T PRK07661 252 AAAVLLMDREKAESDGLKPLAKFRSFAVAGVPP-----EVMGIGPIAAIPKALKLAGLELSDIGLFELN-------EAFA 319 (391)
T ss_pred eEEEEEecHHHHHHCCCCceEEEEEEEEecCCC-----cccchHHHHHHHHHHHHcCCCHHHCCEEEeC-------CHHH
Confidence 999999999999999999999999999875421 1223466889999999999999999999955 8888
Q ss_pred HHHHHH--HhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccc
Q psy612 774 INALHD--VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 851 (1005)
Q Consensus 774 ~~al~~--~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~ 851 (1005)
...|.. .|+-.. .++.+..-+..+||+.+|+|+..++.++.+|+.+
T Consensus 320 ~~~l~~~e~lg~~~---~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~----------------------------- 367 (391)
T PRK07661 320 SQSIQVIRELGLDE---EKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR----------------------------- 367 (391)
T ss_pred HHHHHHHHHcCCCC---CCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-----------------------------
Confidence 887774 454221 2345556677779999999999999999999862
Q ss_pred cccccccCccEEEEcccCCCCceEEEEEec
Q psy612 852 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 852 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-..+|||.
T Consensus 368 -------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 -------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred -------CCCeEEEEEccccChhhEEEEEe
Confidence 12456666666778888888874
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=174.92 Aligned_cols=202 Identities=13% Similarity=0.054 Sum_probs=143.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|+++||||+||||+++++.|+++|++++++.++.+.. .+.+...+..+..+.+|++|++++.+. ++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l---~~~~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~I 246 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKI---TLEINGEDLPVKTLHWQVGQEAALAEL-------LEKV 246 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHhhcCCCeEEEEeeCCCHHHHHHH-------hCCC
Confidence 478999999999999999999999999766665543322 222333334577889999999876543 4689
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~-~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|++|||||+.. . .+.+.+++++++++|+.|++.+.++++|.|++.+.. ..+.+|+.|| ++ .+.+..+.|+++|
T Consensus 247 DiLInnAGi~~-~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASK 320 (406)
T PRK07424 247 DILIINHGINV-H---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSK 320 (406)
T ss_pred CEEEECCCcCC-C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHH
Confidence 99999999754 2 367899999999999999999999999998642211 1234555554 43 3334567899999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVL 304 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~ 304 (1005)
+++.+|++.++.. .+. .+..+..|++.. .|. ....++++++++.+...+..+...+.+.
T Consensus 321 aAl~~l~~l~~~~---~~~--~I~~i~~gp~~t-~~~--------------~~~~~spe~vA~~il~~i~~~~~~i~v~ 379 (406)
T PRK07424 321 RALGDLVTLRRLD---APC--VVRKLILGPFKS-NLN--------------PIGVMSADWVAKQILKLAKRDFRNIIVT 379 (406)
T ss_pred HHHHHHHHHHHhC---CCC--ceEEEEeCCCcC-CCC--------------cCCCCCHHHHHHHHHHHHHCCCCEEEeC
Confidence 9999998644432 133 333444565532 221 1235899999999999998877655543
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=182.97 Aligned_cols=266 Identities=20% Similarity=0.204 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchhH
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 630 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsSs 630 (1005)
..|+.+++.+||+|||+++++++ .|++|+....+.. .. .....+ .+.--++.+-|+++|+++|+|+
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID----~vi~g~~~~~~~~--------~~-~~~~~~-~l~a~~~~~~p~~~V~~~CaSg 98 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID----DIITGCALQVGEN--------WL-YGGRHP-IFLARLPYNIPAMAVDRQCASS 98 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eeEEEeecCCCcc--------cc-cHHHHH-HHHcCCCCCCcchhhhhhhHHH
Confidence 46788999999999999998887 6888865432110 00 001111 1222233457999999999999
Q ss_pred HHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-----------HH---------------HH------HHHcCCCC----
Q psy612 631 LVATHIACQSLRQHECDTAISAGVNLMIS-PE-----------AY---------------IA------MTSAGMLS---- 673 (1005)
Q Consensus 631 l~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-----------~~---------------~~------~~~~~~ls---- 673 (1005)
+.|++.|+++|++|++|.+||+|++.+.. |. .. +. ..+.|+-.
T Consensus 99 ~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a 178 (394)
T PRK06445 99 LTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMD 178 (394)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHH
Confidence 99999999999999999999999984321 10 00 00 00000000
Q ss_pred --------------CCCCC------------------cC-------------------CCC-----CCCCceecCccEEE
Q psy612 674 --------------PDGKC------------------YV-------------------FDE-----RANGLVPSEAVVAV 697 (1005)
Q Consensus 674 --------------~~g~~------------------~p-------------------fd~-----~a~G~~~gEGa~~v 697 (1005)
++|.- .| |+. ..|--.++||++++
T Consensus 179 ~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaav 258 (394)
T PRK06445 179 RWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYV 258 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEE
Confidence 11110 11 110 01122349999999
Q ss_pred EEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q psy612 698 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL 777 (1005)
Q Consensus 698 vLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al 777 (1005)
||.+.+.|.+.|++++++|+|++...+.. .+...+...++++||++||++|+||||+|.|...+. .|+..+
T Consensus 259 vl~s~~~A~~~~~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~----~~l~~~ 329 (394)
T PRK06445 259 LLMSKKAVKKYGLKPMAKIRSFGFAGVPP-----AIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV----VVLYAI 329 (394)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEeccCC-----chhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH----HHHHHH
Confidence 99999999999999999999999875421 123346688999999999999999999999997764 666666
Q ss_pred HHHh-ccCCCCCCceeE-eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccc
Q psy612 778 HDVF-KNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 855 (1005)
Q Consensus 778 ~~~~-~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~ 855 (1005)
+..- ... ++-+ |..++ +||+.+|+|+..++.++.+|+.
T Consensus 330 e~lg~~~~-----~vN~~GG~la-~Ghp~gatG~~~v~e~~~qL~~---------------------------------- 369 (394)
T PRK06445 330 KELGLDPE-----TVNIKGGAIA-IGHPLGATGARIVGTLARQLQI---------------------------------- 369 (394)
T ss_pred HHhCCCcc-----ccCCCCCHHH-cCCCccchHHHHHHHHHHHHHh----------------------------------
Confidence 6552 221 2222 44444 4999999999999999999971
Q ss_pred cccCccEEEEcccCCCCceEEEEEec
Q psy612 856 VNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 856 ~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
...|+++++.-|-||..+.+|||.
T Consensus 370 --~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 --KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred --cCCCEEEEEEcccCChhhEEEEEc
Confidence 123677888888899999999984
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-16 Score=181.54 Aligned_cols=221 Identities=17% Similarity=0.244 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
...++.+++.+||++||+.++++. .+++++...++. . ...+.++...+++++|++.++.+|+|
T Consensus 95 ~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~--------~-----p~~a~~v~~~Lgl~~~~~~v~~aCas 157 (372)
T PRK07515 95 QAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA--------Y-----PAMAIEIQQALGIEGFAFDMNVACSS 157 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC--------C-----cHHHHHHHHhcCCCCcEEEecchhHH
Confidence 356899999999999999887775 567765432211 1 11356788999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||..|++.|++|.+|.+||+|++..... . -|+....++++|||++++||++.+++.+++
T Consensus 158 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-------~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~ 219 (372)
T PRK07515 158 ATFGIQTAANAIRSGSARRVLVVNPEICSGH-----------L-------NFRDRDSHFIFGDVATAVIVERADTATSAG 219 (372)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeeeccccc-----------c-------cccCCCCCEEecCccEEEEEeeccccccCC
Confidence 9999999999999999999999999863211 1 122334689999999999999877664333
Q ss_pred -CceEEEEEEeeecc-----CCCC-----CCCCCC------CHH--------HHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 710 -DPIHAIIRGSGINY-----DGKT-----NGITAP------NGI--------SQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 710 -~~I~avI~g~~~~~-----dG~~-----~~~~~p------~~~--------~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
..|++....+...+ .|.. .....+ ++. ...++|+++|+++|++++||+|+-+|.+
T Consensus 220 ~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~ 299 (372)
T PRK07515 220 GFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA 299 (372)
T ss_pred CceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 25666542211000 1110 011111 222 2468899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHH
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~l 812 (1005)
++++.|.+ ++++|+-...... .+. +=..+||+.+|+=...|
T Consensus 300 ~~~~~d~~----~~~llg~~~~~~~-~~~--~~~~~GNt~sasi~~~L 340 (372)
T PRK07515 300 NINMNQLI----GKKVLGRDATPEE-APV--ILDEYANTSSAGSIIAF 340 (372)
T ss_pred CHHHHHHH----HHHhccCCCChhh-ceE--eHHhcCCchhhHHHHHH
Confidence 99988876 3344553221111 121 23567999988754444
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.4e-16 Score=177.48 Aligned_cols=263 Identities=18% Similarity=0.198 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccchh
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACSS 629 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCsS 629 (1005)
-|..+++.++|+++|+++++++ -|++|+....... ...++...+...|+. =|+++|+.+|+|
T Consensus 30 dLa~~A~~~al~~agi~p~~ID----~vi~G~~~~~~~~------------~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaS 93 (402)
T PRK08242 30 RLAAGLLEALRDRNGLDTAAVD----DVVLGCVTPVGDQ------------GADIARTAVLAAGLPETVPGVQINRFCAS 93 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCccc------------cccHHHHHHHHcCCCCCCCeEEEcchhhh
Confidence 4667889999999999988876 6788865432110 122333445666883 499999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH------------HHH--H-----------HHcC-------------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------------YIA--M-----------TSAG------------- 670 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~------------~~~--~-----------~~~~------------- 670 (1005)
++.||+.|+++|++|+.|.+||+|++.+.. |.. ... + .+.|
T Consensus 94 g~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~S 173 (402)
T PRK08242 94 GLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAVES 173 (402)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999999999999999999986432 210 000 0 0000
Q ss_pred -----------C----------------CCCCCCCc-------------CCCCCC--CC---------------------
Q psy612 671 -----------M----------------LSPDGKCY-------------VFDERA--NG--------------------- 687 (1005)
Q Consensus 671 -----------~----------------ls~~g~~~-------------pfd~~a--~G--------------------- 687 (1005)
. +.+|...| .|+... +|
T Consensus 174 h~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~~~~vTa 253 (402)
T PRK08242 174 QQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHA 253 (402)
T ss_pred HHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccccCceec
Confidence 0 12222222 244321 23
Q ss_pred ---ceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 688 ---LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 688 ---~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
-.+++|++++||.+.+.|.+.|.++++.|.|++...+......+.| ..+++++|+++|++|+||||+|.|
T Consensus 254 gn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~-----~~a~~~al~~AGl~~~DID~~ei~-- 326 (402)
T PRK08242 254 GNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGP-----VPATRKALAKAGLTVDDIDLFELN-- 326 (402)
T ss_pred CcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccH-----HHHHHHHHHHcCCCHHHCCEEEec--
Confidence 2578999999999999999999999999999988755322222233 569999999999999999999987
Q ss_pred CCCCCCHHHHHHH--HHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 765 GTKLGDPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 765 gt~~gD~~E~~al--~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
|+.+...+ .+.|+-. ..++.+..-+..+||+.+|+|+..++.++.+|+.+
T Consensus 327 -----daFa~~~l~~~e~lG~~---~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~-------------------- 378 (402)
T PRK08242 327 -----EAFASVVLRFMQALDIP---HDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR-------------------- 378 (402)
T ss_pred -----chhhHHHHHHHHHhCCC---CcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence 55555444 3445421 12456667777889999999999999999999762
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++.-.-||.-..+|||.
T Consensus 379 ----------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 ----------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred ----------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12455566556678888888874
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.8e-16 Score=178.04 Aligned_cols=277 Identities=18% Similarity=0.224 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
...|..+++.+||+|||+++++++. +++|...++.. ....++..+|++| |+++|+++|+
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~----~~~g~~~~~~~----------------~~~~~~~~lGl~~~~~~~v~~~ca 81 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQ----AYVGYVYGDST----------------SGQRALYEVGMTGIPIVNVNNNCS 81 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCe----eEEEEEeCCcc----------------hhHHHHHHcCCCCCCCcccccccH
Confidence 4689999999999999999888763 45553322110 0113566789999 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH---------HHHHH-------H-cCCCC-----------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA---------YIAMT-------S-AGMLS----------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~---------~~~~~-------~-~~~ls----------------- 673 (1005)
|++.||.+|+++|++|+||.+||+|++.+.. +.. +..+. . .+...
T Consensus 82 Sg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G 161 (391)
T PRK08256 82 TGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYG 161 (391)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999886421 100 00000 0 00100
Q ss_pred --------------CCCCCcCCCC---------------------CCCCceecCccEEEEEcccchhhcCCCceEEEEEE
Q psy612 674 --------------PDGKCYVFDE---------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRG 718 (1005)
Q Consensus 674 --------------~~g~~~pfd~---------------------~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g 718 (1005)
..+.-.|... ..|--.+++|++++||.+.+.|.+-+-+.+++|.|
T Consensus 162 ~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g 241 (391)
T PRK08256 162 TTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVA 241 (391)
T ss_pred CCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEE
Confidence 0000111100 01111248999999999999998766456788999
Q ss_pred eeeccCCCCC-CC---CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC--------
Q psy612 719 SGINYDGKTN-GI---TAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-------- 784 (1005)
Q Consensus 719 ~~~~~dG~~~-~~---~~p-~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~-------- 784 (1005)
.+...+.... .. ... ...+...+.+++|+++|++++|||++|.|...|. .|+..++.. |...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le~lg~~~~Ge~~~~~~ 317 (391)
T PRK08256 242 QAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYEALGLCPEGEAEKFID 317 (391)
T ss_pred EEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHHHcCCCCCCchHHHHH
Confidence 8877653211 11 001 1234567999999999999999999999999885 555555443 2211
Q ss_pred ---CCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccccccc
Q psy612 785 ---TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNE 858 (1005)
Q Consensus 785 ---~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~ 858 (1005)
......+|| |..++. ||+.+|+|+..++.++.+|+.+-=..++ .
T Consensus 318 ~G~~~~~G~~pvN~~GG~ls~-Ghp~gasG~~~~~e~~~QL~g~ag~~Qv-----------------------------~ 367 (391)
T PRK08256 318 DGDNTYGGRWVVNPSGGLLSK-GHPLGATGLAQCAELTWQLRGTAGARQV-----------------------------E 367 (391)
T ss_pred CCCccCCCCeeeCCCCccccC-CCCccHHHHHHHHHHHHHhcCCcCCCcC-----------------------------C
Confidence 112233455 555655 9999999999999999999875211110 1
Q ss_pred CccEEEEcccCCCCceEEEEEe
Q psy612 859 KLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 859 ~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+++.++++|.|.++.-.||+
T Consensus 368 ~~~~~l~~~~G~~~~~~~~v~~ 389 (391)
T PRK08256 368 GARLALQHNLGLGGACVVTLYQ 389 (391)
T ss_pred ccceEEEeccccceeEEEEEEe
Confidence 2467889999955555555554
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=177.79 Aligned_cols=268 Identities=23% Similarity=0.295 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.-|+.+++.+||+|||+++++++ +|++|+....+.. ....+..++..+|+.+ |.++|+++|+
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID----~vv~G~~~~~~~~------------~~~~~r~~a~~~Gl~~~~pa~~V~~~Ca 135 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG----DIVVGTVLAPGSQ------------RANECRMAAFYAGFPETVPVRTVNRQCS 135 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCcccc------------cchHHHHHHHHCCCCCCcceEEEeccCc
Confidence 56789999999999999998887 6888865432210 0112234556779975 8899999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHH--------------------H------HHHHcCCCC--------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY--------------------I------AMTSAGMLS-------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~--------------------~------~~~~~~~ls-------- 673 (1005)
|++.|++.|+++|++|++|++||+|++.+.. |... + ...+.|+-.
T Consensus 136 SG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAv 215 (452)
T PLN02287 136 SGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAV 215 (452)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999999975432 1000 0 000111110
Q ss_pred ---------CC-CCCc---------------------CCCCC---------------------------CCCceecCccE
Q psy612 674 ---------PD-GKCY---------------------VFDER---------------------------ANGLVPSEAVV 695 (1005)
Q Consensus 674 ---------~~-g~~~---------------------pfd~~---------------------------a~G~~~gEGa~ 695 (1005)
|. |+.+ +++.+ .|--.++||++
T Consensus 216 ksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAa 295 (452)
T PLN02287 216 ESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAG 295 (452)
T ss_pred HHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceE
Confidence 11 2111 11111 12233699999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
++||.+.+.|.+.|.+|++++.|++... .. ..+...+...++++||++||++|+||||+|.| |+....
T Consensus 296 alvl~see~A~~~~~~~~a~~~~~~~~~--~~---~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~-------daFa~~ 363 (452)
T PLN02287 296 AVLLMKRSVAMQKGLPILGVFRSFAAVG--VD---PAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN-------EAFASQ 363 (452)
T ss_pred EEEEeeHHHHHHCCCCeEEEEEEEeecc--CC---CccchHHHHHHHHHHHHHcCCCHHHCCEEEec-------chHHHH
Confidence 9999999999999999999999987432 11 12234456789999999999999999999999 443333
Q ss_pred HHH--HHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccc
Q psy612 776 ALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853 (1005)
Q Consensus 776 al~--~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w 853 (1005)
.+. +.|+-. ..++.+..-+-.+||+.+|+|+..++.++.+|+..
T Consensus 364 ~l~~~e~lG~~---~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~------------------------------- 409 (452)
T PLN02287 364 FVYCCKKLGLD---PEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR------------------------------- 409 (452)
T ss_pred HHHHHHHcCCC---ccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc-------------------------------
Confidence 332 223311 12344555556679999999999999999999762
Q ss_pred cccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 854 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
+...+++.++--.-||.-..+|||...
T Consensus 410 ---~~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 410 ---GKDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred ---CCCCCeeEEEEccccCceeEEEEEecC
Confidence 000145666666778888999999764
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=177.04 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
..|+.+++.+||+|||+++++++ ++++|+...... + ...+..+....++. -|.++|+++|+
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~~----------~---~~~~~~~~~~~gl~~~~~~~~v~~~Ca 89 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAGA----------G---QNPARQAALKAGLPVEVPALTINKVCG 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCCC----------C---CcHHHHHHHHcCCCCCCceeeecccch
Confidence 57889999999999999998887 778876432110 0 01222245566775 49999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---------------HHHHH--H-HcCCCC----------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIAM--T-SAGMLS---------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---------------~~~~~--~-~~~~ls---------------- 673 (1005)
|++.||..|+++|++|++|.+||+|++.+.. |. ....+ . ..+...
T Consensus 90 sg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG 169 (393)
T PRK05790 90 SGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYG 169 (393)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999885311 00 00000 0 000000
Q ss_pred ---------------------CCCCCc----C----------------------------------CCCC-----CCCce
Q psy612 674 ---------------------PDGKCY----V----------------------------------FDER-----ANGLV 689 (1005)
Q Consensus 674 ---------------------~~g~~~----p----------------------------------fd~~-----a~G~~ 689 (1005)
..|..+ | ||.. .|--.
T Consensus 170 ~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~ 249 (393)
T PRK05790 170 ITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASG 249 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCC
Confidence 000000 1 1110 02235
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||.+.+.|.+.+.+++++|+|++...... .+...+...++++||++||++|+||||+|.|.
T Consensus 250 ~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d------ 318 (393)
T PRK05790 250 INDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDP-----AIMGIGPVPAIRKALEKAGWSLADLDLIEINE------ 318 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----CccchhHHHHHHHHHHHcCCCHHHCCEEEeCc------
Confidence 6899999999999999999999999999998874321 11223456899999999999999999999885
Q ss_pred CHHHHHH--HHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 770 DPVEINA--LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 770 D~~E~~a--l~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
..+... ..+.|+-. ..++.+..-|...||+.+|+|+..++.++.+|+.+
T Consensus 319 -~f~~~~l~~~e~lg~~---~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~------------------------- 369 (393)
T PRK05790 319 -AFAAQALAVEKELGLD---PEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR------------------------- 369 (393)
T ss_pred -HHHHHHHHHHHHhCCC---hhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc-------------------------
Confidence 444443 33445421 12355666677789999999999999999999873
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++.-|-||..+.+|||.
T Consensus 370 -----------~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 370 -----------GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred -----------CCCeEEEEEeccCCceeEEEEEc
Confidence 12667888888899999999985
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=175.46 Aligned_cols=243 Identities=21% Similarity=0.212 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
.-|+.+++.+||+|||+++++++ ++++|.... . ..+..++..+|+++ |.+.++++|+|
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~----------~-------~~~~~la~~lGl~~~~~~~~~~g~~s 87 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD----GLFTASPDD----------A-------LWGLSVAEYLGIRPRFVDGTMIGGSS 87 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCC----------C-------CcHHHHHHHcCCCCeeeccccCccHH
Confidence 46789999999999999988877 677764210 0 11235788889976 78889999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEe-ecccCCC---------------------HHHHHH------HHHcCCC---------
Q psy612 630 SLVATHIACQSLRQHECDTAISA-GVNLMIS---------------------PEAYIA------MTSAGML--------- 672 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvg-gv~~~~~---------------------~~~~~~------~~~~~~l--------- 672 (1005)
++.||+.|++.|++|.+|.+||. |.+.... |...+. +.+.|.-
T Consensus 88 ~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav 167 (384)
T PRK06158 88 FLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAV 167 (384)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 99999999999999999999974 6652210 000000 0011110
Q ss_pred --------CCCC----------------CCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCC
Q psy612 673 --------SPDG----------------KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTN 728 (1005)
Q Consensus 673 --------s~~g----------------~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~ 728 (1005)
.|.- .|.|+.. .|...++||++++||.+.+.|.+.+++. ..|+|++..++....
T Consensus 168 ~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~ 245 (384)
T PRK06158 168 AARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQI 245 (384)
T ss_pred HHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCccc
Confidence 0110 1223322 4555689999999999999998765542 447777766553321
Q ss_pred C-CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hcc-----------CCCCCCceeE--
Q psy612 729 G-ITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKN-----------KTYNQKFCAI-- 793 (1005)
Q Consensus 729 ~-~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~-----------~~~~~~~~~i-- 793 (1005)
. ...+....+..++++||++|||+|+||||+|.|...|. .|+-.+... |.. .......+||
T Consensus 246 ~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~ 321 (384)
T PRK06158 246 SSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNT 321 (384)
T ss_pred ccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccC
Confidence 1 11122355678999999999999999999999999886 455544333 211 1122223444
Q ss_pred -eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 794 -TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 794 -gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
|..|+. ||+ +|+|+..++.++.+|+..
T Consensus 322 sGG~ls~-Ghp-gatG~~~~~E~~~QLrg~ 349 (384)
T PRK06158 322 NGGGLSC-VHP-GMYGLFLLIEAVRQLRGE 349 (384)
T ss_pred CChhhcC-CCC-chhhHHHHHHHHHHHcCC
Confidence 566666 999 999999999999999874
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=175.79 Aligned_cols=264 Identities=16% Similarity=0.169 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccc
Q psy612 551 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taC 627 (1005)
.-|+.++..++|+ |+|+++++++ .|++|..... +.....++..++...|+. =|+++|+++|
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id----~v~~G~~~~~------------~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aC 90 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD----DVIYGCANQA------------GEDNRNVARMSALLAGLPVSVPGTTINRLC 90 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc------------ccccchHHHHHHHHcCCCCCCceEEEeccc
Confidence 4677889999999 7999988876 6888854321 011123454588899994 4999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH------HHH---------------------H-HH-----------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------AYI---------------------A-MT----------- 667 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~------~~~---------------------~-~~----------- 667 (1005)
+||+.|++.|++.|++|++|++||||++.+.. |. ..+ . +.
T Consensus 91 aSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~ 170 (401)
T PRK09050 91 GSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENV 170 (401)
T ss_pred ccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHHHHHHHH
Confidence 99999999999999999999999999996532 21 000 0 00
Q ss_pred --HcCCC-------------------------------------------CCCCCCc------------C-CCC-----C
Q psy612 668 --SAGML-------------------------------------------SPDGKCY------------V-FDE-----R 684 (1005)
Q Consensus 668 --~~~~l-------------------------------------------s~~g~~~------------p-fd~-----~ 684 (1005)
+.|+- ++|...| | |+. -
T Consensus 171 a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~~g~lt~ 250 (401)
T PRK09050 171 AEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTA 250 (401)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccCCCEEeC
Confidence 00000 0111111 1 321 1
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
.|--.++||++++||.+.+.|.+.|.++++.|+|++...+... ....+...+++++|++||++|+|||++|.|
T Consensus 251 ~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~ei~-- 323 (401)
T PRK09050 251 GNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR-----IMGIGPAPATRKLLARLGLTIDQFDVIELN-- 323 (401)
T ss_pred CCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCccccC--
Confidence 1222358999999999999999999999999999988754321 122345789999999999999999999955
Q ss_pred CCCCCCHHHHHHHH--HHhccCCCCCCceeEeccCCC--cCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 765 GTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 765 gt~~gD~~E~~al~--~~~~~~~~~~~~~~igsvK~~--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
|+.+...+. +.|+-.. ...+|...|+. +||+.+|+|+..++.++.+|+.+
T Consensus 324 -----D~f~~~~l~~~e~lg~~~---~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~------------------ 377 (401)
T PRK09050 324 -----EAFAAQGLAVLRQLGLAD---DDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT------------------ 377 (401)
T ss_pred -----cHhHHHHHHHHHHcCCCC---CCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc------------------
Confidence 777775554 3444211 12578888886 79999999999999999999862
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-..+|+|.
T Consensus 378 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 378 ------------------GGRYALCTMCIGVGQGIALAIER 400 (401)
T ss_pred ------------------CCCeEEEEEcccccceeEEEEEe
Confidence 12556677677788888888874
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=173.53 Aligned_cols=267 Identities=17% Similarity=0.201 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 551 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
.-|+.++..+||+ ++|+++++++ .||+|...... .....++..++...++.. |+++|+.+|
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id----~v~~G~~~~~~------------~~g~~~ar~~~~~~g~~~~~p~~tV~~~C 89 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE----DIYWGCVQQTL------------EQGFNIARNAALLAQIPHTSAAVTVNRLC 89 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC----EEEEecccccc------------cccchHHHHHHHHCCCCCCcchhhhhhhh
Confidence 5678899999999 5799988887 78888543100 000124445555666655 779999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH------------------HHHH------HHHcCC-----------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------------AYIA------MTSAGM----------- 671 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~------------------~~~~------~~~~~~----------- 671 (1005)
+||+.|++.|+++|++|++|++||||++.+.. |. ..+. ..+.|+
T Consensus 90 aSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~ 169 (385)
T TIGR02445 90 GSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAAR 169 (385)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999999999999999999985421 10 0000 000010
Q ss_pred --------------------------------CCCCCCCcC-------------CCC------CCCCceecCccEEEEEc
Q psy612 672 --------------------------------LSPDGKCYV-------------FDE------RANGLVPSEAVVAVVLK 700 (1005)
Q Consensus 672 --------------------------------ls~~g~~~p-------------fd~------~a~G~~~gEGa~~vvLk 700 (1005)
++|+...|+ |+. ..|--.++||++++||.
T Consensus 170 sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavvL~ 249 (385)
T TIGR02445 170 SHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVM 249 (385)
T ss_pred HHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEEEe
Confidence 012211111 221 12223359999999999
Q ss_pred ccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH
Q psy612 701 RLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV 780 (1005)
Q Consensus 701 ~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~ 780 (1005)
+.+.|.+.|++++++|+|++.+... ...+ ..+...+++++|+++||+|+||||+|.|...+. .|+..++..
T Consensus 250 s~e~A~~~g~~~~a~I~g~~~~~~~--~~~~---~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~----~~l~~~e~l 320 (385)
T TIGR02445 250 SEQRANELGLKPRARIRSMAVAGCD--PSIM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAA----QALPCLKDL 320 (385)
T ss_pred cHHHHHHCCCCeeEEEEEEEEcCCC--Cccc---chhHHHHHHHHHHHcCCCHHHcCEEEEccccHH----HHHHHHHHc
Confidence 9999999999999999999987421 1111 123467889999999999999999999987764 555555543
Q ss_pred -hccCCCCCCce-eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccccccc
Q psy612 781 -FKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNE 858 (1005)
Q Consensus 781 -~~~~~~~~~~~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~ 858 (1005)
|.... ..++ +-|..++. ||+.+|+|+..++-++..|+. .
T Consensus 321 g~~~~g--~~~vN~~GG~la~-GhP~GATG~r~v~~l~~~l~~------------------------------------~ 361 (385)
T TIGR02445 321 GLLDKM--DEKVNLNGGAIAL-GHPLGCSGARISTTLLNLMEQ------------------------------------K 361 (385)
T ss_pred CCCCCC--CCCcCCCCchhhc-CCCccccHHHHHHHHHHHHHh------------------------------------c
Confidence 11210 0111 23555554 999999997666666633332 0
Q ss_pred CccEEEEcccCCCCceEEEEEec
Q psy612 859 KLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 859 ~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++++++.|-||.-..+|||.
T Consensus 362 ~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 362 DATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred CCCeEEEEEecccChhheEEEEe
Confidence 13567777777788888899885
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=176.81 Aligned_cols=241 Identities=19% Similarity=0.225 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
.-|+.+++.+||+|||+++++++ .|++|.....+. ..+ ++...+...++ +-|+++|+.+|+
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID----~vi~G~~~~~~~------------~~~-~~~~~~l~ag~~~~~p~~~V~~aCa 94 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID----EVVMGCVLPAGQ------------GQA-PARQAALGAGLPLSVGCTTVNKMCG 94 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc------------chH-HHHHHHHcCCCCCCccEeeccccch
Confidence 56789999999999999988887 688886432110 111 22112233344 347799999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH--H-------------HHHH--H---------------------Hc
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE--A-------------YIAM--T---------------------SA 669 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~--~-------------~~~~--~---------------------~~ 669 (1005)
|++.|++.|+++|++|++|.+||+|++.+.. |. . ...+ . +.
T Consensus 95 SG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y 174 (397)
T PRK06954 95 SGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEY 174 (397)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999986541 21 0 0000 0 00
Q ss_pred CCC------------------CCCCCCc----CCCCC------------------------------CCC-------cee
Q psy612 670 GML------------------SPDGKCY----VFDER------------------------------ANG-------LVP 690 (1005)
Q Consensus 670 ~~l------------------s~~g~~~----pfd~~------------------------------a~G-------~~~ 690 (1005)
|+- .+.+.-+ |++.+ .+| -.+
T Consensus 175 gitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~~~~~~ 254 (397)
T PRK06954 175 GFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAANSSSI 254 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEccccCCC
Confidence 000 0111111 22100 012 224
Q ss_pred cCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
+||++++||.+.+.|.+.|.+++++|.|++...+.... ...+...+++++|+++|++|+||||+|.|...+.
T Consensus 255 ~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~Did~~ei~d~fa~--- 326 (397)
T PRK06954 255 SDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK-----FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAV--- 326 (397)
T ss_pred CCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccc-----ccchHHHHHHHHHHHcCCCHHHCCEEehhhHHHH---
Confidence 99999999999999999999999999998765332111 1124478999999999999999999999977664
Q ss_pred HHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 771 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 771 ~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
.|+..++.. +-. ..++.+..-+..+||+.+|+|+..++.++.+|+.
T Consensus 327 -~~l~~~e~l-g~~---~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~ 372 (397)
T PRK06954 327 -VTMAAMKEH-GLP---HEKVNVNGGACALGHPIGASGARILVTLIGALRA 372 (397)
T ss_pred -HHHHHHHHh-CCC---cccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence 455555443 211 1245566667778999999999999999999986
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-15 Score=174.85 Aligned_cols=271 Identities=17% Similarity=0.199 Sum_probs=184.4
Q ss_pred cCCHHHHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccc
Q psy612 546 RMDPRQRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMA 622 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~ 622 (1005)
.+++ ..|..++..+||+ |||+++++++ .|++|...... .....++..+++..|+.. |+++
T Consensus 24 ~~~~-~~L~~~~~~~al~~~agl~~~~Id----~vi~g~~~~~~------------~~g~~~ar~~~~~~Gl~~~~p~~~ 86 (387)
T PRK08947 24 NVRA-EDLSAHLMRSLLARNPALDPAEID----DIIWGCVQQTL------------EQGFNIARNAALLAGIPHSVPAVT 86 (387)
T ss_pred CCCH-HHHHHHHHHHHHHhccCcChHHhC----eEEEEeccccc------------cccccHHHHHHHHcCCCCCCccee
Confidence 3444 5677888999999 5899988877 68888532110 001123445788889874 7799
Q ss_pred ccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH------------------HHHH------HHHcCCC-----
Q psy612 623 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------------AYIA------MTSAGML----- 672 (1005)
Q Consensus 623 v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~------------------~~~~------~~~~~~l----- 672 (1005)
|+++|+||+.|+++|+++|++|++|++||||++.+.. |. ..+. ..+.|+-
T Consensus 87 V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~ 166 (387)
T PRK08947 87 VNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQD 166 (387)
T ss_pred eechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999999999985432 10 0000 0011110
Q ss_pred --------------------------------------CCCCCCc-------------CCCC------CCCCceecCccE
Q psy612 673 --------------------------------------SPDGKCY-------------VFDE------RANGLVPSEAVV 695 (1005)
Q Consensus 673 --------------------------------------s~~g~~~-------------pfd~------~a~G~~~gEGa~ 695 (1005)
+++...| -|+. ..|--.++||++
T Consensus 167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa 246 (387)
T PRK08947 167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS 246 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence 1121111 1121 122334689999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
++||.+.+.|.+.|++++++|+|++.+++-. ..+. .+...+++++|++||++|+||||+|.|...|. .|+.
T Consensus 247 Avvl~s~~~A~~~g~~p~~~I~g~~~~~~~~--~~~~---~~~~~a~~~al~~Agl~~~DId~~El~d~F~~----~~l~ 317 (387)
T PRK08947 247 AMLVMSESRAKELGLKPRARIRSMAVAGCDP--SIMG---YGPVPATQKALKRAGLSISDIDVFELNEAFAA----QSLP 317 (387)
T ss_pred EEEEccHHHHHHCCCCccEEEEEEEEcCcCc--cccc---ccHHHHHHHHHHHcCCCHHHCCEEEecccchH----HHHH
Confidence 9999999999999999999999999884311 1111 12367889999999999999999999987764 5555
Q ss_pred HHHHH-hccCCCCCCce-eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccc
Q psy612 776 ALHDV-FKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853 (1005)
Q Consensus 776 al~~~-~~~~~~~~~~~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w 853 (1005)
.++.. |.... . .++ +-|..++. ||+.+|+|+..++..+.+|+.
T Consensus 318 ~~e~lg~~~~~-~-~~vN~~GG~la~-GhP~GAtG~~~v~~l~~~L~~-------------------------------- 362 (387)
T PRK08947 318 CLKDLGLLDKM-D-EKVNLNGGAIAL-GHPLGCSGARISTTLLNLMER-------------------------------- 362 (387)
T ss_pred HHHHcCCCCCC-C-CCcCCCCchhhc-CCCccccHHHHHHHHHHHHHh--------------------------------
Confidence 55543 22210 0 122 23555544 999999999999999988875
Q ss_pred cccccCccEEEEcccCCCCceEEEEEec
Q psy612 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 854 ~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
...|++.+++.|-||.-+.+|||.
T Consensus 363 ----~~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 363 ----KDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred ----cCCCEEEEEEeecccceeEEEEEe
Confidence 013677788787677767777764
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=173.23 Aligned_cols=266 Identities=17% Similarity=0.218 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
.-|+.+++.+||+|||+++++++ .|++|+....+. ...++..++..+|+. =|+++|+++|+
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~-------------~~~~a~~va~~~Gl~~~~p~~~V~~~Ca 89 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID----DVIFGQGYPNGE-------------APAIGRVAALDAGLPVTVPGMQLDRRCG 89 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------CChHHHHHHHHcCCCCCCceeehhhhhh
Confidence 46778999999999999988887 788886543221 112345678888986 38999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-H----H-----------HHHHH------------H-HcCCC-------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P----E-----------AYIAM------------T-SAGML------- 672 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~----~-----------~~~~~------------~-~~~~l------- 672 (1005)
|++.|++.|+++|++|++|++||+|++.+.. + . .+..+ . ..+|.
T Consensus 90 Sg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~ 169 (404)
T PRK06205 90 SGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLR 169 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHHHHHHH
Confidence 9999999999999999999999999975321 0 0 00000 0 00010
Q ss_pred -----C----------------C---CCCC-------------------------------------c-CC---C-----
Q psy612 673 -----S----------------P---DGKC-------------------------------------Y-VF---D----- 682 (1005)
Q Consensus 673 -----s----------------~---~g~~-------------------------------------~-pf---d----- 682 (1005)
+ . .|.. + .| +
T Consensus 170 ~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~l 249 (404)
T PRK06205 170 REYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATV 249 (404)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCce
Confidence 0 0 0110 0 11 0
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
...|--.+++|++++||.+.+.|.+.|++++++|.|++...+.-.. ...+...++++||++||++|+||||+|.|
T Consensus 250 t~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~Did~~ei~ 324 (404)
T PRK06205 250 TAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR-----MGIGPVPATEKALARAGLTLDDIDLIELN 324 (404)
T ss_pred eCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-----ccccHHHHHHHHHHHcCCCHHHCCEeeec
Confidence 1111222479999999999999999999999999999977543211 11355788999999999999999999987
Q ss_pred CCCCCCCCHHHHHHHH--HHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 763 GTGTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~--~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
|+.+...|. +.|+-......++.+..-+..+||+.+|+|+..++.++.+|+.+
T Consensus 325 -------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------ 379 (404)
T PRK06205 325 -------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR------------------ 379 (404)
T ss_pred -------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc------------------
Confidence 444443332 23331110001244444555669999999999999999999863
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|+++++.-+-||.-..+|||.
T Consensus 380 ------------------~~~~gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 380 ------------------QARYGLETMCIGGGQGLAAVFER 402 (404)
T ss_pred ------------------CCCeEEEEEeccCChhhEEEEEe
Confidence 12567777777888888899885
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=174.10 Aligned_cols=245 Identities=18% Similarity=0.194 Sum_probs=167.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAIN 624 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~ 624 (1005)
.+| .-|+.++..+||+|+|+++++++ .|++|....+... . ..++..++...|+. -|.++|+
T Consensus 24 ~~~-~eL~~~a~~~al~~agi~~~~Id----~v~~G~~~~~~~~-----------~-~~~ar~~~~~~Glp~~~p~~tV~ 86 (401)
T PRK08131 24 VRP-DDLAATVIRRLLEKSGFPGDDIE----DVILGCTNQAGED-----------S-RNVARNALLLAGLPVTVPGQTVN 86 (401)
T ss_pred CCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc-----------c-ccHHHHHHHhcCCCCCCceeeee
Confidence 344 56788999999999999988887 7888865321110 0 11233477778886 5999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-------------H-HHH--------------HH--------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------------A-YIA--------------MT-------- 667 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-------------~-~~~--------------~~-------- 667 (1005)
.+|+||+.|++.|+++|++|++|++||||++.+.. |. . +.. +.
T Consensus 87 ~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~a 166 (401)
T PRK08131 87 RLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETG 166 (401)
T ss_pred chhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHHHH
Confidence 99999999999999999999999999999985432 11 0 000 00
Q ss_pred -----HcCCCC------------------CCCCC----cCCCCC------------------------------------
Q psy612 668 -----SAGMLS------------------PDGKC----YVFDER------------------------------------ 684 (1005)
Q Consensus 668 -----~~~~ls------------------~~g~~----~pfd~~------------------------------------ 684 (1005)
+.|+-. +.+.- .|.+.+
T Consensus 167 e~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~g~ 246 (401)
T PRK08131 167 DNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEGGV 246 (401)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCCCC
Confidence 000000 11100 022110
Q ss_pred ---CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 685 ---ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 685 ---a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
.|---+++|++++||.+.+.|.+.|+++++.|+|++...+... +...+-..+++++|+++|++|+|||++|.
T Consensus 247 lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~a~~~agl~~~did~~ei 321 (401)
T PRK08131 247 VTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR-----IMGIGPVEAIKKALARAGLTLDDMDIIEI 321 (401)
T ss_pred ccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCeehh
Confidence 0223358999999999999999999999999999998765321 11234578999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCC--cCchhhchhhHHHHHHHHHhhc
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~--iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
|...|. .|+..+ +.++-.. ...+|....+. +||+.+|+|+..++.++.+|+.
T Consensus 322 ~d~Fa~----~~l~~~-e~lg~~~---~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 322 NEAFAS----QVLGCL-KGLGVDF---DDPRVNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred ccHHHH----HHHHHH-HHcCCCC---CCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 866553 233322 2233110 11345444442 4999999999999999999986
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.7e-15 Score=170.79 Aligned_cols=250 Identities=16% Similarity=0.152 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|+.+++++||+|||+++++++ +|++|.....+.. ......++..+|+.+ |+++|+++|+|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~~-------------~~~~~~~a~~lGl~~~~~~~v~~~c~s 90 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIGS-------------GKSGTPLSRALRLPNIPVTRVENFCAT 90 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc-------------cchhHHHHHHcCCCCCCEEEEecccHH
Confidence 67889999999999999998887 7888864321100 011245777899987 88899999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH----------------------HHHH------HHHcCCC--------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS-PE----------------------AYIA------MTSAGML-------- 672 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~----------------------~~~~------~~~~~~l-------- 672 (1005)
++.||++|+++|++|+||++||+|++.+.. +. ..+. +.+.|+-
T Consensus 91 g~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~ 170 (398)
T PRK06157 91 GSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSREDLKRAM 170 (398)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHHHcccc
Confidence 999999999999999999999999985321 00 0000 0000100
Q ss_pred -------------CCCCC------------CcCC-C--CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccC
Q psy612 673 -------------SPDGK------------CYVF-D--ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 724 (1005)
Q Consensus 673 -------------s~~g~------------~~pf-d--~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~d 724 (1005)
.|+.. .++. + ..-|--.+++|++++||.+.+.|.+-++...++|+|++..++
T Consensus 171 a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~ 250 (398)
T PRK06157 171 AHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVS 250 (398)
T ss_pred cHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecc
Confidence 01100 0000 0 011222358999999999999998877645678999887654
Q ss_pred CCCCC---CCCCC-HHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hcc-----------CCC
Q psy612 725 GKTNG---ITAPN-GISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKN-----------KTY 786 (1005)
Q Consensus 725 G~~~~---~~~p~-~~~q~~~i~~al~~agi~--~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~-----------~~~ 786 (1005)
..... -..|. ......+.++||++|||+ ++|||++|.|...|. .|+..++.. |.. ...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl~~~Ge~~~~~~~g~~~ 326 (398)
T PRK06157 251 NGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGLSERGQAWRDVLDGFFD 326 (398)
T ss_pred cccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence 31110 01121 223456889999999998 799999999999885 455444433 221 111
Q ss_pred CCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 787 NQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 787 ~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
....+|| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 327 ~~G~~pvN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 327 ADGGLPCQIDGGLKCF-GHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred CCCCeeecCCCCcccC-CCcccHhHHHHHHHHHHHhccc
Confidence 1233555 555555 9999999999999999999875
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=174.29 Aligned_cols=263 Identities=19% Similarity=0.238 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
.-|..+++.+||+|||+++++++ .|++|+...... + ..++..++..+|+. =|+++|+++|+
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~~----------~---~~~~~~~~~~~Gl~~~~p~~~V~~~Ca 89 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE----EVIMGTVLQGGQ----------G---QIPSRQAARAAGIPWEVQTETVNKVCA 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC----------C---CCHHHHHHHHcCCCCCcceeehhhhhh
Confidence 45778999999999999988887 788886542100 0 12333567888984 49999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH------------HHH-------------------------HcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI------------AMT-------------------------SAG 670 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~------------~~~-------------------------~~~ 670 (1005)
|++.|++.|++.|++|++|.+||+|++.+.. |.... .+. +.|
T Consensus 90 Sg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yg 169 (393)
T PRK08235 90 SGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELG 169 (393)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999985432 20000 000 000
Q ss_pred C-------------------------------------------CCCCCCCc-------------CCCCCCCCce-----
Q psy612 671 M-------------------------------------------LSPDGKCY-------------VFDERANGLV----- 689 (1005)
Q Consensus 671 ~-------------------------------------------ls~~g~~~-------------pfd~~a~G~~----- 689 (1005)
+ ++|+...| .|+ .+|.+
T Consensus 170 itre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~--p~g~lt~~~~ 247 (393)
T PRK08235 170 ISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFD--KTGTITAGNA 247 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCccc--CCCcEecccc
Confidence 0 00111111 011 12222
Q ss_pred --ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy612 690 --PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 767 (1005)
Q Consensus 690 --~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~ 767 (1005)
++||++++||.+.+.|.+.|++++++|.|++...+.... .+ .....++++||++||++|+|||++|.|...+.
T Consensus 248 ~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~---~~--~~~~~a~~~al~~agl~~~did~~e~~d~f~~ 322 (393)
T PRK08235 248 PGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD---FP--RTPGYAINALLEKTGKTVEDIDLFEINEAFAA 322 (393)
T ss_pred CCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh---hc--chHHHHHHHHHHHhCCCHHHCCeehhcchhHH
Confidence 499999999999999999999999999998765432211 11 12357999999999999999999998744332
Q ss_pred CCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 768 LGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 768 ~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
.|+ +..+.|+-. ..++.+..-+..+||+.+|+|+..++.++.+|+.+
T Consensus 323 ----~~l-~~~e~lg~~---~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~------------------------- 369 (393)
T PRK08235 323 ----VAL-ASTEIAGID---PEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR------------------------- 369 (393)
T ss_pred ----HHH-HHHHHhCCC---cccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc-------------------------
Confidence 122 223444421 12455666677789999999999999999999862
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..++...+...-||.-..+|||.
T Consensus 370 -----------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 -----------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred -----------CCCeEEEEEcccccceEEEEEEe
Confidence 11345555566788888888874
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=169.49 Aligned_cols=250 Identities=15% Similarity=0.133 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCsS 629 (1005)
..|+.+++.+||+|||+++++++ +++++.. .+.. .+ ....+..++..+|+. .|++.|+++|+|
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID----~~i~~~~-~~~~---------~~--~~~~a~~l~~~lG~~~~~~~~V~~~gas 93 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID----CVVIGSA-PDAF---------DG--VHMKGEYLSHGSGGIRKPVSRVYVGGAT 93 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-CCcc---------cc--cccHHHHHHHHcCCCCCCeEEEecCchh
Confidence 57889999999999999988887 7777642 1111 00 123455688888887 599999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCH----HHHH--------------------H------HHHcCCCC------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISP----EAYI--------------------A------MTSAGMLS------ 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~----~~~~--------------------~------~~~~~~ls------ 673 (1005)
+..|+..|+++|++|+||.+||.|++.+... .... . +.+.|.-.
T Consensus 94 G~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~v 173 (392)
T PRK06065 94 GVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALV 173 (392)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 9999999999999999999999988763111 0000 0 00001000
Q ss_pred -----CCCCCcCCCCCC---------------------CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCC
Q psy612 674 -----PDGKCYVFDERA---------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 727 (1005)
Q Consensus 674 -----~~g~~~pfd~~a---------------------~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~ 727 (1005)
.++.-+|+..-+ |--.+++|++++||-+.+.|.+-+++. ..|+|++..++...
T Consensus 174 av~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~ 252 (392)
T PRK06065 174 SVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTE 252 (392)
T ss_pred HHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccc
Confidence 011112221111 111258999999999999998776554 34888887655422
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCCHHHHHHHHHH-----------hc-cCCCCCCcee
Q psy612 728 NGIT-APNGISQTELIKSVYKKSNLNP--EDINYIITHGTGTKLGDPVEINALHDV-----------FK-NKTYNQKFCA 792 (1005)
Q Consensus 728 ~~~~-~p~~~~q~~~i~~al~~agi~~--~~I~yve~hgtgt~~gD~~E~~al~~~-----------~~-~~~~~~~~~~ 792 (1005)
.... .....+...+.+++|++||+++ +|||++|.|...|. .|+-.+... +. ........+|
T Consensus 253 ~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p 328 (392)
T PRK06065 253 WPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP 328 (392)
T ss_pred cccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence 1111 1123445679999999999985 99999999999885 444444322 11 1112222345
Q ss_pred E---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 793 I---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 793 i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 329 vN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 329 SSPSGGLLGV-GNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred ecCCCccccC-CCCccHHHHHHHHHHHHHHhcc
Confidence 5 666666 9999999999999999999874
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-15 Score=172.27 Aligned_cols=250 Identities=14% Similarity=0.147 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|+.+++.+||+|||+++++++ +|++|.....+ .+ .+.....++..+|+.+ |+++|+.+|+|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~----------~g--~~~~~~~~~~~lGl~~~~~~~v~~~~aS 101 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID----GSVASYFSDHF----------QR--QLLAGIMVQDYLGLVPKPSKRIEGGGAT 101 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEecccccc----------cc--cchhhHHHHHhcCCCCCceEEEeCCcHH
Confidence 47889999999999999988876 56665321110 01 1222334678899987 99999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH-HHH----------HcCCC------------------C------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI-AMT----------SAGML------------------S------ 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~-~~~----------~~~~l------------------s------ 673 (1005)
++.||+.|++.|++|+||++||+|++.... +.... .+. ..+.. +
T Consensus 102 g~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~ 181 (430)
T PRK06365 102 GGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAK 181 (430)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999995432 10000 000 00110 0
Q ss_pred ------CCCCCcCCCCCC---------------------CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCC
Q psy612 674 ------PDGKCYVFDERA---------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK 726 (1005)
Q Consensus 674 ------~~g~~~pfd~~a---------------------~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~ 726 (1005)
......||.... |--.+++|++++||.+.+.|.+-+++. ..|+|.+..+++.
T Consensus 182 vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~ 260 (430)
T PRK06365 182 VSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTL 260 (430)
T ss_pred HHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEecccc
Confidence 001112222111 111147999999999999998766554 3356665555442
Q ss_pred CCCC--------------------C---CCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-
Q psy612 727 TNGI--------------------T---APNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV- 780 (1005)
Q Consensus 727 ~~~~--------------------~---~p~~~~q~~~i~~al~~agi~--~~~I~yve~hgtgt~~gD~~E~~al~~~- 780 (1005)
.... . .........+++++|++||++ ++|||++|.|...|. .|+..+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~----~~l~~lE~lG 336 (430)
T PRK06365 261 RLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTS----SEIQTYEDLG 336 (430)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcH----HHHHHHHHcC
Confidence 2100 0 112334468999999999997 799999999999875 455444333
Q ss_pred hcc-----------CCCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 781 FKN-----------KTYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 781 ~~~-----------~~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
|.. .......+|| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 337 l~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~-Ghp~GatG~~~~~e~~~QLrG~ 391 (430)
T PRK06365 337 LCKYGEGGQFIESGKPELPGKLPVNPSGGLLAA-GHAVGATGIMQAVFMFWQLQGR 391 (430)
T ss_pred CCCCCchHHHHHCCCcCCCCCccccCCCchhcC-CCcccHHHHHHHHHHHHHHhcc
Confidence 111 1111223455 555554 9999999999999999999985
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.3e-15 Score=170.42 Aligned_cols=281 Identities=16% Similarity=0.181 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|+.+++.+||+|||+++++++ .+++|....... .....+..++..+|+++ |.++|+++|+|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~~------------~~~~~a~~va~~lG~~~~~~~~v~~~Cas 87 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNGY------------PGFVAGATFAQALGWNGAPVSSSYAACAS 87 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCcc------------CCccHHHHHHHHhCCCCCceecccchhHH
Confidence 67789999999999999887665 555554322110 01123567889999998 89999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC----HHHH-----HHHHH---cCCC------------------C------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS----PEAY-----IAMTS---AGML------------------S------ 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~----~~~~-----~~~~~---~~~l------------------s------ 673 (1005)
++.||++|+++|++|++|.+||+|++.+.. +... ..+.. .++. +
T Consensus 88 g~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~ 167 (399)
T PRK06059 88 GSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQ 167 (399)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999886432 1000 00000 1110 0
Q ss_pred ------CCCCCcCCCCC---------------------CCCceecCccEEEEEcccchhhcC--CCceEEEEEEeeeccC
Q psy612 674 ------PDGKCYVFDER---------------------ANGLVPSEAVVAVVLKRLSRALSD--GDPIHAIIRGSGINYD 724 (1005)
Q Consensus 674 ------~~g~~~pfd~~---------------------a~G~~~gEGa~~vvLk~l~~A~~~--g~~I~avI~g~~~~~d 724 (1005)
..+.-.|...- -|--.+++|++++||.+.+.|.+- |.+..++|+|++...+
T Consensus 168 v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~ 247 (399)
T PRK06059 168 VKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTP 247 (399)
T ss_pred HHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecc
Confidence 00111111111 122224899999999999988876 5445678888876543
Q ss_pred CCC------CCCC--------CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hcc------
Q psy612 725 GKT------NGIT--------APNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKN------ 783 (1005)
Q Consensus 725 G~~------~~~~--------~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~------ 783 (1005)
... ..+. +|+....+.+.+++|++||++|+|||++|.|...|. .|+..++.. |..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~~~e~lGl~~~G~~~~ 323 (399)
T PRK06059 248 RYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELDWYEHLGLCPKGEAEA 323 (399)
T ss_pred cccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHHHHHHcCCCCCCcHHH
Confidence 221 1121 112223457899999999999999999999999775 455444332 111
Q ss_pred -----CCCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccc
Q psy612 784 -----KTYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 855 (1005)
Q Consensus 784 -----~~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~ 855 (1005)
.......+|| |..++. ||+.+|+|+..++.++++|+..--..+ .
T Consensus 324 ~~~~G~~~~~G~~pvN~~GG~la~-Ghp~gatG~~~~~e~~~qLrg~ag~~Q---------------------------v 375 (399)
T PRK06059 324 LLRSGATTLGGRIPVNPSGGLACF-GEAIPAQAIAQVCELTWQLRGQAGGRQ---------------------------V 375 (399)
T ss_pred HHHCCCccCCCCeeecCCCccccC-CccCCccHHHHHHHHHHHhccCcCCcc---------------------------C
Confidence 1112223455 666665 999999999999999999987421110 0
Q ss_pred cccCccEEEEcccCCCCceEEEEEec
Q psy612 856 VNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 856 ~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
...+++.+.+.|.+|..+.+|||.
T Consensus 376 --~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 376 --EGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred --CCccEEEEeccCCcccceEEEecC
Confidence 124677788888888988898873
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.5e-15 Score=170.73 Aligned_cols=249 Identities=18% Similarity=0.173 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCC--CCCCceEEEEeeccCCccccccccccccccchhHHHHHHH-------HHhCCCC-Cc
Q psy612 551 QRHLLQESWLALEDAGYGPNQ--IANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLA-------YFMDLKG-PV 620 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~--~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris-------~~~~l~G-ps 620 (1005)
..|..+++.+||+|||+++++ ++ +|++|........ + ...++..++ ..+++.+ |+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~~~---------~--~~~~a~~~~~~~gl~~~~~gl~~~p~ 113 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGELFS---------S--QGHLGPAAVGSLGQSGASNALLYKPA 113 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEeccccccc---------c--ccchHHHHHHhccCcccccccCCCce
Confidence 467899999999999999887 77 7888865322110 0 011222233 4456654 99
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC---------------------------HHHHH----HHHHc
Q psy612 621 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS---------------------------PEAYI----AMTSA 669 (1005)
Q Consensus 621 ~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~---------------------------~~~~~----~~~~~ 669 (1005)
++|+++|+|++.|++.|+++|++|++|++||+|++.+.. |..+. .+.+.
T Consensus 114 ~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ym~~~ 193 (438)
T PTZ00455 114 MRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRMKYIQEH 193 (438)
T ss_pred eEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999885322 10010 01122
Q ss_pred CCCC------------CCCCCcCCCC--------------------------------CCCCceecCccEEEEEcccchh
Q psy612 670 GMLS------------PDGKCYVFDE--------------------------------RANGLVPSEAVVAVVLKRLSRA 705 (1005)
Q Consensus 670 ~~ls------------~~g~~~pfd~--------------------------------~a~G~~~gEGa~~vvLk~l~~A 705 (1005)
+-++ .++.-+|+.. -.|--.+++|++++||.+.+.|
T Consensus 194 ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl~See~A 273 (438)
T PTZ00455 194 GHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVLASEEGL 273 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEEecHHHH
Confidence 2122 1122222211 1111124799999999999999
Q ss_pred hcCCCce----EEEEEEeeeccCCCCC---CCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH
Q psy612 706 LSDGDPI----HAIIRGSGINYDGKTN---GITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH 778 (1005)
Q Consensus 706 ~~~g~~I----~avI~g~~~~~dG~~~---~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~ 778 (1005)
.+-+.+. .+.|+|++...+.... .++. -... ..+++++|++||++|+|||++|.|...|. .|+..++
T Consensus 274 ~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~-~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~----~~l~~~e 347 (438)
T PTZ00455 274 QKMGLSPNDSRLVEIKSLACASGNLYEDPPDATR-MFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTI----AELLMYE 347 (438)
T ss_pred HhcCCCCCCCccEEEEEEEEecCCcccCcccccc-chHH-HHHHHHHHHHcCCCHHHCcEeeecccChH----HHHHHHH
Confidence 8878765 6889999887653211 0111 1223 67899999999999999999999998875 4555444
Q ss_pred HH-hccC-----------CCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 779 DV-FKNK-----------TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 779 ~~-~~~~-----------~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
.. |... ......++| |..++. ||+.+|+|+..++.++.+|+.
T Consensus 348 ~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~-GHP~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 348 ALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSF-GHPVGATGVKQIMEVYRQMKG 404 (438)
T ss_pred HcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhc-CCCcchHHHHHHHHHHHHHhh
Confidence 43 1111 111122344 666665 999999999999999999986
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=171.23 Aligned_cols=265 Identities=18% Similarity=0.178 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
..|..+++.+||+|||+++++++ +|++|....... . ...++..+....++ ..|.++|+++|+
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~~~~-----------~-~~~~~~~~~l~~gl~~~~p~~~v~~aca 90 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDTIGP-----------Q-AGNIARTSWLAAGLPEEVPGVTVDRQCG 90 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEeeccCCc-----------c-cccHHHHHHHHcCCCCCCceeeecchhh
Confidence 45889999999999999998887 788874311000 0 00012222223444 569999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH--H--H----------H---HH-HHcCCC--C--------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE--A--Y----------I---AM-TSAGML--S-------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~--~--~----------~---~~-~~~~~l--s-------------- 673 (1005)
|++.|++.|+++|++|+||++||+|++.+.. |. . . . .+ ...+.. +
T Consensus 91 Sg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~ 170 (382)
T PRK07801 91 SSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGI 170 (382)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999984322 21 0 0 0 00 011110 0
Q ss_pred -------------------C-CCCCc----CCC----------------------------CCCCCceecCccEEEEEcc
Q psy612 674 -------------------P-DGKCY----VFD----------------------------ERANGLVPSEAVVAVVLKR 701 (1005)
Q Consensus 674 -------------------~-~g~~~----pfd----------------------------~~a~G~~~gEGa~~vvLk~ 701 (1005)
| .|..+ |++ ...|--.++||++++||.+
T Consensus 171 tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s 250 (382)
T PRK07801 171 SREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLAS 250 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEec
Confidence 0 11110 111 0112223479999999999
Q ss_pred cchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy612 702 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 781 (1005)
Q Consensus 702 l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~ 781 (1005)
.+.|.+.+.+.+++|.|++...+......+.| ..++++||++||++|+||||+|.|...+. .|+..++..
T Consensus 251 ~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~a~~~a~~~agi~~~did~~e~~d~Fa~----~~~~~~e~l- 320 (382)
T PRK07801 251 ERAVKRHGLTPRARIHHLSVRGDDPVFMLTAP-----IPATRYALEKTGLSIDDIDVVEINEAFAP----VVLAWLKET- 320 (382)
T ss_pred HHHHHHCCCCccEEEEEEEEecCChHhhccCh-----HHHHHHHHHHcCCCHHHcCEeeecccchH----HHHHHHHHh-
Confidence 99999888888899999876543211111222 46899999999999999999999988774 555555543
Q ss_pred ccCCCCCCceeE-eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCc
Q psy612 782 KNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKL 860 (1005)
Q Consensus 782 ~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~ 860 (1005)
+-.. .|+-. |..++ +||+.+|+|+..++.++.+|+.+ ..
T Consensus 321 G~~~---~pvN~~GG~l~-~Ghp~gasG~~~~~e~~~qL~~~------------------------------------~~ 360 (382)
T PRK07801 321 GADP---AKVNPNGGAIA-LGHPLGATGAKLMTTLLHELERT------------------------------------GG 360 (382)
T ss_pred CCCc---hhcCCCcchhh-hcCcHHHHHHHHHHHHHHHHHhc------------------------------------CC
Confidence 2111 12222 44444 49999999999999999999871 12
Q ss_pred cEEEEcccCCCCceEEEEEec
Q psy612 861 RIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 861 r~a~v~sfG~gG~nah~il~~ 881 (1005)
|++..++.|.||+...+|||.
T Consensus 361 ~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 361 RYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred CEEEEEEcccccceeEEEEEe
Confidence 466777788788888888873
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-14 Score=167.47 Aligned_cols=266 Identities=15% Similarity=0.168 Sum_probs=182.5
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccc
Q psy612 546 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAI 623 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v 623 (1005)
.++| .-|..+++.++|+|+|+++++++ .|++|...... .....++-.++...|+. =|+++|
T Consensus 23 ~~~~-~eL~~~a~~~aL~~agi~~~~Id----~v~~G~~~~~~------------~q~~~~ar~~~l~~Gl~~~~p~~tV 85 (387)
T PRK07850 23 GLHA-AELLGAVQRAVLDRAGIDPGDVE----QVIGGCVTQAG------------EQSNNITRTAWLHAGLPYHVGATTI 85 (387)
T ss_pred CCCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc------------cccchHHHHHHHhCCCCCCCceEEE
Confidence 3444 56778999999999999988877 68888543110 00012333445567886 389999
Q ss_pred cccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH-------------HH-------------HHcCCCC---
Q psy612 624 NTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI-------------AM-------------TSAGMLS--- 673 (1005)
Q Consensus 624 ~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~-------------~~-------------~~~~~ls--- 673 (1005)
+++|+||+.|++.|++.|++|++|++||||++.+.. |.... .+ .+.|+--
T Consensus 86 ~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~ 165 (387)
T PRK07850 86 DCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDV 165 (387)
T ss_pred ecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHH
Confidence 999999999999999999999999999999996532 21000 00 0000000
Q ss_pred ---------------CC----------------------CC---------------------CcCCCCCCCCc-------
Q psy612 674 ---------------PD----------------------GK---------------------CYVFDERANGL------- 688 (1005)
Q Consensus 674 ---------------~~----------------------g~---------------------~~pfd~~a~G~------- 688 (1005)
.+ +. ...| .+|.
T Consensus 166 d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~---~~~~~t~~~~~ 242 (387)
T PRK07850 166 DAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL---EGGIHTAGTSS 242 (387)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCC---CCCCccchhcC
Confidence 00 10 1123 2344
Q ss_pred eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.+++|++++||.+.+.|.+.|.+..+.|+|++...+-.. .. ..+...+++++|++||++|+|||++|.|...+.
T Consensus 243 ~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~--~~---~~~~~~a~~~al~~agl~~~did~~ei~d~F~~- 316 (387)
T PRK07850 243 QISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPY--YH---LDGPVQATAKVLEKAGMKIGDIDLVEINEAFAS- 316 (387)
T ss_pred CcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCch--hh---cchHHHHHHHHHHHcCCCHHHcCeeeecccchH-
Confidence 357999999999999999989888899999886432111 11 234478999999999999999999999987764
Q ss_pred CCHHHHHHHHHHhccCCCCCCcee-EeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 769 GDPVEINALHDVFKNKTYNQKFCA-ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 769 gD~~E~~al~~~~~~~~~~~~~~~-igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
.|+..+ +.|+-.. . ++- -|..++. ||+.+|+|+..++.++.+|+.+
T Consensus 317 ---~~l~~~-e~lg~~~--~-pvN~~GG~la~-Ghp~gatG~~~v~e~~~qL~~~------------------------- 363 (387)
T PRK07850 317 ---VVLSWA-QVHEPDM--D-KVNVNGGAIAL-GHPVGSTGARLITTALHELERT------------------------- 363 (387)
T ss_pred ---HHHHHH-HHcCCCC--C-CcCCCCchhhc-CCCcchhHHHHHHHHHHHHHhc-------------------------
Confidence 444443 3444221 1 222 3555544 9999999999999999999762
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++.-+-||.-..+|||.
T Consensus 364 -----------~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 364 -----------DKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred -----------CCCeEEEEEccccCceeEEEEEe
Confidence 12456666667778888888884
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=6e-15 Score=171.92 Aligned_cols=268 Identities=17% Similarity=0.202 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taCs 628 (1005)
..|+.++..+||+|||+++++++ .|++|..... +. ...++..++...|+. -|+++|+.+|+
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~------------~~-~~~~ar~~a~~aGl~~~~P~~tV~~aCa 92 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQM------------PE-APNIAREIVLGTGMNVHTDAYSVSRACA 92 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCC------------CC-ccHHHHHHHHHCCCCCCCcceeehhhhH
Confidence 56778999999999999988876 7888864320 00 122455688999996 49999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH--H-----H-----------H--------HHH-----cCC-----
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA--Y-----I-----------A--------MTS-----AGM----- 671 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~--~-----~-----------~--------~~~-----~~~----- 671 (1005)
||+.|++.|++.|++|++|++||||++.+.. |.. . . . +.. .++
T Consensus 93 SG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (428)
T PRK08963 93 TSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYST 172 (428)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCcccccccC
Confidence 9999999999999999999999999985532 100 0 0 0 000 000
Q ss_pred ----------------CC-------------------CCCCC---------cCCC------------CC-----------
Q psy612 672 ----------------LS-------------------PDGKC---------YVFD------------ER----------- 684 (1005)
Q Consensus 672 ----------------ls-------------------~~g~~---------~pfd------------~~----------- 684 (1005)
++ .+|.- .|+. ..
T Consensus 173 ~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~~~~~v~ 252 (428)
T PRK08963 173 GLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYAKLRPAF 252 (428)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHhcCCccc
Confidence 00 00100 0111 00
Q ss_pred --CCCce-------ecCccEEEEEcccchhhcCCCceEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy612 685 --ANGLV-------PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 685 --a~G~~-------~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~ 754 (1005)
.+|.+ +++|++++||.+.+.|.+.|+++.+.|+|++... +.... ...+-..+++++|+++|++++
T Consensus 253 ~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~-----~~~~~~~a~~~al~~AGl~~~ 327 (428)
T PRK08963 253 DRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQD-----MLLGPAYATPLALERAGLTLA 327 (428)
T ss_pred cCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhh-----hhhHHHHHHHHHHHHcCCCHH
Confidence 11222 3899999999999999999999999999988654 11111 122335789999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----h-cc---CCCCCCce---eE---eccCCCcCchhhchhhHHHHHHHHHhh
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDV----F-KN---KTYNQKFC---AI---TSNKSNIGHTFAASGLVSLINLVQSIK 820 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~----~-~~---~~~~~~~~---~i---gsvK~~iGH~~~AaG~~~lik~~l~l~ 820 (1005)
|||++|.|...+. .|+..+... | .. .......+ +| |..++. ||+.+|+|+..++.++.+|+
T Consensus 328 DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~-GhP~gasG~~~~~e~~~qLr 402 (428)
T PRK08963 328 DLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAY-GHPFAATGARMITQTLHELR 402 (428)
T ss_pred HCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhc-CCCccccHHHHHHHHHHHHh
Confidence 9999999999874 444444333 1 11 00000111 23 555554 99999999999999999998
Q ss_pred cCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 821 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 821 ~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.+ ..++++++.-+-||....+|||.
T Consensus 403 g~------------------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 403 RR------------------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred hc------------------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 62 11356777777888888888874
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-15 Score=169.52 Aligned_cols=245 Identities=19% Similarity=0.164 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|+.|++++||+|||+.+.+++ +++++ +.. .+. ....++..+|+++ |...++++|+|
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~---~~~----------~~~----~~~~~~~~lGl~~~~~~~v~~gg~s 84 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD----GYFCA---GDA----------PGL----GPASMVDYLGLKLRHVDSTETGGSS 84 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEc---CCC----------CCc----cHHHHHHhCCCCCeeeccccCCcHH
Confidence 57889999999999999888877 44431 100 000 1134888999976 88899999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCH---HH---HH-------HHH-HcCCCC----------------------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISP---EA---YI-------AMT-SAGMLS---------------------- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~---~~---~~-------~~~-~~~~ls---------------------- 673 (1005)
+..++..|+++|++|+||.+||.|++...+. .. .. .+. ..|+..
T Consensus 85 ~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~l 164 (388)
T PRK08142 85 YLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQL 164 (388)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHH
Confidence 9999999999999999999999887753211 00 00 000 011111
Q ss_pred --------CCCCCcCCCCC---------------------CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccC
Q psy612 674 --------PDGKCYVFDER---------------------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 724 (1005)
Q Consensus 674 --------~~g~~~pfd~~---------------------a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~d 724 (1005)
.++.-+|+..- -|-..+++|++++||.+.+.|.+-+ +..+.|+|++..++
T Consensus 165 a~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~~~~~~ 243 (388)
T PRK08142 165 AWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK-RPLVKVLGAGEAIK 243 (388)
T ss_pred HHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC-CCCEEEEEEEEecC
Confidence 01111221111 1223358999999999999998765 44578999998877
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC-----------CCC-CCce
Q psy612 725 GKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYN-QKFC 791 (1005)
Q Consensus 725 G~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~-----------~~~-~~~~ 791 (1005)
................++++||++||++|+|||++|.|.+.|. .|+-.+... |... ... ...+
T Consensus 244 ~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 244 GQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred CccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 5332111112334467999999999999999999999999886 455554433 2111 111 1447
Q ss_pred eE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 792 AI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 792 ~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
|| |..|++ ||+.+|+|+..++.++.+|+..
T Consensus 320 PvN~sGG~l~~-G~p~gatG~~~~~E~~~QLrG~ 352 (388)
T PRK08142 320 PFNTDGGGLCN-NHPANRGGMTKVIEAVRQLRGE 352 (388)
T ss_pred cccCCChhhcC-CCcCcccHHHHHHHHHHHHcCC
Confidence 78 888888 9999999999999999999874
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-15 Score=169.79 Aligned_cols=250 Identities=15% Similarity=0.128 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
.-|+.+++..||+|||+++++++ ++++++. .++.. +. ...+..++..+|+++ |++.|+++|+|
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~~---------~~--~~~~~~va~~LGl~~~~~~~v~~~cas 88 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFFE---------GV--MMPELFLADALGATGKPLIRVHTAGSV 88 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-ccccc---------cc--cCchHHHHHhcCCCCCceEEEeccCHH
Confidence 46889999999999999988887 6777652 22111 00 112357889999986 88999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCH---------------------HHHH-----HHHHcCCCC----------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISP---------------------EAYI-----AMTSAGMLS---------- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~---------------------~~~~-----~~~~~~~ls---------- 673 (1005)
+..+++.|++.|++|+||.+||.|++..... ..+. .+.+.|...
T Consensus 89 g~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~ 168 (386)
T PRK08313 89 GGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKD 168 (386)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 9999999999999999999999998753221 0000 011222221
Q ss_pred -CCCCCcCCCCCC----------------------CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCC-
Q psy612 674 -PDGKCYVFDERA----------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG- 729 (1005)
Q Consensus 674 -~~g~~~pfd~~a----------------------~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~- 729 (1005)
..+.-+|+..-+ |-..+++|++++||-+.+.|.+-+.+..++|+|++..+|.....
T Consensus 169 ~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~ 248 (386)
T PRK08313 169 RLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAG 248 (386)
T ss_pred HHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCccccc
Confidence 012223322221 22225899999999999999877777778999998876643211
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hcc-----------CCCCCCceeE--
Q psy612 730 ITAPNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKN-----------KTYNQKFCAI-- 793 (1005)
Q Consensus 730 ~~~p~~~~q~~~i~~al~~agi~--~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~-----------~~~~~~~~~i-- 793 (1005)
.......+...+.++||++||++ ++|||++|.|.+.|. .|+-.+... |.. .......+||
T Consensus 249 ~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~ 324 (386)
T PRK08313 249 RDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNP 324 (386)
T ss_pred ccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccC
Confidence 11122356678999999999997 699999999999885 444444333 111 1222334566
Q ss_pred -eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 794 -TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 794 -gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
|..|+ ||..+|+|+..++.++.+|+..
T Consensus 325 ~GG~l~--g~p~gatG~~~~~e~~~qlrG~ 352 (386)
T PRK08313 325 SGGVLS--SNPIGASGMIRFAEAALQVMGK 352 (386)
T ss_pred CCcccc--cCCCcHHHHHHHHHHHHHhccc
Confidence 66777 9999999999999999999884
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.3e-16 Score=156.03 Aligned_cols=190 Identities=12% Similarity=0.083 Sum_probs=146.2
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+..++++||||+++|||..++..+.+++-..+........ .+......+.|....+...|++....+.++++..+.++|
T Consensus 3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~-a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLL-AELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccc-ccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 3467899999999999988887777765433322221111 111111122344455667888999999999999999999
Q ss_pred CccEEEEcCcccCccchhc--cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGLTSNIL--EANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~--~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~-~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
..|+||||||...+...+. ..+.++|++.++.|+++.+.|.+.++|.+++ . ..+.+|++||.+++.+..+++.|
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~---~p~~~~vVnvSS~aav~p~~~wa~y 158 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKK---SPVNGNVVNVSSLAAVRPFSSWAAY 158 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcC---CCccCeEEEecchhhhccccHHHHh
Confidence 9999999999988433344 6789999999999999999999999988543 3 25789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
|++|++.+.|.+.++.+- ...++++++.+|.. ++-|.
T Consensus 159 c~~KaAr~m~f~~lA~EE---p~~v~vl~~aPGvv-DT~mq 195 (253)
T KOG1204|consen 159 CSSKAARNMYFMVLASEE---PFDVRVLNYAPGVV-DTQMQ 195 (253)
T ss_pred hhhHHHHHHHHHHHhhcC---ccceeEEEccCCcc-cchhH
Confidence 999999999999998872 14778999998887 44453
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=168.13 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
..|+.+++.+||+|||+++++++ +|++|....... + . .++..++..+|+.. |.++|+++|+
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~~----------~--~-~~a~~~~~~~Gl~~~~p~~~v~~~ca 89 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAGV----------G--Q-NPAGQAAYHAGLPFGVTKYTVNVVCA 89 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCc----------c--C-cHHHHHHHHCCCCCCCcceeeechhh
Confidence 56889999999999999998887 788885432110 0 1 12455788899975 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-H-----H---H--HH-----HHHH----cCCC----------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P-----E---A--YI-----AMTS----AGML---------------- 672 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~-----~---~--~~-----~~~~----~~~l---------------- 672 (1005)
|++.|+.+|+++|++|+||++||+|++.+.. | . . +. .+.. .++.
T Consensus 90 Sg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~ 169 (388)
T PRK06366 90 SGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTA 169 (388)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHH
Confidence 9999999999999999999999999875331 1 0 0 00 0000 1110
Q ss_pred -----C------------------CC-CCCc----CC------------C----------CCCCCce-------ecCccE
Q psy612 673 -----S------------------PD-GKCY----VF------------D----------ERANGLV-------PSEAVV 695 (1005)
Q Consensus 673 -----s------------------~~-g~~~----pf------------d----------~~a~G~~-------~gEGa~ 695 (1005)
+ |+ |+.+ || + .+.+|.+ +++|++
T Consensus 170 ~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~sDGAa 249 (388)
T PRK06366 170 RKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGS 249 (388)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCccccee
Confidence 0 12 2221 11 0 0122333 489999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
++||.+.+.|.+-+.+..+.|+|++........-.. ....+++++|++||++|+|||++|.|...|. .|+-
T Consensus 250 Avvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~-----~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~----~~l~ 320 (388)
T PRK06366 250 ALVMASEKAINEYGLKPIARITGYESASLDPLDFVE-----APIPATRKLLEKQNKSIDYYDLVEHNEAFSI----ASII 320 (388)
T ss_pred EEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcc-----cHHHHHHHHHHHcCCCHHHcceeeccchhHH----HHHH
Confidence 999999999998888888899999887542211111 1257999999999999999999999988875 5665
Q ss_pred HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 776 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 776 al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
.++.. +-...+- -+-|..++. ||+.+|+|+..++..+.+|+.
T Consensus 321 ~le~l-gl~g~~v--N~~GG~la~-GHP~GatG~~~~~~l~~qL~~ 362 (388)
T PRK06366 321 VRDQL-KIDNERF--NVNGGAVAI-GHPIGNSGSRIIVTLINALKT 362 (388)
T ss_pred HHHHh-CCCCCcc--CCCCchhhh-CCCcCCCHHHHHHHHHHHHHh
Confidence 55544 2111111 134667766 999999999999999999976
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=166.19 Aligned_cols=253 Identities=21% Similarity=0.184 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|..+++.+||+|||+++++++ +|++|...+++... .... ... +. ....++.| |+++|+++|+|
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~~---~~~~----~~~-~~--~~~~~~~g~~~~~v~~~Cas 92 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFAG---QGHL----GAM-PA--TVHPALWGVPASRHEAACAS 92 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc---cccc----chH-HH--HHhhcCCCCceeecccccHH
Confidence 67889999999999999998887 78888654332110 0000 011 11 12334444 89999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH--H--H----HHH-----------------------HcCCCC----
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEA--Y--I----AMT-----------------------SAGMLS---- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~--~--~----~~~-----------------------~~~~ls---- 673 (1005)
++.||+.|+.+|++|+||.+||+|++.+.. |.. . . .+. +.|+-.
T Consensus 93 g~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la 172 (403)
T PRK06289 93 GSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLR 172 (403)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999875322 100 0 0 000 000000
Q ss_pred -------CCCCCcCCCCCC--------------------------CCceecCccEEEEEcccchhhcCCC-ceEEEEEEe
Q psy612 674 -------PDGKCYVFDERA--------------------------NGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGS 719 (1005)
Q Consensus 674 -------~~g~~~pfd~~a--------------------------~G~~~gEGa~~vvLk~l~~A~~~g~-~I~avI~g~ 719 (1005)
..+.-+|....+ |--.+++|++++||-+.+.|.+-++ +..++|+|+
T Consensus 173 ~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~ 252 (403)
T PRK06289 173 AIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGW 252 (403)
T ss_pred HHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEE
Confidence 011111111110 1112479999999999999987665 566889999
Q ss_pred eeccCCCCCC------CCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC-------
Q psy612 720 GINYDGKTNG------ITAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK------- 784 (1005)
Q Consensus 720 ~~~~dG~~~~------~~~p-~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~------- 784 (1005)
+..++-.... ...| .......+.++||++||++|+|||++|.|...|. .|+-.++.. |...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 253 GHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred EEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHHHHHcCCCCCCcHHHHH
Confidence 8775532111 0011 1233457899999999999999999999999886 455444433 2221
Q ss_pred ----CCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 785 ----TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 785 ----~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
......+|| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 329 ~~G~~~~~G~lpvN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 372 (403)
T PRK06289 329 ENGEIAIGGRLPINPSGGLIGG-GHPVGASGVRMLLDAAKQVTGT 372 (403)
T ss_pred hcCCcccCCCeeEcCCCCcccc-CCCccchHHHHHHHHHHHHhcc
Confidence 111333555 555655 9999999999999999999974
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.1e-14 Score=161.11 Aligned_cols=269 Identities=19% Similarity=0.172 Sum_probs=175.5
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHH--HHHHhCCCCCcccc
Q psy612 546 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSAR--LAYFMDLKGPVMAI 623 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~r--is~~~~l~Gps~~v 623 (1005)
.++| ..|..++..+||+|+|+++++++ .|++|.......+ + . .++-. +..-++..=|.++|
T Consensus 23 ~~~~-~~L~~~a~~~al~~a~l~~~~Id----~vi~G~~~~~~~~---------~--~-~~ar~~~l~~gl~~~vP~~tV 85 (390)
T PRK06504 23 GWHP-ADLAAQVLDALVDRSGADPALIE----DVIMGCVSQVGEQ---------A--T-NVARNAVLASKLPESVPGTSI 85 (390)
T ss_pred CCCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc---------c--c-cHHHHHHHHcCCCCCCceEEE
Confidence 4555 67889999999999999988887 6888854311000 0 0 11211 22223334599999
Q ss_pred cccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHH-H--------------HHHH-cC--C-------------
Q psy612 624 NTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY-I--------------AMTS-AG--M------------- 671 (1005)
Q Consensus 624 ~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~-~--------------~~~~-~~--~------------- 671 (1005)
+.+|+||+.|+..|++.|++|++|++||||++.+.. |... . .+.. .. .
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~ 165 (390)
T PRK06504 86 DRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKK 165 (390)
T ss_pred echhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999986532 2100 0 0000 00 0
Q ss_pred --CC-------------------CCC-------------------------------------CCcCCCCC-----CCCc
Q psy612 672 --LS-------------------PDG-------------------------------------KCYVFDER-----ANGL 688 (1005)
Q Consensus 672 --ls-------------------~~g-------------------------------------~~~pfd~~-----a~G~ 688 (1005)
++ ..| +.+|.... .|--
T Consensus 166 ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s 245 (390)
T PRK06504 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATAS 245 (390)
T ss_pred hCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCC
Confidence 00 011 01111100 1222
Q ss_pred eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.+++|++++||.+.+.|.+-+++..+.|++++...+-.. .. ..+-..+++++|+++|++|+|||++|.|...|.
T Consensus 246 ~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~---~~--~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~- 319 (390)
T PRK06504 246 QICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV---IM--LEAPLPATERALKKAGMKIDDIDLYEVNEAFAS- 319 (390)
T ss_pred CCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCch---hh--hccHHHHHHHHHHHcCCCHHHCCEEEecccchH-
Confidence 357999999999999998888776677887765433211 11 123346899999999999999999999998875
Q ss_pred CCHHHHHHHHHHhccCCCCCCce-eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 769 GDPVEINALHDVFKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 769 gD~~E~~al~~~~~~~~~~~~~~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
.|+..++.. +-.. .++ +-|..++. ||+.+|+|+..+...+.+|+..
T Consensus 320 ---~~l~~~e~l-G~~~---~pvN~~GG~la~-Ghp~gatG~r~~~~l~~~lr~~------------------------- 366 (390)
T PRK06504 320 ---VPLAWLKAT-GADP---ERLNVNGGAIAL-GHPLGASGTKLMTTLVHALKQR------------------------- 366 (390)
T ss_pred ---HHHHHHHHh-CCCC---CCcCCCCcHHhc-CCCcchhHHHHHHHHHHHHHhh-------------------------
Confidence 455444443 2111 112 23555554 9999999988888888888751
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++..|.||....+|||.
T Consensus 367 -----------~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 -----------GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred -----------CCCeEEEEEeecccceeEEEEEe
Confidence 12456667676688888888874
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.4e-14 Score=143.37 Aligned_cols=186 Identities=12% Similarity=0.083 Sum_probs=155.1
Q ss_pred ccCCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 65 IKQGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 65 ~~~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+-++|++||+|= .+.|+..||+.|.++|+. ++++...+..++..++|.+.-....+++|||++.+++.++++++.++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 347999999994 589999999999999985 55555555555555555443223567899999999999999999999
Q ss_pred cCCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 143 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|.||+|||+-+.... .+.+.+.+.|.|...+++-..+...+.+++.|+|. +.+.+|.+|-..+..-.|++.
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~-----~ggSiltLtYlgs~r~vPnYN 156 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN-----NGGSILTLTYLGSERVVPNYN 156 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC-----CCCcEEEEEeccceeecCCCc
Confidence 9999999999987642 45678899999999999999999999999999863 478899999888877788888
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
..+.||++|++-.+|++.+. +..++|+.+|.-|++..
T Consensus 157 vMGvAKAaLEasvRyLA~dl--G~~gIRVNaISAGPIrT 193 (259)
T COG0623 157 VMGVAKAALEASVRYLAADL--GKEGIRVNAISAGPIRT 193 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHh--CccCeEEeeecccchHH
Confidence 88999999999999999874 35577888888888754
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.3e-14 Score=164.81 Aligned_cols=268 Identities=15% Similarity=0.204 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
..|..+++.+||+|||+++++++ +|++|+..... . ...++..++..+|+.. |.++|+++|+
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~------------~-~~~~a~~v~~~lGl~~~~p~~~v~~~Ca 90 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSP------------D-EANIARVVALRLGCGEKVPAWTVQRNCA 90 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------------C-cChHHHHHHHHhCcCCCceeeeccchhh
Confidence 57889999999999999988887 78888543210 0 0134556788999954 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---H------------------H-------HHHHH------cCCC-
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---A------------------Y-------IAMTS------AGML- 672 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---~------------------~-------~~~~~------~~~l- 672 (1005)
|++.|+++|+++|++|++|.+||+|++.+.. |. . + ..+.. .|+.
T Consensus 91 Sg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 170 (426)
T PRK08170 91 SGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTD 170 (426)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccccccCccccc
Confidence 9999999999999999999999999984321 10 0 0 00000 0100
Q ss_pred --------------------C------------CC-------CC-----------CcCCCC-------------------
Q psy612 673 --------------------S------------PD-------GK-----------CYVFDE------------------- 683 (1005)
Q Consensus 673 --------------------s------------~~-------g~-----------~~pfd~------------------- 683 (1005)
+ .. |. -.|++.
T Consensus 171 ~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~~~~~~v 250 (426)
T PRK08170 171 PVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKLAKLKPF 250 (426)
T ss_pred cccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHHhcCCCc
Confidence 0 00 00 012221
Q ss_pred ---C------CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy612 684 ---R------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 684 ---~------a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~ 754 (1005)
. .|--.+++|++++||.+.+.|.+.+.++.+.|.+++.....- ..+ ..+...+++++|++|||+|+
T Consensus 251 ~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~--~~~---~~~~~~a~~~al~~aGl~~~ 325 (426)
T PRK08170 251 FDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDP--SQM---GLGPVHAATPLLQRHGLTLE 325 (426)
T ss_pred ccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCc--hhh---cccHHHHHHHHHHHcCCCHH
Confidence 0 122234899999999999999999988888999987654321 111 12346899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----hccCC-------CCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhh
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDV----FKNKT-------YNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIK 820 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~----~~~~~-------~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~ 820 (1005)
|||++|.|...+. .|+..+... |.... ....+.+| |..++. ||+.+|+|+..+...+.+|+
T Consensus 326 did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~-GHP~GAtG~~~~~~l~~~l~ 400 (426)
T PRK08170 326 DLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIAL-GHPVGASGARIVLHLLHALK 400 (426)
T ss_pred HcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHh-CCCccCccHHHHHHHHHHHH
Confidence 9999999988775 444222211 11110 00011233 455554 99999999999999988887
Q ss_pred cCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 821 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 821 ~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.. ..+++.++.-.-||.-..+|||.
T Consensus 401 ~~------------------------------------~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 401 RR------------------------------------GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred hh------------------------------------CCCeEEEEEecCCChhheEEEEe
Confidence 62 12566677667778888888874
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.1e-14 Score=163.59 Aligned_cols=244 Identities=18% Similarity=0.215 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-C-Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G-PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G-ps~~v~taCs 628 (1005)
..|+.+++.+||+|+|+++++++ .|++|..... +. ...++..++...|+. + |.++|+.+|+
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id----~vi~G~~~~~------------~~-~~~~ar~~~l~aGl~~~~p~~~V~~~Ca 94 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE----QLVFGQVVQM------------PE-APNIAREIVLGTGMNVHTDAYSVTRACA 94 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCc------------Cc-cchHHHHHHHhCCCCCCCchhhhhhhhh
Confidence 56788999999999999988876 5788854320 00 122555555667887 4 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH----------------H----------HHH-c-----------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI----------------A----------MTS-A----------- 669 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~----------------~----------~~~-~----------- 669 (1005)
||+.|+++|+++|++|++|++||||++.+.. |.... . +.. .
T Consensus 95 SG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
T TIGR02446 95 TSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYST 174 (430)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCcccccccC
Confidence 9999999999999999999999999997642 21000 0 000 0
Q ss_pred CC-C-------------C---------------C----CCC---------CcCC--------------------------
Q psy612 670 GM-L-------------S---------------P----DGK---------CYVF-------------------------- 681 (1005)
Q Consensus 670 ~~-l-------------s---------------~----~g~---------~~pf-------------------------- 681 (1005)
+. + + . +|+ -+|+
T Consensus 175 ~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t~e~~~~~~~i~ 254 (430)
T TIGR02446 175 GLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNSTLAGYAKLRPAF 254 (430)
T ss_pred CCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCCHHHHhcCCcee
Confidence 00 0 0 0 000 0111
Q ss_pred CC------CCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy612 682 DE------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK-TNGITAPNGISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 682 d~------~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~-~~~~~~p~~~~q~~~i~~al~~agi~~~ 754 (1005)
+. ..|--.+++|++++||-+.+.|.+-+.+..+.|+|++....-. ......| ..+++++|++||++|+
T Consensus 255 ~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~-----~~a~~~al~~Agl~~~ 329 (430)
T TIGR02446 255 DRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGP-----SYATPLALQRAGLALS 329 (430)
T ss_pred cCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccH-----HHHHHHHHHHcCCCHH
Confidence 10 1122234899999999999999888878888999987652111 1111122 4688999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----hccC----------CCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhh
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDV----FKNK----------TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 820 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~----~~~~----------~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~ 820 (1005)
|||++|.|...+. .|+..++.. |... ....+.-+-|..++. ||+.+|+|+..++.++.+|+
T Consensus 330 Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~-GhP~gatG~~~v~e~~~qL~ 404 (430)
T TIGR02446 330 DLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAY-GHPFAATGARMITQTLRELK 404 (430)
T ss_pred HCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhc-CCCccccHHHHHHHHHHHHh
Confidence 9999999998875 555555544 2111 000111123666665 99999999999999999998
Q ss_pred c
Q psy612 821 Y 821 (1005)
Q Consensus 821 ~ 821 (1005)
.
T Consensus 405 g 405 (430)
T TIGR02446 405 R 405 (430)
T ss_pred h
Confidence 6
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4e-14 Score=143.90 Aligned_cols=143 Identities=14% Similarity=0.166 Sum_probs=112.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++++++||||++|||+++|+.|+++|++++++..+.+..++..+++...+.++.++.+|+++.++++++++++.+.+|+|
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999865555433333445556676667778889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc----CCCcEEEEecCcccc
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK----NKLDFVCYFSSSSAI 212 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~----~~~~~iV~~SSia~~ 212 (1005)
|++|||||+.....++.+.+.++++ ..++.+++...+.+.++|++..+ .+.++|..+||.+..
T Consensus 95 DilVnnAG~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 95 DMLFQNAGLYKIDSIFSRQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred CEEEECCCcCCCCCcccccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 9999999987644556665666643 67788889999999988765322 346778888876543
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=155.61 Aligned_cols=241 Identities=19% Similarity=0.209 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
...++.+++.+||+|+|+.++++. .|++|+...++. ....+.+|+..+|+.+ |.++|.++|+
T Consensus 52 ~~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~-------------~~~~~~~i~~~lG~~~~~~~~v~~~Ca 114 (319)
T PRK09352 52 TSDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA-------------FPSTACLVQARLGAKNAAAFDLSAACS 114 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CchHHHHHHHHhCCCCCcEeeccccch
Confidence 578899999999999999887765 577776543211 1124678999999988 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||..|++.|++|++|.+||+|++.+... +. ++....+++.|+|+++++|++..+.
T Consensus 115 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~~~~~~~~~gDGaaA~ll~~~~~~--- 173 (319)
T PRK09352 115 GFVYALSTADQFIRSGAYKNVLVIGAEKLSRI-----------VD-------WTDRSTCVLFGDGAGAVVLGASEEP--- 173 (319)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhccc-----------cC-------cccCCceEEEeccceEEEEEEcCCC---
Confidence 99999999999999999999999999973211 11 1222356899999999999975442
Q ss_pred CCceEEEEEEeeeccCCCC-CCCCCCC-----------------------HHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 709 GDPIHAIIRGSGINYDGKT-NGITAPN-----------------------GISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~~-~~~~~p~-----------------------~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
.+. ++.+.++|.. ..++.|. .....++++++|+++|++++||+|+-.|..
T Consensus 174 --~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~ 247 (319)
T PRK09352 174 --GIL----STHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQA 247 (319)
T ss_pred --CeE----EEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 222 2222223211 1111111 122456899999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
+... ...+.+.++-... .+ -..-..+||+.+|+=+..|...+ +.+.+.|
T Consensus 248 ~~~~-----~~~~~~~lg~~~~---~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~~~------------------ 296 (319)
T PRK09352 248 NLRI-----IDATAKKLGLPME---KV--VVTVDKYGNTSAASIPLALDEAV---RDGRIKR------------------ 296 (319)
T ss_pred CHHH-----HHHHHHHhCCCHH---Hh--hhhHHhhCCHHHHHHHHHHHHHH---HcCCCCC------------------
Confidence 5432 2334444442211 11 12345789999998777775443 3332111
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
.....+-|||.|-+-..++|+
T Consensus 297 ---------------Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 297 ---------------GDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred ---------------CCEEEEEEEchhheeEEEEEE
Confidence 134568889999988888876
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-13 Score=155.73 Aligned_cols=246 Identities=14% Similarity=0.148 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHhcC-CCC-CCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccc
Q psy612 551 QRHLLQESWLALEDAG-YGP-NQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG-~~~-~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taC 627 (1005)
..|+.|++++||+||| +++ ++++ |++++.. +... .. .+....++..+++. .|.+.| |
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId----~~~~~~~--~~~~----~~-------~~~~~~~~~~lg~~~~~~~~v---~ 85 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD----SFISCQE--DFWE----GI-------AIADEFAPDQIGGAMRPTMTV---A 85 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC----EEEEecC--cccC----cc-------cccchhHHHHcccCCCCeEEE---e
Confidence 5789999999999999 986 6776 6666531 1110 00 01112355778884 577776 8
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC------------------------HHHHHHH------HHcCCCC----
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS------------------------PEAYIAM------TSAGMLS---- 673 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~------------------------~~~~~~~------~~~~~ls---- 673 (1005)
+|+..|++.|+++|++|+||.+||.|++.... |..++.+ .+.|.-.
T Consensus 86 ~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA 165 (385)
T PRK06066 86 GDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLA 165 (385)
T ss_pred CcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999999999999874321 0001000 0111100
Q ss_pred -------CCCCCcCCCCC---------------------CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCC
Q psy612 674 -------PDGKCYVFDER---------------------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 725 (1005)
Q Consensus 674 -------~~g~~~pfd~~---------------------a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG 725 (1005)
.++.-+|...- .|--.+++|++++||.+.+.|.+-+++.- .|+|++...+.
T Consensus 166 ~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~ 244 (385)
T PRK06066 166 LVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTES 244 (385)
T ss_pred HHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCC
Confidence 01111111111 11122589999999999999987766554 78988876543
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hcc-----------CCCCCCc
Q psy612 726 KTNGITA-PNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKN-----------KTYNQKF 790 (1005)
Q Consensus 726 ~~~~~~~-p~~~~q~~~i~~al~~agi~--~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~-----------~~~~~~~ 790 (1005)
....... ........+.+++|++|||+ ++|||++|.|...|. .|+..++.. |.. .......
T Consensus 245 ~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~ 320 (385)
T PRK06066 245 SNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEPEKDSLLREGNFDPQGE 320 (385)
T ss_pred cccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence 2111111 12233346899999999997 699999999998885 444444332 111 1112233
Q ss_pred eeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 791 CAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 791 ~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
+|| |..++. ||+.+|+|+..++.++.+|+.+
T Consensus 321 ~PvN~~GG~la~-Ghp~gatG~~~v~e~~~QL~g~ 354 (385)
T PRK06066 321 LPVNPSGGHLAK-GVPLEASGLSLLLDAVEYLRGE 354 (385)
T ss_pred ccccCCCchhcC-CCccchhHHHHHHHHHHHHccc
Confidence 555 666666 9999999999999999999874
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=154.84 Aligned_cols=246 Identities=16% Similarity=0.164 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC---Cccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG---PVMAINTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G---ps~~v~ta 626 (1005)
...+..+++.+||++||+.+++++ .+++++..+++. ....+.++...+|+++ |++.|+.+
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~-------------~p~~a~~v~~~lgl~~~~~~~~~v~~~ 114 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID----CIICASGTIQQA-------------IPCTASLIQEQLGLQHSGIPCFDINST 114 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC-------------CccHHHHHHHHhCCCCCCceEEEccch
Confidence 356899999999999999987775 456665433211 1245778999999986 89999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||++|...|++|.++.+||.+++..... + .|+...++++.|+|++++||++.+..
T Consensus 115 C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~lfGDGAaA~ll~~~~~~- 175 (329)
T PRK07204 115 CLSFITALDTISYAIECGRYKRVLIISSEISSVG-----------L-------NWGQNESCILFGDGAAAVVITKGDHS- 175 (329)
T ss_pred hHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCC-----------C-------CcccCcceEEEecccEEEEEEEcCCC-
Confidence 9999999999999999999999999999963211 0 12334467899999999999975432
Q ss_pred cCCCceEE-------------EEEEeeeccCCCCCC-------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccE
Q psy612 707 SDGDPIHA-------------IIRGSGINYDGKTNG-------ITAPNG--------ISQTELIKSVYKKSNLNPEDINY 758 (1005)
Q Consensus 707 ~~g~~I~a-------------vI~g~~~~~dG~~~~-------~~~p~~--------~~q~~~i~~al~~agi~~~~I~y 758 (1005)
.+|.+ .+++.+...+..... ....++ ....++++++|+++|++++||+|
T Consensus 176 ---~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~ 252 (329)
T PRK07204 176 ---SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDL 252 (329)
T ss_pred ---CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 23322 233322211110000 000111 12447899999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII 838 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~ 838 (1005)
+-.|..+.+. .+++.+.++-... + +-.+...+||+.+|+=...|... ++.+.+.|
T Consensus 253 ~~~H~~~~~~-----~~~i~~~l~l~~e--~---~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~~~------------ 307 (329)
T PRK07204 253 IVPHQASGPA-----MRLIRKKLGVDEE--R---FVTIFEDHGNMIAASIPVALFEA---IKQKKVQR------------ 307 (329)
T ss_pred EEeCCCCHHH-----HHHHHHHcCCCHH--H---hhhhHhhhCcHHHHHHHHHHHHH---HHcCCCCC------------
Confidence 9999998864 4566777764321 1 23577889999987755554432 23332211
Q ss_pred cCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 839 LKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 839 ~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
....++.+||.|-+-+.++|+
T Consensus 308 ---------------------Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 308 ---------------------GNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred ---------------------CCEEEEEEEchhhhheeeEEe
Confidence 134578899999999999886
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=157.53 Aligned_cols=247 Identities=17% Similarity=0.174 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHH-HHHHHhCCCC-Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA-RLAYFMDLKG-PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~-ris~~~~l~G-ps~~v~taC 627 (1005)
-..+..++..+||+|+|+++++++ .|++|+...++. + . .++. -+...+++.+ |+++|+++|
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~----------g--~-~~~~~~~~~~lg~~~~p~~~V~~~C 85 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGE----------G--Q-NCAQQAAMHAGGLQEAPAIGMNNLC 85 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCcc----------c--C-cHHHHHHHHcCCCCCCcEEEecchh
Confidence 456778899999999999988876 678886554321 0 0 1111 1456677776 999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH------------------------HHH------HHHcCCCC---
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------------------------YIA------MTSAGMLS--- 673 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~------------------------~~~------~~~~~~ls--- 673 (1005)
+|++.|++.|++.|++|++|++||+|++.+.. +.. +.. +.+.|...
T Consensus 86 asg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~G~~~e~~ 165 (393)
T cd00826 86 GSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEF 165 (393)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHcCCCHHHE
Confidence 99999999999999999999999999886432 100 000 01122211
Q ss_pred -----CC--C----CCcCCCCCC-----------------CCce-------ecCccEEEEEcccchhhcCC---CceEEE
Q psy612 674 -----PD--G----KCYVFDERA-----------------NGLV-------PSEAVVAVVLKRLSRALSDG---DPIHAI 715 (1005)
Q Consensus 674 -----~~--g----~~~pfd~~a-----------------~G~~-------~gEGa~~vvLk~l~~A~~~g---~~I~av 715 (1005)
.+ | .-.|+.... ++.+ +++|++++||.+.+.|.+-| ++| .
T Consensus 166 a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v--~ 243 (393)
T cd00826 166 AKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAR--E 243 (393)
T ss_pred EEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCccccc--c
Confidence 11 0 011222110 1222 37999999999999898765 233 3
Q ss_pred EEEeeeccCCCCCCCCCC------CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccC----
Q psy612 716 IRGSGINYDGKTNGITAP------NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK---- 784 (1005)
Q Consensus 716 I~g~~~~~dG~~~~~~~p------~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~---- 784 (1005)
|++.+...+..... ..| ...+...++++||++|||+|+|||++|.|...+. .|+..++.. |...
T Consensus 244 i~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~e~lgl~~~g~~~ 318 (393)
T cd00826 244 IQALEMITDMASTF-EDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATNEALGLCPEGQGG 318 (393)
T ss_pred cceEEEEEeeeccc-cCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHHHHhCCCcccchh
Confidence 44443322211100 011 1233478999999999999999999999988764 455554443 2211
Q ss_pred -------CCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 785 -------TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 785 -------~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
......++| |..++. ||+.+|+|+..++.++.+|+.
T Consensus 319 ~~~~~g~~~~~G~~pvN~~GG~la~-GhP~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 319 ALVDRGDNTYGGKSIINPNGGAIAI-GHPIGASGAAICAELCFELKG 364 (393)
T ss_pred hhhhcCccccCCcceECCCCchhhc-CCCccccHHHHHHHHHHHHhh
Confidence 111122445 666666 999999999999999999975
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.5e-13 Score=154.45 Aligned_cols=273 Identities=17% Similarity=0.205 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHH--hCCCCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYF--MDLKGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~--~~l~Gps~~v~taCs 628 (1005)
.-|..+++.+||+|+|+++++++ .|++|...... . ...++..++.. ++...|+++|+++|+
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id----~vv~G~~~~~~------------~-~~~~~r~~~l~~gl~~~~p~~~V~~~Ca 94 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG----EVVAGAVLKHS------------R-DFNLTRECVLGSALSPYTPAYDLQQACG 94 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC------------c-cccHHHHHHHHcCCCCCCceeeeechhh
Confidence 46778999999999999988887 68888543210 0 01133333344 455789999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHHH---------------------------HHH------H-----c
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI---------------------------AMT------S-----A 669 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~~---------------------------~~~------~-----~ 669 (1005)
||+.|+.+|++.|++|++|++||||++.+.. |.... ... . .
T Consensus 95 SG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (427)
T PRK09268 95 TGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRT 174 (427)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCcccccccc
Confidence 9999999999999999999999999985431 11000 000 0 0
Q ss_pred CC-C-------------C-----------------------------CC------CCCc-------------CCCCCCCC
Q psy612 670 GM-L-------------S-----------------------------PD------GKCY-------------VFDERANG 687 (1005)
Q Consensus 670 ~~-l-------------s-----------------------------~~------g~~~-------------pfd~~a~G 687 (1005)
++ + + |- ...| .|+.+-+|
T Consensus 175 ~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~l~~~~~v~~p~~~g 254 (427)
T PRK09268 175 GLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEKLAKLKPVFGKGGRA 254 (427)
T ss_pred CCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHHHhCCCcccccCCCC
Confidence 11 0 0 11 0111 12221124
Q ss_pred ce-------ecCccEEEEEcccchhhcCCCceEEEE-EEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy612 688 LV-------PSEAVVAVVLKRLSRALSDGDPIHAII-RGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 759 (1005)
Q Consensus 688 ~~-------~gEGa~~vvLk~l~~A~~~g~~I~avI-~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yv 759 (1005)
.+ +++|++++||.+.+.|.+-+.++.++| .+.+..++....... -..+...+++++|++||++|+|||++
T Consensus 255 ~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~--~~~~~~~a~~~a~~~AGl~~~Did~~ 332 (427)
T PRK09268 255 TMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEG--LLMAPAYAVPRLLARNGLTLQDFDFY 332 (427)
T ss_pred ceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccch--hhccHHHHHHHHHHHcCCCHHHCCEE
Confidence 33 588999999999999988887776666 666666664211000 11233468999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHH-hccCCC-------CCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCC
Q psy612 760 ITHGTGTKLGDPVEINALHDV-FKNKTY-------NQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 828 (1005)
Q Consensus 760 e~hgtgt~~gD~~E~~al~~~-~~~~~~-------~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~ 828 (1005)
|.|...+.. -..|+..+... |..... ....++| |..++. ||+.+|+|+..++.++.+|+.+
T Consensus 333 Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~-GhP~gATG~~~v~e~~~QL~~~------ 404 (427)
T PRK09268 333 EIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAA-GHPFAATGGRIVATLAKLLAEK------ 404 (427)
T ss_pred EeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhc-CCCcccchHHHHHHHHHHHHhc------
Confidence 999888752 11244333211 111000 0002344 444444 9999999999999999999762
Q ss_pred CCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 829 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 829 ~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+++.++.-+-||.-..+|||
T Consensus 405 ------------------------------~~~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 405 ------------------------------GSGRGLISICAAGGQGVTAILE 426 (427)
T ss_pred ------------------------------CCCEEEEEEcccCchheEEEEe
Confidence 1256777777778888888887
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.9e-12 Score=144.27 Aligned_cols=236 Identities=17% Similarity=0.189 Sum_probs=157.0
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-C-Cccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G-PVMAIN 624 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G-ps~~v~ 624 (1005)
+.| ..|+.++..++ ++|++ ++++ .|++|...+. . ..++..++...|+. + |+++|+
T Consensus 23 ~~~-~~L~~~a~~~~--~~gi~-~~Id----~vi~G~~~~~--------------~-~~~~r~~~~~~Gl~~~~p~~tV~ 79 (361)
T PRK06690 23 YEV-QQLAAPLLTFL--SKGME-REID----DVILGNVVGP--------------G-GNVARLSALEAGLGLHIPGVTID 79 (361)
T ss_pred CCH-HHHHHHHHHHH--Hccch-hhcC----EEEEEecCCC--------------c-chHHHHHHHHcCCCCCCCceehh
Confidence 344 45556666665 44885 5665 6888865321 0 12232367788886 4 999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH----H---------HH------HHHcCCCC-----------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA----Y---------IA------MTSAGMLS----------- 673 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~----~---------~~------~~~~~~ls----------- 673 (1005)
++|+||+.|+..|++.|++|++|++||||++.+.. |.. + +. ..+.|+-.
T Consensus 80 ~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~ 159 (361)
T PRK06690 80 RQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSY 159 (361)
T ss_pred hhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999996542 210 0 00 00111100
Q ss_pred -------CCCC---------------C--------------cCCCCCCCCce-------ecCccEEEEEcccchhhcCCC
Q psy612 674 -------PDGK---------------C--------------YVFDERANGLV-------PSEAVVAVVLKRLSRALSDGD 710 (1005)
Q Consensus 674 -------~~g~---------------~--------------~pfd~~a~G~~-------~gEGa~~vvLk~l~~A~~~g~ 710 (1005)
.++. . ..|+. +|.+ +++|++++||.+.+.|.+.|.
T Consensus 160 k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~--~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~ 237 (361)
T PRK06690 160 KRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLH--NGTVTAGNSCGVNDGACAVLVMEEGQARKLGY 237 (361)
T ss_pred HHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccC--CCceeccccCCCCCCeEEEEEecHHHHHHcCC
Confidence 1111 1 11221 3444 489999999999999999998
Q ss_pred ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
++.+.|.|++....-. .. ...+...+++++|+++|++|+||+++|.|-..+. .++..++ .++-. ..+
T Consensus 238 ~p~~~i~~~~~~~~~~--~~---~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~e-~lgl~---~~~ 304 (361)
T PRK06690 238 KPVLRFVRSAVVGVDP--NL---PGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACAK-ELQIP---YEK 304 (361)
T ss_pred CceEEEEEEEEeccCc--cc---chhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHHH-hcCCC---chh
Confidence 8888899988654211 11 1346678999999999999999999999976553 2332222 22211 112
Q ss_pred e-eEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 791 C-AITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 791 ~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
+ +-|..++. ||+.+++|+..++.++.+|+.
T Consensus 305 vn~~GG~la~-Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 305 LNVNGGAIAL-GHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred cccCCcHHhc-cCchhhhHHHHHHHHHHHHHH
Confidence 2 23444444 999999999999999999876
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=148.89 Aligned_cols=241 Identities=14% Similarity=0.103 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
..|+.|++++||+|||+++++++ +++++.. . . .. ...++..+|+++ |...|.++|+
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~-~-~------------~~----~~~l~~~lGl~~~~~~~~v~~gg~ 82 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD----GLVTFTM-D-T------------NP----EIAVARALGIGELKFFSRIHYGGG 82 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecC-c-c------------cc----HHHHHHHCCCCCCcceeeecCCcH
Confidence 46889999999999999888877 5555321 0 0 00 124888999987 4468899999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeec--ccCCCHH------------H---HHHH-HHcCCCC-----------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGV--NLMISPE------------A---YIAM-TSAGMLS----------------- 673 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv--~~~~~~~------------~---~~~~-~~~~~ls----------------- 673 (1005)
|+..+++.|+++|++|+||++||.|+ +...... . ...+ ...|+..
T Consensus 83 sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~~G 162 (386)
T PRK07855 83 AACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRYMHEYG 162 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999987 2110000 0 0000 0122211
Q ss_pred --------------CCCCCcCCCCCC----------------------CCceecCccEEEEEcccchhhcCCCceEEEEE
Q psy612 674 --------------PDGKCYVFDERA----------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIR 717 (1005)
Q Consensus 674 --------------~~g~~~pfd~~a----------------------~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~ 717 (1005)
.++.-+|+..-. |--.+++|++++||-+.+.|.+-+++. ..|+
T Consensus 163 ~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~ 241 (386)
T PRK07855 163 ATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIK 241 (386)
T ss_pred CCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEE
Confidence 112223332211 112248999999999999998766654 4899
Q ss_pred EeeeccCCCCCCC-----CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hc--------
Q psy612 718 GSGINYDGKTNGI-----TAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FK-------- 782 (1005)
Q Consensus 718 g~~~~~dG~~~~~-----~~p-~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~-------- 782 (1005)
|++..++.....+ ..+ .....+.++++||++||++|+|||++|.|.+.|. .|+..++.. |.
T Consensus 242 g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~~E~lG~~~~Ge~~~~ 317 (386)
T PRK07855 242 AAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQLEELGFCGRGEAKDF 317 (386)
T ss_pred EEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHHHHHcCCCCCCcHHHH
Confidence 9987654332111 001 1234457999999999999999999999999886 555544433 21
Q ss_pred ---cCCCCCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 783 ---NKTYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 783 ---~~~~~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
........+|| |..|++ ||+. |+.+++.+++||+..
T Consensus 318 v~~G~~~~~G~lPvN~sGGll~~-gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 318 IADGALELGGRLPINTHGGQLGE-AYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred HHCCCcccCCcccccCCCccccc-Cchh---hHHHHHHHHHHHhCC
Confidence 12222345788 889987 8965 999999999999985
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=147.63 Aligned_cols=241 Identities=20% Similarity=0.260 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..++++++.+||++||+++++++ .++++....++. ....+.+++..+|+++ |.+.|+.+|+|
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~-------------~~~~a~~l~~~lGl~~~~~~~v~~~C~s 114 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA-------------FPSAACMVQAYLGIKGIPAFDLSAACAG 114 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC-------------CChHHHHHHHHhCCCCCcEeehhhhhHH
Confidence 67899999999999999887765 566665433221 1124678999999999 99999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||++|+..|++|.++.+||+|++..... + ++. .....++.|+|++++||.+.+...
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~-----------~------~~~-~~~~~~~~GDGAaA~lL~~~~~~~--- 173 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLSST-----------L------DWT-DRGTCVLFGDGAGAVVLGESEDPG--- 173 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C------CcC-CCCeEEEEecceeEEEEeecCCCC---
Confidence 9999999999999999999999999974322 1 111 123456899999999998755431
Q ss_pred CceEEEEEEeeeccCCCC-CCCCCC------------------C-----HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 710 DPIHAIIRGSGINYDGKT-NGITAP------------------N-----GISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~~-~~~~~p------------------~-----~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
.| ..+.+..+|.. ..++.| . .....++++++|+++|++++||+|+..|..+
T Consensus 174 -~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~ 248 (318)
T TIGR00747 174 -GI----ISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQAN 248 (318)
T ss_pred -cE----EEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC
Confidence 12 22222223211 111101 0 1223567899999999999999999999887
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCee
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~ 845 (1005)
.+.- ..+.+.++-...+ .. -.. ..+||+.+|+=...|..++ +++.+++
T Consensus 249 ~~~~-----~~~~~~lgi~~~k---~~-~~~-~~~Gn~~sas~~~~L~~~~---~~~~~~~------------------- 296 (318)
T TIGR00747 249 LRII-----EALAKRLELDMSQ---VV-KTV-HKYGNTSAASIPLALDELL---RTGRIKP------------------- 296 (318)
T ss_pred HHHH-----HHHHHHcCCCHHH---ee-ehH-hhhCCHHHHHHHHHHHHHH---HcCCCCC-------------------
Confidence 6533 3344445432211 11 223 3489999998777665533 3332211
Q ss_pred eccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 846 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 846 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++-+||.|.+-..++|+
T Consensus 297 --------------Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 297 --------------GDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred --------------CCEEEEEEEehhheeeEEEEE
Confidence 123568889999998888875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-12 Score=146.52 Aligned_cols=263 Identities=15% Similarity=0.182 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccchh
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACSS 629 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCsS 629 (1005)
.|.-.+..++|+.+|++++.++ -|++|...... .....++-.++..-|| +=|.+||+..|+|
T Consensus 31 ~L~~~~~~~~l~r~~i~~~~id----~vi~G~~~~~g------------~~g~n~aR~~al~aglp~~vp~~tvnr~C~S 94 (417)
T PRK06025 31 HLAATVLKALAERNGLNTADVD----DIIWSTSSQRG------------KQGGDLGRMAALDAGYDIKASGVTLDRFCGG 94 (417)
T ss_pred HHHHHHHHHHHHhcCCCHHHCC----EEEEEcCCCcC------------cccCcHHHHHHHhCCCCCCCCeeeeccccch
Confidence 3445678899999999888776 57888653210 0011244444555565 4499999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCC-CHHHHH-----H-----HHH--cCC---C---C-----------------
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMI-SPEAYI-----A-----MTS--AGM---L---S----------------- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~-~~~~~~-----~-----~~~--~~~---l---s----------------- 673 (1005)
||.||.+|++.|+.|++|++|+||++.+. .|+... . ... .++ . +
T Consensus 95 gl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~~isRe 174 (417)
T PRK06025 95 GITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITRE 174 (417)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999998655 232000 0 000 000 0 0
Q ss_pred ---------------------------C------------CC------------CCc-CCCCC------CCCc-------
Q psy612 674 ---------------------------P------------DG------------KCY-VFDER------ANGL------- 688 (1005)
Q Consensus 674 ---------------------------~------------~g------------~~~-pfd~~------a~G~------- 688 (1005)
| |. +-+ .|+.. .+|.
T Consensus 175 ~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~~~~~~~ 254 (417)
T PRK06025 175 ALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLIN 254 (417)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccccccccc
Confidence 0 11 112 24420 1354
Q ss_pred ------------------eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy612 689 ------------------VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSN 750 (1005)
Q Consensus 689 ------------------~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~ag 750 (1005)
..++|++++||.+.+.|.+.|.++++.|.|++...+...... .+...+++++|+++|
T Consensus 255 ~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~-----~~p~~Ai~~aL~~AG 329 (417)
T PRK06025 255 QKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLML-----NAPVPAAKKVLAKAG 329 (417)
T ss_pred cccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHHHHHHcC
Confidence 248999999999999999999999999999998755422111 123578999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHH--HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCC
Q psy612 751 LNPEDINYIITHGTGTKLGDPVEIN--ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 828 (1005)
Q Consensus 751 i~~~~I~yve~hgtgt~~gD~~E~~--al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~ 828 (1005)
++++|||++|.|-. .... +..+.++-. ..++.+..-+-.+||+.+|+|+..++.++.+|+.+
T Consensus 330 l~~~DID~~ei~ea-------Fa~~~l~~~~~lg~~---~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~------ 393 (417)
T PRK06025 330 LTKDDIDLWEINEA-------FAVVAEKFIRDLDLD---RDKVNVNGGAIALGHPIGATGSILIGTVLDELERR------ 393 (417)
T ss_pred CCHHHCcEEEEchH-------HHHHHHHHHHHcCCC---hhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh------
Confidence 99999999999843 3333 222333321 12344555555679999999999999999998652
Q ss_pred CCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 829 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 829 ~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.+.-.+.||.-..+|||.
T Consensus 394 ------------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 ------------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred ------------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 01344555567788888899884
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.7e-12 Score=142.12 Aligned_cols=170 Identities=17% Similarity=0.132 Sum_probs=122.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||+|+||+.+++.|+++|..++++.++..........+... ..++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 4789999999999999999999999987655554443333322222211 2468889999999998887764
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----C--
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----G-- 217 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-----g-- 217 (1005)
.+|+|||+||... . ..+.+.+...+++|+.|++++.+++.+. ...+.||++||+++..+.. +
T Consensus 77 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~------~~~~~iv~~SS~~~~~~~~~~~~~~~~ 145 (325)
T PLN02989 77 GCETVFHTASPVA-I----TVKTDPQVELINPAVNGTINVLRTCTKV------SSVKRVILTSSMAAVLAPETKLGPNDV 145 (325)
T ss_pred CCCEEEEeCCCCC-C----CCCCChHHHHHHHHHHHHHHHHHHHHHc------CCceEEEEecchhheecCCccCCCCCc
Confidence 4899999999643 1 2234567889999999999999997553 1246899999987764421 0
Q ss_pred ---------------ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCcc
Q psy612 218 ---------------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 218 ---------------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~G 260 (1005)
...|+.+|.+.+.++....+. ++ +++.+..+..-+.+
T Consensus 146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilR~~~vyGp~ 198 (325)
T PLN02989 146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEI------DLIVLNPGLVTGPI 198 (325)
T ss_pred cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCC------eEEEEcCCceeCCC
Confidence 246999999999888765443 44 77777776665444
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.1e-12 Score=145.72 Aligned_cols=239 Identities=19% Similarity=0.204 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
...|+.+++.+||+++|++++++. .+++++..+++. .+ ..+.++...+|+++ |++.|..+|+
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId----~li~~s~~~~~~------------~p-~~a~~v~~~Lgl~~~~~~~v~~~Ca 125 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE----LLACGTSQPDQL------------MP-GHASMVHGELGAPPIEVVSSAGVCA 125 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEECCCCcC------------Ch-HHHHHHHhhCCCCCCceeeecCcCH
Confidence 468899999999999999887775 466766543211 11 13467888889876 8899999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHH-cCCCC--CCCCCcCCCCCCCCceecCccEEEEEcccchh
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTS-AGMLS--PDGKCYVFDERANGLVPSEAVVAVVLKRLSRA 705 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~-~~~ls--~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A 705 (1005)
|++.||+.|...|++|.++.+||.|++.+........+.. .+.++ ++..+++|+.+.+||+.|+|++++||++.++.
T Consensus 126 s~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~ 205 (378)
T PRK06816 126 AGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRP 205 (378)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCC
Confidence 9999999999999999999999999997544332211211 12222 23468999999999999999999999865442
Q ss_pred hcCCCc--eEEEEEEee-ec------------cCCCCCCC-C-CC-------------CHHHH--------HHHHHHHHH
Q psy612 706 LSDGDP--IHAIIRGSG-IN------------YDGKTNGI-T-AP-------------NGISQ--------TELIKSVYK 747 (1005)
Q Consensus 706 ~~~g~~--I~avI~g~~-~~------------~dG~~~~~-~-~p-------------~~~~q--------~~~i~~al~ 747 (1005)
.|.. ++....++. .. .++..... . .+ +.... ...++++|+
T Consensus 206 --~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 283 (378)
T PRK06816 206 --DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVD 283 (378)
T ss_pred --CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHH
Confidence 2221 111111111 00 01100000 0 00 11111 567788999
Q ss_pred HcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhc---cCCCCCCceeEeccCCCcCchhhchhhHHHHHH
Q psy612 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK---NKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 748 ~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~---~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~ 815 (1005)
++|++++||+|+-.|-...+..+ ++.+.+. -.-+..+ +. ..+ ..+||+.+|+-...|..+
T Consensus 284 ~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~~~k-~~-~~~-~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 284 KRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIPEEK-WF-TNL-ATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCChhh-eE-Eec-cccccccchHHHHHHHHH
Confidence 99999999999999977655443 3333331 0111111 22 223 378999999877776544
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.3e-12 Score=144.52 Aligned_cols=166 Identities=21% Similarity=0.247 Sum_probs=119.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+++++|||||+|+||+.+++.|+++| ...|++..|+... ..+.+.+. +.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------- 73 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------- 73 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-------
Confidence 47899999999999999999999997 3456666665322 22222221 2468889999999998877663
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
.+|+|||+||... . +..+.++ ...+++|+.|++++.+++.+ .+.++||++||.....+ ...|+++
T Consensus 74 ~iD~Vih~Ag~~~-~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~-------~~~~~iV~~SS~~~~~p---~~~Y~~s 138 (324)
T TIGR03589 74 GVDYVVHAAALKQ-V-PAAEYNP---FECIRTNINGAQNVIDAAID-------NGVKRVVALSTDKAANP---INLYGAT 138 (324)
T ss_pred cCCEEEECcccCC-C-chhhcCH---HHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEeCCCCCCC---CCHHHHH
Confidence 4899999999754 2 2333333 46899999999999999643 24568999999765432 4679999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|++.+.+++....... ..+++++++..+...+
T Consensus 139 K~~~E~l~~~~~~~~~--~~gi~~~~lR~g~v~G 170 (324)
T TIGR03589 139 KLASDKLFVAANNISG--SKGTRFSVVRYGNVVG 170 (324)
T ss_pred HHHHHHHHHHHHhhcc--ccCcEEEEEeecceeC
Confidence 9999999876543211 2345888888876643
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-12 Score=148.24 Aligned_cols=206 Identities=10% Similarity=-0.019 Sum_probs=131.0
Q ss_pred CccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-----CC----CcEEEEEecCCCHHHH
Q psy612 62 NSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FN----NKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 62 ~~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-----~g----~~v~~~~~Dvtd~~~v 132 (1005)
....+.++++|||||+||||+.++++|+++|++++++.++.+....+.+.+.+ .| .++.++.+|++|.+++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 45567899999999999999999999999998766665554444444444432 12 3588999999998887
Q ss_pred HHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy612 133 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 212 (1005)
Q Consensus 133 ~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~ 212 (1005)
.+ .++++|+||||+|... . ...+|...+++|+.|+.++.+++.. ...++||++||+.+.
T Consensus 154 ~~-------aLggiDiVVn~AG~~~-~------~v~d~~~~~~VN~~Gt~nLl~Aa~~-------agVgRIV~VSSiga~ 212 (576)
T PLN03209 154 GP-------ALGNASVVICCIGASE-K------EVFDVTGPYRIDYLATKNLVDAATV-------AKVNHFILVTSLGTN 212 (576)
T ss_pred HH-------HhcCCCEEEEcccccc-c------cccchhhHHHHHHHHHHHHHHHHHH-------hCCCEEEEEccchhc
Confidence 54 3468999999999754 2 1124778899999999999998543 256799999998764
Q ss_pred -cCCCCChhhhHHHHHHHH----HHHHHHhccccccCCceEEEEeCCcccCcccccc-cchhhhHHHHhcC-CCCCCHHH
Q psy612 213 -LGDFGSCDYAMGNRFQTV----YAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNEQTDFYFKSSK-QKVLHEND 285 (1005)
Q Consensus 213 -~g~~g~~~Yaaana~l~~----la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~~~~~~~~~~g-~~~l~~~~ 285 (1005)
.+.+.. .|. .++++.. +.++++..|+ +++.|..|... +.|... ............. -+.++.++
T Consensus 213 ~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGI------rvTIVRPG~L~-tp~d~~~~t~~v~~~~~d~~~gr~isreD 283 (576)
T PLN03209 213 KVGFPAA-ILN-LFWGVLCWKRKAEEALIASGL------PYTIVRPGGME-RPTDAYKETHNLTLSEEDTLFGGQVSNLQ 283 (576)
T ss_pred ccCcccc-chh-hHHHHHHHHHHHHHHHHHcCC------CEEEEECCeec-CCccccccccceeeccccccCCCccCHHH
Confidence 333322 233 3433322 2333444444 78888776553 222110 0000000001111 12467888
Q ss_pred HHHHHHHHHhcc
Q psy612 286 GLKLFEQLLIQD 297 (1005)
Q Consensus 286 ~~~~l~~~l~~~ 297 (1005)
.++++..++..+
T Consensus 284 VA~vVvfLasd~ 295 (576)
T PLN03209 284 VAELMACMAKNR 295 (576)
T ss_pred HHHHHHHHHcCc
Confidence 888887776644
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=147.34 Aligned_cols=214 Identities=19% Similarity=0.223 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC-CCCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~Gps~~v~taCs 628 (1005)
...++.+++.+||+++|+++++++ .+++++....+. ....+.+++..+|+ +.|++.|+.+|+
T Consensus 50 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~~~~l~~~lg~~~~~~~~v~~~C~ 112 (320)
T cd00830 50 TSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL-------------FPATACLVQARLGAKNAAAFDINAACS 112 (320)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CCcHHHHHHHHhCCCCCcEeeccccch
Confidence 478899999999999999887765 566665433221 11256789999999 668899999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||++|++.|++|.++.+||++++...... .|+....+++.|+|++++||++.+.
T Consensus 113 s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~~---- 170 (320)
T cd00830 113 GFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEATEE---- 170 (320)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEecCC----
Confidence 999999999999999999999999999732210 1445567899999999999997543
Q ss_pred CCceEEEEEEeeeccCCCCC-CC-------C----------------CCC-----HHHHHHHHHHHHHHcCCCCCCccEE
Q psy612 709 GDPIHAIIRGSGINYDGKTN-GI-------T----------------APN-----GISQTELIKSVYKKSNLNPEDINYI 759 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~~~-~~-------~----------------~p~-----~~~q~~~i~~al~~agi~~~~I~yv 759 (1005)
+.+|... ...+++... .+ . .+. .....++++++|+++|++++||+|+
T Consensus 171 ~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~ 246 (320)
T cd00830 171 DPGILDS----VLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWF 246 (320)
T ss_pred CCcEEEE----EEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEE
Confidence 2344332 222222110 00 0 000 1233578999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHH
Q psy612 760 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 816 (1005)
Q Consensus 760 e~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~ 816 (1005)
-.|..+.+.-+ .+.+.++-...+ . -.+-..+||+.+|+=...|..++
T Consensus 247 ~~h~~~~~~~~-----~~~~~lgl~~~~---~--~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 247 VPHQANLRIIE-----AVAKRLGLPEEK---V--VVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred EECCCCHHHHH-----HHHHHhCCCHHH---h--hhhHHhhCcHHHHHHHHHHHHHH
Confidence 99988765433 344445432111 1 12345789999998777776553
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-11 Score=135.66 Aligned_cols=183 Identities=13% Similarity=-0.027 Sum_probs=133.4
Q ss_pred cCCCEEEEECChhHHHHH--HHHHHHHcCCcEEEEecCCCch------------HHHHHHHHhCCCcEEEEEecCCCHHH
Q psy612 66 KQGGTYLITGGTGRLGML--FSDYLINKYSTNLILSGRSKLN------------SIIYKKLKKFNNKAIYIQVDVSDKLK 131 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~a--iA~~La~~Ga~~vil~~r~~~~------------~~~~~~l~~~g~~v~~~~~Dvtd~~~ 131 (1005)
..+|++||||+++|||++ +|+.| ++|++++++....+.. +.+.+.+++.|..+..+.||++++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 457899999999999999 89999 9999877765432211 23444556667778889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCcccCccc--------------------h-------------hccCCHHHHHHHHhhhh
Q psy612 132 MISEINSIINNIGPIDGVLHIAGISGLTS--------------------N-------------ILEANYKNFYSVLSSKI 178 (1005)
Q Consensus 132 v~~~~~~i~~~~g~idgvIh~AG~~~~~~--------------------~-------------~~~~t~~~~~~~l~~kv 178 (1005)
++++++.+.+++|+||+||||+|...... . +...+.++++.+ +|+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~v 195 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKV 195 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHh
Confidence 99999999999999999999999763111 0 113455555554 356
Q ss_pred hHH-----HHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhHHHHHHHHHHHHHHhccccccCCceEEEE
Q psy612 179 SGT-----IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITI 251 (1005)
Q Consensus 179 ~g~-----~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si 251 (1005)
+|. |.=.....+.| .+...+|.+|++.+..-.|.+ ..-+.||+.|++-+++++.+.- ..++++.++
T Consensus 196 Mggedw~~Wi~al~~a~ll-----a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~--~~giran~i 268 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVL-----AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA--AKGGDAYVS 268 (398)
T ss_pred hccchHHHHHHHHHhcccc-----cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh--hcCCEEEEE
Confidence 665 22223333332 246789999998877665554 5778999999999999998754 456688888
Q ss_pred eCCcccC
Q psy612 252 NWPLWNN 258 (1005)
Q Consensus 252 ~wg~w~~ 258 (1005)
.-++...
T Consensus 269 ~~g~~~T 275 (398)
T PRK13656 269 VLKAVVT 275 (398)
T ss_pred ecCcccc
Confidence 7777643
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.9e-12 Score=131.15 Aligned_cols=170 Identities=21% Similarity=0.232 Sum_probs=136.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCc----EEEEecCC-CchHHHHHHHHhCC----CcEEEEEecCCCHHHHHHHHHH
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYST----NLILSGRS-KLNSIIYKKLKKFN----NKAIYIQVDVSDKLKMISEINS 138 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~----~vil~~r~-~~~~~~~~~l~~~g----~~v~~~~~Dvtd~~~v~~~~~~ 138 (1005)
.|++||||+++|||+++|..|.+..-. ++++..|+ +..++....|.+.. .++.|+.+|+++..++.++...
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 489999999999999999999987543 45666665 56677888887653 4789999999999999999999
Q ss_pred HHhhcCCccEEEEcCcccCccc-------------h-------------hccCCHHHHHHHHhhhhhHHHHHHHHHHHHH
Q psy612 139 IINNIGPIDGVLHIAGISGLTS-------------N-------------ILEANYKNFYSVLSSKISGTIALNYALENTI 192 (1005)
Q Consensus 139 i~~~~g~idgvIh~AG~~~~~~-------------~-------------~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l 192 (1005)
+.++|.++|.|+-|||+...++ + .-.++.|++..+|++||.|.+.+.+.+.|++
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 9999999999999999754211 1 1135788899999999999999999999985
Q ss_pred HHHhcCCCcEEEEecCcccccCC---------CCChhhhHHHHHHHHHHHHHHhccc
Q psy612 193 LKLQKNKLDFVCYFSSSSAILGD---------FGSCDYAMGNRFQTVYAKYLNNKNI 240 (1005)
Q Consensus 193 ~~~~~~~~~~iV~~SSia~~~g~---------~g~~~Yaaana~l~~la~~~~~~g~ 240 (1005)
- ..+...+|..||..+.--+ .|-..|..+|..+|-|.-...+.+.
T Consensus 163 ~---~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~ 216 (341)
T KOG1478|consen 163 C---HSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK 216 (341)
T ss_pred h---cCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc
Confidence 3 2233379999999876433 4667899999999988777666654
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-11 Score=145.05 Aligned_cols=247 Identities=13% Similarity=0.024 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHhcCCC--CCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccc
Q psy612 551 QRHLLQESWLALEDAGYG--PNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~--~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taC 627 (1005)
..|+.+++.+||+|||+. +++++ +++++..... .....+..++..+|+.. +.....++|
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~~--------------~~~~~~~~la~~lGl~p~~~~~~~~GG 89 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID----SVAVVNQLSW--------------RYRDPPGLLAERLGADPARTVYSPVGG 89 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC----EEEEeccccc--------------cccCHHHHHHHHcCCCCcceeEecCCC
Confidence 568899999999999998 77776 6666643210 01123467888899864 454566788
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHH-----------------------------HHHHHcCCCC-----
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAY-----------------------------IAMTSAGMLS----- 673 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~-----------------------------~~~~~~~~ls----- 673 (1005)
+|+..+|+.|+++|++|+||++||+|++.+.+.... ......|+..
T Consensus 90 ~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~y 169 (498)
T PRK08257 90 NSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVY 169 (498)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHH
Confidence 999999999999999999999999998853211000 0000112111
Q ss_pred ------------------------------------CCC-CCcCCCCC-------CCCc------------eecCccEEE
Q psy612 674 ------------------------------------PDG-KCYVFDER-------ANGL------------VPSEAVVAV 697 (1005)
Q Consensus 674 ------------------------------------~~g-~~~pfd~~-------a~G~------------~~gEGa~~v 697 (1005)
|.- .-++++.+ .+=+ ...+|++++
T Consensus 170 al~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAv 249 (498)
T PRK08257 170 PLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAV 249 (498)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEE
Confidence 000 00122211 1111 258999999
Q ss_pred EEcccchhhcCC---CceEEEEEEeeeccCCCCCCC-CC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy612 698 VLKRLSRALSDG---DPIHAIIRGSGINYDGKTNGI-TA-PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 772 (1005)
Q Consensus 698 vLk~l~~A~~~g---~~I~avI~g~~~~~dG~~~~~-~~-p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~ 772 (1005)
||.+.+.|.+-+ ++ ...|.|++..+|...... .. ....+...+.++||++||++|+||+++|.|.+.+. .
T Consensus 250 il~S~e~A~~l~~~~~~-~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~----~ 324 (498)
T PRK08257 250 LLTSVAKARRLGVPEDR-WVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPS----A 324 (498)
T ss_pred EEeeHHHHHhcCCCCCc-eEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHH----H
Confidence 999999998766 43 355899988877532110 00 12234567999999999999999999999999875 5
Q ss_pred HHHHHHHH-hccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 773 EINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 773 E~~al~~~-~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
|+.++... |.... +.+.-+-|..++. ||+.++.|+.+++.++.+|+.+
T Consensus 325 ~~~~~E~LGl~~~g-~~pvN~sGGl~s~-G~P~~a~g~~~i~E~v~QLRg~ 373 (498)
T PRK08257 325 VQVAARELGLDLDD-PRPLTVTGGLPFF-GGPGNNYVTHAIAEMVERLRAN 373 (498)
T ss_pred HHHHHHHcCcCCCC-CCCcCCCcChhhc-CCchhhHHHHHHHHHHHHHhhc
Confidence 66666655 44332 1111123566654 9999999999999999999973
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.39 E-value=9e-12 Score=142.59 Aligned_cols=176 Identities=17% Similarity=0.131 Sum_probs=124.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+|+||.++++.|+++|.+++++.++..........+. .+.++.++.+|++|.+++.++++.. .+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----KP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence 47899999999999999999999999876666544433232222332 2345778899999999998888754 58
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------------C
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------G 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~------------g 214 (1005)
|.|||+|+... ...+.+++...+++|+.|+.++.+++.. . ...++||++||....- +
T Consensus 77 d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~----~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~ 145 (349)
T TIGR02622 77 EIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRA----I--GSVKAVVNVTSDKCYRNDEWVWGYRETDP 145 (349)
T ss_pred CEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHh----c--CCCCEEEEEechhhhCCCCCCCCCccCCC
Confidence 99999998533 1334566778899999999999998532 1 1256899999964321 1
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccc--CCceEEEEeCCcccCc
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKK--YTNKLITINWPLWNNS 259 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~--~~~~~~si~wg~w~~~ 259 (1005)
..+...|+++|.+.+.+++..+.+..... .+.+++++..+.+-+.
T Consensus 146 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp 192 (349)
T TIGR02622 146 LGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG 192 (349)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence 12356799999999999987665421100 1347788877766543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-11 Score=141.47 Aligned_cols=230 Identities=15% Similarity=0.136 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
..|+.+++.+||+++|+.+++++ .|++++...++. ....+.++...+|+.. |.+.|..+|+
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~-------------~p~~a~~v~~~lgl~~~~~~~~v~~~C~ 124 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL-------------EPATACRVHHNLGLPKSCANFDVSNACL 124 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CChHHHHHHHHcCCCCCCceeehhhhhH
Confidence 56899999999999999887765 566665432221 1135678999999974 7899999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||++|...|++|.++.+||.+++... ......+ ..+..++..+.+|+..-.++..|+|++++||.+.... ..
T Consensus 125 ~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~-~~ 200 (338)
T PRK09258 125 GFLNGMLDAANMIELGQIDYALVVSGESAR-EIVEATI--DRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLH-PR 200 (338)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEecccc-hhccchh--hhhccCccchhhhhhccceEEecccceEEEEecCCCC-CC
Confidence 999999999999999999999999999743 2211111 1223344444678888888999999999999864431 12
Q ss_pred CCceEEEEEEeeeccCCCCCCCCC-------CCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 709 GDPIHAIIRGSGINYDGKTNGITA-------PNG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~~~~~~~-------p~~--------~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
+..+ .+.....++....... .+. ....++++++|+++|++++||+|+-.|-.+.+.-+
T Consensus 201 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~--- 273 (338)
T PRK09258 201 GHRL----LGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTR--- 273 (338)
T ss_pred ccee----eeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHH---
Confidence 2233 3332222222111111 121 23345888999999999999999999987765443
Q ss_pred HHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHH
Q psy612 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~ 815 (1005)
.+.+.++-...+ .. -.++ .+||+.+|+=...|...
T Consensus 274 --~~~~~lgl~~~k---~~-~~~~-~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 274 --AILKALGIDPEK---VF-TTFP-TLGNMGPASLPITLAMA 308 (338)
T ss_pred --HHHHHhCCCHHH---ce-ehHh-hhCCcHHhHHHHHHHHH
Confidence 444555432111 12 2344 68999998765555443
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-12 Score=135.71 Aligned_cols=181 Identities=13% Similarity=0.037 Sum_probs=127.6
Q ss_pred HHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcCcccCccchhc
Q psy612 84 FSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNIL 163 (1005)
Q Consensus 84 iA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~ 163 (1005)
+|+.|+++|++++++ .|+....+ + ..+++||++|.++++++++++. ++||+||||||+.. .
T Consensus 1 ~a~~l~~~G~~Vv~~-~r~~~~~~----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~-~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGV-DRREPGMT----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG-T---- 61 (241)
T ss_pred ChHHHHhCCCEEEEE-eCCcchhh----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC-C----
Confidence 478999999866555 44432111 1 2467899999999999998874 68999999999753 2
Q ss_pred cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---------------------------CCC
Q psy612 164 EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------------------------GDF 216 (1005)
Q Consensus 164 ~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---------------------------g~~ 216 (1005)
+.|++++++|+.|++++.+.++|+|+ +.++||++||.++.. +.+
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~-----~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMA-----PGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA 132 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhcc-----CCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence 24889999999999999999999853 237899999998862 556
Q ss_pred CChhhhHHHHHHHHHHHHHH-hccccccCCceEEEEeCCcccCcccccccchhh-hHHHH--hcCC-CCCCHHHHHHHHH
Q psy612 217 GSCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFK--SSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~--~~g~-~~l~~~~~~~~l~ 291 (1005)
+...|+++|+++..|++.++ .+.. ..++++.+|.+|.. .+.|........ ..... ...+ +..++++..+.+.
T Consensus 133 ~~~~Y~~sK~a~~~~~~~la~~e~~--~~girvn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~ 209 (241)
T PRK12428 133 LATGYQLSKEALILWTMRQAQPWFG--ARGIRVNCVAPGPV-FTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLV 209 (241)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhh--ccCeEEEEeecCCc-cCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHH
Confidence 78899999999999999888 5432 34568899988866 444532211000 00010 1111 2346788887777
Q ss_pred HHHh
Q psy612 292 QLLI 295 (1005)
Q Consensus 292 ~~l~ 295 (1005)
.++.
T Consensus 210 ~l~s 213 (241)
T PRK12428 210 FLCS 213 (241)
T ss_pred HHcC
Confidence 7653
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=140.31 Aligned_cols=246 Identities=17% Similarity=0.190 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCs 628 (1005)
...++.+++.+||+++|+++++++ .+++++...++. ....+.++...+|++ .|++.|+.+|+
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~a~~l~~~lg~~~~~~~~v~~~C~ 115 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL-------------FPSTASQVQARLGIPNAAAFDINAACA 115 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CChHHHHHHHHhCCCCCcEEEECccch
Confidence 457889999999999999887765 566665432221 112567899999997 49999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||++|++.|++|.++.+||.+++..... + .++....+++.|+|++++||++.++.
T Consensus 116 ~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~~~GDgAaA~ll~~~~~~--- 174 (325)
T PRK12879 116 GFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------T-------DYTDRTTCILFGDGAGAVVLEATENE--- 174 (325)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C-------CccccCceEEEeecceEEEEEecCCC---
Confidence 99999999999999999999999999863210 1 11122345789999999999875431
Q ss_pred CCceEEEEEEee--------eccCCCCC--------CCCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 709 GDPIHAIIRGSG--------INYDGKTN--------GITAPN--------GISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 709 g~~I~avI~g~~--------~~~dG~~~--------~~~~p~--------~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
..+....-++. ....|... .....+ .....++++++|+++|++++||+|+-.|-.
T Consensus 175 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~~ 253 (325)
T PRK12879 175 -PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQA 253 (325)
T ss_pred -CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 22222111110 00001000 000111 112346789999999999999999999965
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
+.++ .+.+.+.++-... + +.. +...+||+.+|+=...|... ++.+.+.|
T Consensus 254 ~~~~-----~~~~~~~lg~~~~--~-~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~~------------------ 302 (325)
T PRK12879 254 NLRI-----IESLCEKLGIPME--K-TLV--SVEYYGNTSAATIPLALDLA---LEQGKIKP------------------ 302 (325)
T ss_pred CHHH-----HHHHHHHcCCCHH--H-hhh--hHhhhCchHHHHHHHHHHHH---HHcCCCCC------------------
Confidence 5332 4456666643221 1 222 34789999999877776544 33432211
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++-+||.|-+-..++|+
T Consensus 303 ---------------Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 303 ---------------GDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred ---------------CCEEEEEEEchhhhhEEEEEE
Confidence 123568889999998888886
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-11 Score=136.54 Aligned_cols=240 Identities=15% Similarity=0.050 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-C-Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G-PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G-ps~~v~taC 627 (1005)
...|+.|++.+||+|||+++++++ +++.+.. +..... . .....++..+|+. + |.+.++
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID----~~~~~~~--~~~~~~---------~--~~~~~~~~~~G~~~~~~~~~v~--- 83 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG----FWCSGSS--DYLAGR---------A--FSFISAIDSIGAVPPINESHVE--- 83 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcc--cccccc---------c--cchhhHHhhccCCCCCceEEec---
Confidence 357899999999999999998887 5543321 111100 0 0011234556663 3 455555
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-----------------HH-----HHHH------HHHcCCCC------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-----------------PE-----AYIA------MTSAGMLS------ 673 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-----------------~~-----~~~~------~~~~~~ls------ 673 (1005)
+++..||+.|+.+|++|+||.+||.|++.... |. .++. +.+.|.-.
T Consensus 84 ~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~v 163 (352)
T PRK07937 84 MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEV 163 (352)
T ss_pred CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 46888999999999999999999999874321 00 0000 00111100
Q ss_pred -----CCCCCcCCCCCC-------------------CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCC
Q psy612 674 -----PDGKCYVFDERA-------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 729 (1005)
Q Consensus 674 -----~~g~~~pfd~~a-------------------~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~ 729 (1005)
.++.-+|+..-+ |--.+++|++++||-+.+.|.+-+++. +.|+|++..++.....
T Consensus 164 avk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~ 242 (352)
T PRK07937 164 AARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLG 242 (352)
T ss_pred HHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcccc
Confidence 112233332221 111248999999999999998878776 8899998876653321
Q ss_pred CCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccCCCCCCceeEeccCCCcCchhhch
Q psy612 730 ITAPNGISQTELIKSVYKK-SNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAAS 807 (1005)
Q Consensus 730 ~~~p~~~~q~~~i~~al~~-agi~~~~I~yve~hgtgt~~gD~~E~~al~~~-~~~~~~~~~~~~igsvK~~iGH~~~Aa 807 (1005)
..... ....+++++++ ||++|+|||++|.|...|. .|+..++.. |... .+.-+-|..++ ||+.+|+
T Consensus 243 ~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~lGl~g~---~pvN~~GG~l~--ghp~gat 310 (352)
T PRK07937 243 ARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREALGLGDK---TKVNPSGGALA--ANPMFAA 310 (352)
T ss_pred ccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHcCCCCC---CCcCCCccchh--cCchhHH
Confidence 11111 12233445555 5999999999999999885 555544443 2111 11113477776 9999999
Q ss_pred hhHHHHHHHHHhhcC
Q psy612 808 GLVSLINLVQSIKYK 822 (1005)
Q Consensus 808 G~~~lik~~l~l~~~ 822 (1005)
|+..++.++.+|+.+
T Consensus 311 G~~~~~e~~~QL~g~ 325 (352)
T PRK07937 311 GLERIGEAARHIWDG 325 (352)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999885
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-10 Score=131.61 Aligned_cols=169 Identities=15% Similarity=0.109 Sum_probs=118.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||+|.||..+++.|+++|.+++++.++....+.....+... ..++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------- 76 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence 4789999999999999999999999987655555443333222222211 2468889999999988877765
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCC-------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDF------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~------- 216 (1005)
.+|+|||+|+... .. . .+.+...+++|+.|+.++.+++.. .....+||++||.++.. +.+
T Consensus 77 ~~d~vih~A~~~~-~~-~----~~~~~~~~~~nv~gt~~ll~~~~~------~~~v~rvV~~SS~~~~~~~~~~~~~~~~ 144 (322)
T PLN02986 77 GCDAVFHTASPVF-FT-V----KDPQTELIDPALKGTINVLNTCKE------TPSVKRVILTSSTAAVLFRQPPIEANDV 144 (322)
T ss_pred CCCEEEEeCCCcC-CC-C----CCchhhhhHHHHHHHHHHHHHHHh------cCCccEEEEecchhheecCCccCCCCCC
Confidence 4899999998643 21 1 122356789999999999988532 12356899999987542 211
Q ss_pred --------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 217 --------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 217 --------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
....|+++|...+.++....+ .++ +++++.++..-+.+
T Consensus 145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~------~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGI------DMVVLNPGFICGPL 197 (322)
T ss_pred cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCC------eEEEEcccceeCCC
Confidence 135699999999988876544 344 77888877665444
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.8e-11 Score=136.23 Aligned_cols=172 Identities=17% Similarity=0.180 Sum_probs=121.0
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++|||||+|.||..+++.|.++|..++++..|....... ..+.. .+.++.++.+|++|.+++.++++. ..+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 75 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQP 75 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence 5799999999999999999999998877666654321111 11111 234677889999999998888765 269
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc--CCCcEEEEecCccccc-----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK--NKLDFVCYFSSSSAIL----------- 213 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~--~~~~~iV~~SSia~~~----------- 213 (1005)
|.|||+||... . +.+.++++..+++|+.|+.++.+++.+.|..+.. .....||++||.+.+-
T Consensus 76 D~Vih~A~~~~-~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E 150 (355)
T PRK10217 76 DCVMHLAAESH-V----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE 150 (355)
T ss_pred CEEEECCcccC-c----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence 99999998754 1 2334567889999999999999998765332211 1235799999864211
Q ss_pred --CCCCChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCccc
Q psy612 214 --GDFGSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 214 --g~~g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~ 257 (1005)
.....+.|+.+|.+.+.+++...+ .++ +++.+..+.+-
T Consensus 151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~------~~~i~r~~~v~ 191 (355)
T PRK10217 151 TTPYAPSSPYSASKASSDHLVRAWLRTYGL------PTLITNCSNNY 191 (355)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CeEEEeeeeee
Confidence 112356799999999999987643 343 66666655443
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.6e-11 Score=135.17 Aligned_cols=170 Identities=18% Similarity=0.227 Sum_probs=117.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++|||||+|.||..++++|+++|.+++++.++..........+.. +.++.++.+|++|.+++.++++ .+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------GC 80 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------CC
Confidence 567899999999999999999999998766654433222223333322 4568899999999988877663 48
Q ss_pred cEEEEcCcccCccch-hccCCHHHH--HHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 147 DGVLHIAGISGLTSN-ILEANYKNF--YSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~-~~~~t~~~~--~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
|.|||+|+... ... ....+.+.+ ..++++|+.|+.++.+++.+. ...++||++||.+.+.+.+
T Consensus 81 d~Vih~A~~~~-~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~~ 153 (353)
T PLN02896 81 DGVFHVAASME-FDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS------KTVKRVVFTSSISTLTAKDSNGRWRA 153 (353)
T ss_pred CEEEECCcccc-CCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc------CCccEEEEEechhhccccccCCCCCC
Confidence 99999999765 221 122334443 567888999999999986432 2356899999976542110
Q ss_pred ------------------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 217 ------------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 ------------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
..+.|+.+|.+.+.++....+. ++ +++.+..+..-
T Consensus 154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lR~~~vy 207 (353)
T PLN02896 154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGI------DLVSVITTTVA 207 (353)
T ss_pred ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCC------eEEEEcCCccc
Confidence 1137999999999988776543 43 77777664443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=9e-11 Score=131.20 Aligned_cols=205 Identities=11% Similarity=0.072 Sum_probs=132.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch--HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~--~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+++++|||||+|+||+.+++.|+++|.+++++.++.... .+....+...+.++.++.+|++|.+++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------- 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------- 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence 567999999999999999999999998766655432211 11222232224468889999999988765542
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C--C----
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F--G---- 217 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~--g---- 217 (1005)
..|+|+|.++... . .+ .+++.++++|+.|++++.+++.+. ...++||++||+++.... . +
T Consensus 78 ~~d~v~~~~~~~~-~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~------~~v~riV~~SS~~a~~~~~~~~~~~~~ 144 (297)
T PLN02583 78 GCSGLFCCFDPPS-D-----YP-SYDEKMVDVEVRAAHNVLEACAQT------DTIEKVVFTSSLTAVIWRDDNISTQKD 144 (297)
T ss_pred CCCEEEEeCccCC-c-----cc-ccHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEecchHheecccccCCCCCC
Confidence 4789999775432 1 11 246789999999999999997543 134689999998775321 1 0
Q ss_pred ---------------ChhhhHHHHHHHHHHHHHH-hccccccCCceEEEEeCCcccCcccccccchhhh--HHHHhcCCC
Q psy612 218 ---------------SCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD--FYFKSSKQK 279 (1005)
Q Consensus 218 ---------------~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~--~~~~~~g~~ 279 (1005)
...|+.+|...+.++.... ..++ ++++|.++..-+.+.......... .........
T Consensus 145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi------~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T PLN02583 145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGV------NMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLV 218 (297)
T ss_pred CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCC------cEEEEcCCcccCCCCCCchhhhcCCcccCcccCcc
Confidence 0159999999998886553 3344 888888776654433211000000 000111223
Q ss_pred CCCHHHHHHHHHHHHhcc
Q psy612 280 VLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 280 ~l~~~~~~~~l~~~l~~~ 297 (1005)
.+..++.++++..++..+
T Consensus 219 ~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 219 TVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred eEEHHHHHHHHHHHhcCc
Confidence 466778888877777643
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-10 Score=133.50 Aligned_cols=164 Identities=20% Similarity=0.161 Sum_probs=118.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchH-HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~-~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+|.||..+++.|+++|.+++++.++.+... .....+...+.++.++.+|++|.+++.++++ .
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 81 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------G 81 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------c
Confidence 5789999999999999999999999987665554333211 1122333223468889999999988877764 4
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+|+... +++...+++|+.|+.++.+++.. ...++||++||.++..|.+
T Consensus 82 ~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~-------~~v~r~V~~SS~~avyg~~~~~~~~~~~ 144 (342)
T PLN02214 82 CDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAE-------AKVKRVVITSSIGAVYMDPNRDPEAVVD 144 (342)
T ss_pred CCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeccceeeeccCCCCCCcccC
Confidence 899999998642 13567899999999999998542 2456899999987665421
Q ss_pred ------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 217 ------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 217 ------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
....|+.+|...+.++..... .++ +++.+..+..-+.+
T Consensus 145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~------~~v~lRp~~vyGp~ 195 (342)
T PLN02214 145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGV------DLVVLNPVLVLGPP 195 (342)
T ss_pred cccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceECCC
Confidence 123699999999999876543 354 78888877665544
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-10 Score=136.35 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=122.8
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEec--CCC-ch-------------HHHHHHHHh-CCCcEEEEEecCC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSG--RSK-LN-------------SIIYKKLKK-FNNKAIYIQVDVS 127 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~--r~~-~~-------------~~~~~~l~~-~g~~v~~~~~Dvt 127 (1005)
-.+++++|||||+|+||+.+++.|+++|..++++.. |+. .. .+..+.+.. .+.++.++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 346788999999999999999999999987666532 211 10 011111111 2346889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC-cEEEEe
Q psy612 128 DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKL-DFVCYF 206 (1005)
Q Consensus 128 d~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~-~~iV~~ 206 (1005)
|.+.+.++++.. ++|.|||+|+... ......+.++++..+++|+.|++++.+++... .. .+||++
T Consensus 124 d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-------gv~~~~V~~ 189 (442)
T PLN02572 124 DFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-------APDCHLVKL 189 (442)
T ss_pred CHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-------CCCccEEEE
Confidence 999998888763 6899999997643 34455566778888999999999999986432 22 379999
Q ss_pred cCcccccCCC-------------------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 207 SSSSAILGDF-------------------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 207 SSia~~~g~~-------------------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
||.+. +|.+ ....|+.+|.+.+.+++.... .|+ +++.+..+..-+.|
T Consensus 190 SS~~v-YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl------~~v~lR~~~vyGp~ 262 (442)
T PLN02572 190 GTMGE-YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI------RATDLNQGVVYGVR 262 (442)
T ss_pred eccee-cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCC------CEEEEecccccCCC
Confidence 99753 2311 124699999999988876544 355 77777765554433
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.9e-11 Score=134.28 Aligned_cols=159 Identities=18% Similarity=0.114 Sum_probs=112.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHH----hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLK----KFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~----~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
+++++|||||+|+||.++++.|+++|.+++++.++.... ....+.+. ..+.++.++.+|++|.+++.++++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-- 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc--
Confidence 468899999999999999999999998766665543321 11122221 12346889999999999998888764
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 216 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----- 216 (1005)
.+|.|||+|+... .. ...+.....+++|+.|+.++.+++.+... .....-+||++||.+ .+|..
T Consensus 83 ---~~d~Vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~--~~~~~~~~v~~Ss~~-vyg~~~~~~~ 151 (340)
T PLN02653 83 ---KPDEVYNLAAQSH-VA----VSFEMPDYTADVVATGALRLLEAVRLHGQ--ETGRQIKYYQAGSSE-MYGSTPPPQS 151 (340)
T ss_pred ---CCCEEEECCcccc-hh----hhhhChhHHHHHHHHHHHHHHHHHHHhcc--ccccceeEEEeccHH-HhCCCCCCCC
Confidence 5899999999754 21 12234567788999999999999766521 111122688888753 34431
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 ------GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 ------g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+.+|.+.+.+++..+.+
T Consensus 152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 179 (340)
T PLN02653 152 ETTPFHPRSPYAVAKVAAHWYTVNYREA 179 (340)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 2457999999999999876554
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=126.77 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
..-|..+++.+||++||+++++++ -+++.+...++. ....|.+|...||+++ +.+=+.++||
T Consensus 52 ~s~la~~Aa~~AL~~Agi~~~dID----lII~aT~tpd~~-------------~Ps~A~~vq~~LG~~~~~afDl~aaCs 114 (323)
T COG0332 52 TSDLAVEAARKALEDAGISPDDID----LIIVATSTPDHL-------------FPSTACLVQARLGLGGAPAFDLQAACS 114 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCcccC-------------CChHHHHHHHHhCCCCcceeechhhhH
Confidence 457889999999999999998887 566666655433 1236889999999999 9999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
+.++||..|.+.|++|..+.+||.|.+.+ .+.+. |+.+...+.+|+|||+|||++-+ +
T Consensus 115 gf~yaL~~A~~~i~sG~~k~vLVVg~e~~-----------S~~ld-------~~dR~t~vlFgDGAgAvvl~~~~----~ 172 (323)
T COG0332 115 GFLYALSVADGLIRSGGYKNVLVVGAETL-----------SRILD-------WTDRDTCVLFGDGAGAVVLEATE----D 172 (323)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEehhHh-----------hccCC-------HhhccceEEEcCCceEEEEecCC----C
Confidence 99999999999999999999999999974 11222 23335678899999999999876 1
Q ss_pred CCceEEE-EEEeeeccCC-------------CCC-CCCCC--------CHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 709 GDPIHAI-IRGSGINYDG-------------KTN-GITAP--------NGISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 709 g~~I~av-I~g~~~~~dG-------------~~~-~~~~p--------~~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
...|+.. +..-+...+- ... +...= ....+.++++++|++++++++||||+-.|=..
T Consensus 173 ~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan 252 (323)
T COG0332 173 DNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN 252 (323)
T ss_pred CcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccccc
Confidence 1222221 1111111100 000 00000 13455688999999999999999999999433
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHH
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~l 812 (1005)
-. =++++.+.++-.. .+ . +-.+ -..|++-+||=...|
T Consensus 253 ~r-----i~~~i~~~l~~~~--~k-~-~~~~-~~yGNtsaAsiplaL 289 (323)
T COG0332 253 LR-----IIEAIAKKLGIPE--EK-V-VVTV-DKYGNTSAASIPLAL 289 (323)
T ss_pred HH-----HHHHHHHHcCCCH--HH-H-hhHH-HHhcccccchHHHHH
Confidence 22 2334444444311 11 1 1122 235888777644443
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.6e-10 Score=130.64 Aligned_cols=154 Identities=19% Similarity=0.299 Sum_probs=110.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++|||||+|+||..++++|+++|..++++.++..........+.. .+.++.++.+|++|++++.++++..
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--- 80 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--- 80 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC---
Confidence 368899999999999999999999998655554332222222222221 2346788999999999998887652
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 216 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------ 216 (1005)
.+|.|||+|+... .. .+.+++...+++|+.++.++.+++. ..+...||++||. +.+|..
T Consensus 81 --~~d~vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~Ss~-~vyg~~~~~~~~ 145 (352)
T PLN02240 81 --RFDAVIHFAGLKA-VG----ESVAKPLLYYDNNLVGTINLLEVMA-------KHGCKKLVFSSSA-TVYGQPEEVPCT 145 (352)
T ss_pred --CCCEEEEccccCC-cc----ccccCHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEEccH-HHhCCCCCCCCC
Confidence 7999999998753 21 1334567899999999999998742 2345689999996 333321
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 ------GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 ------g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+.+|.+.+.+++.....
T Consensus 146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (352)
T PLN02240 146 EEFPLSATNPYGRTKLFIEEICRDIHAS 173 (352)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3467999999999999876543
|
|
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-11 Score=104.11 Aligned_cols=67 Identities=25% Similarity=0.465 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHH
Q psy612 339 NDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYF 405 (1005)
Q Consensus 339 ~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l 405 (1005)
+.|++.|++++++++++|+++++|+++|+|||.++++..+|+++||+++++..+|++||+++|++||
T Consensus 1 e~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 1 EQLREIIAEVLGVDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp HHHHHHHHHHHTSSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred CHHHHHHHHHHCcCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 3588999999999999999999999999999999999999999999999999999999999999986
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.7e-10 Score=125.52 Aligned_cols=167 Identities=14% Similarity=0.168 Sum_probs=115.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC---CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~---g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++|||||+|.||..+++.|+++|..++++.++....... ..+... ..++.++.+|++|++++.++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 468999999999999999999999998766665544332222 222211 2468889999999888776664
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCC-C-----
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGD-F----- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~-~----- 216 (1005)
.+|.|||+|+... .. . .. .....+++|+.|+.++.+++... ....+||++||.++. .+. +
T Consensus 76 -~~d~Vih~A~~~~-~~-~--~~--~~~~~~~~nv~gt~~ll~a~~~~------~~~~~~v~~SS~~~~~y~~~~~~~~~ 142 (322)
T PLN02662 76 -GCEGVFHTASPFY-HD-V--TD--PQAELIDPAVKGTLNVLRSCAKV------PSVKRVVVTSSMAAVAYNGKPLTPDV 142 (322)
T ss_pred -CCCEEEEeCCccc-CC-C--CC--hHHHHHHHHHHHHHHHHHHHHhC------CCCCEEEEccCHHHhcCCCcCCCCCC
Confidence 4799999998643 11 1 11 12468899999999999985421 135689999998642 221 1
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCc
Q psy612 217 ---------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 217 ---------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
..+.|+.+|...+.+++...+ .++ +++.+..+.+-+.
T Consensus 143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lRp~~v~Gp 195 (322)
T PLN02662 143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGI------DMVTINPAMVIGP 195 (322)
T ss_pred cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCcccCC
Confidence 014699999999888875543 344 7788877666543
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.8e-10 Score=130.37 Aligned_cols=167 Identities=15% Similarity=0.121 Sum_probs=116.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+.+++|||||+|.||..+++.|+++|.+++++.++..........+...+ .++.++.+|++|.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 46789999999999999999999999876666554433333222222112 357889999999988877664
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----C----
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----F---- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~----~---- 216 (1005)
.+|.|||+|+... .. .. +.++..+++|+.|++++.+++.+. ....+||++||.....+. +
T Consensus 77 ~~d~ViH~A~~~~-~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~------~~~~r~v~~SS~~~~~~~~~~~~~~~E 144 (351)
T PLN02650 77 GCTGVFHVATPMD-FE---SK--DPENEVIKPTVNGMLSIMKACAKA------KTVRRIVFTSSAGTVNVEEHQKPVYDE 144 (351)
T ss_pred CCCEEEEeCCCCC-CC---CC--CchhhhhhHHHHHHHHHHHHHHhc------CCceEEEEecchhhcccCCCCCCccCc
Confidence 4899999998543 11 11 223567899999999999996542 124679999998543321 0
Q ss_pred --------------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 --------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 --------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|.+.+.+++..... ++ +++.+..+..-+
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilRp~~v~G 195 (351)
T PLN02650 145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGL------DFISIIPTLVVG 195 (351)
T ss_pred ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCC------eEEEECCCceEC
Confidence 1136999999999998776543 44 777776654433
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.3e-10 Score=128.30 Aligned_cols=219 Identities=20% Similarity=0.261 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC-CCCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~Gps~~v~taCs 628 (1005)
...++.+++.+||+++|+++++++ .|++|.....+. ....+.+++..+|+ ..|.+.|+.+|+
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~~~~i~~~lg~~~~~~~~v~~~C~ 110 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK-------------GKSAATYLAELLGLTNAEAFDLKQACY 110 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CccHHHHHHHHcCCCCCceeehhhhhH
Confidence 357889999999999999888776 677776543221 12356789999999 569999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||..|++.|++|.++.+||+|++....... +.+.++++.|+|+++++|++.++..
T Consensus 111 s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~~~~~-- 169 (324)
T cd00827 111 GGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRNPGIL-- 169 (324)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecCcccc--
Confidence 9999999999999999999999999997432210 3456889999999999999765431
Q ss_pred CCceEEEEEEeeecc--------CCC-CC--------CCCCC---------CHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 709 GDPIHAIIRGSGINY--------DGK-TN--------GITAP---------NGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 709 g~~I~avI~g~~~~~--------dG~-~~--------~~~~p---------~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
+..|......+.... ++. .. .+... .......+++++|+++|++ +||+|+-.|
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h 248 (324)
T cd00827 170 AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPH 248 (324)
T ss_pred cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-cccceeecc
Confidence 123333222211100 000 00 01011 0234567889999999999 999999999
Q ss_pred CCCC-CCCCHHHHHHHHHHhccCCCCCCceeEe--ccCCCcCchhhchhhHHHHHH
Q psy612 763 GTGT-KLGDPVEINALHDVFKNKTYNQKFCAIT--SNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 763 gtgt-~~gD~~E~~al~~~~~~~~~~~~~~~ig--svK~~iGH~~~AaG~~~lik~ 815 (1005)
-.+- ..-+. +.+.++-.. ..+... .+-..+||+.+|+=...|-..
T Consensus 249 ~~~~~~~~~~-----~~~~l~~~~---~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 249 QPNGKKILEA-----VAKKLGGPP---EKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred CchHHHHHHH-----HHHHccchH---hhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 7765 32222 222222110 001111 245678999998866555544
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.8e-10 Score=127.72 Aligned_cols=165 Identities=20% Similarity=0.167 Sum_probs=114.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHH--HHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIY--KKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~--~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+|.||..++++|+++|.+++++.++........ ..+... .++.++.+|++|.+++.++++ .
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~ 80 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL-GDLKIFGADLTDEESFEAPIA-------G 80 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC-CceEEEEcCCCChHHHHHHHh-------c
Confidence 688999999999999999999999987655554433222211 112111 257889999999988776653 4
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 215 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~---------- 215 (1005)
+|.|||+|+... . .. .+.+...+++|+.|+.++.+++.+. ...++||++||.+.+.+.
T Consensus 81 ~d~vih~A~~~~-~---~~--~~~~~~~~~~nv~g~~~ll~a~~~~------~~~~~~v~~SS~~~~g~~~~~~~~~~~~ 148 (338)
T PLN00198 81 CDLVFHVATPVN-F---AS--EDPENDMIKPAIQGVHNVLKACAKA------KSVKRVILTSSAAAVSINKLSGTGLVMN 148 (338)
T ss_pred CCEEEEeCCCCc-c---CC--CChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeecceeeeccCCCCCCceec
Confidence 899999998532 1 11 1234567899999999999986431 235689999998654311
Q ss_pred --------------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 216 --------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 --------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
+....|+.+|.+.+.+++..... ++ +++.+..+..-+
T Consensus 149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~~R~~~vyG 200 (338)
T PLN00198 149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNI------DLITVIPTLMAG 200 (338)
T ss_pred cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCc------eEEEEeCCceEC
Confidence 12346999999999998875543 44 777777655543
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.1e-10 Score=125.15 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..++.+++.+||+++|+++++++ .|++|+...++. .+ .+.++...+++++ |++.|..+|+|
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId----~vi~~s~~~~~~---------~~-----~~~~v~~~Lg~~~~~~~~v~~~Cas 113 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEID----LIILATSTPDDL---------FG-----SASQLQAEIGATRAVAFDITAACSG 113 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC---------Cc-----hHHHHHHHhCCCCCceeeecccchh
Confidence 67889999999999999887775 566665433211 01 2346888889876 77899999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||+.|.+.|++|.++.+||.|++.+. .. + .++...+.++.|+|++++||++-..
T Consensus 114 g~~al~~A~~~i~sg~~~~~Lvv~~e~~s-~~----------~-------~~~~~~~~~~fgDga~A~ll~~~~~----- 170 (326)
T CHL00203 114 FILALVTATQFIQNGSYKNILVVGADTLS-KW----------I-------DWSDRKTCILFGDGAGAAIIGASYE----- 170 (326)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhh-Cc----------C-------CcccCCceEEEcceeeEEEEEEcCC-----
Confidence 99999999999999999999999998631 11 1 1122235688999999999986332
Q ss_pred CceEEEEEEeeeccCCCC----------------CCCCCCC---------H--------HHHHHHHHHHHHHcCCCCCCc
Q psy612 710 DPIHAIIRGSGINYDGKT----------------NGITAPN---------G--------ISQTELIKSVYKKSNLNPEDI 756 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~~----------------~~~~~p~---------~--------~~q~~~i~~al~~agi~~~~I 756 (1005)
..|.+ +....||+. .....|+ + ....++++++|+++|++++||
T Consensus 171 ~~~~~----~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~~di 246 (326)
T CHL00203 171 NSILG----FKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISIDEV 246 (326)
T ss_pred CCeEE----EEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 12222 111222210 0001111 0 123356899999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccc
Q psy612 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 836 (1005)
Q Consensus 757 ~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~ 836 (1005)
+++-.|-.+.+. ++++.+.++-...+ +. -.+ ...||+.+|+=...|-.+ ++++.+.|
T Consensus 247 d~~~~hq~~~~~-----~~~~~~~lgl~~~k---~~-~~l-~~~Gn~~sasi~~~L~~~---~~~g~~~~---------- 303 (326)
T CHL00203 247 DWFILHQANKRI-----LEAIANRLSVPNSK---MI-TNL-EKYGNTSAASIPLALDEA---IQNNKIQP---------- 303 (326)
T ss_pred CEEEECCCCHHH-----HHHHHHHhCCCHHH---hh-hHH-HhhCcHHHHHHHHHHHHH---HHhCCCCC----------
Confidence 999999776543 34455555532211 11 123 578999998766655444 34443322
Q ss_pred cccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 837 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 837 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+..+-+||.|=+-..++++
T Consensus 304 -----------------------Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 304 -----------------------GQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred -----------------------CCEEEEEEEchhhhheEEEEE
Confidence 134567889988887888775
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.7e-10 Score=127.85 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=117.1
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+|||||+|.||..+++.|+++|...++...+...... ...+... +.++.++.+|++|.+++.+++++ ..+|
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAELDRIFAQ-----HQPD 75 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHh-----cCCC
Confidence 48999999999999999999999876665554321111 1112211 34577889999999999888865 2699
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC--CCcEEEEecCcccccCC----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--KLDFVCYFSSSSAILGD---------- 215 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~--~~~~iV~~SSia~~~g~---------- 215 (1005)
.|||+||... .. ...+..+..+++|+.|+.++.+++.++|++.+.. ....||++||.+.. |.
T Consensus 76 ~vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy-g~~~~~~~~~~~ 149 (352)
T PRK10084 76 AVMHLAAESH-VD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY-GDLPHPDEVENS 149 (352)
T ss_pred EEEECCcccC-Cc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc-CCCCcccccccc
Confidence 9999998754 21 1122346689999999999999987765332211 23479999986432 21
Q ss_pred ------------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 216 ------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 216 ------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
.....|+.+|.+.+.+++...+. +. +.+.+..+..
T Consensus 150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~vilr~~~v 197 (352)
T PRK10084 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGL------PTIVTNCSNN 197 (352)
T ss_pred ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeccce
Confidence 12358999999999999876543 43 6666665443
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-09 Score=119.51 Aligned_cols=172 Identities=20% Similarity=0.187 Sum_probs=128.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHH--HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI--IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~--~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++|+||||+|=||..+++.|+++|..+...+++.+..+. ...+|+..+.+...+.+|++|++++.++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence 57899999999999999999999999987766666554322 345555555678999999999999887775
Q ss_pred CccEEEEcCcccCccchhccCCHHHHH-HHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C--C---
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFY-SVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F--G--- 217 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~-~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~--g--- 217 (1005)
..|+|||.|.... . ...+ .+ +.+++.+.|+.++.+++.. .....+||+.||++++..+ + +
T Consensus 78 gcdgVfH~Asp~~-~---~~~~---~e~~li~pav~Gt~nVL~ac~~------~~sVkrvV~TSS~aAv~~~~~~~~~~~ 144 (327)
T KOG1502|consen 78 GCDGVFHTASPVD-F---DLED---PEKELIDPAVKGTKNVLEACKK------TKSVKRVVYTSSTAAVRYNGPNIGENS 144 (327)
T ss_pred CCCEEEEeCccCC-C---CCCC---cHHhhhhHHHHHHHHHHHHHhc------cCCcceEEEeccHHHhccCCcCCCCCc
Confidence 4899999997544 1 1111 23 6899999999999999743 2257889999999998765 1 1
Q ss_pred ----------------ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc
Q psy612 218 ----------------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 263 (1005)
Q Consensus 218 ----------------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~ 263 (1005)
...|+.+|..-+.-|-....++ +...++|+++..-+-++..
T Consensus 145 vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~-----~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 145 VVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN-----GLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred ccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-----CccEEEecCCceECCCccc
Confidence 1248888877776665555543 3488999999887766654
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.1e-10 Score=127.12 Aligned_cols=246 Identities=18% Similarity=0.253 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
..-|..+++.+||+++|++++++. -+++++...++. . -.+..+...+|+++ |++.|..+|+
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId----~li~~s~~~~~~---------~-----~~a~~v~~~LG~~~~~~~dv~~~Ca 157 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVD----LVLLCTSSPDDL---------F-----GSAPQVQAALGCTNALAFDLTAACS 157 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcc---------C-----cHHHHHHHHhCCCCCceeeccccch
Confidence 467899999999999999877664 345554332211 0 13557888999976 6788999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||++|.+.|++|.++.+||+|++.... .+ .|+...+.+++|+|++++||++.+...
T Consensus 158 ~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~-----------~~-------~~~d~~~~~lfGDGAaAvlL~~~~~~~-- 217 (379)
T PLN02326 158 GFVLGLVTAARFIRGGGYKNVLVIGADALSR-----------YV-------DWTDRGTCILFGDGAGAVVLQACDDDE-- 217 (379)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEechhcC-----------CC-------CccccCceEEEcceeEEEEEEEcCCCC--
Confidence 9999999999999999999999999986321 11 122344567899999999999754321
Q ss_pred CCceEEE-EEEee-------eccCCC--------C----------CCC--CCCCH--------HHHHHHHHHHHHHcCCC
Q psy612 709 GDPIHAI-IRGSG-------INYDGK--------T----------NGI--TAPNG--------ISQTELIKSVYKKSNLN 752 (1005)
Q Consensus 709 g~~I~av-I~g~~-------~~~dG~--------~----------~~~--~~p~~--------~~q~~~i~~al~~agi~ 752 (1005)
..+... +...+ +.+.|. . .++ ..-++ ....++++++|+++|++
T Consensus 218 -~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~ 296 (379)
T PLN02326 218 -DGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLT 296 (379)
T ss_pred -CceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 122221 11000 000110 0 000 00011 11235788999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCC
Q psy612 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 832 (1005)
Q Consensus 753 ~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 832 (1005)
++||+|+-.|-.+-.+ ++.+.+.++-... .+. -.+ ..+||+.+|+=...|-..+ +.+.+-
T Consensus 297 ~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~e---k~~-~~l-~~~GNt~sAsi~~~L~~~~---~~g~~~------- 356 (379)
T PLN02326 297 AESIDWLLLHQANQRI-----IDAVAQRLGIPPE---KVI-SNL-ANYGNTSAASIPLALDEAV---RSGKVK------- 356 (379)
T ss_pred HHHCCEEEECCCCHHH-----HHHHHHHcCCCHH---Hee-ecH-hhcCcHHHHHHHHHHHHHH---HcCCCC-------
Confidence 9999999999775543 2335555543211 122 234 5789999988666554442 222110
Q ss_pred cccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 833 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 833 ~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+..+..+.+||.|-+-..++|+
T Consensus 357 --------------------------~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 357 --------------------------KGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred --------------------------CCCEEEEEEEChhheeeEEEEE
Confidence 1134578889999998888875
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.3e-10 Score=125.63 Aligned_cols=166 Identities=16% Similarity=0.231 Sum_probs=115.4
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|.||..+++.|+++|.+++++.++.....+....+...+ .+.++.+|+++.+++.++++. +++|+||
T Consensus 2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv 75 (328)
T TIGR01179 2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKIDAVI 75 (328)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence 7999999999999999999999876554322222222222222222 577889999999999888763 4799999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------CC
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------GS 218 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------g~ 218 (1005)
||||... ... +.++....+..|+.++.++.+++. +.+..+||++||... +|.. ..
T Consensus 76 ~~ag~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~ss~~~-~g~~~~~~~~e~~~~~~~ 142 (328)
T TIGR01179 76 HFAGLIA-VGE----SVQDPLKYYRNNVVNTLNLLEAMQ-------QTGVKKFIFSSSAAV-YGEPSSIPISEDSPLGPI 142 (328)
T ss_pred ECccccC-cch----hhcCchhhhhhhHHHHHHHHHHHH-------hcCCCEEEEecchhh-cCCCCCCCccccCCCCCC
Confidence 9999754 221 223445678899999999988743 234568998888643 3332 23
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
..|+.+|+.++.+.+....+. .+.+++.+.++.+-+.
T Consensus 143 ~~y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 143 NPYGRSKLMSERILRDLSKAD----PGLSYVILRYFNVAGA 179 (328)
T ss_pred CchHHHHHHHHHHHHHHHHhc----cCCCEEEEecCcccCC
Confidence 679999999999888765431 1237788887666543
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=8e-10 Score=126.89 Aligned_cols=171 Identities=18% Similarity=0.216 Sum_probs=136.2
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
+-.+|+++||||+|.||.++++++++.+.+.+++.+|++.. .....+++.. ..+..++-+||.|.+.+..+++..
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-- 324 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-- 324 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence 44799999999999999999999999999999999998754 3455566653 357888899999999998888653
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|.|+|+|..-+ -|+.+..+ .+.+.+|+.|+.|+.+++.. .+...||++|+--+..+ -..|
T Consensus 325 ---kvd~VfHAAA~KH--VPl~E~nP---~Eai~tNV~GT~nv~~aa~~-------~~V~~~V~iSTDKAV~P---tNvm 386 (588)
T COG1086 325 ---KVDIVFHAAALKH--VPLVEYNP---EEAIKTNVLGTENVAEAAIK-------NGVKKFVLISTDKAVNP---TNVM 386 (588)
T ss_pred ---CCceEEEhhhhcc--CcchhcCH---HHHHHHhhHhHHHHHHHHHH-------hCCCEEEEEecCcccCC---chHh
Confidence 7999999997644 45555544 46889999999999999654 36788999999877764 3679
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+++|...+-+.++.+.... +.+++..++-.|..-
T Consensus 387 GaTKr~aE~~~~a~~~~~~--~~~T~f~~VRFGNVl 420 (588)
T COG1086 387 GATKRLAEKLFQAANRNVS--GTGTRFCVVRFGNVL 420 (588)
T ss_pred hHHHHHHHHHHHHHhhccC--CCCcEEEEEEeccee
Confidence 9999999999988876432 114678888887663
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.2e-10 Score=127.09 Aligned_cols=155 Identities=18% Similarity=0.115 Sum_probs=107.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~-----~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
|++|||||+|.||..+++.|+++|.+++++.++.... ......+.. .+..+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 5899999999999999999999998766665443311 111122211 1345888999999999998888764
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
++|.|||+|+... ... ..+.-...+++|+.|+.++.+++.+. .-.+...||++||.+- +|.
T Consensus 78 --~~d~ViH~Aa~~~-~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~----~~~~~~~~v~~SS~~v-yg~~~~~~~~ 145 (343)
T TIGR01472 78 --KPTEIYNLAAQSH-VKV----SFEIPEYTADVDGIGTLRLLEAVRTL----GLIKSVKFYQASTSEL-YGKVQEIPQN 145 (343)
T ss_pred --CCCEEEECCcccc-cch----hhhChHHHHHHHHHHHHHHHHHHHHh----CCCcCeeEEEeccHHh-hCCCCCCCCC
Confidence 5899999999754 211 11122456778999999999987542 1011236888888642 332
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHhc
Q psy612 216 -----FGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 216 -----~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
...+.|+++|.+.+.+++..+++
T Consensus 146 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 173 (343)
T TIGR01472 146 ETTPFYPRSPYAAAKLYAHWITVNYREA 173 (343)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 13467999999999999877554
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.9e-09 Score=118.29 Aligned_cols=241 Identities=17% Similarity=0.156 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeec-cCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE-EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~-~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taC 627 (1005)
..-++.+++.+||+++|+++++++ .+++..+ ..++. . ...+.++...+|+++ |++.|..+|
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~~--------~-----p~~a~~l~~~lGl~~~~~~~v~~~C 115 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAID----VVIYIGSEHKDYP--------V-----WSSAPKIQHEIGAKNAWAFDIMAVC 115 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCCC--------C-----CchHHHHHHHhCCCCcccccccccc
Confidence 467889999999999999887765 4433322 21110 0 123578899999976 888899999
Q ss_pred hhHHHHHHHHHHHHhc-CCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCc--eecCccEEEEEcccch
Q psy612 628 SSSLVATHIACQSLRQ-HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGL--VPSEAVVAVVLKRLSR 704 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~-G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~--~~gEGa~~vvLk~l~~ 704 (1005)
++++.||..|++.|++ |.++.+||.+.+.... .+. |+....++ ..|+|++++||++...
T Consensus 116 ~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~-----------~~~-------~~~~~~~~~~~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 116 ASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD-----------LVD-------YDNPRTRFMFNFAAGGSAALLKKDAG 177 (339)
T ss_pred hHHHHHHHHHHHHHhcCCCccEEEEEeeccccc-----------ccC-------cCCCCeeeeccCCCceeEEEEEecCC
Confidence 9999999999999999 9999999888764211 011 11112332 3699999999986432
Q ss_pred hhcCCCceEEEEEEeeeccCCC------------CCC--------------CCCCCH----------HHHHHHHHHHHHH
Q psy612 705 ALSDGDPIHAIIRGSGINYDGK------------TNG--------------ITAPNG----------ISQTELIKSVYKK 748 (1005)
Q Consensus 705 A~~~g~~I~avI~g~~~~~dG~------------~~~--------------~~~p~~----------~~q~~~i~~al~~ 748 (1005)
+.+|. ++...+|+. ... ...|+. ....++++++|++
T Consensus 178 ----~~~il----~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 249 (339)
T PRK06840 178 ----KNRIL----GSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRK 249 (339)
T ss_pred ----CCceE----EEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 22333 222222221 000 000110 1234789999999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCC
Q psy612 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 828 (1005)
Q Consensus 749 agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~ 828 (1005)
+|++++||+++-.|=.+... ++.+.+.++-... ... +...+||+.+|+=...|...+ +.+.+.|
T Consensus 250 ~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~---~~~---~~~~~Gn~~sas~~~~L~~~~---~~~~~~~-- 313 (339)
T PRK06840 250 SGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEE---QAI---YLDEYGHLGQLDQILSLHLAL---EQGKLKD-- 313 (339)
T ss_pred cCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHH---HeE---eHHhccchhhhhHHHHHHHHH---HcCCCCC--
Confidence 99999999998776544332 2345555543211 122 245889999887665554332 2221111
Q ss_pred CCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 829 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 829 ~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++.+||.|.+-..++|+
T Consensus 314 -------------------------------Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 314 -------------------------------GDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred -------------------------------CCEEEEEEEehhhheeEEEEE
Confidence 124578899999999999987
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.9e-09 Score=122.77 Aligned_cols=151 Identities=17% Similarity=0.311 Sum_probs=108.0
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
.+|||||+|.||..+++.|+++|.+++++.++..........+... +.++.++.+|++|.+.+.++++. .++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT 76 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence 5899999999999999999999987766644333222222233332 34577889999999988887753 36999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------- 215 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------------- 215 (1005)
|||+||... ... ..+.....+.+|+.++.++.+++ +..+...||++||... +|.
T Consensus 77 vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~-------~~~~~~~~v~~Ss~~~-yg~~~~~~~~E~~~~~ 143 (338)
T PRK10675 77 VIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAM-------RAANVKNLIFSSSATV-YGDQPKIPYVESFPTG 143 (338)
T ss_pred EEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHH-------HHcCCCEEEEeccHHh-hCCCCCCccccccCCC
Confidence 999998754 221 12234567899999999998874 2334567999999643 221
Q ss_pred CCChhhhHHHHHHHHHHHHHHhc
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
.....|+.+|.+.+.+++...+.
T Consensus 144 ~p~~~Y~~sK~~~E~~~~~~~~~ 166 (338)
T PRK10675 144 TPQSPYGKSKLMVEQILTDLQKA 166 (338)
T ss_pred CCCChhHHHHHHHHHHHHHHHHh
Confidence 13578999999999999887543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.5e-10 Score=121.11 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=114.7
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhC--CCcE----EEEEecCCCHHHHHHHHHHHHhhc
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF--NNKA----IYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~--g~~v----~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+|||||+|.||.+++++|++.+.+.|++.++++. .-++..+++.. +.++ ..+-+|++|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 6999999999999999999999999999999863 34455556422 2223 35578999999888777542
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
++|+|||+|..-+ -++.+..+ .+.+.+|+.|+.++.+++.. .....||++|+--+..+ ...|++
T Consensus 77 -~pdiVfHaAA~Kh--Vpl~E~~p---~eav~tNv~GT~nv~~aa~~-------~~v~~~v~ISTDKAv~P---tnvmGa 140 (293)
T PF02719_consen 77 -KPDIVFHAAALKH--VPLMEDNP---FEAVKTNVLGTQNVAEAAIE-------HGVERFVFISTDKAVNP---TNVMGA 140 (293)
T ss_dssp -T-SEEEE--------HHHHCCCH---HHHHHHHCHHHHHHHHHHHH-------TT-SEEEEEEECGCSS-----SHHHH
T ss_pred -CCCEEEEChhcCC--CChHHhCH---HHHHHHHHHHHHHHHHHHHH-------cCCCEEEEccccccCCC---CcHHHH
Confidence 7999999997643 45555544 56799999999999999654 36788999999877653 377999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+|...+.+....+.... +..++..++-.|..-
T Consensus 141 tKrlaE~l~~~~~~~~~--~~~t~f~~VRFGNVl 172 (293)
T PF02719_consen 141 TKRLAEKLVQAANQYSG--NSDTKFSSVRFGNVL 172 (293)
T ss_dssp HHHHHHHHHHHHCCTSS--SS--EEEEEEE-EET
T ss_pred HHHHHHHHHHHHhhhCC--CCCcEEEEEEeccee
Confidence 99999999988876642 334678888887654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-09 Score=113.90 Aligned_cols=146 Identities=21% Similarity=0.273 Sum_probs=110.5
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||.|=||..++..|++.|..++|+..-+....+....++ +.++..|+.|.+.+.+++++- .||.|
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~idaV 71 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDAV 71 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence 68999999999999999999999999888766544444433322 578999999998888887653 79999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC-----------
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS----------- 218 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~----------- 218 (1005)
||.||... -+. +.+.=.+-++.|+.|++.|.+++ .+.....| .|||.++.+|.|..
T Consensus 72 iHFAa~~~-VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am-------~~~gv~~~-vFSStAavYG~p~~~PI~E~~~~~p 138 (329)
T COG1087 72 VHFAASIS-VGE----SVQNPLKYYDNNVVGTLNLIEAM-------LQTGVKKF-IFSSTAAVYGEPTTSPISETSPLAP 138 (329)
T ss_pred EECccccc-cch----hhhCHHHHHhhchHhHHHHHHHH-------HHhCCCEE-EEecchhhcCCCCCcccCCCCCCCC
Confidence 99999755 222 22333457899999999999994 33344455 46788888887653
Q ss_pred -hhhhHHHHHHHHHHHHHHhc
Q psy612 219 -CDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 219 -~~Yaaana~l~~la~~~~~~ 238 (1005)
..|+.+|...+.+-+.....
T Consensus 139 ~NPYG~sKlm~E~iL~d~~~a 159 (329)
T COG1087 139 INPYGRSKLMSEEILRDAAKA 159 (329)
T ss_pred CCcchhHHHHHHHHHHHHHHh
Confidence 46999999999877765443
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.8e-09 Score=119.06 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=114.7
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC------CCcEEEEEecCCCHHHHHHHHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF------NNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~------g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
..++++|||||+|+||..+++.|+++|..++++.++.+..+.+ +.+... ...+.++.+|++|.+++.++++.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~- 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG- 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh-
Confidence 4678999999999999999999999998766655443322222 233221 12578899999999988877753
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCC---
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGD--- 215 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~-~~g~--- 215 (1005)
+|.|||.|+... ....... .....++|+.|+.++.+++.. ......||++||.++ .+|.
T Consensus 129 ------~d~V~hlA~~~~-~~~~~~~----~~~~~~~nv~gt~~llea~~~------~~~v~r~V~~SS~~~~vyg~~~~ 191 (367)
T PLN02686 129 ------CAGVFHTSAFVD-PAGLSGY----TKSMAELEAKASENVIEACVR------TESVRKCVFTSSLLACVWRQNYP 191 (367)
T ss_pred ------ccEEEecCeeec-ccccccc----cchhhhhhHHHHHHHHHHHHh------cCCccEEEEeccHHHhcccccCC
Confidence 688999998754 2111111 123456789999999988532 123568999999742 2221
Q ss_pred ---C----------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 216 ---F----------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 216 ---~----------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
+ ....|+.+|.+.+.+++.... .++ ++++|.++..-+.|
T Consensus 192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl------~~v~lRp~~vyGp~ 250 (367)
T PLN02686 192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGL------KLATICPALVTGPG 250 (367)
T ss_pred CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCc------eEEEEcCCceECCC
Confidence 0 124699999999999876543 344 88888876655544
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.9e-09 Score=117.79 Aligned_cols=164 Identities=16% Similarity=0.179 Sum_probs=110.7
Q ss_pred EEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~--~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++||||+|+||.+++++|+++|. ..|++..|... ..+..+.+.. ...+.++.+|++|++++.++++.. .+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence 379999999999999999999873 34555544221 1111222221 235778899999999998887653 59
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 215 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~----------- 215 (1005)
|.|||+|+... . +.+.+.++..+++|+.|+.++.+++... .....+|++||....-+.
T Consensus 75 d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~ 143 (317)
T TIGR01181 75 DAVVHFAAESH-V----DRSISGPAAFIETNVVGTYTLLEAVRKY------WHEFRFHHISTDEVYGDLEKGDAFTETTP 143 (317)
T ss_pred CEEEEcccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHhc------CCCceEEEeeccceeCCCCCCCCcCCCCC
Confidence 99999998754 2 2233456778999999999999886432 112368999985422110
Q ss_pred -CCChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcc
Q psy612 216 -FGSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 216 -~g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w 256 (1005)
.....|+.+|...+.+++.... .++ +++.+..+..
T Consensus 144 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~i~R~~~i 180 (317)
T TIGR01181 144 LAPSSPYSASKAASDHLVRAYHRTYGL------PALITRCSNN 180 (317)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhCC------CeEEEEeccc
Confidence 1234699999999999887543 333 6666665533
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-08 Score=116.49 Aligned_cols=239 Identities=15% Similarity=0.163 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
...|.++++.+||+|||+++++++ ++++++...++.. ...+..+...+|++. |.+.|..+|
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~~-------------p~~a~~v~~~LGl~~~~~~~dv~~aC 112 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYAV-------------KPTATIVAEAIGATPDLTAADLEFAC 112 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc-------------cchHHHHHHHcCCCCCceEEEHHHhH
Confidence 368899999999999999988876 5666654332211 113567889999863 788899999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
++++.||+.|...|++|.++.+||.+.+.... .++.. -=+..|+|++++||++-..
T Consensus 113 ~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~~~~~--------~~~~~GDGAaA~vl~~~~~--- 168 (345)
T TIGR00748 113 KAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------APGDA--------LEYTAGAGGAAYIIGEKNT--- 168 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------CCCcc--------CcccCCCceEEEEEccCCc---
Confidence 99999999999999999999999999986420 11111 1145699999999985321
Q ss_pred CCCceEEEEEEee-eccCCC----CCCCCCC--------CHH---HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy612 708 DGDPIHAIIRGSG-INYDGK----TNGITAP--------NGI---SQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771 (1005)
Q Consensus 708 ~g~~I~avI~g~~-~~~dG~----~~~~~~p--------~~~---~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~ 771 (1005)
.+.+.+.. ...|+. ..+...| ... .-..+++++|+++|++++||+|+-.|=.+-.+
T Consensus 169 -----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~--- 240 (345)
T TIGR00748 169 -----VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKF--- 240 (345)
T ss_pred -----ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHH---
Confidence 11222221 111110 0000001 011 11267789999999999999999999554332
Q ss_pred HHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccc
Q psy612 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 851 (1005)
Q Consensus 772 ~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~ 851 (1005)
.+.+.+.++-... .+...-.=..+||+.+|+=...|...+ + .+.
T Consensus 241 --~~~~~~~lgl~~e---k~~~~~~~~~~GNt~sAsipl~L~~~~---~--~~~-------------------------- 284 (345)
T TIGR00748 241 --YLVAARMLGFPKE---QVKPGLLTPRIGNTYSGATPVGLSAVL---D--IAE-------------------------- 284 (345)
T ss_pred --HHHHHHHcCCCHH---HeeccccccccCchhhhHHHHHHHHHH---H--hcC--------------------------
Confidence 2234444442111 122211114689999998776665543 1 010
Q ss_pred cccccccCccEEEEcccCCCCceEEEEEe
Q psy612 852 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 852 ~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+..+.+..+||.|-+-+.++++
T Consensus 285 -------~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 285 -------PGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred -------CCCEEEEEEecCCcceeEEEEE
Confidence 0124578899999999888885
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.5e-09 Score=112.78 Aligned_cols=203 Identities=17% Similarity=0.097 Sum_probs=116.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCH-HHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK-LKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~-~~v~~~~~~i~~~~g~ 145 (1005)
+.+++|||||+|+||+.+++.|+++|..++++. |+.. ...+.+. .+..+.++.+|++|. +++. +.+. ..
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~-R~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~l~---~~~~---~~ 85 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGV-RDVD--KAKTSLP-QDPSLQIVRADVTEGSDKLV---EAIG---DD 85 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEe-cCHH--HHHHhcc-cCCceEEEEeeCCCCHHHHH---HHhh---cC
Confidence 357899999999999999999999987655554 4431 1111111 234688899999983 3222 2221 26
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---CCCCChhhh
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---GDFGSCDYA 222 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---g~~g~~~Ya 222 (1005)
+|.|||++|......+. ..+.+|+.|+.++.+++ ...+.++||++||+...- +.+....|.
T Consensus 86 ~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~-------~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~ 149 (251)
T PLN00141 86 SDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEAC-------RKAGVTRFILVSSILVNGAAMGQILNPAYI 149 (251)
T ss_pred CCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHH-------HHcCCCEEEEEccccccCCCcccccCcchh
Confidence 99999999874311111 12357788888888884 233567899999986321 122234466
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+.|.+...+...+..+-.....+++++.|.++...+..+. ........ ...-...++.++..+.+..++..+.
T Consensus 150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~-~~~~~~~~--~~~~~~~i~~~dvA~~~~~~~~~~~ 222 (251)
T PLN00141 150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT-GNIVMEPE--DTLYEGSISRDQVAEVAVEALLCPE 222 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC-ceEEECCC--CccccCcccHHHHHHHHHHHhcChh
Confidence 6665444332222111100122347888887755443221 11000000 0000135889999999988886654
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.5e-09 Score=118.89 Aligned_cols=154 Identities=16% Similarity=0.140 Sum_probs=109.3
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+++||||+|.||..+++.|+++|..++++.++.+... .+. ...+.++.+|++|.+++.++++ .+|+|
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~v 68 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR----NLE--GLDVEIVEGDLRDPASLRKAVA-------GCRAL 68 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc----ccc--cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 6899999999999999999999976555544333211 121 2247789999999988877664 47999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-C-----------
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-G----------- 217 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g----------- 217 (1005)
||+|+... . ..+.++..+++|+.++.++.+++.. ...++||++||.+...... +
T Consensus 69 i~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~ 134 (328)
T TIGR03466 69 FHVAADYR-L------WAPDPEEMYAANVEGTRNLLRAALE-------AGVERVVYTSSVATLGVRGDGTPADETTPSSL 134 (328)
T ss_pred EEeceecc-c------CCCCHHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEechhhcCcCCCCCCcCccCCCCc
Confidence 99997532 1 1123567888999999999988542 2456899999976543211 1
Q ss_pred ---ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 218 ---SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 218 ---~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
...|+.+|.+.+.+.+..... ++ +++.+..+..
T Consensus 135 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~ilR~~~~ 171 (328)
T TIGR03466 135 DDMIGHYKRSKFLAEQAALEMAAEKGL------PVVIVNPSTP 171 (328)
T ss_pred ccccChHHHHHHHHHHHHHHHHHhcCC------CEEEEeCCcc
Confidence 347999999999998876554 33 6777766544
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-08 Score=115.41 Aligned_cols=212 Identities=17% Similarity=0.203 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
...|+.+++.+||+|||+.+++++ .+++++....+.. ...+.++...+|+++ |.+.+..+|
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~~-------------p~~a~~v~~~Lgl~~~~~~~dv~~~C 113 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYAV-------------KPTATIVAEALGATPDLTAADLEFAC 113 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc-------------ccHHHHHHHHcCCCCCceEEEHHHhH
Confidence 367899999999999999888776 5666654332210 113457888999975 678899999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
++++.||+.|...|++|.++.+||.+++.... .++.. + =+..|+|++++||.+.+.
T Consensus 114 ~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~~~---~-----~~~~GDGA~A~ll~~~~~--- 169 (347)
T PRK04262 114 KAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APGDA---L-----EYTAAAGGAAFIIGKEEV--- 169 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCCCC---C-----CCcCCCCcEEEEEecCcc---
Confidence 99999999999999999999999999886210 11111 1 123499999999985221
Q ss_pred CCCceEEEEEEee-eccCCCC----CCCCCC----------C-HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy612 708 DGDPIHAIIRGSG-INYDGKT----NGITAP----------N-GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771 (1005)
Q Consensus 708 ~g~~I~avI~g~~-~~~dG~~----~~~~~p----------~-~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~ 771 (1005)
. +.|.++. ...|+.. .+...| . .....++++++|+++|++++||+|+-.|-.+..+-+
T Consensus 170 -~----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~- 243 (347)
T PRK04262 170 -I----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPL- 243 (347)
T ss_pred -c----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHH-
Confidence 1 2233321 1112110 000001 1 124457889999999999999999999955544333
Q ss_pred HHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHH
Q psy612 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 772 ~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~ 815 (1005)
.+.+.++-... .+..+-+=..+||+.+|+=...|...
T Consensus 244 ----~~~~~Lgl~~e---k~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 244 ----RVAKMLGFTKE---QVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred ----HHHHHcCCCHH---HhhccchhhhhCChHHHHHHHHHHHH
Confidence 23333332111 12211112578999999866666543
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.4e-09 Score=114.41 Aligned_cols=165 Identities=20% Similarity=0.170 Sum_probs=113.2
Q ss_pred EEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 72 LITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 72 lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
|||||+|=||..+++.|+++|. ..|.+..+...... ...+...+ ...++.+|++|++++.++++ ..|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-~~~~~~~~-~~~~~~~Di~d~~~l~~a~~-------g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-LKDLQKSG-VKEYIQGDITDPESLEEALE-------GVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-chhhhccc-ceeEEEeccccHHHHHHHhc-------CCceEE
Confidence 6999999999999999999993 23333333322211 11222222 23389999999999988774 479999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------------
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------------- 216 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------------- 216 (1005)
|+|.... ... ....+..+++|+.|+.++.+++. +....+||++||++.+..+.
T Consensus 72 H~Aa~~~-~~~-----~~~~~~~~~vNV~GT~nvl~aa~-------~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~ 138 (280)
T PF01073_consen 72 HTAAPVP-PWG-----DYPPEEYYKVNVDGTRNVLEAAR-------KAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPY 138 (280)
T ss_pred EeCcccc-ccC-----cccHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEEcCcceeEeccCCCCcccCCcCCcc
Confidence 9998754 211 23457799999999999999964 23678899999998776511
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 217 ---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|+.-+.++..........+....+++|.++..-+
T Consensus 139 ~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyG 183 (280)
T PF01073_consen 139 PSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYG 183 (280)
T ss_pred cccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeC
Confidence 233799999999988866554112112234777777655443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=115.78 Aligned_cols=168 Identities=21% Similarity=0.193 Sum_probs=114.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-----~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
+.+.+|||||+|=||..++++|.++|..++++.++..........+.. ...++.++.+|++|.+.+.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---- 89 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---- 89 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh----
Confidence 457899999999999999999999998766665543322222222211 11357889999999887766653
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C----
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F---- 216 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~---- 216 (1005)
.+|.|||+|+... . .... ++-...+++|+.|+.++.+++. +.+...||++||... +|. +
T Consensus 90 ---~~d~ViHlAa~~~-~-~~~~---~~~~~~~~~Nv~gt~nll~~~~-------~~~~~~~v~~SS~~v-yg~~~~~~~ 153 (348)
T PRK15181 90 ---NVDYVLHQAALGS-V-PRSL---KDPIATNSANIDGFLNMLTAAR-------DAHVSSFTYAASSST-YGDHPDLPK 153 (348)
T ss_pred ---CCCEEEECccccC-c-hhhh---hCHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEeechHh-hCCCCCCCC
Confidence 3899999998654 1 1111 2233568899999999999853 234567999998643 231 1
Q ss_pred -------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 217 -------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 217 -------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
....|+.+|.+.+.+++.... .++ +++.+-.+.+-+.+
T Consensus 154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~lR~~~vyGp~ 199 (348)
T PRK15181 154 IEERIGRPLSPYAVTKYVNELYADVFARSYEF------NAIGLRYFNVFGRR 199 (348)
T ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHhCC------CEEEEEecceeCcC
Confidence 124799999999998876543 344 77777776665433
|
|
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.6e-09 Score=111.16 Aligned_cols=245 Identities=20% Similarity=0.249 Sum_probs=162.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-CcccccccchhHHH
Q psy612 554 LLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSSSLV 632 (1005)
Q Consensus 554 ~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsSsl~ 632 (1005)
.-|+...||.|||+..+++...-+|-.+|-+. ...|.-|..|++| |.+.|++.|+++..
T Consensus 33 a~ea~tkal~da~ikys~vqqa~vgyvfgdst--------------------cgqraiyevgmtgipi~nvnnncatgss 92 (408)
T KOG1406|consen 33 AKEAITKALQDAGIKYSEVQQAVVGYVFGDST--------------------CGQRAIYEVGMTGIPIYNVNNNCATGSS 92 (408)
T ss_pred HHHHHHHHHHhcCCCHHHHHhhhheeeecCCc--------------------cchHHHHhccccCcceeeccCccccCch
Confidence 44788899999999888877766776666432 3456678999999 99999999999999
Q ss_pred HHHHHHHHHhcCCcCEEEEeecccCCC------------------------------HHHHHHHHH--------cCCC--
Q psy612 633 ATHIACQSLRQHECDTAISAGVNLMIS------------------------------PEAYIAMTS--------AGML-- 672 (1005)
Q Consensus 633 Al~~A~~~l~~G~~d~alvggv~~~~~------------------------------~~~~~~~~~--------~~~l-- 672 (1005)
||.+|-+-|++|..|.+|+-|.+.+.. |.....|.. .|--
T Consensus 93 alflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehmekygtk~e 172 (408)
T KOG1406|consen 93 ALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHMEKYGTKPE 172 (408)
T ss_pred HHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHHHhCCCHH
Confidence 999999999999999999999875421 000001100 0000
Q ss_pred ---------CCCCCCcCCCCCCCCcee---------------------cCccEEEEEcccchhhcCCCceEE-EEEEeee
Q psy612 673 ---------SPDGKCYVFDERANGLVP---------------------SEAVVAVVLKRLSRALSDGDPIHA-IIRGSGI 721 (1005)
Q Consensus 673 ---------s~~g~~~pfd~~a~G~~~---------------------gEGa~~vvLk~l~~A~~~g~~I~a-vI~g~~~ 721 (1005)
..+..-.||+.=.|-|.+ ++|+++.+|-+..--.+.|-.-.| +|.|.-+
T Consensus 173 hfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em 252 (408)
T KOG1406|consen 173 HFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEM 252 (408)
T ss_pred HHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHh
Confidence 012234566655555543 788888888876666665533333 3666655
Q ss_pred ccCCCCC----CCC-CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhc----------cCCC
Q psy612 722 NYDGKTN----GIT-APNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK----------NKTY 786 (1005)
Q Consensus 722 ~~dG~~~----~~~-~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~----------~~~~ 786 (1005)
..|--+. ++. .---+.-+.+.++.+++.|++|.||+.||.|.+..+ +.-|-.+||.-.=. +.+.
T Consensus 253 ~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglcpegqg~~~vdrgdnty 331 (408)
T KOG1406|consen 253 ATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFVDRGDNTY 331 (408)
T ss_pred ccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCCCCCCCceeeecCCCcc
Confidence 5553221 100 011233456778999999999999999999999875 44555555532210 0111
Q ss_pred CCCceeE---eccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 787 NQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 787 ~~~~~~i---gsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
. ..+.| |.+-|. ||+.+|.|+++......+|+.
T Consensus 332 g-gkwvinpsgglisk-ghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 332 G-GKWVINPSGGLISK-GHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred C-ceEEECCCCccccC-CCcCccchHHHHHHHHHHHhh
Confidence 1 11222 444444 999999999999999999876
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-08 Score=108.33 Aligned_cols=176 Identities=18% Similarity=0.235 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
...|+.+++.+||++||+.+++++ .+++|... + ..+.++.++..+|+ |.+-|.+||||
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID----~IIvGdl~--------~--------Q~~~As~vA~~LGI--P~fdV~~ACST 107 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD----FFLAGDLL--------N--------QIITANFVARDLGI--PFLGLYGACST 107 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeCCC--------C--------cccHHHHHHHHhCC--CEEEEeccCHH
Confidence 467889999999999999988876 56666310 0 11357778888886 89999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||+.|...|++|.+|.+||.+.+...+.+....+- +.. |. .+...-...+.|+|++||.+. .++
T Consensus 108 f~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~p----~ey-g~----q~~~ta~~tgdGAGA~vl~~~----~~~ 174 (327)
T TIGR02845 108 SMETLALGAMLVDGGFADRVLAATSSHYATAERQFRYP----TEY-GV----QKPPTAQWTVTGAGAVLLAST----GGG 174 (327)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhcccc----ccc-cc----CCCCeeeEEEcccEEEEEeec----CCC
Confidence 99999999999999999999999999755444322110 011 11 122344578999999999864 245
Q ss_pred CceEEEEEEeeeccCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 710 DPIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~~~~~~~p~------~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
-+|-..=-|--+- .|++.|+ .++-...|.+=+++.|.+|+|-|.|-+-.-|
T Consensus 175 ~~i~~~t~gkv~d-----~g~~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg 231 (327)
T TIGR02845 175 PRITSATIGKVVD-----YGITDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLA 231 (327)
T ss_pred CceEEEEEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchH
Confidence 5665443332221 2333343 3456778999999999999999999875444
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.4e-08 Score=114.51 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=109.1
Q ss_pred EEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchH----HHHHHHHhCC--------CcEEEEEecCCCHHH-H-HH
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNS----IIYKKLKKFN--------NKAIYIQVDVSDKLK-M-IS 134 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~----~~~~~l~~~g--------~~v~~~~~Dvtd~~~-v-~~ 134 (1005)
+++||||+|+||..+++.|+++|. ..|+++.|+.... .+.+.++..+ .++.++.+|++++.- + ..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 479999999999999999999983 2455555554322 2222222211 468899999987520 0 01
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
....+ ...+|.|||||+... .. ..++...++|+.|+.++.+++.. .....||++||++....
T Consensus 81 ~~~~~---~~~~d~vih~a~~~~-~~-------~~~~~~~~~nv~g~~~ll~~a~~-------~~~~~~v~iSS~~v~~~ 142 (367)
T TIGR01746 81 EWERL---AENVDTIVHNGALVN-WV-------YPYSELRAANVLGTREVLRLAAS-------GRAKPLHYVSTISVLAA 142 (367)
T ss_pred HHHHH---HhhCCEEEeCCcEec-cC-------CcHHHHhhhhhHHHHHHHHHHhh-------CCCceEEEEccccccCC
Confidence 12222 246999999998754 21 12456778999999999888532 23456999999876533
Q ss_pred CC----------------CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 215 DF----------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 215 ~~----------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
.. ....|+.+|...+.+.+.....|+ +++.+..+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~------~~~i~Rpg~v~ 195 (367)
T TIGR01746 143 IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGL------PVTIVRPGRIL 195 (367)
T ss_pred cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCC------CEEEECCCcee
Confidence 11 124699999999999887666555 77777766554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.9e-08 Score=106.52 Aligned_cols=161 Identities=23% Similarity=0.315 Sum_probs=119.0
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|=||..+++.|.++|..++.+.++.........+. .+.++.+|++|.+.+.++++.. .+|.||
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi 70 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI 70 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence 689999999999999999999998776666554332222211 6889999999999999999876 799999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------CC
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------GS 218 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------g~ 218 (1005)
|+|+... . ..+.+.....++.|+.++.++.+++... +...||++||. +..+.. ..
T Consensus 71 ~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~i~~sS~-~~y~~~~~~~~~e~~~~~~~ 137 (236)
T PF01370_consen 71 HLAAFSS-N----PESFEDPEEIIEANVQGTRNLLEAAREA-------GVKRFIFLSSA-SVYGDPDGEPIDEDSPINPL 137 (236)
T ss_dssp EEBSSSS-H----HHHHHSHHHHHHHHHHHHHHHHHHHHHH-------TTSEEEEEEEG-GGGTSSSSSSBETTSGCCHS
T ss_pred Eeecccc-c----cccccccccccccccccccccccccccc-------ccccccccccc-cccccccccccccccccccc
Confidence 9998753 1 1122456678888999999999986432 34789999994 444433 23
Q ss_pred hhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCcc
Q psy612 219 CDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~G 260 (1005)
..|+.+|...+.+.+..... +. +++.+..+.+-+.+
T Consensus 138 ~~Y~~~K~~~e~~~~~~~~~~~~------~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 138 SPYGASKRAAEELLRDYAKKYGL------RVTILRPPNVYGPG 174 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTS------EEEEEEESEEESTT
T ss_pred ccccccccccccccccccccccc------cccccccccccccc
Confidence 56999999999988876654 44 78888777665444
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.7e-08 Score=115.33 Aligned_cols=160 Identities=13% Similarity=-0.022 Sum_probs=106.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchH--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~--~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
..+++++||||+|.||+.+++.|+++|..++++.++..... ....++......+.++.+|++|++++.++++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~--- 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG--- 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence 45779999999999999999999999987665554332211 1112222223457889999999999988886531
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
+++|.||||+|... .. .. ..+++|+.++.++.+++. +....+||++||+.... ....|..
T Consensus 135 ~~~D~Vi~~aa~~~-~~-----~~----~~~~vn~~~~~~ll~aa~-------~~gv~r~V~iSS~~v~~---p~~~~~~ 194 (390)
T PLN02657 135 DPVDVVVSCLASRT-GG-----VK----DSWKIDYQATKNSLDAGR-------EVGAKHFVLLSAICVQK---PLLEFQR 194 (390)
T ss_pred CCCcEEEECCccCC-CC-----Cc----cchhhHHHHHHHHHHHHH-------HcCCCEEEEEeeccccC---cchHHHH
Confidence 27999999998532 11 11 224567788888888742 23567899999986432 2446888
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 255 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 255 (1005)
+|...+...+. ...+ .+++.|..+.
T Consensus 195 sK~~~E~~l~~-~~~g------l~~tIlRp~~ 219 (390)
T PLN02657 195 AKLKFEAELQA-LDSD------FTYSIVRPTA 219 (390)
T ss_pred HHHHHHHHHHh-ccCC------CCEEEEccHH
Confidence 88877766543 1223 3666666543
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.2e-08 Score=108.87 Aligned_cols=245 Identities=18% Similarity=0.197 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
.-|..+++.+||+++|+++++++ -+++++...++.. .-.+.+|...+|+.. +++.|..+|++
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~t~~~d~~~-------------p~~a~~v~~~Lg~~~~~~~di~~~C~g 115 (326)
T PRK05963 53 SDLAASAGDMALSDAGIERSDIA----LTLLATSTPDHLL-------------PPSAPLLAHRLGLQNSGAIDLAGACAG 115 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCCC-------------CcHHHHHHHHhCCCCCceeeccchhhH
Confidence 57899999999999999887775 5556654433211 124568999999955 88889999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||+.|...|++|. +.+||.+++... ..+.++ ....+++.|+|++++||.+-++. +
T Consensus 116 ~~~aL~~A~~~l~~~~-~~aLVv~~d~~s-----------~~~~~~-------~~~~~~lfGDgA~A~ll~~~~~~---~ 173 (326)
T PRK05963 116 FLYALVLADGFVRAQG-KPVLVVAANILS-----------RRINMA-------ERASAVLFADAAGAVVLAPSAKA---N 173 (326)
T ss_pred HHHHHHHHHHHHHcCC-CeEEEEEechhh-----------ccCCcc-------ccCceEEEeecceEEEEEecCCC---C
Confidence 9999999999999985 788888887521 112221 22357889999999999864321 1
Q ss_pred CceEEE-EEEeee-------ccCCCC---------CC--CCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 710 DPIHAI-IRGSGI-------NYDGKT---------NG--ITAPN--------GISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 710 ~~I~av-I~g~~~-------~~dG~~---------~~--~~~p~--------~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
..+... +...+- ..+|.. .. +...+ .....++++++|+++|++++||+++-.|
T Consensus 174 ~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h 253 (326)
T PRK05963 174 SGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPH 253 (326)
T ss_pred CceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 122221 111000 001100 00 00001 1223467889999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
=.+.. =.+.+.+.++-.. .. + +..+ ..+||+.+|+=...|-. .++.+.+-
T Consensus 254 ~~~~~-----~~~~~~~~l~l~~--~k-~-~~~l-~~~Gn~~sas~~~~L~~---~~~~~~~~----------------- 303 (326)
T PRK05963 254 QANAR-----IVDKVCETIGIPR--AK-A-ASTL-ETYGNSSAATIPLSLSL---ANLEQPLR----------------- 303 (326)
T ss_pred CCCHH-----HHHHHHHHcCCCH--HH-h-hhhH-HhhCcHHHHHHHHHHHH---HHHhCCCC-----------------
Confidence 65533 2334444443211 11 1 1222 57799977764444321 12222110
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+..+.++-+||.|-+-..++|+
T Consensus 304 ----------------~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 304 ----------------EGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred ----------------CCCEEEEEEEehhhhheeeEEe
Confidence 1134578889999988888875
|
|
| >PRK00982 acpP acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.5e-09 Score=93.32 Aligned_cols=72 Identities=21% Similarity=0.288 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+++.+++.+++++++++++.+| .++|+||+..+++...++++||++++..++++++||.+|++||.++
T Consensus 4 i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 76 (78)
T PRK00982 4 IFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEKH 76 (78)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHHh
Confidence 56789999999999999999999999 8999999999999999999999999999999999999999999764
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.1e-09 Score=110.70 Aligned_cols=240 Identities=21% Similarity=0.208 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhC--CCCCccccccc
Q psy612 549 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMD--LKGPVMAINTA 626 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~--l~Gps~~v~ta 626 (1005)
|-+.|.-.+...|||.+++++++.. -||+|.--..... -..+-..+---| ..=|+.||+--
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~----eVi~GnVl~AnlG-------------QapaRQaalgAGlp~sv~~tTvNkv 91 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVA----EVIFGNVLSANLG-------------QAPARQAALGAGLPYSVPATTVNKV 91 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhh----hhhhccccccccC-------------cchHHHHHhhcCCCcceeeEeehhh
Confidence 3456777788999999998887654 3666632211110 011222222223 34589999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHc-------------------------------------
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSA------------------------------------- 669 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~------------------------------------- 669 (1005)
|+|++.|+.+|.|+|+.|..|++++||.+.+...- ++...+.
T Consensus 92 CaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~a~~ 170 (396)
T KOG1390|consen 92 CASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKK 170 (396)
T ss_pred hhhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhhhHHH
Confidence 99999999999999999999999999998654311 1111111
Q ss_pred -------------------------CCCC------------------CCC------------CCcCCCCCCCCce-----
Q psy612 670 -------------------------GMLS------------------PDG------------KCYVFDERANGLV----- 689 (1005)
Q Consensus 670 -------------------------~~ls------------------~~g------------~~~pfd~~a~G~~----- 689 (1005)
|.+. .|. ..||.=...+|++
T Consensus 171 ~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVTaaNA 250 (396)
T KOG1390|consen 171 YQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTVTAANA 250 (396)
T ss_pred hCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCCeeccccc
Confidence 1111 000 1111111122222
Q ss_pred --ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy612 690 --PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 767 (1005)
Q Consensus 690 --~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~ 767 (1005)
+.+|+++++|.+.+.+.+.|-+++|.|.|++-..---..--++| .-++.++|++||+..+||+|+|..-...-
T Consensus 251 S~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP-----~laipk~lk~aG~~~sdVd~~EiNEAFs~ 325 (396)
T KOG1390|consen 251 STLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAP-----ALAIPKALKKAGLEQSDVDYWEINEAFSV 325 (396)
T ss_pred cccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccch-----HHHHHHHHHHcCcchhhhhHHhhhhhhhH
Confidence 47899999999999999999999999999974321111112344 56799999999999999999998522211
Q ss_pred CCCHHHHHHHHHHhccCCCCCCceeE--eccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 768 LGDPVEINALHDVFKNKTYNQKFCAI--TSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 768 ~gD~~E~~al~~~~~~~~~~~~~~~i--gsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
-.-|..+.++-...+ +-+ |++ -|||+.++||.-=+.-.+..|+.
T Consensus 326 -----v~lA~iK~LgldP~k---VNv~GGAV--alGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 326 -----VVLANIKKLGLDPSK---VNVHGGAV--ALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred -----HHHHHHHHhCCCHhh---ccCCCcee--ecCCCcCCcchhHHHHHHHHHHh
Confidence 112222223321111 111 222 37999999997766666666665
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.6e-08 Score=110.04 Aligned_cols=139 Identities=15% Similarity=0.160 Sum_probs=97.8
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|.||..+++.|.++|...|++++|...... +...+. ..+..|+++++.++.+.+. .++.+|.||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~----~~~~~~--~~~~~d~~~~~~~~~~~~~---~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK----FLNLAD--LVIADYIDKEDFLDRLEKG---AFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh----hhhhhh--eeeeccCcchhHHHHHHhh---ccCCCCEEE
Confidence 5899999999999999999999755666655433221 111111 3466788887766655543 356899999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC------------CCC
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------FGS 218 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------------~g~ 218 (1005)
|+|+... . +.++.+..+++|+.|+.++.+++.. ... .||++||.. .++. ...
T Consensus 72 h~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~~~~~-------~~~-~~v~~SS~~-vy~~~~~~~~e~~~~~~p~ 135 (314)
T TIGR02197 72 HQGACSD-T------TETDGEYMMENNYQYSKRLLDWCAE-------KGI-PFIYASSAA-TYGDGEAGFREGRELERPL 135 (314)
T ss_pred ECccccC-c------cccchHHHHHHHHHHHHHHHHHHHH-------hCC-cEEEEccHH-hcCCCCCCcccccCcCCCC
Confidence 9998643 1 2234567889999999999998542 123 599999964 3331 135
Q ss_pred hhhhHHHHHHHHHHHH
Q psy612 219 CDYAMGNRFQTVYAKY 234 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~ 234 (1005)
..|+.+|...+.+++.
T Consensus 136 ~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 136 NVYGYSKFLFDQYVRR 151 (314)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6799999999999875
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.7e-08 Score=109.85 Aligned_cols=154 Identities=17% Similarity=0.209 Sum_probs=103.2
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh--hcCCccE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN--NIGPIDG 148 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~--~~g~idg 148 (1005)
+|||||+|-||..+++.|+++|..++++.++....... . ....+|++|..+...+++.+.+ .++.+|.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence 79999999999999999999998777766654322111 0 1234677776666666665542 3568999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------ 216 (1005)
|||+|+... .. ..+. ...++.|+.++.+|.+++.. ... .||++||.+. +|..
T Consensus 72 Vih~A~~~~-~~---~~~~---~~~~~~n~~~t~~ll~~~~~-------~~~-~~i~~SS~~v-yg~~~~~~~~E~~~~~ 135 (308)
T PRK11150 72 IFHEGACSS-TT---EWDG---KYMMDNNYQYSKELLHYCLE-------REI-PFLYASSAAT-YGGRTDDFIEEREYEK 135 (308)
T ss_pred EEECceecC-Cc---CCCh---HHHHHHHHHHHHHHHHHHHH-------cCC-cEEEEcchHH-hCcCCCCCCccCCCCC
Confidence 999998644 22 1222 34689999999999998632 233 4889998753 2321
Q ss_pred CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
..+.|+.+|.+.+.+++..... ++ +++.+..+.+
T Consensus 136 p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lR~~~v 170 (308)
T PRK11150 136 PLNVYGYSKFLFDEYVRQILPEANS------QICGFRYFNV 170 (308)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCC------CEEEEeeeee
Confidence 1357999999988887765432 33 6666655443
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.7e-08 Score=105.29 Aligned_cols=153 Identities=18% Similarity=0.259 Sum_probs=113.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH---hCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK---KFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~---~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++|||||.|=||..++.+|.++|..++++..-.....+..+.++ ..+..+.++..|+.|.+.++++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 4789999999999999999999999998887654332223333333 23578999999999999998888765
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------- 216 (1005)
.+|.|+|.|+... .+.-.+. -.+....|+.|+++|.+. +.+.+...+|+.|| ++..|.+
T Consensus 77 ~fd~V~Hfa~~~~-vgeS~~~----p~~Y~~nNi~gtlnlLe~-------~~~~~~~~~V~sss-atvYG~p~~ip~te~ 143 (343)
T KOG1371|consen 77 KFDAVMHFAALAA-VGESMEN----PLSYYHNNIAGTLNLLEV-------MKAHNVKALVFSSS-ATVYGLPTKVPITEE 143 (343)
T ss_pred CCceEEeehhhhc-cchhhhC----chhheehhhhhHHHHHHH-------HHHcCCceEEEecc-eeeecCcceeeccCc
Confidence 5999999998765 3332222 256788999999999988 34445555665555 5555543
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+.+|-+++..++..+..
T Consensus 144 ~~t~~p~~pyg~tK~~iE~i~~d~~~~ 170 (343)
T KOG1371|consen 144 DPTDQPTNPYGKTKKAIEEIIHDYNKA 170 (343)
T ss_pred CCCCCCCCcchhhhHHHHHHHHhhhcc
Confidence 2356999999999999887654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.6e-08 Score=111.36 Aligned_cols=160 Identities=12% Similarity=0.164 Sum_probs=105.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-----CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-----NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-----g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+++|||||+|-||..+++.|+++|...|+.+.|+... ...+... ..++.++.+|++|.+.+.++++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~---~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------ 85 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK---IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------ 85 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh---hhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence 5799999999999999999999853344544554321 1222211 2358899999999988776663
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
.+|.|||+|+... ..... ... ...+..|+.|+.++.+++.. .. ..||++||.. .+|..
T Consensus 86 -~~d~ViHlAa~~~-~~~~~-~~~---~~~~~~n~~gt~~ll~aa~~-------~~-~r~v~~SS~~-vYg~~~~~~~~e 150 (386)
T PLN02427 86 -MADLTINLAAICT-PADYN-TRP---LDTIYSNFIDALPVVKYCSE-------NN-KRLIHFSTCE-VYGKTIGSFLPK 150 (386)
T ss_pred -cCCEEEEcccccC-hhhhh-hCh---HHHHHHHHHHHHHHHHHHHh-------cC-CEEEEEeeee-eeCCCcCCCCCc
Confidence 3799999998754 21111 111 23355799999999887532 12 5799999964 33321
Q ss_pred ---------------------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 217 ---------------------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ---------------------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|...+.++....+ .++ +++.+..+..-+
T Consensus 151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilR~~~vyG 214 (386)
T PLN02427 151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL------EFTIVRPFNWIG 214 (386)
T ss_pred ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCC------ceEEecccceeC
Confidence 013599999999988876543 233 667666654443
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.8e-07 Score=104.90 Aligned_cols=228 Identities=15% Similarity=0.152 Sum_probs=140.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN 624 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~ 624 (1005)
..-...+..+++.+||+++|++++++. .++++++.+ +. ...++.+|...+|++. +++-|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~~-------------~P~~a~~i~~~lgl~~~~~~~dv~ 143 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-NP-------------TPSLDAMLINRLGLRPDVKRYNLG 143 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-CC-------------CCCHHHHHHHHhCCCcccchhccc
Confidence 344568889999999999999887765 455554432 11 1235678889999974 677887
Q ss_pred -ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccc
Q psy612 625 -TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703 (1005)
Q Consensus 625 -taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~ 703 (1005)
.+|++++.||+.|...|++|..+.|||.+++..... +.++. ..+.--..+..|+|++++||.+-+
T Consensus 144 ~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~-----------~~~~d---~~~~~~~~~lfGDgaaA~ll~~~~ 209 (361)
T cd00831 144 GMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLW-----------YRGPD---HRSMLVGNALFGDGAAAVLLSNDP 209 (361)
T ss_pred cccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccce-----------eCCCC---cHHHhhhhhhccCCceEEEEEcCC
Confidence 899999999999999999999999999999863220 11111 000001357789999999999755
Q ss_pred hhhcCCCceEEEEEEeee--------------ccCCCCCCCC--CCC--HHHHHHHHHHHHHHc--CCCCCCccEEEecC
Q psy612 704 RALSDGDPIHAIIRGSGI--------------NYDGKTNGIT--APN--GISQTELIKSVYKKS--NLNPEDINYIITHG 763 (1005)
Q Consensus 704 ~A~~~g~~I~avI~g~~~--------------~~dG~~~~~~--~p~--~~~q~~~i~~al~~a--gi~~~~I~yve~hg 763 (1005)
+...-... ...+.++.. ...+....+. .|+ .....++++++|+++ |++++||+|+-.|-
T Consensus 210 ~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~ 288 (361)
T cd00831 210 RDRRRERP-LFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHP 288 (361)
T ss_pred Cccccccc-ceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECC
Confidence 43110011 111222111 0011000000 011 124456789999999 99999999999997
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeE-eccCCCcCchhhchhhHHHHHH
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~ 815 (1005)
.+-++- +++.+.++-...+ +.. -.+=..+||+.+|+=...|-..
T Consensus 289 ~~~~i~-----~~v~~~lgl~~~~---~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 289 GGRAVL-----DAVEKALGLSPED---LEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred CChHHH-----HHHHHHcCCCHHH---HHHHHHHHHHhCCchhccHHHHHHHH
Confidence 665433 3455555432111 110 0122467999988865555544
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=99.39 Aligned_cols=155 Identities=19% Similarity=0.174 Sum_probs=108.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcE-EEEecCC--CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTN-LILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~-vil~~r~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+.+|||||.|=||..+++++.++.... |+.+..- ....+..+.+.. ..+..+++.||+|.+.+.+++++- .
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~-----~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEY-----Q 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhc-----C
Confidence 368999999999999999999987643 5544332 111223333332 347899999999988888777653 7
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecC--cccccCC--------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS--SSAILGD-------- 215 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SS--ia~~~g~-------- 215 (1005)
+|.|+|.|.-..-|.++.+ =..-+++|+.|+++|.+++..+.. .-+|+.+|. +.|-++.
T Consensus 75 ~D~VvhfAAESHVDRSI~~-----P~~Fi~TNv~GT~~LLEaar~~~~------~frf~HISTDEVYG~l~~~~~~FtE~ 143 (340)
T COG1088 75 PDAVVHFAAESHVDRSIDG-----PAPFIQTNVVGTYTLLEAARKYWG------KFRFHHISTDEVYGDLGLDDDAFTET 143 (340)
T ss_pred CCeEEEechhccccccccC-----hhhhhhcchHHHHHHHHHHHHhcc------cceEEEeccccccccccCCCCCcccC
Confidence 9999999986654444433 234688999999999999765521 124777776 2222221
Q ss_pred ---CCChhhhHHHHHHHHHHHHHH-hccc
Q psy612 216 ---FGSCDYAMGNRFQTVYAKYLN-NKNI 240 (1005)
Q Consensus 216 ---~g~~~Yaaana~l~~la~~~~-~~g~ 240 (1005)
...+.|+|+|++-|.|++... ..|+
T Consensus 144 tp~~PsSPYSASKAasD~lVray~~TYgl 172 (340)
T COG1088 144 TPYNPSSPYSASKAASDLLVRAYVRTYGL 172 (340)
T ss_pred CCCCCCCCcchhhhhHHHHHHHHHHHcCC
Confidence 235679999999999999654 4455
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.3e-07 Score=100.26 Aligned_cols=176 Identities=19% Similarity=0.245 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
...|+.+++.+||++||+++++++ .+|+|... . ..+.++.++..+++ |.+-|++||||
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID----~lI~Gdll--------~--------Q~~sAs~vA~~LGI--Pa~dV~gACST 113 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID----YLLAGDLL--------N--------QIISANFAARELGI--PFLGLYGACST 113 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC--------C--------CcchHHHHHHHhCC--cEEEEeccCHH
Confidence 367899999999999999988876 66666321 0 01346677777776 99999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
+..||++|+..|++|.+|.+||.+.+...+.+..+-| =-.-|.-||.. -...+.|+|++||.+. ..+
T Consensus 114 ~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~-----P~eyg~qrp~t----aqwtvtGAGA~i~~~~----~~~ 180 (337)
T PRK08304 114 MMESLALGSMLIDGGFADRVLAATSSHFATAERQFRF-----PTEYGGQRPPT----AQWTVTGAGAVLLSRE----GSG 180 (337)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccC-----chhccccCCCc----ceEEeeccEEEEEecC----CCC
Confidence 9999999999999999999999999876555432221 00112223322 2346779999999753 234
Q ss_pred CceEEEEEEeeeccCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 710 DPIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~~~~~~~p~------~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
-+|-..=-|--+- .|+..|+ .++-...|.+=+++.|.+|+|-|.|-+-.-|
T Consensus 181 ~~i~~~t~Gkv~D-----~g~~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 181 PRITHATIGKVVD-----LGIKDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred ceEEEEeEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 4443332222221 2333343 3456778999999999999999999875444
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.3e-07 Score=107.59 Aligned_cols=229 Identities=13% Similarity=0.145 Sum_probs=134.0
Q ss_pred CChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC
Q psy612 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG 618 (1005)
Q Consensus 539 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G 618 (1005)
+..+.....+.-..|..+++.+||+++|+++++++ -|+++++.+.+ .+ -.+.++...||++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~---------~P-----~~a~~v~~~LGl~~ 158 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH---------IP-----GVDFRLVPLLGLRP 158 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC---------CC-----chHHHHHHHhCCCc
Confidence 33444444456667899999999999999888775 55666555422 11 24567888889975
Q ss_pred C---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccE
Q psy612 619 P---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 695 (1005)
Q Consensus 619 p---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~ 695 (1005)
- .+-+..+|++.+.||+.|...|++|....+||.+++....- +.+..+. .++..-.+..+|+|++
T Consensus 159 ~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~-----------~~~~d~~-~~~~~v~~~LFGDGAa 226 (399)
T PLN03171 159 SVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLL-----------FNGPDEG-CFQTLLNQGLFGDGAA 226 (399)
T ss_pred ccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccc-----------cCCCCcc-cHHhhhccccccCccE
Confidence 3 35566799999999999999999999999999999973210 1111110 1122223678999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeecc-------------CCCCC-CCCCCCH-HHHHHHHHHHHHH---------cCC
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINY-------------DGKTN-GITAPNG-ISQTELIKSVYKK---------SNL 751 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~-------------dG~~~-~~~~p~~-~~q~~~i~~al~~---------agi 751 (1005)
++||++-+...+. .++ .|....... +|... .+...+. ....+.+++++++ +|+
T Consensus 227 A~vl~~~~~~~~~--~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~ 303 (399)
T PLN03171 227 AVIVGADADAAER--PLF-EIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGA 303 (399)
T ss_pred EEEEecCCCCCCC--Cce-EEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 9999874432111 122 222211111 11111 1111222 3344445666554 688
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhh
Q psy612 752 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGL 809 (1005)
Q Consensus 752 ~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~ 809 (1005)
+++||+++ .|=.+- -=++++.+.++-...+ +... .+=...|++-+|+=.
T Consensus 304 ~~~di~~~-~Hq~~~-----~il~~v~~~Lgl~~ek---~~~s~~~l~~yGNtssaSip 353 (399)
T PLN03171 304 EWNDLFWA-VHPGSS-----AILDQVDAALGLEPEK---LAASRRVLSDYGNMFGATVI 353 (399)
T ss_pred CcccceEE-EcCCcH-----HHHHHHHHHcCCCHHH---hHHHHHHHHHhCcchhhhHH
Confidence 99999998 684333 3445556665432211 1110 112356888776533
|
|
| >CHL00124 acpP acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.3e-08 Score=88.93 Aligned_cols=76 Identities=20% Similarity=0.294 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhh-cCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLAD-YGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~e-lG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+.+.+.+++.+++.++++++.|+++.+|.+ +|+||+..++|...|+++||++++...+++.+|+.+|++||.++..
T Consensus 4 ~~i~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 80 (82)
T CHL00124 4 NDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQKIN 80 (82)
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 346678999999999999999999999987 9999999999999999999999999999999999999999987643
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.3e-07 Score=105.79 Aligned_cols=164 Identities=12% Similarity=0.037 Sum_probs=108.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+..++++|||||+|-||..++++|.++|..++++.++.... +......+.++.+|++|.+.+..++.
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 84 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK------ 84 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh------
Confidence 345778999999999999999999999997665555433211 11111124667899999877655542
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------- 213 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---------- 213 (1005)
.+|.|||+|+... ........ ....+..|+.++.++.+++. ......||++||..-+-
T Consensus 85 -~~D~Vih~Aa~~~-~~~~~~~~---~~~~~~~N~~~t~nll~aa~-------~~~vk~~V~~SS~~vYg~~~~~~~~~~ 152 (370)
T PLN02695 85 -GVDHVFNLAADMG-GMGFIQSN---HSVIMYNNTMISFNMLEAAR-------INGVKRFFYASSACIYPEFKQLETNVS 152 (370)
T ss_pred -CCCEEEEcccccC-CccccccC---chhhHHHHHHHHHHHHHHHH-------HhCCCEEEEeCchhhcCCccccCcCCC
Confidence 4799999998643 11111111 23456789999999999853 22456899999964210
Q ss_pred -------CCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 214 -------GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 214 -------g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
+....+.|+.+|...+.+++..... ++ +++.+..+.+-
T Consensus 153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~------~~~ilR~~~vy 198 (370)
T PLN02695 153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGI------ECRIGRFHNIY 198 (370)
T ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEECCcc
Confidence 1123457999999999988765433 44 66666654443
|
|
| >PRK05883 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.6e-08 Score=89.06 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
.+.+..+|++.+++.|++++++|+++.+| .+||+|||..+++...|+++||++++..++.+.+|+.+|++|+..+.
T Consensus 12 ~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~~~ 88 (91)
T PRK05883 12 PSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAAKV 88 (91)
T ss_pred HHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHc
Confidence 34578899999999999999999999999 78999999999999999999999999999999999999999997754
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.5e-07 Score=113.90 Aligned_cols=166 Identities=16% Similarity=0.200 Sum_probs=109.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
..+++|||||+|-||..+++.|+++|. ..|+...|....... ..+.. ....+.++.+|++|.+.+..++..
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----- 78 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT----- 78 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence 468999999999999999999999852 344444443211111 11111 134688899999998877665432
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
..+|.|||+|+....+. ...+-...+++|+.|+.++.+++.. ......||++||... +|..
T Consensus 79 ~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~------~~~vkr~I~~SS~~v-yg~~~~~~~~~ 146 (668)
T PLN02260 79 EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKV------TGQIRRFIHVSTDEV-YGETDEDADVG 146 (668)
T ss_pred cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHh------cCCCcEEEEEcchHH-hCCCccccccC
Confidence 36999999998754111 1112245678999999999988532 123568999999643 2211
Q ss_pred --------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcc
Q psy612 217 --------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 --------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w 256 (1005)
....|+.+|...+.+.+.... .++ +++.+..+..
T Consensus 147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l------~~vilR~~~V 189 (668)
T PLN02260 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL------PVITTRGNNV 189 (668)
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCC------CEEEECcccc
Confidence 135699999999998876543 343 6666665433
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.5e-07 Score=100.65 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=97.9
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|.||..++++|.++|..+++ +.|+ .+|+.+.+++.++++.. .+|.||
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~-~~r~--------------------~~d~~~~~~~~~~~~~~-----~~d~vi 55 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVA-LTSS--------------------QLDLTDPEALERLLRAI-----RPDAVV 55 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEE-eCCc--------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence 799999999999999999999876544 4442 47999999988887652 589999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------CCCh
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FGSC 219 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-----------~g~~ 219 (1005)
|+||... ... .....+..+++|+.++.++.+++.. .+ ..||++||...+-+. ....
T Consensus 56 ~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 122 (287)
T TIGR01214 56 NTAAYTD-VDG----AESDPEKAFAVNALAPQNLARAAAR-------HG-ARLVHISTDYVFDGEGKRPYREDDATNPLN 122 (287)
T ss_pred ECCcccc-ccc----cccCHHHHHHHHHHHHHHHHHHHHH-------cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcc
Confidence 9998654 211 1223456788999999999988532 12 368999986432111 1245
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
.|+.+|...+.+++.. +. +++.+..+..
T Consensus 123 ~Y~~~K~~~E~~~~~~---~~------~~~ilR~~~v 150 (287)
T TIGR01214 123 VYGQSKLAGEQAIRAA---GP------NALIVRTSWL 150 (287)
T ss_pred hhhHHHHHHHHHHHHh---CC------CeEEEEeeec
Confidence 7999999988887654 22 5556655443
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.7e-07 Score=105.03 Aligned_cols=144 Identities=13% Similarity=0.023 Sum_probs=99.9
Q ss_pred EEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q psy612 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLH 151 (1005)
Q Consensus 72 lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh 151 (1005)
|||||+|-||..+++.|.++|..++++..+ ..+|++|.+++.++++.. .+|.|||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih 55 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL 55 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 699999999999999999999876655332 147999998888776552 5799999
Q ss_pred cCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--------------C-
Q psy612 152 IAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------------F- 216 (1005)
Q Consensus 152 ~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--------------~- 216 (1005)
+|+... ...-.. +.-...+++|+.++.++.+++. +.....||++||.. ++|. +
T Consensus 56 ~A~~~~-~~~~~~---~~~~~~~~~n~~~~~~ll~~~~-------~~~~~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~ 123 (306)
T PLN02725 56 AAAKVG-GIHANM---TYPADFIRENLQIQTNVIDAAY-------RHGVKKLLFLGSSC-IYPKFAPQPIPETALLTGPP 123 (306)
T ss_pred eeeeec-ccchhh---hCcHHHHHHHhHHHHHHHHHHH-------HcCCCeEEEeCcee-ecCCCCCCCCCHHHhccCCC
Confidence 998643 111111 1223467889999999999853 23456799999964 3331 1
Q ss_pred --CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 217 --GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 --g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|...+.+++...+ .++ +++.+..+.+-+
T Consensus 124 ~p~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~~R~~~vyG 162 (306)
T PLN02725 124 EPTNEWYAIAKIAGIKMCQAYRIQYGW------DAISGMPTNLYG 162 (306)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhCC------CEEEEEecceeC
Confidence 112499999999988765543 333 677777665543
|
|
| >PRK12449 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.1e-08 Score=85.82 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+.+.+.+++.+++.+++++..|.++.+| .+||+||+..++|...|+++||+.++..++++++|+.+|++||.+++
T Consensus 4 ~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~~~ 79 (80)
T PRK12449 4 EEIFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQRL 79 (80)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHhc
Confidence 3466789999999999998999999999 69999999999999999999999999999999999999999997753
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.1e-07 Score=103.08 Aligned_cols=158 Identities=17% Similarity=0.169 Sum_probs=107.5
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|-||..++++|.++|..++.+.+......... ..+..+.+|+++.+.+.++++.. . |.||
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~----~--d~vi 69 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV----P--DAVI 69 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC----C--CEEE
Confidence 899999999999999999999887776665443322111 35778899999984444433221 1 9999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----CCC--------
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----FGS-------- 218 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~----~g~-------- 218 (1005)
|+|+... .. ....+ .....+.+|+.|+.++.+++. ......||+.||.+...+. +-.
T Consensus 70 h~aa~~~-~~-~~~~~--~~~~~~~~nv~gt~~ll~aa~-------~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p 138 (314)
T COG0451 70 HLAAQSS-VP-DSNAS--DPAEFLDVNVDGTLNLLEAAR-------AAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP 138 (314)
T ss_pred EccccCc-hh-hhhhh--CHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEeCCCceECCCCCCCCcccccCCCCC
Confidence 9998765 21 11111 345688999999999999953 2356678886665544432 111
Q ss_pred -hhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 219 -CDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 219 -~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
..|+.+|...+.+++.... .++ +++.+.++.+-+
T Consensus 139 ~~~Yg~sK~~~E~~~~~~~~~~~~------~~~ilR~~~vyG 174 (314)
T COG0451 139 LNPYGVSKLAAEQLLRAYARLYGL------PVVILRPFNVYG 174 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC------CeEEEeeeeeeC
Confidence 1499999999999887765 223 677777664443
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.1e-08 Score=114.30 Aligned_cols=246 Identities=20% Similarity=0.229 Sum_probs=140.9
Q ss_pred HHHHHHHHHhcCCC--CCCCCCC-ceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccchh
Q psy612 555 LQESWLALEDAGYG--PNQIANQ-KIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSS 629 (1005)
Q Consensus 555 L~~a~~AledAG~~--~~~~~~~-~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCsS 629 (1005)
-+....++.||++. +++++.. --.+++|+.... +.....++..++...|+.+ |.++|+.+|+|
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~------------g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~S 94 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQA------------GEQGQNIARQAALAAGLPGSVPAVTVNRACAS 94 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheecccccc------------ccccccHHHHHHHHcCCCCCCCceEEeccchh
Confidence 35666777888863 2244443 225666643221 1122346667889999997 99999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHH----HH-----------------------------HHHHcCCCC---
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEA----YI-----------------------------AMTSAGMLS--- 673 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~----~~-----------------------------~~~~~~~ls--- 673 (1005)
++.|++.|+++|++|++|++||||++.+..... .. .+.+.| .+
T Consensus 95 G~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yG-itre~ 173 (392)
T COG0183 95 GLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYG-ISRED 173 (392)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHHHHHHHHhC-CCHHH
Confidence 999999999999999999999999965432211 00 001111 11
Q ss_pred ---------------CC-C----------CCcCCCCC----CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeec-
Q psy612 674 ---------------PD-G----------KCYVFDER----ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN- 722 (1005)
Q Consensus 674 ---------------~~-g----------~~~pfd~~----a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~- 722 (1005)
|. + .-++|+.+ .|-....||++++++-..+.+ | .++.|.+..
T Consensus 174 ~d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i 246 (392)
T COG0183 174 QDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGI 246 (392)
T ss_pred HHHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCCCChhhhcCceeccccCC---c----eEEEeccccc
Confidence 00 0 01122211 111135678888777554432 1 445555422
Q ss_pred cCCCCCCCCCCCHHH-----HHHHHHHHHHHcCCCCC--CccEEEecCCCCCCCCH-HHH---------HHHHHH-hccC
Q psy612 723 YDGKTNGITAPNGIS-----QTELIKSVYKKSNLNPE--DINYIITHGTGTKLGDP-VEI---------NALHDV-FKNK 784 (1005)
Q Consensus 723 ~dG~~~~~~~p~~~~-----q~~~i~~al~~agi~~~--~I~yve~hgtgt~~gD~-~E~---------~al~~~-~~~~ 784 (1005)
+||...-.+...... -..+-.++|+.+|++|. ++++.|.|..-|..+-. +|- -++... .-..
T Consensus 247 ~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~~~~~~~ 326 (392)
T COG0183 247 NDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKI 326 (392)
T ss_pred ccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceecChHHHHHHHhhHHh
Confidence 233311111111111 12334567788888887 78888888777665544 332 111111 1011
Q ss_pred CCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 785 TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 785 ~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
....+.-+-|..|+. ||+.+|+|+..+..++.+|+.
T Consensus 327 ~G~~~VN~~GGaiA~-GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 327 LGDLPVNPSGGAIAL-GHPIGATGARILVELARQLRG 362 (392)
T ss_pred cCCceeCCCcchhhc-CCCccchHHHHHHHHHHHHhh
Confidence 111111234777776 999999999999999999998
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=98.62 E-value=8e-07 Score=102.60 Aligned_cols=213 Identities=17% Similarity=0.184 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCs 628 (1005)
.-|.++++.+||+++ +++++. -+++|+..+.+.. ...+..|...||+++ +++-+..+|+
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~~-------------~s~a~~v~~~Lgl~~~~~~~dv~~aC~ 110 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQS-------------KAAAVYVHGLLGLQPFCRSFELKQACY 110 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCCC-------------CCHHHHHHHHhCCCCCceEEEeccccH
Confidence 578999999999998 555554 5667765543211 136788899999986 7888999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
+++.||++|...|++|..+.|||.+++.... . + ....-...|+|++++||.+-
T Consensus 111 gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~----------~---~--------~~~~~~~~GdGA~A~Ll~~~------ 163 (379)
T TIGR01835 111 GATAALQMAKGHVALSPDRKVLVIASDIAKY----------G---L--------ESPGEPTQGAGAVAMLVSAD------ 163 (379)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeehhhc----------c---c--------CCCCCccccCccEEEEEecC------
Confidence 9999999999999999999999999986210 0 0 01112457999999999752
Q ss_pred CCceEEEEEEeeeccCCC-----CCCCCCC--CH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 709 GDPIHAIIRGSGINYDGK-----TNGITAP--NG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~-----~~~~~~p--~~--------~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
.+|..+-.++....+.. ..+...| ++ .....++++.++++|++++||+|+-.|-.-++++-
T Consensus 164 -~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~--- 239 (379)
T TIGR01835 164 -PKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGL--- 239 (379)
T ss_pred -CCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHH---
Confidence 23433211211111111 1111122 11 13347788889999999999999999986665432
Q ss_pred HHHHHHHhccCCCCC-Cce------eEeccCCCcCchhhchhhHHHHHH
Q psy612 774 INALHDVFKNKTYNQ-KFC------AITSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~-~~~------~igsvK~~iGH~~~AaG~~~lik~ 815 (1005)
+++.++++...... ..+ .+ -.-..+||+.+|+=..+|...
T Consensus 240 -k~~~~~l~~~~~~~~~~~~~~~~~s~-~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 240 -KALRHILKKNYEDEDESVQNAYLESI-IYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred -HHHHHHHhhcccccHHHHHHHhhhhh-hhhhhcCchHhHHHHHHHHHH
Confidence 23333322110000 000 00 012378999999877776654
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.4e-07 Score=104.25 Aligned_cols=224 Identities=15% Similarity=0.139 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCC---ccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP---VMAINTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gp---s~~v~ta 626 (1005)
...|..+++.+||+++|++++++. -+++++.. ++. .+ -.+..|...||++.- .+-+..+
T Consensus 106 ~~~La~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~--------~P-----~~a~~l~~~LGl~~~~~~~~d~~~g 167 (391)
T PLN03169 106 VTQMAVEASLACIKEWGRPVSDIT----HLVYVSSS-EAR--------LP-----GGDLYLAKQLGLSPDVQRVMLYFLG 167 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCC----EEEEECcC-CCC--------CC-----cHHHHHHHHhCcCCcceeeecccCh
Confidence 356889999999999999887765 45555432 221 11 235678888999763 4778899
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|++++.||..|...|++|....+||.+++.. +.. +. .++ .-+ ++.......+|+|++++||++-..+.
T Consensus 168 C~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~-s~~----~~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl~~~~~~~ 235 (391)
T PLN03169 168 CSGGVAGLRVAKDIAENNPGSRVLLTTSETT-ILG----FR-----PPS-PDR-PYDLVGAALFGDGAAAVIIGADPIPV 235 (391)
T ss_pred hHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC-hhh----cc-----CCC-ccc-hhhhhhhhhccCceEEEEEecCCCcc
Confidence 9999999999999999999999999999873 111 10 010 001 12223345789999999998643321
Q ss_pred cCCCceEEEEE-------Eee------eccCCCC--CCCCCCC--HHHHHHHHHHHHHHcCCCCCCcc--EEEecCCCCC
Q psy612 707 SDGDPIHAIIR-------GSG------INYDGKT--NGITAPN--GISQTELIKSVYKKSNLNPEDIN--YIITHGTGTK 767 (1005)
Q Consensus 707 ~~g~~I~avI~-------g~~------~~~dG~~--~~~~~p~--~~~q~~~i~~al~~agi~~~~I~--yve~hgtgt~ 767 (1005)
.+..++.... ++. +..+|.. .+-..|+ ......+++++|+++|++++||+ ++-.|=.+.
T Consensus 236 -~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~- 313 (391)
T PLN03169 236 -SESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGP- 313 (391)
T ss_pred -cCCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCH-
Confidence 0112221111 110 0011100 0111121 22345678999999999999898 877885553
Q ss_pred CCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHH
Q psy612 768 LGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSL 812 (1005)
Q Consensus 768 ~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~l 812 (1005)
-=++++.+.++-... .+... .+=...||+-+|+=...|
T Consensus 314 ----~il~~v~~~Lgl~~e---k~~~s~~~l~~~GNtsSasip~~L 352 (391)
T PLN03169 314 ----AILNRLEKKLKLAPE---KLECSRRALMDYGNVSSNTIVYVL 352 (391)
T ss_pred ----HHHHHHHHHcCCCHH---HHHHHHHHHHHhCCchHhHHHHHH
Confidence 334455555542211 11110 112356998887644333
|
|
| >PRK05350 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.1e-08 Score=85.76 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+.+.+.+++.+++.+++++++|+++.+| .++|+|||..++|...|+++||++++..++.+..|++++++|+.+..
T Consensus 5 ~~i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~~ 80 (82)
T PRK05350 5 EEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERLL 80 (82)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHHh
Confidence 3466789999999999999999999996 99999999999999999999999999999999999999999998754
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.7e-07 Score=104.81 Aligned_cols=345 Identities=11% Similarity=0.125 Sum_probs=194.3
Q ss_pred CcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccC----
Q psy612 463 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 537 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 537 (1005)
-+..|.|++-.+|.- ...+++++.+..=-+. ...|..+-.....+.. ..+..++....+++...++.++
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKS-EHMTELKEKFKRMCDK-----SQIRKRYMHLTEEYLAENPNMCAYMA 92 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccc-cCchhHHHHHHHHHHh-----CCCCceeEeccccchhhCccccccCC
Confidence 346799999999984 5666777776542211 1112111101112221 1222233222222222223333
Q ss_pred -CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC
Q psy612 538 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 538 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
.+..+.....+-.-.|..+++.+||++||++++++. -+++.++.+.. . .-++.+|...||+
T Consensus 93 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg~~---------~-----Ps~a~~l~~~LGl 154 (401)
T PLN03170 93 PSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT----HLVFCTTSGVD---------M-----PGADYQLTKMLGL 154 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCC---------C-----ChHHHHHHHHhCc
Confidence 445555555555667899999999999999887764 34444443211 1 1367889999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 617 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 617 ~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
+.- .+-+..+|++++.||..|.+.+++|....+||.++++... . +. .++. .+ .+..-....+|+|
T Consensus 155 ~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~-~----~~-----~~~~-~~-~~~~~~~~LFGDG 222 (401)
T PLN03170 155 RPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAV-T----FR-----GPSE-SH-LDSMVGQALFGDG 222 (401)
T ss_pred CcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhh-c----cC-----Cccc-ch-hhhhhhhhhhhce
Confidence 874 5789999999999999999999999999999999997431 0 00 1110 00 1111223578999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEee--------------eccCCCCCCC--CCCC--HHHHHHHHHHHHHHcCCCCCC
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSG--------------INYDGKTNGI--TAPN--GISQTELIKSVYKKSNLNPED 755 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~--------------~~~dG~~~~~--~~p~--~~~q~~~i~~al~~agi~~~~ 755 (1005)
++++||.+-+... -.... ..+.+.. +..+|....+ ..|. ......+++++|+++|++++|
T Consensus 223 AaAvVl~~~~~~~-~~~~~-~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~d 300 (401)
T PLN03170 223 AAAVIVGADPDER-VERPL-FQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYN 300 (401)
T ss_pred eEEEEEecCCccc-ccCCc-eEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 9999998643210 00111 1122211 1111211001 0111 233456788999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeE-eccCCCcCchhhchhhHHHHHHHH-HhhcCCCCCCCCCCCc
Q psy612 756 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQ-SIKYKIIPASLHCEKE 833 (1005)
Q Consensus 756 I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~~l-~l~~~~ipp~~~~~~~ 833 (1005)
|+++-.|=-|.. =++++.+.++-...+ +.. -.+=...||+-+|+=+..|-+..- .++.|.+.+
T Consensus 301 i~~~v~Hqgg~~-----il~~v~~~Lgl~~~~---~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~------- 365 (401)
T PLN03170 301 SIFWVAHPGGPA-----ILDQVEAKVGLEKER---MRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT------- 365 (401)
T ss_pred cCeEEecCCcHH-----HHHHHHHHcCCChHH---HHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCC-------
Confidence 999999955443 344555555432111 100 012235699988875555444321 012222211
Q ss_pred ccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 834 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 834 n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
.+........+||.|=+-..++|+..+
T Consensus 366 -----------------------G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 366 -----------------------GEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred -----------------------CCCccEEEEEEeCchHhHHhHHheecc
Confidence 001134578899999999999998644
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.8e-07 Score=102.24 Aligned_cols=344 Identities=14% Similarity=0.153 Sum_probs=189.3
Q ss_pred CcEEEEeeccccCC-CCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccC----
Q psy612 463 ELIAIIGMSGRFPA-ARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 537 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~-~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 537 (1005)
-+..|.|++-..|- ....+++++.+..--+. ...+..+-.....+.. ..+..++....++....++.++
T Consensus 15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 88 (393)
T PLN03172 15 GPATILAIGKATPANCVSQADYPDYYFRITNS-EHMTELKEKFKRMCDK-----SMIKKRYMHLTEEILKENPNMCAYMA 88 (393)
T ss_pred CCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCchHHHHHHHHHHHh-----cCCCceeEeccchhhhhCccccccCC
Confidence 45789999999998 45566666655421110 0111110001111111 1222233222111111112232
Q ss_pred -CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC
Q psy612 538 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 538 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
.+..+....+.-.-.|..+++.+||++||++++++. -++++++.+.. . + .++.++...||+
T Consensus 89 p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~---------~----P-~~a~~l~~~LGl 150 (393)
T PLN03172 89 PSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD---------M----P-GADYQLTKLLGL 150 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc---------C----c-hHHHHHHHHhCC
Confidence 445555555566678899999999999999887764 44455544311 1 1 367889999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 617 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 617 ~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
+.- .+.+..+|++++.||..|.+.+++|....+||.++++..-. +..++.+ ..+.--....+|+|
T Consensus 151 ~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~----------~~~~~d~--~~~~~v~~~LFGDG 218 (393)
T PLN03172 151 KPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVT----------FRGPSDT--HLDSLVGQALFGDG 218 (393)
T ss_pred CCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhh----------hcccccc--cHHhhhccchhcCc
Confidence 874 35668999999999999999999999999999999974310 0111110 00011124578999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEee----eccCCCC------CCC---CCCC-----HHHHHHHHHHHHHHcCCCCCC
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSG----INYDGKT------NGI---TAPN-----GISQTELIKSVYKKSNLNPED 755 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~----~~~dG~~------~~~---~~p~-----~~~q~~~i~~al~~agi~~~~ 755 (1005)
++++||++-.+.. ....++.++ ++. ...+|.. .|+ ..+. .......+++.|++.|+++.|
T Consensus 219 AaAvVl~~~~~~~-~~~~~~~i~-~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~d 296 (393)
T PLN03172 219 AAAVIIGADPDTK-IERPLFEIV-SAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWN 296 (393)
T ss_pred eEEEEEecCCCCc-ccCceeEEe-eeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 9999998643221 111223332 221 1222210 111 0121 123456778889999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHH-HhhcCCCCCCCCCCCc
Q psy612 756 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQ-SIKYKIIPASLHCEKE 833 (1005)
Q Consensus 756 I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l-~l~~~~ipp~~~~~~~ 833 (1005)
|+++-.|=-|-+ =++++.+.++-...+ +... .+=...|++-+|+=+.-|-+..- .++.+.+.
T Consensus 297 i~~~~~Hqgg~~-----Il~~v~~~Lgl~~~~---~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~-------- 360 (393)
T PLN03172 297 SIFWIAHPGGPA-----ILDQVEIKLDLKEEK---LRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGS-------- 360 (393)
T ss_pred cceEEecCCcHH-----HHHHHHHHcCCCHHH---HHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCC--------
Confidence 999999965544 445555665432111 1000 11234588877663333322210 01111110
Q ss_pred ccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 834 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 834 n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
...........+||.|=+-..++|+..
T Consensus 361 ----------------------~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 361 ----------------------TGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred ----------------------CCCCcceEEEEEeCCcceeeeeeeEec
Confidence 001113467889999999999999863
|
|
| >PRK09184 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-07 Score=84.99 Aligned_cols=74 Identities=23% Similarity=0.380 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHhCC---CCcccccCCch--hhcCCchHHHHHHHHHHHhhcCcccCc---cccccCCCHHHHHHHHHH
Q psy612 336 FIENDIKNHICNILNT---KKSEIYKNKNL--ADYGFDSISLAEFSRILSKFYSLDIMP---SIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~---~~~~i~~~~~l--~elG~DSL~a~el~~~l~~~~g~~l~~---~~lf~~~Ti~~La~~l~~ 407 (1005)
.+...|++.|++.|++ ++++|+++.+| .+||+|||-+++|...+++.||++++. ..++..+|+++|++|+.+
T Consensus 6 ~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~I~~ 85 (89)
T PRK09184 6 ALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAYVAA 85 (89)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHHHHH
Confidence 4677899999999985 88999999998 459999999999999999999999974 446778999999999987
Q ss_pred hh
Q psy612 408 NH 409 (1005)
Q Consensus 408 ~~ 409 (1005)
+.
T Consensus 86 ~~ 87 (89)
T PRK09184 86 HR 87 (89)
T ss_pred hh
Confidence 53
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.3e-06 Score=95.13 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=94.0
Q ss_pred EECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHH--------------hCCCcEEEEEecCCCHH-HH-HHH
Q psy612 73 ITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLK--------------KFNNKAIYIQVDVSDKL-KM-ISE 135 (1005)
Q Consensus 73 ITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~--------------~~g~~v~~~~~Dvtd~~-~v-~~~ 135 (1005)
|||++|-||..+.+.|++++. .+|+++-|........+++. ....+++++..|++++. .+ ...
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999976 26666666554333333331 12568999999999854 11 122
Q ss_pred HHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy612 136 INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 215 (1005)
Q Consensus 136 ~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~ 215 (1005)
.+.+.+ .+|.|||||+...... .++...++|+.|+.++.+.+. ..+...|+++|| +...+.
T Consensus 81 ~~~L~~---~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~-------~~~~~~~~~iST-a~v~~~ 141 (249)
T PF07993_consen 81 YQELAE---EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAA-------QGKRKRFHYIST-AYVAGS 141 (249)
T ss_dssp HHHHHH---H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHT-------SSS---EEEEEE-GGGTTS
T ss_pred hhcccc---ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHH-------hccCcceEEecc-ccccCC
Confidence 333323 4999999998766222 234467899999999999853 223337999999 322221
Q ss_pred C---------------------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 216 F---------------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 216 ~---------------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
. ....|..+|..-+.+.+...++ |+ ++..+.+|...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~------p~~I~Rp~~i~ 199 (249)
T PF07993_consen 142 RPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGL------PVTIYRPGIIV 199 (249)
T ss_dssp -TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---------EEEEEE-EEE
T ss_pred CCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCc------eEEEEecCccc
Confidence 1 1246999999999999887766 66 77777776553
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.3e-07 Score=110.66 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=106.3
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHhhc
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIINNI 143 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~-v~~~~~~i~~~~ 143 (1005)
++.++++|||||+|-||..++++|++++...|+.+.|.... . ..+.. ...+.++.+|++|..+ +++++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~--~-~~~~~-~~~~~~~~gDl~d~~~~l~~~l------- 380 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA--I-SRFLG-HPRFHFVEGDISIHSEWIEYHI------- 380 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh--h-hhhcC-CCceEEEeccccCcHHHHHHHh-------
Confidence 45788999999999999999999998743344444454321 1 11111 1357888999998654 33333
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
..+|.|||+|+... .... ..+ -...+++|+.|+.++.+++.. .. ..||++||.. .+|..
T Consensus 381 ~~~D~ViHlAa~~~-~~~~-~~~---~~~~~~~Nv~~t~~ll~a~~~-------~~-~~~V~~SS~~-vyg~~~~~~~~E 446 (660)
T PRK08125 381 KKCDVVLPLVAIAT-PIEY-TRN---PLRVFELDFEENLKIIRYCVK-------YN-KRIIFPSTSE-VYGMCTDKYFDE 446 (660)
T ss_pred cCCCEEEECccccC-chhh-ccC---HHHHHHhhHHHHHHHHHHHHh-------cC-CeEEEEcchh-hcCCCCCCCcCc
Confidence 25899999999755 2111 112 234678999999999988642 22 4689999964 23310
Q ss_pred ------------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 217 ------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 ------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|.+.+.+++..... ++ +++.+..+.+-
T Consensus 447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~------~~~ilR~~~vy 494 (660)
T PRK08125 447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGL------RFTLFRPFNWM 494 (660)
T ss_pred cccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCC------ceEEEEEceee
Confidence 1236999999999998876433 44 66666655443
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-07 Score=101.40 Aligned_cols=102 Identities=11% Similarity=0.121 Sum_probs=78.0
Q ss_pred CEEEEECC-hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg-~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+=.||.. +||||+++|+.|+++|++++++. +... +.... ...||+++.+++.++++.+.+.+|++|
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~-~~~~-------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVT-TKRA-------LKPEP----HPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEc-Chhh-------ccccc----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 34457764 78999999999999999776654 3211 11111 245899999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~ 186 (1005)
++|||||+.. ..++.+.+.++|++++.. +++.+.+
T Consensus 83 iLVnnAgv~d-~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 83 ILIHSMAVSD-YTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred EEEECCEecc-ccchhhCCHHHHhhhcch---hhhhccc
Confidence 9999999876 778999999999988543 4444443
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=102.78 Aligned_cols=242 Identities=13% Similarity=0.144 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
...+..+++.+||++||+++++++ -+++++...++.. ...+.+|...||++. +++-|..+|
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~~-------------P~~a~~v~~~Lg~~~~~~~~di~~~C 122 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFFM-------------PSTACYLHQLLNLSSKTIAFDLGQAC 122 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------CcHHHHHHHHhCCCCCceEEehhhhh
Confidence 467889999999999999988775 5666665544321 236788999999974 678899999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
++++.||+.|...|++|..+ +++.+++.. + ..+.++. ...-..+|+|++++||++-+.+
T Consensus 123 ~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~-S----------~~~~~~d-------~~~~~lFGDGAaA~vl~~~~~~-- 181 (353)
T PRK12880 123 AGYLYGLFVAHSLIQSGLGK-ILLICGDTL-S----------KFIHPKN-------MNLAPIFGDGVSATLIEKTDFN-- 181 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCC-EEEEEehhh-h----------ccCCccc-------CCceeeecccceEEEEEecCCC--
Confidence 99999999999999999999 777777652 1 1122221 1224578999999999863322
Q ss_pred CCCceEEEEEEeeec-------cCCC-CC-------C-CC-----------CCC-H-------HHHHHHHHHHHHHcCCC
Q psy612 708 DGDPIHAIIRGSGIN-------YDGK-TN-------G-IT-----------APN-G-------ISQTELIKSVYKKSNLN 752 (1005)
Q Consensus 708 ~g~~I~avI~g~~~~-------~dG~-~~-------~-~~-----------~p~-~-------~~q~~~i~~al~~agi~ 752 (1005)
..++ .+...+.. .+|. .. . .. ..+ . .....+++++|+++|++
T Consensus 182 --~~~~-~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~ 258 (353)
T PRK12880 182 --EAFF-ELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVD 258 (353)
T ss_pred --CceE-EEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1111 11111100 0010 00 0 00 001 1 11236789999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCC
Q psy612 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 832 (1005)
Q Consensus 753 ~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 832 (1005)
++||+++-.|= +..-=++++.+.++-...+ ++...+ ...|++-+|+=...|-.. ++.+
T Consensus 259 ~~did~~v~HQ-----~~~~i~~~i~~~Lgl~~ek---~~~~~l-~~~GNtssasip~~L~~~---~~~~---------- 316 (353)
T PRK12880 259 EKDIAFHLFHQ-----SNAYLVDCIKEELKLNDDK---VPNFIM-EKYANLSACSLPALLCEL---DTPK---------- 316 (353)
T ss_pred HHHCCEEEECC-----CCHHHHHHHHHHhCCCHHH---hhhhhH-HhhCCHHHHHHHHHHHHH---HHcC----------
Confidence 99999999994 3444556677766532211 211112 346888776644333322 1110
Q ss_pred cccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 833 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 833 ~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+.+ ....+||.|=+-+.++|+=
T Consensus 317 --------------------------~~~-~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 317 --------------------------EFK-ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred --------------------------CcE-EEEEEEchhhhheEeEEEE
Confidence 112 4688899999999999873
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.4e-07 Score=103.30 Aligned_cols=305 Identities=11% Similarity=0.134 Sum_probs=167.8
Q ss_pred CcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccC----
Q psy612 463 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 537 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 537 (1005)
-+..|.|++-.+|.- ...+++++.+.+--.. ...|..+-.....+.. ..+..++....++...-++.++
T Consensus 15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 88 (391)
T PLN03173 15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNS-EHKVELKEKFKRMCEK-----SMIKKRYMHLTEEILKENPSVCEYMA 88 (391)
T ss_pred CCeEEEEEEccCCCcccCHHHHHHHHHHHhcc-ccchhHHHHHHHHHHh-----CCCCeeeEeccchhhhhCcccccccC
Confidence 447799999999984 5666777766542210 0111110001111111 1122222221111100112222
Q ss_pred -CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC
Q psy612 538 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 538 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
.+..+.....+-...|..+++.+||++||++++++. -+++.++.+.. . .-++.++...+|+
T Consensus 89 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~~~---------~-----P~~a~~l~~~LGl 150 (391)
T PLN03173 89 PSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD---------M-----PGADYQLTKLLGL 150 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc---------c-----cHHHHHHHHHhCC
Confidence 334444444445557888999999999999887764 44455443211 1 1367889999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 617 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 617 ~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
+.- .+-+..+|++++.||..|.+.++++....+||.+++++... +..++.+ ..+.--.-..+|+|
T Consensus 151 ~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~----------~~~~~d~--~~~~~v~~~LFGDG 218 (391)
T PLN03173 151 RSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVT----------FRGPSDT--HLDSLVGQALFGDG 218 (391)
T ss_pred CccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhh----------hCCcccc--chhhhhhhhhhcCc
Confidence 873 45679999999999999999999999999999999973210 0111110 00111224668999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEE-------------eeeccCCCCCCC--CCCC--HHHHHHHHHHHHHHcCCCCCCc
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRG-------------SGINYDGKTNGI--TAPN--GISQTELIKSVYKKSNLNPEDI 756 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g-------------~~~~~dG~~~~~--~~p~--~~~q~~~i~~al~~agi~~~~I 756 (1005)
|+++||..-+.. .-..+.+.++.. +.+...|....+ ..|. ......++++.|++.|++++||
T Consensus 219 AaAvvl~~~~~~-~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di 297 (391)
T PLN03173 219 AAAIIIGSDPVL-GVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNS 297 (391)
T ss_pred eEEEEEeCCCCC-CcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 999999863211 001122222211 111111211001 1122 2234567889999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHH
Q psy612 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSL 812 (1005)
Q Consensus 757 ~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~l 812 (1005)
+++-.|=-|-+ =++++.+.++-...+ +... .+=...|++-+|+=..-|
T Consensus 298 ~~~v~Hqgg~~-----Il~~v~~~LgL~~ek---l~~s~~vl~~yGNtSSaSv~~vL 346 (391)
T PLN03173 298 LFWIAHPGGPA-----ILDQVEAKLALKPEK---LRATRHVLSEYGNMSSACVLFIL 346 (391)
T ss_pred CeEEECCCcHH-----HHHHHHHHcCCChHH---HHHHHHHHHHhCcchhhHHHHHH
Confidence 99999966554 445566665432111 1100 122345888777643333
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-06 Score=104.18 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=85.3
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcC--CcEEEEecCCCchH----HHHHHH---------Hh-CC--------CcEE
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKY--STNLILSGRSKLNS----IIYKKL---------KK-FN--------NKAI 120 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~G--a~~vil~~r~~~~~----~~~~~l---------~~-~g--------~~v~ 120 (1005)
+-.+++++||||+|-||..+++.|++.+ .++|+++.|..... .+..++ ++ .+ .++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 4578999999999999999999999764 34566666653221 111111 11 11 4789
Q ss_pred EEEecCCC-------HHHHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy612 121 YIQVDVSD-------KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTIL 193 (1005)
Q Consensus 121 ~~~~Dvtd-------~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~ 193 (1005)
++..|+++ .+.++.++ + .+|.|||+|+... . . +..+..+++|+.|+.++.+++..
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~----~---~vD~ViH~AA~v~-~---~----~~~~~~~~~Nv~gt~~ll~~a~~--- 149 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMW----K---EIDIVVNLAATTN-F---D----ERYDVALGINTLGALNVLNFAKK--- 149 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHH----h---CCCEEEECccccC-C---c----CCHHHHHHHHHHHHHHHHHHHHh---
Confidence 99999984 33333333 2 4899999998754 2 1 23567889999999999988532
Q ss_pred HHhcCCCcEEEEecCccc
Q psy612 194 KLQKNKLDFVCYFSSSSA 211 (1005)
Q Consensus 194 ~~~~~~~~~iV~~SSia~ 211 (1005)
......||++||...
T Consensus 150 ---~~~~k~~V~vST~~v 164 (491)
T PLN02996 150 ---CVKVKMLLHVSTAYV 164 (491)
T ss_pred ---cCCCCeEEEEeeeEE
Confidence 123567899888654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-06 Score=88.43 Aligned_cols=173 Identities=17% Similarity=0.120 Sum_probs=110.1
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
++|+||+|.+|+.+++.|.++|..+.+++++....++ ...+.++.+|+.|++++.+++. +.|.||
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi 65 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI 65 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence 6899999999999999999999766666555443222 4678999999999987776663 689999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC---------hhh
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS---------CDY 221 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~---------~~Y 221 (1005)
|++|... . + ...+.++.++ ++..+..++|++||........+. ..|
T Consensus 66 ~~~~~~~-~--------~---------~~~~~~~~~a-------~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~ 120 (183)
T PF13460_consen 66 HAAGPPP-K--------D---------VDAAKNIIEA-------AKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEY 120 (183)
T ss_dssp ECCHSTT-T--------H---------HHHHHHHHHH-------HHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHH
T ss_pred hhhhhhc-c--------c---------cccccccccc-------ccccccccceeeeccccCCCCCcccccccccchhhh
Confidence 9997654 2 0 3333344444 333456789999998765544442 245
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
...+...+.+. +..++ +++.+.++...+.. ... ...... ....+...++.++.++.+.+++.
T Consensus 121 ~~~~~~~e~~~---~~~~~------~~~ivrp~~~~~~~-~~~-~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 121 ARDKREAEEAL---RESGL------NWTIVRPGWIYGNP-SRS-YRLIKE-GGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp HHHHHHHHHHH---HHSTS------EEEEEEESEEEBTT-SSS-EEEESS-TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhcCC------CEEEEECcEeEeCC-Ccc-eeEEec-cCCCCcCcCCHHHHHHHHHHHhC
Confidence 55555444333 23343 88888876654432 110 000000 11223456888888888887764
|
... |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=7e-07 Score=99.97 Aligned_cols=129 Identities=14% Similarity=0.027 Sum_probs=91.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|=||..+++.|.++| .+ +.+.|... .+..|++|.+.+.++++.. ++|.|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V-~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V 58 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NL-IALDVHST----------------DYCGDFSNPEGVAETVRKI-----RPDVI 58 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CE-EEeccccc----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999998 54 44444321 2357999999988877652 58999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------C
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------G 217 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------g 217 (1005)
||+|+... .. ..+.. -+..+.+|+.|+.+|.+++.. .. ..+|++||..- +|.. .
T Consensus 59 ih~Aa~~~-~~-~~~~~---~~~~~~~N~~~~~~l~~aa~~-------~g-~~~v~~Ss~~V-y~~~~~~p~~E~~~~~P 124 (299)
T PRK09987 59 VNAAAHTA-VD-KAESE---PEFAQLLNATSVEAIAKAANE-------VG-AWVVHYSTDYV-FPGTGDIPWQETDATAP 124 (299)
T ss_pred EECCccCC-cc-hhhcC---HHHHHHHHHHHHHHHHHHHHH-------cC-CeEEEEccceE-ECCCCCCCcCCCCCCCC
Confidence 99998754 21 11112 244567899999999998532 12 36888888543 2211 1
Q ss_pred ChhhhHHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~ 235 (1005)
...|+.+|...+.+++..
T Consensus 125 ~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 125 LNVYGETKLAGEKALQEH 142 (299)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 246999999999887654
|
|
| >TIGR00517 acyl_carrier acyl carrier protein | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-07 Score=82.55 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
+...+++.+++.+++++++|+++.+| .++|+||+..++|...|+++||++++...+.+..|+.++++|+.+
T Consensus 4 i~~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~ 75 (77)
T TIGR00517 4 IFEKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEE 75 (77)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHh
Confidence 56789999999999999999999998 579999999999999999999999999999999999999999965
|
S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-06 Score=102.06 Aligned_cols=142 Identities=18% Similarity=0.215 Sum_probs=96.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++.+|||||+|-||..++++|.++|..++++.+..... +.....+ ...++.++..|+.++. + ..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence 568899999999999999999999998766654322211 1111111 1235777889987752 1 14
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+|+... ... ...+ -...+++|+.|+.++.+++.. .+ ..||++||...+ |..
T Consensus 184 ~D~ViHlAa~~~-~~~-~~~~---p~~~~~~Nv~gt~nLleaa~~-------~g-~r~V~~SS~~VY-g~~~~~p~~E~~ 249 (442)
T PLN02206 184 VDQIYHLACPAS-PVH-YKFN---PVKTIKTNVVGTLNMLGLAKR-------VG-ARFLLTSTSEVY-GDPLQHPQVETY 249 (442)
T ss_pred CCEEEEeeeecc-hhh-hhcC---HHHHHHHHHHHHHHHHHHHHH-------hC-CEEEEECChHHh-CCCCCCCCCccc
Confidence 899999998654 211 1112 346789999999999998642 12 368999997533 211
Q ss_pred --------CChhhhHHHHHHHHHHHHHH
Q psy612 217 --------GSCDYAMGNRFQTVYAKYLN 236 (1005)
Q Consensus 217 --------g~~~Yaaana~l~~la~~~~ 236 (1005)
....|+.+|...+.+++...
T Consensus 250 ~~~~~P~~~~s~Y~~SK~~aE~~~~~y~ 277 (442)
T PLN02206 250 WGNVNPIGVRSCYDEGKRTAETLTMDYH 277 (442)
T ss_pred cccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 13569999999999887643
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.8e-06 Score=98.72 Aligned_cols=158 Identities=13% Similarity=0.127 Sum_probs=102.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCC-CHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS-DKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvt-d~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||+|-||..++++|++++...|+.+.|+.. . ...+.. ...+.++.+|++ +.+.+.++++ .+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~--~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~d 70 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD--R-LGDLVN-HPRMHFFEGDITINKEWIEYHVK-------KCD 70 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH--H-HHHhcc-CCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence 469999999999999999999874344555555431 1 112211 235788899998 6655544332 589
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.|||+|+... .... . ++-...+++|+.|+.++.+++.. .. ..||++||... +|..
T Consensus 71 ~ViH~aa~~~-~~~~-~---~~p~~~~~~n~~~~~~ll~aa~~-------~~-~~~v~~SS~~v-yg~~~~~~~~ee~~~ 136 (347)
T PRK11908 71 VILPLVAIAT-PATY-V---KQPLRVFELDFEANLPIVRSAVK-------YG-KHLVFPSTSEV-YGMCPDEEFDPEASP 136 (347)
T ss_pred EEEECcccCC-hHHh-h---cCcHHHHHHHHHHHHHHHHHHHh-------cC-CeEEEEeccee-eccCCCcCcCccccc
Confidence 9999998754 2111 1 12245678999999999888532 22 57999999743 3310
Q ss_pred --------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCccc
Q psy612 217 --------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 --------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|.+.+.+++.... .++ +++.+-.+.+-
T Consensus 137 ~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~ilR~~~v~ 180 (347)
T PRK11908 137 LVYGPINKPRWIYACSKQLMDRVIWAYGMEEGL------NFTLFRPFNWI 180 (347)
T ss_pred cccCcCCCccchHHHHHHHHHHHHHHHHHHcCC------CeEEEeeeeee
Confidence 012599999999988876543 343 55666554443
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.8e-06 Score=99.64 Aligned_cols=302 Identities=13% Similarity=0.115 Sum_probs=166.5
Q ss_pred CcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccC----
Q psy612 463 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 537 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 537 (1005)
-+..|.|++-.+|.- ...+++++.+..=-+. ...|..+-.....+.. ..+..++....++...-++.|.
T Consensus 14 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 14 GPACVLGIGTAVPPAEFLQSEYPDFFFNITNC-GEKEALKAKFKRICDK-----SGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCeEEEEEeccCCCcccCHHHHHHHHHHhccc-cCcHHHHHHHHHHHHh-----cCCCeeeeeccccchhhCcccccccC
Confidence 457799999999984 5667777766542211 0111111001111111 1122222222111111112221
Q ss_pred -CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC
Q psy612 538 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 538 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
.+..+.....+-...|..+++.+||++||++++++. -++++++.+ +. . --++.+|...||+
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~~--------~-----Ps~a~~l~~~LGl 149 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSG-VN--------M-----PGADHALAKLLGL 149 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCC-CC--------C-----ccHHHHHHHHhCc
Confidence 234444444455567888999999999999988775 566665544 21 1 1257789999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 617 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 617 ~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
+.- .+-+..+|++++.||..|...|++|....+||.+++++.. .+. .++. ...|..-....+|+|
T Consensus 150 ~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~-----~~~-----~~~~--~~~~~~~~~~LFGDG 217 (389)
T PLN03168 150 KPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV-----TYR-----APSE--NHLDGLVGSALFGDG 217 (389)
T ss_pred CCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh-----hcc-----Cccc--ccHHHHhccccccCc
Confidence 863 5889999999999999999999999999999999997421 110 0000 001111235678999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEeee-c--cCCC------CCCC----CC--CC--HHHHHHHHHHHHHHcCCCCCCc
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSGI-N--YDGK------TNGI----TA--PN--GISQTELIKSVYKKSNLNPEDI 756 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~~-~--~dG~------~~~~----~~--p~--~~~q~~~i~~al~~agi~~~~I 756 (1005)
||++||+.-.... .+..++.+...... - .+|. ..++ .. |. ......++++++...|+...|+
T Consensus 218 AaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~ 296 (389)
T PLN03168 218 AGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNE 296 (389)
T ss_pred cEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 9999998632211 01234444332110 0 1111 0111 11 11 1233566777888888877788
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhh
Q psy612 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGL 809 (1005)
Q Consensus 757 ~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~ 809 (1005)
+++-.|=-|-+ =++++.+.++-... .+... .+=...|++-+|+=+
T Consensus 297 ~~~v~Hqgg~~-----Il~~v~~~Lgl~~e---k~~~s~~vl~~yGNtSSaSv~ 342 (389)
T PLN03168 297 MFWAVHPGGPA-----ILDQVEAKLKLTKD---KMQGSRDILSEFGNMSSASVL 342 (389)
T ss_pred ceEEecCCcHH-----HHHHHHHHcCCCHH---HHHHHHHHHHHhCccHhhhHH
Confidence 88889965554 34455555542211 11110 122355888777633
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.4e-06 Score=98.43 Aligned_cols=144 Identities=16% Similarity=0.145 Sum_probs=96.5
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+++||||+|-||+.+++.|.++|..+.++.++... ...+... .+.++.+|++|++++.++++ .+|.|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~----~~~l~~~--~v~~v~~Dl~d~~~l~~al~-------g~d~V 68 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK----ASFLKEW--GAELVYGDLSLPETLPPSFK-------GVTAI 68 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH----hhhHhhc--CCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence 58999999999999999999999765555544321 1222222 36788999999988776653 48999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
||+++... . + .....++|+.|+.++.+++ +.....+||++||..+. ..+...|..+|...+
T Consensus 69 i~~~~~~~-~------~---~~~~~~~~~~~~~~l~~aa-------~~~gvkr~I~~Ss~~~~--~~~~~~~~~~K~~~e 129 (317)
T CHL00194 69 IDASTSRP-S------D---LYNAKQIDWDGKLALIEAA-------KAAKIKRFIFFSILNAE--QYPYIPLMKLKSDIE 129 (317)
T ss_pred EECCCCCC-C------C---ccchhhhhHHHHHHHHHHH-------HHcCCCEEEEecccccc--ccCCChHHHHHHHHH
Confidence 99876432 1 1 1224556788998888884 33356789999986432 123456778887766
Q ss_pred HHHHHHHhccccccCCceEEEEeCC
Q psy612 230 VYAKYLNNKNIYKKYTNKLITINWP 254 (1005)
Q Consensus 230 ~la~~~~~~g~~~~~~~~~~si~wg 254 (1005)
.+.+ ..++ +++.+..+
T Consensus 130 ~~l~---~~~l------~~tilRp~ 145 (317)
T CHL00194 130 QKLK---KSGI------PYTIFRLA 145 (317)
T ss_pred HHHH---HcCC------CeEEEeec
Confidence 5542 3333 66666554
|
|
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.4e-07 Score=80.30 Aligned_cols=74 Identities=18% Similarity=0.337 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcc-cccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSE-IYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~-i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..+...+...+...++..... ++.+.+|+++|+||++.++++.++++.|+++++...+|+++|+..|+.++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~~ 85 (86)
T smart00823 11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAAE 85 (86)
T ss_pred HHHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHHh
Confidence 345677889999999987666 48899999999999999999999999999999999999999999999998764
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=92.94 Aligned_cols=228 Identities=23% Similarity=0.316 Sum_probs=144.6
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHH-hCC--CCCcccccccchhHHHH
Q psy612 557 ESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYF-MDL--KGPVMAINTACSSSLVA 633 (1005)
Q Consensus 557 ~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~-~~l--~Gps~~v~taCsSsl~A 633 (1005)
+-...+|+-+++|..+.. |.+|.-... +. .....|++-+ -|+ +=|.++|+--|||+|.|
T Consensus 68 vl~a~ie~t~~dp~~igd----i~vG~vL~p------------g~--ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqa 129 (435)
T KOG1389|consen 68 VLRAVIEKTNLDPSLIGD----IVVGTVLAP------------GS--GASECRMAAFYAGFPETVPVRTVNRQCSSGLQA 129 (435)
T ss_pred HHHHHHhhcCCCHHHhcc----eeeeeccCC------------Cc--chHHHHHHHHHcCCCcccchhhhhhhhhhHHHH
Confidence 334456787887766543 444432110 11 1344566544 354 44999999999999999
Q ss_pred HHHHHHHHhcCCcCEEEEeecccCCCHH-----------------HHHHHHHcCCCC-----------------------
Q psy612 634 THIACQSLRQHECDTAISAGVNLMISPE-----------------AYIAMTSAGMLS----------------------- 673 (1005)
Q Consensus 634 l~~A~~~l~~G~~d~alvggv~~~~~~~-----------------~~~~~~~~~~ls----------------------- 673 (1005)
+..-...||+|..|+-|++|++.+.+-+ ...++--+|+.|
T Consensus 130 VadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~k 209 (435)
T KOG1389|consen 130 VADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHK 209 (435)
T ss_pred HHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHH
Confidence 9999999999999999999998765421 000111122222
Q ss_pred ------------------------CCCCC-----------c------------C-CCCCCCCce-------ecCccEEEE
Q psy612 674 ------------------------PDGKC-----------Y------------V-FDERANGLV-------PSEAVVAVV 698 (1005)
Q Consensus 674 ------------------------~~g~~-----------~------------p-fd~~a~G~~-------~gEGa~~vv 698 (1005)
+.|.- | | |-+ ||.. .++|+++|+
T Consensus 210 kAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkk--dGttTagNsSQvSDGa~aVL 287 (435)
T KOG1389|consen 210 KAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKK--DGTTTAGNSSQVSDGAGAVL 287 (435)
T ss_pred HHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhc--CCccccCchhhcccchhhhh
Confidence 11111 1 1 222 2322 489999999
Q ss_pred EcccchhhcCCCceEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q psy612 699 LKRLSRALSDGDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL 777 (1005)
Q Consensus 699 Lk~l~~A~~~g~~I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al 777 (1005)
|.+.+.|.+-|-+|+++.+.+++-- +-.-.| -+-.-+|-.+++.+|+..+||||+|.. |.-|-
T Consensus 288 LmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMG------iGPavAIp~alk~aGL~v~did~FEIN----------EAFAs 351 (435)
T KOG1389|consen 288 LMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMG------IGPAVAIPKALKAAGLEVDDIDLFEIN----------EAFAS 351 (435)
T ss_pred hhhhhhHhhcCCceeEEeeeeeeecCCHHHcC------CCchhhhHHHHHHcCCcccccceeehh----------HHHHH
Confidence 9999999999999999999886531 111122 122567899999999999999999985 54444
Q ss_pred HHHhccCCCC--CCce-eE-eccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 778 HDVFKNKTYN--QKFC-AI-TSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 778 ~~~~~~~~~~--~~~~-~i-gsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
+-+|+...-. ...+ +- |++ -+||+.+|+|.-.++-.+--|+++
T Consensus 352 Q~~yc~~KL~ld~ekVN~~GGai--AlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 352 QALYCRNKLGLDPEKVNVNGGAI--ALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred HHHHHHHHhCCCHHHcCCCCcee--eccCCcCCccHhHHHHHHHHHHhh
Confidence 4455421100 0000 01 111 279999999998888777777763
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.2e-07 Score=116.64 Aligned_cols=76 Identities=13% Similarity=0.298 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhCCC-CcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 335 KFIENDIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~-~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
..+.+.+++.++++|+.+ ++.|+++++|++||+|||++++|+++|++.||++|+.+.+|+|||+.+|++||.+.+.
T Consensus 544 ~~~~~~v~~~~a~vl~~~~~~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~~~ 620 (705)
T PRK06060 544 RLVVDAVCAEAAKMLGEPDPWSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAELA 620 (705)
T ss_pred HHHHHHHHHHHHHHhCCCChhhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHHhc
Confidence 345567889999999985 5679999999999999999999999999999999999999999999999999987653
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.7e-06 Score=88.72 Aligned_cols=176 Identities=16% Similarity=0.176 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
...|+.+++.+||+|||+++++++ -+|+|...+ ..+.++.++..++ =|.+-|.+||||
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID----~i~vGdL~n----------------Q~ipssfvar~LG--IP~~gV~gACST 111 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ----FFLAGDLMN----------------QITPTSFAARTLG--IPYLGLFGACST 111 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC----------------CcCcHHHHHHHhC--CCccceeecCHH
Confidence 457899999999999999988876 567765431 1233446667777 577999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
+..||++|...|++|.+|.+||+-.+-.-+.+..+-| =-.-|.-||..+ .=+|- |+|++||.+. .++
T Consensus 112 g~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~-----P~eyG~Qrp~ta--qwTvT--gaga~~l~~~----~~~ 178 (334)
T PRK12404 112 SMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY-----PTEYGGQKPPTA--QWTVT--GAGAAILSKT----GDG 178 (334)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC-----cccccCcCCCcc--cEEEE--ceEEEEEecC----CCC
Confidence 9999999999999999999999998876665543322 111234455432 33344 5666666542 234
Q ss_pred CceEEEEEEeeeccCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 710 DPIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~~~~~~~p~------~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
-+|-++=-|--+- .|+..|+ .++-...|.+=+++.|.+|+|-|.|-+-.-|
T Consensus 179 ~~i~~~T~Gkv~D-----~g~~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg 235 (334)
T PRK12404 179 PRVTSATIGRVVD-----MGLTDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG 235 (334)
T ss_pred ceEEEEEEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence 4454332332221 2334443 3456778999999999999999999875444
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.9e-06 Score=105.76 Aligned_cols=160 Identities=18% Similarity=0.146 Sum_probs=103.4
Q ss_pred EEEEECChhHHHHHHHHHHHH--cCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHH--HHHHHHHHHhhcC
Q psy612 70 TYLITGGTGRLGMLFSDYLIN--KYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLK--MISEINSIINNIG 144 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~--~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~--v~~~~~~i~~~~g 144 (1005)
++|||||+|-||..+++.|++ +|..++++ .|+.............+ .++.++.+|++|++. ....++.+ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVL-VRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEE-ECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 689999999999999999994 66654444 45433232222222222 468899999999531 01122222 3
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------- 216 (1005)
.+|.|||+|+... .. .+ .....++|+.|+.++.+++. ......||++||....-...
T Consensus 77 ~~D~Vih~Aa~~~-~~----~~---~~~~~~~nv~gt~~ll~~a~-------~~~~~~~v~~SS~~v~g~~~~~~~e~~~ 141 (657)
T PRK07201 77 DIDHVVHLAAIYD-LT----AD---EEAQRAANVDGTRNVVELAE-------RLQAATFHHVSSIAVAGDYEGVFREDDF 141 (657)
T ss_pred CCCEEEECceeec-CC----CC---HHHHHHHHhHHHHHHHHHHH-------hcCCCeEEEEeccccccCccCccccccc
Confidence 7999999999754 21 12 24466889999999998853 22356799999976531111
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|...+.+.+. ..++ +++.+..+.+-
T Consensus 142 ~~~~~~~~~Y~~sK~~~E~~~~~--~~g~------~~~ilRp~~v~ 179 (657)
T PRK07201 142 DEGQGLPTPYHRTKFEAEKLVRE--ECGL------PWRVYRPAVVV 179 (657)
T ss_pred hhhcCCCCchHHHHHHHHHHHHH--cCCC------cEEEEcCCeee
Confidence 124599999999888753 2233 67777766553
|
|
| >PRK07081 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=5e-07 Score=80.27 Aligned_cols=73 Identities=11% Similarity=0.284 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhC--CCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCcccccc--CCCHHHHHHHHHHhhh
Q psy612 338 ENDIKNHICNILN--TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIKNHN 410 (1005)
Q Consensus 338 ~~~l~~~ia~~L~--~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~--~~Ti~~La~~l~~~~~ 410 (1005)
++.|++++.+.++ +++++++.+.+|+++|+||+.+++|...|+++||++++...+.. ..||..|++++.+...
T Consensus 2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~~ 78 (83)
T PRK07081 2 KNTIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQD 78 (83)
T ss_pred hHHHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHHh
Confidence 3567888888754 46678999999999999999999999999999999999998875 8999999999987654
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.6e-06 Score=98.04 Aligned_cols=145 Identities=19% Similarity=0.205 Sum_probs=96.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++..++|||||+|-||..++++|.++|..++++.+...........+.. ..++.++..|+.+.. ...
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~------------~~~ 184 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI------------LLE 184 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc------------ccC
Confidence 3457899999999999999999999998766655432211111111111 135778888987642 125
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+|+... .... ..+ -...+++|+.|+.++.+++... . ..||++||... +|.+
T Consensus 185 ~D~ViHlAa~~~-~~~~-~~~---p~~~~~~Nv~gT~nLleaa~~~-------g-~r~V~~SS~~V-Yg~~~~~p~~E~~ 250 (436)
T PLN02166 185 VDQIYHLACPAS-PVHY-KYN---PVKTIKTNVMGTLNMLGLAKRV-------G-ARFLLTSTSEV-YGDPLEHPQKETY 250 (436)
T ss_pred CCEEEECceecc-chhh-ccC---HHHHHHHHHHHHHHHHHHHHHh-------C-CEEEEECcHHH-hCCCCCCCCCccc
Confidence 899999998654 2111 112 2467889999999999886431 2 36889988642 3321
Q ss_pred --------CChhhhHHHHHHHHHHHHHHh
Q psy612 217 --------GSCDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 217 --------g~~~Yaaana~l~~la~~~~~ 237 (1005)
....|+.+|...+.+++....
T Consensus 251 ~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~ 279 (436)
T PLN02166 251 WGNVNPIGERSCYDEGKRTAETLAMDYHR 279 (436)
T ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 134699999999998876543
|
|
| >PRK07117 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.7e-07 Score=78.38 Aligned_cols=74 Identities=20% Similarity=0.235 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNIL-NTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L-~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+.+++.+++.+ ++++++|.++.+|.+||+|||-.+++...++++||+++|...+-+-.|+++++.||.++
T Consensus 4 ~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~~ 78 (79)
T PRK07117 4 QRIFDILVRHIREVLPDLDQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYAK 78 (79)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHHh
Confidence 346678999999999 79999999999999999999999999999999999999999999999999999999764
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4e-06 Score=104.32 Aligned_cols=104 Identities=22% Similarity=0.266 Sum_probs=78.3
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.++||||+|.||..+++.|+++|..++++. |+... .+ ...+.++.+|++|.+++.++++ .+|.|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~-R~~~~-----~~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V 65 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIA-RHRPD-----SW---PSSADFIAADIRDATAVESAMT-------GADVV 65 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEE-CCchh-----hc---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 589999999999999999999998665554 43211 01 1247789999999998877764 48999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
||+|+... . .+++|+.|+.++.+++ .....++||++||..
T Consensus 66 VHlAa~~~-~-------------~~~vNv~GT~nLLeAa-------~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 66 AHCAWVRG-R-------------NDHINIDGTANVLKAM-------AETGTGRIVFTSSGH 105 (854)
T ss_pred EECCCccc-c-------------hHHHHHHHHHHHHHHH-------HHcCCCeEEEECCcH
Confidence 99998643 1 3578999999888774 233456899999963
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.7e-06 Score=87.26 Aligned_cols=84 Identities=19% Similarity=0.156 Sum_probs=65.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+++||||+ |+|.++++.|+++|++++++.++.+..+.+...+.. +.++.++.+|++|++++.++++.+.+.+|++|.+
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 58999998 788889999999999776665443333333333432 4578889999999999999999999999999999
Q ss_pred EEcCcc
Q psy612 150 LHIAGI 155 (1005)
Q Consensus 150 Ih~AG~ 155 (1005)
|+..-+
T Consensus 80 v~~vh~ 85 (177)
T PRK08309 80 VAWIHS 85 (177)
T ss_pred EEeccc
Confidence 986643
|
|
| >PRK05828 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.5e-06 Score=77.11 Aligned_cols=74 Identities=16% Similarity=0.118 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHH-HhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 336 FIENDIKNHICN-ILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 336 ~~~~~l~~~ia~-~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
.+.+.+++++++ .+.++.+++.++.+|.+||+|||-.++|...|+++||++++...+-+..|+.++.+|+....
T Consensus 5 eI~~~i~~ii~e~~~~~~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~~ 79 (84)
T PRK05828 5 EILLKIKEIAKKKNFAVTLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKELK 79 (84)
T ss_pred HHHHHHHHHHHHhccCCCcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 455678888887 58888899999999999999999999999999999999999999999999999999997644
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-06 Score=95.12 Aligned_cols=91 Identities=27% Similarity=0.379 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
+.|+-+++.++|+++|++++++. .|++|+...... ...++..++...|| +-|.++|+.+|+
T Consensus 27 ~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~~-------------g~~~ar~~~l~aGl~~~vp~~~V~~~Ca 89 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEGE-------------GQNIARQAALAAGLPESVPATTVNRACA 89 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCTT-------------TCHHHHHHHHHTTS-TTSEEEEEE-GGG
T ss_pred HHHHHHHHHHHHHhcccchhhhh----hcCccccccccc-------------chhhhhhhhhhcccccccceeeehhhhh
Confidence 46778899999999999988776 688887543211 12345556666777 349999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMI 658 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~ 658 (1005)
||+.||++|++.|++|+.|++||||++.+.
T Consensus 90 SG~~Av~~a~~~I~sG~~dvvlagGvE~mS 119 (264)
T PF00108_consen 90 SGLQAVHLAAMAIASGEADVVLAGGVESMS 119 (264)
T ss_dssp HHHHHHHHHHHHHHTTS-SEEEEEEEEETT
T ss_pred HHHHHHHHhhhhhcCCCccEEEEecccccc
Confidence 999999999999999999999999999743
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.4e-05 Score=88.68 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=110.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCc---hHHHHHHHH-------hCCCcEEEEEecCCCHH-HH-HHH
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKL---NSIIYKKLK-------KFNNKAIYIQVDVSDKL-KM-ISE 135 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~---~~~~~~~l~-------~~g~~v~~~~~Dvtd~~-~v-~~~ 135 (1005)
+++++|||+|=||.-+.+.|..+- ++++.+++.+.. .+++.+.+. ....+|..+..|++.+. .+ +.-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 478999999999977777766654 455555555432 122222222 22568999999998543 01 111
Q ss_pred HHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy612 136 INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 215 (1005)
Q Consensus 136 ~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~ 215 (1005)
.+.+.+ .+|.|||||....... .+.+...+||.|+..+.+.+. ..+...+.++||++-.-..
T Consensus 81 ~~~La~---~vD~I~H~gA~Vn~v~--------pYs~L~~~NVlGT~evlrLa~-------~gk~Kp~~yVSsisv~~~~ 142 (382)
T COG3320 81 WQELAE---NVDLIIHNAALVNHVF--------PYSELRGANVLGTAEVLRLAA-------TGKPKPLHYVSSISVGETE 142 (382)
T ss_pred HHHHhh---hcceEEecchhhcccC--------cHHHhcCcchHhHHHHHHHHh-------cCCCceeEEEeeeeecccc
Confidence 222222 4999999998765222 255678899999999999853 3456779999998754221
Q ss_pred C--------------------CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 216 F--------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 216 ~--------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
. -.+.|+-+|.+.+-+++.-...|+ ++..+-+|...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGL------pv~I~Rpg~I~ 198 (382)
T COG3320 143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGL------PVTIFRPGYIT 198 (382)
T ss_pred ccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCC------CeEEEecCeee
Confidence 1 125699999999999998877777 77788777664
|
|
| >PRK08172 putative acyl carrier protein IacP; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-06 Score=76.91 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+.+.+++.+++.|++++++|.++.+| .++|+|||..++|...|+++||++++..++.+-.|+.++++|+.++..
T Consensus 5 i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~~~ 79 (82)
T PRK08172 5 IEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSLE 79 (82)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHHh
Confidence 56779999999999999999999999 889999999999999999999999999999999999999999987654
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=9.7e-06 Score=90.93 Aligned_cols=168 Identities=15% Similarity=0.146 Sum_probs=115.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+..++|||||+|=||+.+++.|.+++ ...+.+.........+..+.. .....+.++.+|+.|...+.+.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence 56799999999999999999999998 555655555443222222211 135678999999999877765553
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------- 217 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g------- 217 (1005)
+. .|||+|.... +.... .+-+..+++|+.|+.++.+++.. ....++|+.||..-.+++.-
T Consensus 76 ~~-~Vvh~aa~~~-~~~~~----~~~~~~~~vNV~gT~nvi~~c~~-------~~v~~lIYtSs~~Vvf~g~~~~n~~E~ 142 (361)
T KOG1430|consen 76 GA-VVVHCAASPV-PDFVE----NDRDLAMRVNVNGTLNVIEACKE-------LGVKRLIYTSSAYVVFGGEPIINGDES 142 (361)
T ss_pred Cc-eEEEeccccC-ccccc----cchhhheeecchhHHHHHHHHHH-------hCCCEEEEecCceEEeCCeecccCCCC
Confidence 34 6777775543 22222 24567899999999999988643 36789999999876654321
Q ss_pred -------ChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 218 -------SCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 218 -------~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
...|+.+|+--+.+....+. ..+ .+.++-.+.+-+.|
T Consensus 143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l------~T~aLR~~~IYGpg 187 (361)
T KOG1430|consen 143 LPYPLKHIDPYGESKALAEKLVLEANGSDDL------YTCALRPPGIYGPG 187 (361)
T ss_pred CCCccccccccchHHHHHHHHHHHhcCCCCe------eEEEEccccccCCC
Confidence 23799999988888876653 222 56677666554433
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.6e-05 Score=86.96 Aligned_cols=186 Identities=12% Similarity=0.034 Sum_probs=140.6
Q ss_pred CCEEEEECC-hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy612 68 GGTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG- 144 (1005)
Q Consensus 68 ~~~~lITGg-~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g- 144 (1005)
..++||.|. .--|++.+|.-|-++|.-+++++...+. .+.++.. ...+.....|..++..+...+.++.+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed----~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~ 78 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAED----EKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSR 78 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHH----HHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence 468899996 7899999999999999976666655432 2223322 34577888888777776666666554333
Q ss_pred -------------CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy612 145 -------------PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 211 (1005)
Q Consensus 145 -------------~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~ 211 (1005)
.+.+||..-....+.+++++++.++|.+.++.++.-.+...+.++|+|+.....+...|++.-|+.+
T Consensus 79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s 158 (299)
T PF08643_consen 79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence 4667776555444578899999999999999999999999999999976422245556667778989
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 212 ILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 212 ~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
.+..|-.+.-+...+++.+|.+.++++.. ..+++++-|+.|...=+
T Consensus 159 sl~~PfhspE~~~~~al~~~~~~LrrEl~--~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 159 SLNPPFHSPESIVSSALSSFFTSLRRELR--PHNIDVTQIKLGNLDIG 204 (299)
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHhh--hcCCceEEEEeeeeccc
Confidence 99999999999999999999998888743 45578899998887544
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=87.60 Aligned_cols=126 Identities=18% Similarity=0.172 Sum_probs=96.4
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+||||++|=+|.++++.|. +...++.+.|.+ +|++|++.+.+++++. ++|.||
T Consensus 3 iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvVI 55 (281)
T COG1091 3 ILITGANGQLGTELRRALP--GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVVI 55 (281)
T ss_pred EEEEcCCChHHHHHHHHhC--CCceEEeccCcc--------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence 8999999999999999998 333455444432 8999999999999876 799999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------Ch
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------SC 219 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-----------~~ 219 (1005)
|+|.....+ .-+.+-+..+.+|..|+.++.+++.. -+..+|++|+-.-+-|..+ ..
T Consensus 56 n~AAyt~vD-----~aE~~~e~A~~vNa~~~~~lA~aa~~--------~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n 122 (281)
T COG1091 56 NAAAYTAVD-----KAESEPELAFAVNATGAENLARAAAE--------VGARLVHISTDYVFDGEKGGPYKETDTPNPLN 122 (281)
T ss_pred ECccccccc-----cccCCHHHHHHhHHHHHHHHHHHHHH--------hCCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence 999886522 22333467899999999999999643 2456899998665545432 45
Q ss_pred hhhHHHHHHHHHHHHHH
Q psy612 220 DYAMGNRFQTVYAKYLN 236 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~ 236 (1005)
.|+.+|..-+...+...
T Consensus 123 vYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 123 VYGRSKLAGEEAVRAAG 139 (281)
T ss_pred hhhHHHHHHHHHHHHhC
Confidence 79999999888887654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.3e-06 Score=90.66 Aligned_cols=127 Identities=20% Similarity=0.184 Sum_probs=88.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+||||++|-||.++.+.|.++|.. ++.+.|. .+|++|.+++.+++... .+|.|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~-v~~~~r~--------------------~~dl~d~~~~~~~~~~~-----~pd~V 55 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYE-VIATSRS--------------------DLDLTDPEAVAKLLEAF-----KPDVV 55 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEE-EEEESTT--------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCE-EEEeCch--------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence 5899999999999999999998764 4444554 68999999999988775 58999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------C
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------S 218 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-----------~ 218 (1005)
||+|++.. .. . -.++-+..+.+|+.++.+|.+++.. ....+|++||..-+-|..+ .
T Consensus 56 in~aa~~~-~~-~---ce~~p~~a~~iN~~~~~~la~~~~~--------~~~~li~~STd~VFdG~~~~~y~E~d~~~P~ 122 (286)
T PF04321_consen 56 INCAAYTN-VD-A---CEKNPEEAYAINVDATKNLAEACKE--------RGARLIHISTDYVFDGDKGGPYTEDDPPNPL 122 (286)
T ss_dssp EE-------HH-H---HHHSHHHHHHHHTHHHHHHHHHHHH--------CT-EEEEEEEGGGS-SSTSSSB-TTS----S
T ss_pred eccceeec-HH-h---hhhChhhhHHHhhHHHHHHHHHHHH--------cCCcEEEeeccEEEcCCcccccccCCCCCCC
Confidence 99999865 11 1 1223456889999999999998642 2457999999754444322 3
Q ss_pred hhhhHHHHHHHHHHHHH
Q psy612 219 CDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~ 235 (1005)
..|+-+|...+...+..
T Consensus 123 ~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 123 NVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 57999999888877653
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-05 Score=89.87 Aligned_cols=130 Identities=16% Similarity=0.238 Sum_probs=85.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+.+|||||+|-||..+++.|.++|..+++. ..|++|.+.+...++.. ++|
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~------------------------~~~~~~~~~v~~~l~~~-----~~D 59 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG------------------------SGRLENRASLEADIDAV-----KPT 59 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEe------------------------cCccCCHHHHHHHHHhc-----CCC
Confidence 4679999999999999999999998765422 13455655555555432 589
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc--ccc-------C----
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS--AIL-------G---- 214 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia--~~~-------g---- 214 (1005)
.|||+||... .... +...++-...+++|+.|+.+|.+++.. ....+ +++||.. +.. +
T Consensus 60 ~ViH~Aa~~~-~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~-------~gv~~-v~~sS~~vy~~~~~~p~~~~~~~~ 129 (298)
T PLN02778 60 HVFNAAGVTG-RPNV-DWCESHKVETIRANVVGTLTLADVCRE-------RGLVL-TNYATGCIFEYDDAHPLGSGIGFK 129 (298)
T ss_pred EEEECCcccC-CCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCE-EEEecceEeCCCCCCCcccCCCCC
Confidence 9999999764 2111 111223356889999999999999643 13334 4455432 110 0
Q ss_pred -----CCCChhhhHHHHHHHHHHHHHH
Q psy612 215 -----DFGSCDYAMGNRFQTVYAKYLN 236 (1005)
Q Consensus 215 -----~~g~~~Yaaana~l~~la~~~~ 236 (1005)
.+....|+.+|.+.+.+++...
T Consensus 130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 130 EEDTPNFTGSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred cCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence 0112579999999999887543
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=97.17 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=85.5
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCC--cEEEEecCCCchHHHHHHH-------------Hh-C--------CCcEE
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKL-------------KK-F--------NNKAI 120 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga--~~vil~~r~~~~~~~~~~l-------------~~-~--------g~~v~ 120 (1005)
+-.+++++||||+|-||..+++.|++.+. ++|+++.|........+.+ ++ . ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 44799999999999999999999998753 4566666643222111111 11 1 24688
Q ss_pred EEEecCCCHH-----HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q psy612 121 YIQVDVSDKL-----KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL 195 (1005)
Q Consensus 121 ~~~~Dvtd~~-----~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~ 195 (1005)
.+..|++++. +.. +.+.+ .+|.|||+|+... . . +.++..+++|+.|+.++.+++..
T Consensus 196 ~v~GDl~d~~LGLs~~~~---~~L~~---~vDiVIH~AA~v~-f---~----~~~~~a~~vNV~GT~nLLelA~~----- 256 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLA---DEIAK---EVDVIINSAANTT-F---D----ERYDVAIDINTRGPCHLMSFAKK----- 256 (605)
T ss_pred EEEeeCCCcccCCCHHHH---HHHHh---cCCEEEECccccc-c---c----cCHHHHHHHHHHHHHHHHHHHHH-----
Confidence 9999999972 222 22222 4999999998754 1 1 34667889999999999998532
Q ss_pred hcCCCcEEEEecCcc
Q psy612 196 QKNKLDFVCYFSSSS 210 (1005)
Q Consensus 196 ~~~~~~~iV~~SSia 210 (1005)
......||++||..
T Consensus 257 -~~~lk~fV~vSTay 270 (605)
T PLN02503 257 -CKKLKLFLQVSTAY 270 (605)
T ss_pred -cCCCCeEEEccCce
Confidence 12356788888753
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.1e-05 Score=88.14 Aligned_cols=220 Identities=10% Similarity=0.076 Sum_probs=139.1
Q ss_pred ccCCCEEEEECCh-hHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHH----HhCCCcEEEEEecCCCHHHHHHHHHH
Q psy612 65 IKQGGTYLITGGT-GRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKL----KKFNNKAIYIQVDVSDKLKMISEINS 138 (1005)
Q Consensus 65 ~~~~~~~lITGg~-gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l----~~~g~~v~~~~~Dvtd~~~v~~~~~~ 138 (1005)
.-.++++||||++ |.||.+++..|+..|+++|+.++|-.. ..+..+.| ...|....++.++.++..+|..+++.
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew 472 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW 472 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence 3468899999986 789999999999999999999888643 22333333 23467888999999999999999999
Q ss_pred HHhhcC--------------CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc-CC---C
Q psy612 139 IINNIG--------------PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK-NK---L 200 (1005)
Q Consensus 139 i~~~~g--------------~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~-~~---~ 200 (1005)
|..+-- .++.+|-.|.... .+.+.+.... -+..+++-+.....|+-.+.+ ... +. .
T Consensus 473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl~~----~~s~r~v~~R 546 (866)
T COG4982 473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGLKK----QGSSRGVDTR 546 (866)
T ss_pred hccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHhhh----hccccCcccc
Confidence 964321 2567777776554 4455554321 112222223333333322221 111 11 1
Q ss_pred cEEEEe-cCcccccCCCCChhhhHHHHHHHHHHHHHHhcc-ccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC
Q psy612 201 DFVCYF-SSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKN-IYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ 278 (1005)
Q Consensus 201 ~~iV~~-SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g-~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~ 278 (1005)
-++|+= |---|.+|+ -..|+-+|.+||++...+.++. +.......---|.|. .++|++..++.... ..+..|+
T Consensus 547 ~hVVLPgSPNrG~FGg--DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWt--rGTGLMg~Ndiiv~-aiEk~GV 621 (866)
T COG4982 547 LHVVLPGSPNRGMFGG--DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWT--RGTGLMGHNDIIVA-AIEKAGV 621 (866)
T ss_pred eEEEecCCCCCCccCC--CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeee--ccccccCCcchhHH-HHHHhCc
Confidence 234443 334455653 4579999999999887776653 322222222346664 67787665554433 4567899
Q ss_pred CCCCHHHHHHHHHHHHh
Q psy612 279 KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 279 ~~l~~~~~~~~l~~~l~ 295 (1005)
+..+++|....|..++.
T Consensus 622 ~tyS~~EmA~~LLgL~s 638 (866)
T COG4982 622 RTYSTDEMAFNLLGLAS 638 (866)
T ss_pred eecCHHHHHHHHHhhcc
Confidence 99999998877766543
|
|
| >COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-06 Score=75.20 Aligned_cols=73 Identities=25% Similarity=0.389 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
.+...+++.+.+.|+.+..++..+..|. +||+|||.+++|.-.|+++||+++|...+....|+++++.|+.+.
T Consensus 5 ~~~~~i~~ii~e~l~~~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~~ 78 (80)
T COG0236 5 AIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEEL 78 (80)
T ss_pred HHHHHHHHHHHHHhCCchhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHHh
Confidence 3567899999999999988899999998 599999999999999999999999999999999999999999764
|
|
| >PRK07639 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.2e-06 Score=73.77 Aligned_cols=74 Identities=12% Similarity=0.161 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHhCCCC-cccccCCchhh-cCCchHHHHHHHHHHHhhcCcccCcccc--ccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKK-SEIYKNKNLAD-YGFDSISLAEFSRILSKFYSLDIMPSIF--FSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~-~~i~~~~~l~e-lG~DSL~a~el~~~l~~~~g~~l~~~~l--f~~~Ti~~La~~l~~~ 408 (1005)
+.+...|++++++.++++. +++.++.+|.+ +|+||+.+++|...|+++||++++...+ -.-.|++.+++|+.++
T Consensus 4 ~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T PRK07639 4 EALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEEL 81 (86)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHHh
Confidence 3456789999999999975 78999999955 9999999999999999999999998876 3677999999999764
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.9e-05 Score=82.38 Aligned_cols=214 Identities=21% Similarity=0.277 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCccccc--ccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAIN--TACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~--taCs 628 (1005)
.-+.++++..+|..+++++..+. .|++|++.+.+... ..+..|+..||+.--..+.| -||-
T Consensus 52 vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~K-------------~~at~v~~~lg~~~~~~~~d~~~AC~ 114 (377)
T COG3425 52 VTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAVK-------------PTATIVAEALGLNPSARAADVEFACY 114 (377)
T ss_pred HHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCccccc-------------chHHHHHHHhCCCCceehhhHHHHHH
Confidence 36789999999999998876654 68899877654432 25667888899887666654 5999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
++..||++|..++.+|..+-+||.|.+..... +. ++-=+.-|.|++++|+.+
T Consensus 115 agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------~~--------~~~E~t~GAGavA~lIg~------- 166 (377)
T COG3425 115 AGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------PG--------DALEYTAGAGAVAFLIGK------- 166 (377)
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------CC--------cccCccCCCceEEEEEcc-------
Confidence 99999999999999999999999999973210 10 011234578888888863
Q ss_pred CCceEEEEEEeeec-cCC----CCCCCCCCC----------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 709 GDPIHAIIRGSGIN-YDG----KTNGITAPN----------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 709 g~~I~avI~g~~~~-~dG----~~~~~~~p~----------~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
+.++.+++.+.+.- .|- |..+.+.|. -...+.+.+...++.|++|+|.+|+-.|-.-+++.
T Consensus 167 n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~---- 242 (377)
T COG3425 167 NPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFP---- 242 (377)
T ss_pred CCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchH----
Confidence 24566666554432 221 111222232 13345566677788999999999999999888743
Q ss_pred HHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHH
Q psy612 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 816 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~ 816 (1005)
.++++...-.. .+.-+=-....++|.+.++|..++|++++
T Consensus 243 ~ka~k~l~~~~---e~v~~~l~~~~~vGN~YtgS~~L~Las~L 282 (377)
T COG3425 243 KKAAKSLGFKE---EQVKPGLVYPQRIGNTYTGSLLLGLASLL 282 (377)
T ss_pred HHHHHHhCccH---hhcCccchhhhhcCcccchhHHHHHHHHH
Confidence 34444443221 11001112334799999999999998875
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.5e-05 Score=89.80 Aligned_cols=256 Identities=15% Similarity=0.145 Sum_probs=150.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccc-
Q psy612 548 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN- 624 (1005)
Q Consensus 548 dpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~- 624 (1005)
.-.+..+..++.++|+++|+++++++ ++|-++...+ ..-.++.+|...+|+++ .++-+.
T Consensus 186 ~ea~~v~~~~~~~lL~kaGi~p~dID-----~LIv~cS~~~-------------p~PSlAa~I~n~LGlr~~i~afdLsg 247 (521)
T PLN02854 186 AEAEAVMFGALDSLFSKTGVKPRDIG-----ILIVNCSLFN-------------PTPSLSAMIVNHYKLRTDIKSYNLGG 247 (521)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC-------------CCCCHHHHHHHHhCCCCCceEEeccc
Confidence 33445666788899999999887764 4442332221 01236778889999984 567787
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC---CceecCccEEEEEcc
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN---GLVPSEAVVAVVLKR 701 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~---G~~~gEGa~~vvLk~ 701 (1005)
.+||+++.||+.|.+.|+.|....|||.+++.+. ...+. | +.... -..+|.|+|++||.+
T Consensus 248 mGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~~y~-----------g-----~Drs~lv~~~LFgDGAAAvlLs~ 310 (521)
T PLN02854 248 MGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LNWYF-----------G-----NDRSMLLCNCIFRMGGAAVLLSN 310 (521)
T ss_pred chhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cCCCC-----------C-----CchhhhcceeeeccceeEEEEec
Confidence 7999999999999999999999999999999743 11000 0 11112 356799999999986
Q ss_pred cchhh-cCCCceEEEEEEeeeccC--------------CC-CCCCC--CCCH--HH---------------------HHH
Q psy612 702 LSRAL-SDGDPIHAIIRGSGINYD--------------GK-TNGIT--APNG--IS---------------------QTE 740 (1005)
Q Consensus 702 l~~A~-~~g~~I~avI~g~~~~~d--------------G~-~~~~~--~p~~--~~---------------------q~~ 740 (1005)
-+... +..-++...++- ....| |. ...+. .|.. .. ...
T Consensus 311 ~~~~~~~~k~~L~~~v~t-~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~ 389 (521)
T PLN02854 311 KARDRKRSKYQLVHTVRT-HKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVT 389 (521)
T ss_pred ccccccccchheeeEEEE-EEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHH
Confidence 32110 001122222221 11111 11 00000 0110 00 134
Q ss_pred HHHHHHHHcCCCC------CCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHH
Q psy612 741 LIKSVYKKSNLNP------EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 814 (1005)
Q Consensus 741 ~i~~al~~agi~~------~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik 814 (1005)
++++.|.++|+.+ .+|+++-.|--|.. =++++.+.++-...+.. +.-.+=...|++-+||=...|-.
T Consensus 390 ~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~-----IId~v~k~LgL~~~~~e--~sr~tL~rfGNTSSASI~~~L~~ 462 (521)
T PLN02854 390 LVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRA-----VLDELQKNLQLSDWHME--PSRMTLHRFGNTSSSSLWYELAY 462 (521)
T ss_pred HHHHHHHHcCCCccCCcccccCcEEEECCCCHH-----HHHHHHHHcCCCccccc--chHHHhhhcCChHhhHHHHHHHH
Confidence 6788899999987 69999999976654 34455565553211111 11122234688887764444333
Q ss_pred HHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 815 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 815 ~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
.. +.|.+. +..+...-+||.|=+-..+|++-.
T Consensus 463 ~~---~kGrik---------------------------------~GD~Vl~iaFGsGft~~sav~~~~ 494 (521)
T PLN02854 463 TE---AKGRVS---------------------------------AGDRVWQIAFGSGFKCNSAVWKAL 494 (521)
T ss_pred HH---HcCCCC---------------------------------CCCEEEEEEEchhhhhhheeeEEe
Confidence 31 222110 112346778999888888888754
|
|
| >TIGR02816 pfaB_fam PfaB family protein | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=93.99 Aligned_cols=148 Identities=11% Similarity=0.115 Sum_probs=92.9
Q ss_pred cccccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCC--
Q psy612 852 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN-- 929 (1005)
Q Consensus 852 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~-- 929 (1005)
.|-......|++.+|--+-+-++..+||.+...-. .+++ .... ....|++|+.++..|...+.+|...|..-+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (538)
T TIGR02816 3 YWFSEFHKARVAAINFNANGDQASSLVLTQASGLL--AAKS--LLNA-QRLFFILPGLNEIEISAQIEQLKQQLADLPVT 77 (538)
T ss_pred CCccCcccceeEEEeccCCCcceeeEEEecccccc--cchh--hcCh-hheEEEecCCcHHHHHHHHHHHHHHHhhcccc
Confidence 46555556788877754545556667877643221 1111 1111 224689999999999999999999988511
Q ss_pred ---CC------CHH----H--HHHHHHhcCCc----CCcEEEEEeCCHHHHHHHHHhhhcccccc---------------
Q psy612 930 ---TV------CIE----N--FVYTLMQGRHH----FQYRCAIIISSIEEVVKIINDTLNSKEKI--------------- 975 (1005)
Q Consensus 930 ---~~------~l~----~--~a~tl~~~r~~----~~~R~a~~~~~~~~l~~~l~~~~~~~~~~--------------- 975 (1005)
++ .|- | ..|-.++.|+. ..+-..+++.|.++|+++|+...++-.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (538)
T TIGR02816 78 EVNDLSLECNAALIAIMTDNLANADKDTSRDAKPAISLPQAVIQAASVSAAKQEISAINDALPALFAEKSNATSTNKGLI 157 (538)
T ss_pred ccccccccchHHHHHHHHHHHHHHhhccccccccccccceEEEEcCCHHHHHHHHHHHHHhHHHHhhccccccccccccc
Confidence 11 111 1 12333333331 35788899999999999988663332111
Q ss_pred --ccC--ccc------------cccccccccCccchHHHHHhhhc
Q psy612 976 --LHT--NYL------------KGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 976 --~~~--~~~------------~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
..| .+| .|+++|+|+|||+||+||||.||
T Consensus 158 ~~~~p~G~~f~~~p~~~~~~~~~~~vaFvFpGqGsqy~gMGr~L~ 202 (538)
T TIGR02816 158 HYKTPAGSCFSLAPLGSNNDNAKAGLAFVYPGVGTVYADMFNDFH 202 (538)
T ss_pred CCCCCCcceeecCcCccccCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 011 112 35899999999999999999998
|
The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis. |
| >COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.9e-06 Score=68.49 Aligned_cols=67 Identities=24% Similarity=0.333 Sum_probs=59.6
Q ss_pred HHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 341 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 341 l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
|++.+.++++-++++++++.+|..+|+|||.++.+..++++. |.+|+-.++.++|||.+=-+.|..+
T Consensus 3 Lr~~~~~Ll~e~~~~l~dqeNLi~~GLDSiR~M~L~~~wR~~-G~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 3 LREQIAELLGESVEELDDQENLIDYGLDSIRMMALLERWRKR-GADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred HHHHHHHHHcCChhhcCchhhHHHhchhHHHHHHHHHHHHHc-CCcccHHHHHhCccHHHHHHHHHhc
Confidence 668888899888999999999999999999999999999775 7789999999999999887766543
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=6.9e-05 Score=77.45 Aligned_cols=223 Identities=21% Similarity=0.270 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC------CCCccccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL------KGPVMAIN 624 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l------~Gps~~v~ 624 (1005)
..|-..++.-||..|++.++.++.--+|-.+.++...-+ ++...|| .-|..+|+
T Consensus 29 TdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIY--------------------l~RHvGL~~GvP~e~pALtiN 88 (396)
T KOG1391|consen 29 TDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIY--------------------LARHVGLRVGVPKETPALTIN 88 (396)
T ss_pred hhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceE--------------------eeeccccccCCcCccCceeeh
Confidence 345567888899999999888774333333333321111 1122222 23899999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCC-CHHH--------------------H--------------------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMI-SPEA--------------------Y-------------------- 663 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~-~~~~--------------------~-------------------- 663 (1005)
.-|-|+..++-.+|+.|.-|+.+++|+||++-+. .|+. |
T Consensus 89 RLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~ 168 (396)
T KOG1391|consen 89 RLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLA 168 (396)
T ss_pred hhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHHhh
Confidence 9999999999999999999999999999997432 1100 0
Q ss_pred ---------------------HHHHHcCCCC------------------CCCCCcC-------------CCCCCCCce--
Q psy612 664 ---------------------IAMTSAGMLS------------------PDGKCYV-------------FDERANGLV-- 689 (1005)
Q Consensus 664 ---------------------~~~~~~~~ls------------------~~g~~~p-------------fd~~a~G~~-- 689 (1005)
..-...|.+. -|.+.|| |. .||.+
T Consensus 169 ~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFk--KdG~VtA 246 (396)
T KOG1391|consen 169 VQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFK--KDGTVTA 246 (396)
T ss_pred hhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhc--cCCeeec
Confidence 0001111111 0122222 32 24444
Q ss_pred -----ecCccEEEEEcccchhhcCCCceEEEEEEeeec-cCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy612 690 -----PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN-YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 763 (1005)
Q Consensus 690 -----~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~-~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hg 763 (1005)
..+|+++|++...+.-.+.+-+.+|.|.++.+. .|-.-.|+ -| .-+|+.+|+.+|+...|||.||..-
T Consensus 247 GnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGI-GP-----vPAI~~vLKksGlkl~DiDl~EvNE 320 (396)
T KOG1391|consen 247 GNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGI-GP-----VPAISGVLKKSGLKLKDIDLVEVNE 320 (396)
T ss_pred cccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccc-cC-----cHHHHHHHHHcCCcccccceEEech
Confidence 478999999988776667788899999988654 33322232 22 3478899999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhh
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 809 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~ 809 (1005)
...+ ..-|..+.++-...+ +-|..--=-+||+.+|||.
T Consensus 321 AFAp-----Q~LAv~r~L~ld~sK---lNVNGGAIALGHPLgaSGs 358 (396)
T KOG1391|consen 321 AFAP-----QYLAVERSLDLDISK---LNVNGGAIALGHPLGASGS 358 (396)
T ss_pred hhch-----HHHHHHHhhCCChhh---ccccCceeeccCccccCcc
Confidence 5443 223444444322111 1111111136999999994
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.7e-05 Score=101.10 Aligned_cols=167 Identities=14% Similarity=0.148 Sum_probs=109.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC---CcEEEEecCCCchHHHHHHH----HhCC-------CcEEEEEecCCCHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY---STNLILSGRSKLNSIIYKKL----KKFN-------NKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G---a~~vil~~r~~~~~~~~~~l----~~~g-------~~v~~~~~Dvtd~~~v 132 (1005)
..++++|||++|.||..+++.|++++ ..+|+...|........+.+ ...+ .++.++.+|++++.--
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 45789999999999999999999987 34566656654333222222 2111 3688999999864200
Q ss_pred --HHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 133 --ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 133 --~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
...++.+. ..+|.|||||+... . ... +.....+|+.|+.++.+++. ..+...|+++||++
T Consensus 1050 l~~~~~~~l~---~~~d~iiH~Aa~~~-~----~~~---~~~~~~~nv~gt~~ll~~a~-------~~~~~~~v~vSS~~ 1111 (1389)
T TIGR03443 1050 LSDEKWSDLT---NEVDVIIHNGALVH-W----VYP---YSKLRDANVIGTINVLNLCA-------EGKAKQFSFVSSTS 1111 (1389)
T ss_pred cCHHHHHHHH---hcCCEEEECCcEec-C----ccC---HHHHHHhHHHHHHHHHHHHH-------hCCCceEEEEeCee
Confidence 11122222 36899999998654 1 112 33445679999999998853 22445799999975
Q ss_pred cccC--------------CC--------------CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 211 AILG--------------DF--------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 211 ~~~g--------------~~--------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
..-+ .. ....|+.+|...+.++......|+ +++.+..+...
T Consensus 1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~------~~~i~Rpg~v~ 1180 (1389)
T TIGR03443 1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGL------RGCIVRPGYVT 1180 (1389)
T ss_pred ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCC------CEEEECCCccc
Confidence 4311 00 123599999999998877655554 77777776664
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PTZ00171 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.2e-05 Score=78.96 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
.+.+.+.|++.+++.+++++++|+++.+|. ++|+|||-.++|...|+++||+++|..++-+-.|+.++++|+.++
T Consensus 68 ~~~v~~~l~eiiae~l~vd~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~Ipded~~~i~TV~dlvd~V~~~ 143 (148)
T PTZ00171 68 KEDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDHDAEKIKTVQDAIDYIEQN 143 (148)
T ss_pred HHHHHHHHHHHHHHHhCCCHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHHCCCHHHHHHHHHHH
Confidence 345677899999999999999999999985 999999999999999999999999999999999999999999764
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00081 Score=78.60 Aligned_cols=176 Identities=17% Similarity=0.179 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC----Cccccccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG----PVMAINTA 626 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G----ps~~v~ta 626 (1005)
.-|.++++..+|+++|+.++++. -|++|+..+.+.. ...+..|...|++-| .++-+..|
T Consensus 51 ~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS~~d~s-------------ps~a~~v~~lL~~lG~~~~~~fDi~~A 113 (454)
T TIGR01833 51 NSLCLTVVSKLMERYNIDYNQIG----RLEVGTETIIDKS-------------KSVKTVLMQLFEESGNTDVEGIDTTNA 113 (454)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCCC-------------CchHHHHHHHHHhcCCCCceEEecccc
Confidence 46789999999999999887765 5677776654421 124556666555434 46678899
Q ss_pred chhHHHHHHHHHHHHhcCCc--CEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccch
Q psy612 627 CSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~--d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~ 704 (1005)
|++++.||..|+..|++|.. +-|||.|.+..... ++.+.| ..|+|+++++|.+-..
T Consensus 114 C~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~--------------~~~~~~--------t~GaGAvAmLv~~~~~ 171 (454)
T TIGR01833 114 CYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYA--------------KGNARP--------TGGAGAVAMLIGPNAP 171 (454)
T ss_pred chhHHHHHHHHHHHHHcCCcCCCeEEEEEecccccc--------------CCCeee--------ccccceEEEEeccCcc
Confidence 99999999999999999974 99999999972211 111111 3499999999974332
Q ss_pred hhcCCCceEEEEEEeeeccCCC--CCCCCC--C------CHHHHHHHHHHHH-----------HHc----CCCCCCccEE
Q psy612 705 ALSDGDPIHAIIRGSGINYDGK--TNGITA--P------NGISQTELIKSVY-----------KKS----NLNPEDINYI 759 (1005)
Q Consensus 705 A~~~g~~I~avI~g~~~~~dG~--~~~~~~--p------~~~~q~~~i~~al-----------~~a----gi~~~~I~yv 759 (1005)
+.=+. .+.++.+.+.+. ...... | +...-.+++.++| +.+ +..++|++|+
T Consensus 172 -~~~~~----~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~~dfd~~ 246 (454)
T TIGR01833 172 -IVFER----GLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTLNDFDYM 246 (454)
T ss_pred -ceecC----ccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCHhHcCEE
Confidence 11111 123333333331 111111 1 2233445544444 223 5788999999
Q ss_pred EecCCCCCCCC
Q psy612 760 ITHGTGTKLGD 770 (1005)
Q Consensus 760 e~hgtgt~~gD 770 (1005)
-.|-.-++++-
T Consensus 247 ~fH~P~~km~~ 257 (454)
T TIGR01833 247 VFHSPYCKLVQ 257 (454)
T ss_pred eccCCcccHHH
Confidence 99998887553
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=97.98 E-value=6.9e-05 Score=83.17 Aligned_cols=98 Identities=23% Similarity=0.165 Sum_probs=63.1
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|.||..+++.|+++|..++++.++....... ... . ..|+.. . ...+.+..+|.||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~----~--~~~~~~-~-------~~~~~~~~~D~Vv 62 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT----KWE----G--YKPWAP-L-------AESEALEGADAVI 62 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc----cce----e--eecccc-c-------chhhhcCCCCEEE
Confidence 58999999999999999999997655555443322111 000 0 112222 1 1123345799999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHH
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE 189 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~ 189 (1005)
|+||..... ...+.+.....+++|+.++.++.+++.
T Consensus 63 h~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~ 98 (292)
T TIGR01777 63 NLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIA 98 (292)
T ss_pred ECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence 999864311 223445566788999999999998853
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.9e-05 Score=67.14 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCchhhcC-CchHHHHHHHHHHHhhcCcccCcccccc--CCCHHHHHHHHHH
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIK 407 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l~elG-~DSL~a~el~~~l~~~~g~~l~~~~lf~--~~Ti~~La~~l~~ 407 (1005)
+++.+++.+.+..+.+..++..+.+|++.| +||+-+++|...|+++||++++..++-. ..|+..|++|+.+
T Consensus 3 i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~~~f~Tv~~i~~~v~~ 76 (78)
T PRK05087 3 FKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDRDDWNTPNKIIAKVEE 76 (78)
T ss_pred HHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCHHhhcCHHHHHHHHHH
Confidence 456788888888888777788999999999 5999999999999999999999988887 8999999999865
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=1.6e-05 Score=107.73 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
.++..+.+.|+++|+++.++|+.+++|+++|+|||++++|.++|++.||++|+..++|++|||.+|+++|.+..
T Consensus 848 ~~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~ 921 (1389)
T TIGR03443 848 ETEREIRDLWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLK 921 (1389)
T ss_pred HHHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhh
Confidence 46778999999999997778999999999999999999999999999999999999999999999999996543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00016 Score=90.24 Aligned_cols=130 Identities=18% Similarity=0.285 Sum_probs=89.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+...+|||||+|=||..+++.|.++|..+. +...|++|.+.+..++... .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~------------------------~~~~~l~d~~~v~~~i~~~-----~p 429 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYE------------------------YGKGRLEDRSSLLADIRNV-----KP 429 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEE------------------------eeccccccHHHHHHHHHhh-----CC
Confidence 445799999999999999999999886431 2235788888887776553 58
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---------C---
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------G--- 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---------g--- 214 (1005)
|.|||+|+... ... .+...++-...+++|+.|+.+|.+++.. .... +|++||..-+- +
T Consensus 430 d~Vih~Aa~~~-~~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~-------~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~ 499 (668)
T PLN02260 430 THVFNAAGVTG-RPN-VDWCESHKVETIRANVVGTLTLADVCRE-------NGLL-MMNFATGCIFEYDAKHPEGSGIGF 499 (668)
T ss_pred CEEEECCcccC-CCC-CChHHhCHHHHHHHHhHHHHHHHHHHHH-------cCCe-EEEEcccceecCCcccccccCCCC
Confidence 99999998754 111 1222334467888999999999999643 2333 55666533111 0
Q ss_pred ------CCCChhhhHHHHHHHHHHHHH
Q psy612 215 ------DFGSCDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 215 ------~~g~~~Yaaana~l~~la~~~ 235 (1005)
.+....|+.+|.+.+.+++..
T Consensus 500 ~E~~~~~~~~~~Yg~sK~~~E~~~~~~ 526 (668)
T PLN02260 500 KEEDKPNFTGSFYSKTKAMVEELLREY 526 (668)
T ss_pred CcCCCCCCCCChhhHHHHHHHHHHHhh
Confidence 011257999999999988764
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.2e-05 Score=87.43 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=59.6
Q ss_pred CCCEEEEECC----------------hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg----------------~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
.++++||||| +|++|.++|+.|+++|+.++++.+... .+ ... .+..+|+++.+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~~--~~~~~dv~~~~ 255 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TPA--GVKRIDVESAQ 255 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CCC--CcEEEccCCHH
Confidence 6899999999 666999999999999998776655432 11 011 13468999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccC
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISG 157 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~ 157 (1005)
++.+.+. +.++.+|++|||||+..
T Consensus 256 ~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 256 EMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHH---HhcCCCCEEEEcccccc
Confidence 8877765 45789999999999865
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0004 Score=81.92 Aligned_cols=117 Identities=18% Similarity=0.235 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccc-c
Q psy612 549 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN-T 625 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~-t 625 (1005)
-...++.+++.+||+++|+++++++ +++-++.+.+ ..-.++.+|...||++. +++-+. .
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID-----~LVv~cS~~~-------------~~PSlaa~V~~~LGlr~~v~afdL~gm 232 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIG-----ILVVNCSLFN-------------PTPSLSAMIVNKYKLRGNIRSFNLGGM 232 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC-------------CCCcHHHHHHHHhCCCCCCeEEecccc
Confidence 3557888999999999999987764 3333333221 01236778888999986 788888 6
Q ss_pred cchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC----CceecCccEEEEEcc
Q psy612 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLKR 701 (1005)
Q Consensus 626 aCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~----G~~~gEGa~~vvLk~ 701 (1005)
+||+++.||++|.+.|++|....|||.+++.+.. ..+ ++.+.. ...+|.|+|++||..
T Consensus 233 GCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~-~~~-----------------~~d~~s~lv~n~LFgDGAaAvlLs~ 294 (502)
T PLN02377 233 GCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQ-NWY-----------------FGNKKSMLIPNCLFRVGGSAVLLSN 294 (502)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccc-ccC-----------------CCCCccccccceeeccccEEEEEec
Confidence 9999999999999999999999999999997332 110 111112 356799999999986
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00035 Score=81.90 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=89.9
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccc
Q psy612 546 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAI 623 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v 623 (1005)
..+-...++.+++.+||+++|++++++. -+++.++.+. ..-.++.+|...+|++. +++-+
T Consensus 144 ~~~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~--------------~~Pslaa~V~~~lGlr~~i~~fdL 205 (478)
T PLN02932 144 SRKETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN--------------PTPSLSSILVNKFKLRDNIKSLNL 205 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC--------------CCCcHHHHHHHHhCCCCCceEEEe
Confidence 3344567889999999999999987764 4445554331 11236778889999974 68888
Q ss_pred c-ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 624 N-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 624 ~-taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
. .|||+++.||..|.+.|++|....|||.+++.+. +..+.. +. +. ..-.-..+|.|++++||..-
T Consensus 206 ~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S-~~~~~~---------d~--r~--~l~t~~LFgDGAAAvlLs~~ 271 (478)
T PLN02932 206 GGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT-QNLYLG---------NN--KS--MLVTNCLFRIGGAAILLSNR 271 (478)
T ss_pred ccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc-cccCCC---------cc--hh--hhccceeecccceEEEEecc
Confidence 8 8999999999999999999999999999999733 221110 00 00 00124567999999999863
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00024 Score=78.91 Aligned_cols=75 Identities=23% Similarity=0.222 Sum_probs=56.1
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP-IDGV 149 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~-idgv 149 (1005)
++||||+|.||..++++|.++|..+.+++++.+... .. .+..+.+|++|++++.++++.. +.+.. +|.|
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v 71 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GP--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV 71 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CC--CCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence 799999999999999999999987655554433211 11 3455678999999999888654 33445 9999
Q ss_pred EEcCcc
Q psy612 150 LHIAGI 155 (1005)
Q Consensus 150 Ih~AG~ 155 (1005)
+|+++.
T Consensus 72 ~~~~~~ 77 (285)
T TIGR03649 72 YLVAPP 77 (285)
T ss_pred EEeCCC
Confidence 998864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=2.5e-05 Score=105.15 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
...++..+.++|+++|+++ .++.+++|+++|+|||++++|..+|++.||++++..++|++|||.+|+++|.+.
T Consensus 976 ~~~~e~~l~~~~~~~l~~~--~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 976 KTGTETIIAAAFSSLLGCD--VVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence 3456788999999999986 788999999999999999999999999999999999999999999999999654
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00038 Score=81.43 Aligned_cols=173 Identities=16% Similarity=0.136 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHH---HHhCCCC-Cccccccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLA---YFMDLKG-PVMAINTA 626 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris---~~~~l~G-ps~~v~ta 626 (1005)
.-+.++++..||+++|++++++. -|++|++.+.+.. ...+..|. ..+|.+. +++=+..|
T Consensus 54 ~tmA~~AA~~aL~~agid~~~Id----llivaTeT~~d~~-------------ps~A~~v~~ll~~LG~~~~~afDi~~A 116 (459)
T PLN02577 54 ISMSLTVVKSLLEKYNIDPKQIG----RLEVGSETVIDKS-------------KSIKTFLMQLFEESGNTDIEGVDSTNA 116 (459)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------CchHHHHHHHHHHhCCCCcEEeehhhh
Confidence 47889999999999999888776 5777876654321 11344443 3345443 66778899
Q ss_pred chhHHHHHHHHHHHHhcCCc--CEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccch
Q psy612 627 CSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~--d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~ 704 (1005)
|++++.||..|...|++|.. +-|||.|++.... ..+ +. + ..-|.|+++++|.+-.
T Consensus 117 C~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~--------~~~---~~---e--------~t~GdGA~A~lv~~~~- 173 (459)
T PLN02577 117 CYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY--------AEG---PA---R--------PTGGAGAVAMLVGPNA- 173 (459)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc--------cCC---CC---C--------CCCCcceEEEEEccCC-
Confidence 99999999999999999985 9999999997211 001 11 1 1129999999997421
Q ss_pred hhcCCCceEEEEEEeeeccCCCCCCCCCCC-----------------HHHHHHHHHHHHHHc------CCCCCCccEEEe
Q psy612 705 ALSDGDPIHAIIRGSGINYDGKTNGITAPN-----------------GISQTELIKSVYKKS------NLNPEDINYIIT 761 (1005)
Q Consensus 705 A~~~g~~I~avI~g~~~~~dG~~~~~~~p~-----------------~~~q~~~i~~al~~a------gi~~~~I~yve~ 761 (1005)
.+ .+-....|+... ...-+..|+ ......++++.+++. |+.++|++|+-.
T Consensus 174 ---~~-~l~~~~~g~~~~---~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~vf 246 (459)
T PLN02577 174 ---PI-VFESKYRGSHMA---HVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADYFVF 246 (459)
T ss_pred ---Cc-eeecccccccCc---ccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEEe
Confidence 00 011111222221 001111121 122233444444444 889999999999
Q ss_pred cCCCCCCCC
Q psy612 762 HGTGTKLGD 770 (1005)
Q Consensus 762 hgtgt~~gD 770 (1005)
|=.-|+++-
T Consensus 247 HqP~~km~~ 255 (459)
T PLN02577 247 HAPYNKLVQ 255 (459)
T ss_pred cCCccchhH
Confidence 998887553
|
|
| >PRK06508 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.6e-05 Score=68.94 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccc-----------cCCCHHHHHHH
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFF-----------SYSTLERLITY 404 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf-----------~~~Ti~~La~~ 404 (1005)
+.+.+++++++.+++++++|.++.+| .+||+|||..++|.-.|+++||++++..++- .+.|+++|+.+
T Consensus 4 i~ekv~~Ilae~~~vd~~~It~ds~~~edL~~DSLd~veli~~lE~eFgI~i~~ee~~~~~n~~~~~~~~~~~l~~~~~~ 83 (93)
T PRK06508 4 TFDKVADIIAETSDIPRDTITPESHTIDDLGIDSLDFLDIVFAIDKAFGIKLPLEQWTQEVNEGKVPTEEYFVLKNLCAK 83 (93)
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCCcchhccCCCHHHHHHHHHHHHHHHCCccCHHHHHHhhcccccccchHHHHHHHHHH
Confidence 45678999999999999999999976 9999999999999999999999999887764 55577888877
Q ss_pred HHHhh
Q psy612 405 FIKNH 409 (1005)
Q Consensus 405 l~~~~ 409 (1005)
+.+..
T Consensus 84 i~~~~ 88 (93)
T PRK06508 84 IDELV 88 (93)
T ss_pred HHHHH
Confidence 76543
|
|
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=4.7e-05 Score=79.74 Aligned_cols=149 Identities=22% Similarity=0.321 Sum_probs=96.0
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEe-eeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGS-GINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~-~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.-+|+.+.++...+.|++.|-+.-|.+|.+ -+++|-...-+..| .-+|-+.|++||++-.|||.+|.|-...
T Consensus 302 ltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kagltlkdid~feiheafa-- 374 (465)
T KOG1392|consen 302 LTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLTLKDIDVFEIHEAFA-- 374 (465)
T ss_pred hcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCcccccchhhhHHHHh--
Confidence 467888888888999999998888888876 46777766555555 3357789999999999999999995432
Q ss_pred CCH-HHHHHHHH-Hhcc----CCCCCCceeE-------eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccc
Q psy612 769 GDP-VEINALHD-VFKN----KTYNQKFCAI-------TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 835 (1005)
Q Consensus 769 gD~-~E~~al~~-~~~~----~~~~~~~~~i-------gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~ 835 (1005)
|.- ..++|+.. .|+. ...+-...++ ||+ .|||+.+|.|+-=...+.--|+.
T Consensus 375 gqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggsl--sighpfgatgvrl~mh~anrl~~-------------- 438 (465)
T KOG1392|consen 375 GQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSL--SIGHPFGATGVRLAMHSANRLKE-------------- 438 (465)
T ss_pred HHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcce--ecCCcccccchhhHHHHHhHHHh--------------
Confidence 111 12333322 2321 1111111122 333 38999999995322222111111
Q ss_pred ccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 836 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 836 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
++.+++.|-+-..||....+++|.||
T Consensus 439 ----------------------e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 439 ----------------------EKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred ----------------------hcCceeEeehhhcCCcceEEEeeccC
Confidence 12367778888899999999999986
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0002 Score=87.71 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=72.0
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|-||..+++.|.++|..++++. |.... . ....+.++.+|+++.. +.+++ ..+|.|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ld-r~~~~------~--~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V 64 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIA-QHPHD------A--LDPRVDYVCASLRNPV-LQELA-------GEADAV 64 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEe-CChhh------c--ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence 589999999999999999999997665554 43211 1 1235778999999973 33222 258999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
||+|+... .. ...+|+.|+.++.+++.. .+. .||++||..
T Consensus 65 IHLAa~~~-~~------------~~~vNv~Gt~nLleAA~~-------~Gv-RiV~~SS~~ 104 (699)
T PRK12320 65 IHLAPVDT-SA------------PGGVGITGLAHVANAAAR-------AGA-RLLFVSQAA 104 (699)
T ss_pred EEcCccCc-cc------------hhhHHHHHHHHHHHHHHH-------cCC-eEEEEECCC
Confidence 99998632 11 114789999999988532 233 588888763
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00039 Score=74.06 Aligned_cols=199 Identities=17% Similarity=0.101 Sum_probs=117.5
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
++||||+|=||++++..|.+.|..+.+++++....... .+..+. ..+. ++.... .++|.||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~------~~~~v~-------~~~~----~~~~~~--~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN------LHPNVT-------LWEG----LADALT--LGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh------cCcccc-------ccch----hhhccc--CCCCEEE
Confidence 58999999999999999999988777777766533211 111111 1111 111111 1799999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh----hHHHH
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY----AMGNR 226 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y----aaana 226 (1005)
|-||.....+. -+.+.=+..++.-+..+-.|.+++.. . +.+...+ .-+|..|++|..+...| ...+.
T Consensus 62 NLAG~~I~~rr---Wt~~~K~~i~~SRi~~T~~L~e~I~~----~-~~~P~~~-isaSAvGyYG~~~~~~~tE~~~~g~~ 132 (297)
T COG1090 62 NLAGEPIAERR---WTEKQKEEIRQSRINTTEKLVELIAA----S-ETKPKVL-ISASAVGYYGHSGDRVVTEESPPGDD 132 (297)
T ss_pred ECCCCcccccc---CCHHHHHHHHHHHhHHHHHHHHHHHh----c-cCCCcEE-EecceEEEecCCCceeeecCCCCCCC
Confidence 99997542221 35566666777777777777666432 2 2333344 34677788887776554 34578
Q ss_pred HHHHHHHHHHhccccc-cCCceEEEEeCCcccC--cccccccchhhhHHH------HhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYK-KYTNKLITINWPLWNN--SKFKIGNNEQTDFYF------KSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~-~~~~~~~si~wg~w~~--~Gm~~~~~~~~~~~~------~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+..+|+.+..+.... ..++|++-+--|..-. +|+...........+ -+.-+..+..++.++.+..++...
T Consensus 133 Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 133 FLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred hHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 8888888776654432 3356777766665532 444332211110000 011233467788888888887653
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=9.9e-05 Score=82.05 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=61.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+++++|+|+ ||+|++++..|++.|++.|++..|+. ..+++.+++...+..+.+..+|+++.+++.+.++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~----- 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA----- 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-----
Confidence 5789999999 79999999999999999888888774 3455556665555556667789988776655433
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
..|+||||.-+.
T Consensus 199 --~~DilINaTp~G 210 (289)
T PRK12548 199 --SSDILVNATLVG 210 (289)
T ss_pred --cCCEEEEeCCCC
Confidence 359999988543
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=6.4e-05 Score=111.45 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
...++..|.++|+++|+++ +|+.+++||++|+|||++++|..++++.||++|++.++|++|||.+||++|..
T Consensus 4239 ~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~~ 4310 (4334)
T PRK05691 4239 RNELEQTLATIWADVLKVE--RVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIEG 4310 (4334)
T ss_pred CCHHHHHHHHHHHHHhCCC--cCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHhh
Confidence 4567889999999999984 69999999999999999999999999999999999999999999999999964
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00022 Score=82.43 Aligned_cols=132 Identities=20% Similarity=0.224 Sum_probs=92.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcC--CcEEEEecCCCchHH------------HHHHHHhC-C---CcEEEEEec
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKY--STNLILSGRSKLNSI------------IYKKLKKF-N---NKAIYIQVD 125 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~G--a~~vil~~r~~~~~~------------~~~~l~~~-g---~~v~~~~~D 125 (1005)
.+-.+|+++||||+|.+|..+.+.|++.- ..++.++-|....++ +.+.+++. + .++..+..|
T Consensus 8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 45689999999999999999999999763 557777777543221 22223222 2 577888999
Q ss_pred CCCHHHH-HHH-HHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q psy612 126 VSDKLKM-ISE-INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFV 203 (1005)
Q Consensus 126 vtd~~~v-~~~-~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~i 203 (1005)
+++++-- ..- ++.+ ...+++|||+|+...++ |-++..+..|+.|+.++.+.+... ..+..+
T Consensus 88 i~~~~LGis~~D~~~l---~~eV~ivih~AAtvrFd--------e~l~~al~iNt~Gt~~~l~lak~~------~~l~~~ 150 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTL---ADEVNIVIHSAATVRFD--------EPLDVALGINTRGTRNVLQLAKEM------VKLKAL 150 (467)
T ss_pred ccCcccCCChHHHHHH---HhcCCEEEEeeeeeccc--------hhhhhhhhhhhHhHHHHHHHHHHh------hhhheE
Confidence 9886521 111 1112 23699999999877622 446778999999999999987553 246789
Q ss_pred EEecCcccc
Q psy612 204 CYFSSSSAI 212 (1005)
Q Consensus 204 V~~SSia~~ 212 (1005)
|.+|...+.
T Consensus 151 vhVSTAy~n 159 (467)
T KOG1221|consen 151 VHVSTAYSN 159 (467)
T ss_pred EEeehhhee
Confidence 999986554
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=7.8e-05 Score=109.59 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
...++..+.++|+++|+++ .|+.+++||++|+|||++++|..+|++.||++|+..++|++|||++||+++..
T Consensus 3603 ~~~~e~~l~~i~~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3603 RSEVEQQLAAIWADVLGVE--QVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHhh
Confidence 4457889999999999985 69999999999999999999999999999999999999999999999998853
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=97.54 E-value=9.5e-05 Score=70.61 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=75.1
Q ss_pred ceEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCC
Q psy612 711 PIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQK 789 (1005)
Q Consensus 711 ~I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~ 789 (1005)
++.|.|.+++... |... .. .+-..+++++|+++|++++|||++|.|-..+. .++..++. ++-...+-+
T Consensus 2 ~pla~i~~~~~~~~~P~~-~~-----~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l~~~~~-lg~~~~~vN 70 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPED-MG-----LGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVLAFLEA-LGLDPEKVN 70 (123)
T ss_dssp -ESEEEEEEEEEE--GGG-GG-----GTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHHHHHHH-HTTGGGGBS
T ss_pred CeEEEEEEEEEEecCHHH-hC-----chHHHHHHHHHHHhCCCccccchhhccchhhh----HHHHhhcc-ccccccccC
Confidence 3678888887653 2211 11 22357899999999999999999999987764 34433333 332211111
Q ss_pred ceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccC
Q psy612 790 FCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 869 (1005)
Q Consensus 790 ~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG 869 (1005)
+-|...+ +||+.+|+|+..++.++.+|+.+ ..+++.++.-+
T Consensus 71 --~~GG~la-~GHP~gasG~r~~~~l~~~L~~~------------------------------------~~~~gla~~~~ 111 (123)
T PF02803_consen 71 --PNGGALA-LGHPLGASGARLVVELAHQLRRR------------------------------------GGRYGLAAICA 111 (123)
T ss_dssp --TT--HHH-H-BHTTTHHHHHHHHHHHHHHHH------------------------------------TTSEEEEEEEE
T ss_pred --ccccccc-ccccccccccchhhhhHHHHHHh------------------------------------chhhhhHHhcc
Confidence 2355555 59999999999999999999873 12445566667
Q ss_pred CCCceEEEEEec
Q psy612 870 MSGTNAHIVLQE 881 (1005)
Q Consensus 870 ~gG~nah~il~~ 881 (1005)
-||....+|||+
T Consensus 112 ggG~g~a~ller 123 (123)
T PF02803_consen 112 GGGQGSAVLLER 123 (123)
T ss_dssp TTTEEEEEEEEE
T ss_pred cceeeEEEEEEC
Confidence 788888888874
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0002 Score=76.00 Aligned_cols=156 Identities=19% Similarity=0.213 Sum_probs=107.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchH-HHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-IIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~-~~~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.|++||||=+|--|.-+|+.|+++|..+--+.+|+.... ... .|.. .+.+++.+.+|++|...+.++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 589999999999999999999999998888888853221 111 2222 2456889999999999999999887
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
..|-|.|.|+-.. ...+.++=..+.+++..|+++|.++..- . . +...-.+..|.+-.+|.
T Consensus 78 --~PdEIYNLaAQS~-----V~vSFe~P~~T~~~~~iGtlrlLEaiR~----~-~-~~~~rfYQAStSE~fG~v~~~pq~ 144 (345)
T COG1089 78 --QPDEIYNLAAQSH-----VGVSFEQPEYTADVDAIGTLRLLEAIRI----L-G-EKKTRFYQASTSELYGLVQEIPQK 144 (345)
T ss_pred --Cchhheecccccc-----ccccccCcceeeeechhHHHHHHHHHHH----h-C-CcccEEEecccHHhhcCcccCccc
Confidence 6788889886443 2223333345677889999999988432 1 1 21233344555545542
Q ss_pred -----CCChhhhHHHHHHHHHHH-HHHhccc
Q psy612 216 -----FGSCDYAMGNRFQTVYAK-YLNNKNI 240 (1005)
Q Consensus 216 -----~g~~~Yaaana~l~~la~-~~~~~g~ 240 (1005)
...+.|++||.+-..++. ||.+.|+
T Consensus 145 E~TPFyPrSPYAvAKlYa~W~tvNYResYgl 175 (345)
T COG1089 145 ETTPFYPRSPYAVAKLYAYWITVNYRESYGL 175 (345)
T ss_pred cCCCCCCCCHHHHHHHHHHheeeehHhhcCc
Confidence 235789999988777655 4444444
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.003 Score=67.83 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=86.3
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
++|+||+|.+|+.+++.|.+.+..+.++++.. .....++++..|.+ ++.+|..|.+++.++++ .+|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~--vv~~d~~~~~~l~~al~-------g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAE--VVEADYDDPESLVAALK-------GVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTE--EEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccce--EeecccCCHHHHHHHHc-------CCceEE
Confidence 68999999999999999999887766666655 34455667777764 56999999988876663 689999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-C-C--hhhhHHHH
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-G-S--CDYAMGNR 226 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g-~--~~Yaaana 226 (1005)
.+-+... . .-+....++.+++.. .+..+|| +||........ + . ..+-..|.
T Consensus 70 ~~~~~~~-~----------------~~~~~~~~li~Aa~~-------agVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~ 124 (233)
T PF05368_consen 70 SVTPPSH-P----------------SELEQQKNLIDAAKA-------AGVKHFV-PSSFGADYDESSGSEPEIPHFDQKA 124 (233)
T ss_dssp EESSCSC-C----------------CHHHHHHHHHHHHHH-------HT-SEEE-ESEESSGTTTTTTSTTHHHHHHHHH
T ss_pred eecCcch-h----------------hhhhhhhhHHHhhhc-------cccceEE-EEEecccccccccccccchhhhhhh
Confidence 8876532 1 112233455566432 2477887 56654433211 1 1 11123444
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
.++ ++++..++ +++.|..|.|
T Consensus 125 ~ie---~~l~~~~i------~~t~i~~g~f 145 (233)
T PF05368_consen 125 EIE---EYLRESGI------PYTIIRPGFF 145 (233)
T ss_dssp HHH---HHHHHCTS------EBEEEEE-EE
T ss_pred hhh---hhhhhccc------cceeccccch
Confidence 443 44455554 7777776665
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00081 Score=70.80 Aligned_cols=113 Identities=13% Similarity=0.168 Sum_probs=94.3
Q ss_pred CChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-----------ccccccccccccchhHHH
Q psy612 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-----------QDRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 539 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~a 607 (1005)
|++.+.++|.+..|++++++++++++.+ +.. .+++++..|+.. ...++|..|..+..|.++
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~~----~~d----~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~a 94 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAEDE----QPD----AIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAA 94 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhccC----CCC----cEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHH
Confidence 8999999999999999999999996531 111 566777766532 123567777777889999
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCH
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISP 660 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~ 660 (1005)
+.+|...+.+||+.++..+-.|--.||-.|+..|..| ++-+|++.+|..++.
T Consensus 95 G~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~ 146 (218)
T PF13723_consen 95 GYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPE 146 (218)
T ss_pred HHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCCh
Confidence 9999999999999999999999999999999999999 999999999986544
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00051 Score=80.91 Aligned_cols=117 Identities=17% Similarity=0.195 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccc-cc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN-TA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~-ta 626 (1005)
...++.+++.+||+++|+++++++ ++|-++...+ ..-.++.+|...+|++. +++-+. .+
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DID-----iLIv~~S~~~-------------~~PSlaa~I~n~lGlr~~i~afdLsgmG 237 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIG-----ILIVNCSLFN-------------PTPSLSAMVINHYKLRGNILSYNLGGMG 237 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC-------------CCchHHHHHHHHhCCCCCceEEEcccch
Confidence 457788899999999999887764 3332222211 11236778888899985 788898 69
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCC----ceecCccEEEEEccc
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANG----LVPSEAVVAVVLKRL 702 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G----~~~gEGa~~vvLk~l 702 (1005)
||+++.||+.|.+.|+.+....|||.+++.+. ...+ +..+++- ..+|.|+|++||..-
T Consensus 238 CSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n~y-----------------~g~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 238 CSAGLISIDLAKHLLQVHPNSYALVISMENIT-LNWY-----------------FGNDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred hhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-ccCC-----------------CCCCHHHHhccccccccceEEEEecc
Confidence 99999999999999999999999999999743 1100 0011111 247999999999863
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00051 Score=73.60 Aligned_cols=98 Identities=9% Similarity=0.152 Sum_probs=64.1
Q ss_pred CEEEEECCh-hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGT-GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~-gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+=.||+.+ |.||.++|+.|+++|+.++++.++..... .....+.++.+ .+.+++.+ .+.+.++.+|
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v--~s~~~m~~---~l~~~~~~~D 83 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEI--ENVDDLLE---TLEPLVKDHD 83 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEE--ecHHHHHH---HHHHHhcCCC
Confidence 366788755 45999999999999997776665432100 01123455543 33333333 3333456799
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhh
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKIS 179 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~ 179 (1005)
+||||||+.. ..+....+.++|..+++++-.
T Consensus 84 ivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~ 114 (229)
T PRK06732 84 VLIHSMAVSD-YTPVYMTDLEEVSASDNLNEF 114 (229)
T ss_pred EEEeCCccCC-ceehhhhhhhhhhhhhhhhhh
Confidence 9999999976 566777788888888777544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00048 Score=79.26 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCEEEEECC---------------hhH-HHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGG---------------TGR-LGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg---------------~gG-IG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
+++.+||||| ++| +|.++|+.|..+|+.++++.++.... .... ...+|+++.+
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~~~ 252 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVSTAE 252 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEeccHH
Confidence 6899999999 556 99999999999999887777665321 1111 2468999999
Q ss_pred HH-HHHHHHHHhhcCCccEEEEcCcccCccchh
Q psy612 131 KM-ISEINSIINNIGPIDGVLHIAGISGLTSNI 162 (1005)
Q Consensus 131 ~v-~~~~~~i~~~~g~idgvIh~AG~~~~~~~~ 162 (1005)
++ +.++++ .++.+|++|||||+.. ..+.
T Consensus 253 ~~~~~~~~~---~~~~~D~~i~~Aavsd-~~~~ 281 (390)
T TIGR00521 253 EMLEAALNE---LAKDFDIFISAAAVAD-FKPK 281 (390)
T ss_pred HHHHHHHHh---hcccCCEEEEcccccc-cccc
Confidence 98 555544 3578999999999976 4443
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.005 Score=60.03 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=92.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC--C
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG--P 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g--~ 145 (1005)
.+.++|-||-|.+|.++.++|-+++..+.-+.-... ++... -.++..|-+=.++-+.+++++.+..+ .
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eN---------e~Ad~-sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSEN---------EQADS-SILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccc---------ccccc-eEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 467899999999999999999988775543321111 01111 22344444444555666666655443 7
Q ss_pred ccEEEEcCcccCccchhccCC-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEAN-YKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t-~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|+||+-||-.. .+....++ .+.-+-++.-.+.....-.+.+..++ .+.+.+-+..--+++-|.||...|+++
T Consensus 73 vDav~CVAGGWA-GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HL-----K~GGLL~LtGAkaAl~gTPgMIGYGMA 146 (236)
T KOG4022|consen 73 VDAVFCVAGGWA-GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHL-----KPGGLLQLTGAKAALGGTPGMIGYGMA 146 (236)
T ss_pred cceEEEeecccc-CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhcc-----CCCceeeecccccccCCCCcccchhHH
Confidence 999999998654 22211111 01111122222222222223332221 245556666666777889999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNK 238 (1005)
Q Consensus 225 na~l~~la~~~~~~ 238 (1005)
|+++..|++.+..+
T Consensus 147 KaAVHqLt~SLaak 160 (236)
T KOG4022|consen 147 KAAVHQLTSSLAAK 160 (236)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999998765
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00017 Score=106.25 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..++..|.++|+++|+++ .|+.+++||++|+|||.+++|..++++.||++|+..++|++|||.+||+++...
T Consensus 1029 ~~~e~~l~~i~~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~~ 1100 (3956)
T PRK12467 1029 TELEKRLAAIWADVLKVE--RVGLTDNFFELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAAQ 1100 (3956)
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCCchhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhhh
Confidence 457788999999999984 699999999999999999999999999999999999999999999999999764
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00018 Score=107.87 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
...++..+.++|+++|+++ .|+.+++||++|+|||.+++|.+.|++.||++|+..++|++|||++||++|..
T Consensus 5070 ~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 5141 (5163)
T PRK12316 5070 RSELEQQVAAIWAEVLQLE--RVGLDDNFFELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELAAA 5141 (5163)
T ss_pred CcHHHHHHHHHHHHHhCCC--CCCCCCChhhccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHHHh
Confidence 3457888999999999985 69999999999999999999999999999999999999999999999999854
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0002 Score=106.30 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..++..|.++|+++|+++ +|+.+++||++|+|||.+++|..+++++||++|+..++|++|||.+||+++...
T Consensus 1637 ~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~i~~~ 1708 (4334)
T PRK05691 1637 TELQQQIAAIWREVLGLP--RVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQVARI 1708 (4334)
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHHhhhh
Confidence 457788999999999985 689999999999999999999999999999999999999999999999998653
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0018 Score=75.03 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=83.9
Q ss_pred CCEEEEE----CChhHHHHHHHHHHHHcCCcEEEEecCCCchHHH-------HHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy612 68 GGTYLIT----GGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII-------YKKLKKFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 68 ~~~~lIT----Gg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~-------~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
.+.+||| ||+|-||..+++.|+++|..++++.++....... ..++... .+.++.+|++| +.+++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA--GVKTVWGDPAD---VKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc--CceEEEecHHH---HHhhh
Confidence 4679999 9999999999999999998766666554322111 1223322 36778889876 33333
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
. ...+|.|||+++.. +.++..+.+++ +.....+||++||... ++..
T Consensus 127 ----~-~~~~d~Vi~~~~~~---------------------~~~~~~ll~aa-------~~~gvkr~V~~SS~~v-yg~~ 172 (378)
T PLN00016 127 ----A-GAGFDVVYDNNGKD---------------------LDEVEPVADWA-------KSPGLKQFLFCSSAGV-YKKS 172 (378)
T ss_pred ----c-cCCccEEEeCCCCC---------------------HHHHHHHHHHH-------HHcCCCEEEEEccHhh-cCCC
Confidence 1 13689999987531 11334455552 3335678999999753 3321
Q ss_pred CC-h-------hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 217 GS-C-------DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 g~-~-------~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
.. . ....+|...+.+.+ ..++ +++.+..+.+-
T Consensus 173 ~~~p~~E~~~~~p~~sK~~~E~~l~---~~~l------~~~ilRp~~vy 212 (378)
T PLN00016 173 DEPPHVEGDAVKPKAGHLEVEAYLQ---KLGV------NWTSFRPQYIY 212 (378)
T ss_pred CCCCCCCCCcCCCcchHHHHHHHHH---HcCC------CeEEEeceeEE
Confidence 11 0 01125666665442 3333 77777765553
|
|
| >TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2 | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00045 Score=59.22 Aligned_cols=68 Identities=13% Similarity=0.252 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCCcccccCCchhhcCC-chHHHHHHHHHHHhhcCcccCccccc--cCCCHHHHHHHHH
Q psy612 339 NDIKNHICNILNTKKSEIYKNKNLADYGF-DSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFI 406 (1005)
Q Consensus 339 ~~l~~~ia~~L~~~~~~i~~~~~l~elG~-DSL~a~el~~~l~~~~g~~l~~~~lf--~~~Ti~~La~~l~ 406 (1005)
+.+.++++++.+.+......+++|++-|+ ||+-+++|...|+++||+++|++++- ...|++.+.+.+.
T Consensus 2 e~i~eIL~~i~~~~~~~~~~d~~L~~~GllDS~~~v~Li~~lE~ef~I~i~~~el~~enf~S~~~i~~~v~ 72 (73)
T TIGR01688 2 NGVLDILAEVTGSDDVKENPDLELFEEGLLDSFGTVQLLLEIQNQFDIDVPISEFDRDEWDTPNKIVAKLE 72 (73)
T ss_pred hHHHHHHHHHhcCcccccCccHHHHHccchhHHHHHHHHHHHHHHhCCccCHHHcCHHHhcCHHHHHHHHh
Confidence 35778888887776555688999999998 99999999999999999999998765 4568888877653
|
This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein. |
| >KOG1748|consensus | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00037 Score=65.64 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+.+...+...+.++++.+.++..| .+||+|||-.+|+.-.|+++||.+||-.+-=+--|+++.++||.++
T Consensus 52 ~~v~~RVl~VVk~~dki~~~k~~~~s~f~~DLGlDSLD~VEiVMAlEEEFgiEIpd~dAdki~t~~da~~yI~~~ 126 (131)
T KOG1748|consen 52 KEVVDRVLDVVKKFDKIDPSKLTTDSDFFKDLGLDSLDTVEIVMALEEEFGIEIPDEDADKIKTVRDAADYIADK 126 (131)
T ss_pred HHHHHHHHHHHHHhhcCCccccchhhHHHHhcCCcccccchhhhhhHHHhCCccCcchhhhhCCHHHHHHHHHhc
Confidence 3466778888999999988888888665 6999999999999999999999999988888889999999999874
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00034 Score=105.14 Aligned_cols=73 Identities=12% Similarity=0.174 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
...++..|.++|+++|+++ .|+.+++|+++|+|||++++|.+++++.||++|+..++|++|||.+||..+...
T Consensus 2514 ~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~l~~~ 2586 (5163)
T PRK12316 2514 QEGLEQRLAAIWQAVLKVE--QVGLDDHFFELGGHSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAASLESG 2586 (5163)
T ss_pred CCHHHHHHHHHHHHHhCCC--ccCCCCchhhhcchHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhhhhhh
Confidence 3456788999999999985 699999999999999999999999999999999999999999999999988653
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0064 Score=63.47 Aligned_cols=80 Identities=23% Similarity=0.223 Sum_probs=55.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++++|+||+|++|+.+++.|+++|+ .+++.+|+. ..+++.+.+.+.. ......+|..+.+++.++++ .
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-------~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK-------G 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-------c
Confidence 568999999999999999999999986 555556653 3344444454221 23345678888887766553 4
Q ss_pred ccEEEEcCcc
Q psy612 146 IDGVLHIAGI 155 (1005)
Q Consensus 146 idgvIh~AG~ 155 (1005)
.|.||++...
T Consensus 98 ~diVi~at~~ 107 (194)
T cd01078 98 ADVVFAAGAA 107 (194)
T ss_pred CCEEEECCCC
Confidence 6888886643
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0033 Score=55.54 Aligned_cols=62 Identities=24% Similarity=0.332 Sum_probs=45.6
Q ss_pred ccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 623 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 623 v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
|..+|++.+.||++|...|++|.++.+|+.+.+....... + ......++.|+|++++||++-
T Consensus 3 i~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~-----------~-------~~~~~~~~~gDgAaA~vl~~~ 64 (80)
T PF08545_consen 3 INQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD-----------R-------TDRQTAFIFGDGAAAVVLSRD 64 (80)
T ss_dssp EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH-----------T-------THHHHHTTB-EEEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc-----------c-------cccCcceeecchheEEEEEec
Confidence 6789999999999999999999999999999997432100 0 011234478999999999975
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=63.27 Aligned_cols=162 Identities=18% Similarity=0.280 Sum_probs=104.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCch--HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN--SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~--~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+.++||||.|=||...+..++...-. +++.+..-.-. ....++.+ ...+..++..|+.++..+..++.+ .+
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~-----~~ 80 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET-----EE 80 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc-----Cc
Confidence 88999999999999999999987532 23322211100 11122222 235678999999998887766643 38
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
||.|||.|.....+..+.+ . -.....|+.++..|.+.+... .....||.+|+-.- .|..
T Consensus 81 id~vihfaa~t~vd~s~~~----~-~~~~~nnil~t~~Lle~~~~s------g~i~~fvhvSTdeV-YGds~~~~~~~E~ 148 (331)
T KOG0747|consen 81 IDTVIHFAAQTHVDRSFGD----S-FEFTKNNILSTHVLLEAVRVS------GNIRRFVHVSTDEV-YGDSDEDAVVGEA 148 (331)
T ss_pred hhhhhhhHhhhhhhhhcCc----h-HHHhcCCchhhhhHHHHHHhc------cCeeEEEEecccce-ecCcccccccccc
Confidence 9999999976542222211 1 234567899999998886432 35678999998532 2211
Q ss_pred ----CChhhhHHHHHHHHHHHHHH-hccccccCCceEEEEeCC
Q psy612 217 ----GSCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWP 254 (1005)
Q Consensus 217 ----g~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg 254 (1005)
.-..||++|++.+.+.+... +.++ +++.+-.+
T Consensus 149 s~~nPtnpyAasKaAaE~~v~Sy~~sy~l------pvv~~R~n 185 (331)
T KOG0747|consen 149 SLLNPTNPYAASKAAAEMLVRSYGRSYGL------PVVTTRMN 185 (331)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHhhccCC------cEEEEecc
Confidence 12459999999999988654 4443 66666543
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.04 Score=60.27 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=82.8
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|.+|..+++.|.++|..+.++.++.+..... . ..+.+...|+.++..+...+ ..++++
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~----~---~~v~~~~~d~~~~~~l~~a~-------~G~~~~ 67 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL----A---GGVEVVLGDLRDPKSLVAGA-------KGVDGV 67 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh----c---CCcEEEEeccCCHhHHHHHh-------ccccEE
Confidence 589999999999999999999987766666665433322 2 45788899999988776555 357788
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
++..+... ... . .............+.. . .....++.+|++.+.. ...+.|..+|...+
T Consensus 68 ~~i~~~~~-~~~-~---------~~~~~~~~~~~~a~~a-------~-~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e 126 (275)
T COG0702 68 LLISGLLD-GSD-A---------FRAVQVTAVVRAAEAA-------G-AGVKHGVSLSVLGADA--ASPSALARAKAAVE 126 (275)
T ss_pred EEEecccc-ccc-c---------hhHHHHHHHHHHHHHh-------c-CCceEEEEeccCCCCC--CCccHHHHHHHHHH
Confidence 87776532 111 1 1122233333333331 1 2345577776654432 35678899888887
Q ss_pred HHHH
Q psy612 230 VYAK 233 (1005)
Q Consensus 230 ~la~ 233 (1005)
....
T Consensus 127 ~~l~ 130 (275)
T COG0702 127 AALR 130 (275)
T ss_pred HHHH
Confidence 6654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.017 Score=65.99 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=60.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+.+||.|+ |++|+.+|+.|+++|...|.+.+|+... .+++.. .+.++...++|+.|.+++.+++++. |
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~---~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~-------d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEK---CARIAELIGGKVEALQVDAADVDALVALIKDF-------D 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHH---HHHHHhhccccceeEEecccChHHHHHHHhcC-------C
Confidence 45788888 9999999999999997788888888422 223322 2458899999999999888887542 9
Q ss_pred EEEEcCcccC
Q psy612 148 GVLHIAGISG 157 (1005)
Q Consensus 148 gvIh~AG~~~ 157 (1005)
.|||++....
T Consensus 71 ~VIn~~p~~~ 80 (389)
T COG1748 71 LVINAAPPFV 80 (389)
T ss_pred EEEEeCCchh
Confidence 9999986543
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.025 Score=65.89 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccc-cch
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINT-ACS 628 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~t-aCs 628 (1005)
--+..++.+||+++|+++++++ +++-+..+.+ ..-.++.++...+|++. ..+-|.. +|+
T Consensus 136 m~i~~A~~~aL~~aGi~p~dID-----~LIvs~T~~~-------------~~Pslaa~l~~~LGLr~~v~~~dL~gmGCs 197 (466)
T PLN00415 136 LVIFGALNSLFKKTGIEPREVG-----IFIVNCSLFN-------------PNPSLSSMIVNRYKLKTDVKTYNLSGMGCS 197 (466)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-----EEEEECcCCC-------------CCchHHHHHHHHhCCCCCceEEEeccccch
Confidence 3444477788899999887764 3332222211 01235677888889973 4566776 999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
+++.+|..|.+.++++....|||.+++.+.... + ..+.+. .-=....+|.|++++||..-
T Consensus 198 ggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~-~---------~~~dr~----~lv~n~LFgDGAAAvlLs~~ 257 (466)
T PLN00415 198 AGAISVDLATNLLKANPNTYAVIVSTENMTLSM-Y---------RGNDRS----MLVPNCLFRVGGAAVMLSNR 257 (466)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-c---------CCCcHh----HhccceeecccceEEEEecC
Confidence 999999999999999999999999999732111 0 000000 00012457999999999853
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.023 Score=60.86 Aligned_cols=145 Identities=18% Similarity=0.184 Sum_probs=92.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++.+++||||.|=||..+++.|..+|..+|++.--.....+.....-. ...+..+.-|+..+ ++. .+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-------ev 92 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-------EV 92 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------Hh
Confidence 568999999999999999999999996555554333222211111111 23456667777765 222 37
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 216 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~---------- 216 (1005)
|-|+|.|....+ ..+..-. .+++..|+.|++++..++... ..+|+++|+ +-++|.|
T Consensus 93 D~IyhLAapasp-~~y~~np----vktIktN~igtln~lglakrv--------~aR~l~aST-seVYgdp~~hpq~e~yw 158 (350)
T KOG1429|consen 93 DQIYHLAAPASP-PHYKYNP----VKTIKTNVIGTLNMLGLAKRV--------GARFLLAST-SEVYGDPLVHPQVETYW 158 (350)
T ss_pred hhhhhhccCCCC-cccccCc----cceeeecchhhHHHHHHHHHh--------CceEEEeec-ccccCCcccCCCccccc
Confidence 778898876652 1111111 246788999999988875432 245666665 3344432
Q ss_pred -------CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 -------GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 -------g~~~Yaaana~l~~la~~~~~~ 238 (1005)
-++.|.-+|...+.|+....++
T Consensus 159 g~vnpigpr~cydegKr~aE~L~~~y~k~ 187 (350)
T KOG1429|consen 159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQ 187 (350)
T ss_pred cccCcCCchhhhhHHHHHHHHHHHHhhcc
Confidence 3567999999999998865443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.011 Score=68.88 Aligned_cols=76 Identities=24% Similarity=0.350 Sum_probs=54.0
Q ss_pred EEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++|.|+ |.+|..+++.|++++.. .+++.+|+... +++.+++ .+.++.++++|+.|.+++.++++ ..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence 689999 99999999999999865 78888887532 2222222 56789999999999998877764 3499
Q ss_pred EEEcCccc
Q psy612 149 VLHIAGIS 156 (1005)
Q Consensus 149 vIh~AG~~ 156 (1005)
||||+|..
T Consensus 71 Vin~~gp~ 78 (386)
T PF03435_consen 71 VINCAGPF 78 (386)
T ss_dssp EEE-SSGG
T ss_pred EEECCccc
Confidence 99999864
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.023 Score=63.87 Aligned_cols=120 Identities=15% Similarity=0.045 Sum_probs=76.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+.+.++|||++|.+|..++..|+.++ +..+++..+ +..+....+|....... ...+.+|+.+.. +...
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g~a~Dl~~~~~~~--~v~~~td~~~~~-------~~l~ 75 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPGVAADLSHIDTPA--KVTGYADGELWE-------KALR 75 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCcccccchhhcCcCc--eEEEecCCCchH-------HHhC
Confidence 345688999999999999999998766 456777776 32222222333322222 233555533321 2234
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS 209 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSi 209 (1005)
..|+||++||... . + . +.+...+..|+..+..+.+.+ .+...+.+|+++|-
T Consensus 76 gaDvVVitaG~~~-~-~--~---~tR~dll~~N~~i~~~i~~~i-------~~~~~~~iviv~SN 126 (321)
T PTZ00325 76 GADLVLICAGVPR-K-P--G---MTRDDLFNTNAPIVRDLVAAV-------ASSAPKAIVGIVSN 126 (321)
T ss_pred CCCEEEECCCCCC-C-C--C---CCHHHHHHHHHHHHHHHHHHH-------HHHCCCeEEEEecC
Confidence 7999999999854 1 1 1 235678999999888888773 33356678888773
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0076 Score=64.48 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=51.0
Q ss_pred CCCEEEEECCh----------------hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGGT----------------GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg~----------------gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
.++.+|||+|. |-+|..+|++|.++|+.++++.+....... .+. .+..+..+.. ..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s----~~ 73 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEG----II 73 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEec----HH
Confidence 57889999886 999999999999999988777654321110 000 1222333333 23
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccC
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISG 157 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~ 157 (1005)
++...+.++... ...|.|||+|++..
T Consensus 74 d~~~~l~~~~~~-~~~D~VIH~AAvsD 99 (229)
T PRK09620 74 DLQDKMKSIITH-EKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHHHhcc-cCCCEEEECccccc
Confidence 333344443332 25799999999865
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.036 Score=60.41 Aligned_cols=194 Identities=17% Similarity=0.169 Sum_probs=114.1
Q ss_pred cCcEEEEeeccccCCC---CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCC
Q psy612 462 EELIAIIGMSGRFPAA---RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFE 538 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~---~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~ 538 (1005)
.++|-.+-.+|--|.. -+.+.|++....-.. +++ +.-+|-.+-+... |+ .+--.+-+.++.
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~-~sl~F~~kIlerS-------------Gl-G~eTy~P~~~~~ 69 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDE-ESLDFQRKILERS-------------GL-GDETYLPPALHE 69 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CCh-hHHHHHHHHHHhc-------------CC-CccccCCccccc
Confidence 3578899999999875 467888887764322 111 0001111111100 10 000111222333
Q ss_pred CChh--hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC
Q psy612 539 ISPL--EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 539 is~~--ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
++|. -....+-...++-.++.++|+.+|+.|++++ .+++.++... ..-.++++|...|++
T Consensus 70 ~p~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dId----iLVvncs~f~--------------ptPSLsamIvnr~~m 131 (290)
T PF08392_consen 70 IPPDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDID----ILVVNCSLFN--------------PTPSLSAMIVNRYGM 131 (290)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECcCCC--------------cCCcHHHHHHHHhCC
Confidence 3332 1112244556778889999999999887764 3444443221 111356777777888
Q ss_pred CCCcccc---cccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 617 KGPVMAI---NTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 617 ~Gps~~v---~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
+.-..+. .-|||+++.+|.+|.+.|+...-..|||..++... +..|.+-.+.-+++ ...++.|
T Consensus 132 r~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s-~~~Y~G~~rsmlv~-------------NcLFr~G 197 (290)
T PF08392_consen 132 RSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENIS-ANWYRGNDRSMLVS-------------NCLFRMG 197 (290)
T ss_pred CcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecc-cccccCCcHHHhhc-------------cccccCC
Confidence 8754443 35899999999999999999999999999999744 33333333333332 2246778
Q ss_pred cEEEEEcccc
Q psy612 694 VVAVVLKRLS 703 (1005)
Q Consensus 694 a~~vvLk~l~ 703 (1005)
+++++|..-.
T Consensus 198 gAAvLLSn~~ 207 (290)
T PF08392_consen 198 GAAVLLSNKP 207 (290)
T ss_pred ceeEEeecCc
Confidence 8888887543
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.078 Score=54.89 Aligned_cols=84 Identities=20% Similarity=0.254 Sum_probs=61.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCC--cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga--~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+.++||||+|=.|.+|.+.+.++|. ...++.+.. .||+++..++++++++. ..
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk--------------------d~DLt~~a~t~~lF~~e-----kP 56 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK--------------------DADLTNLADTRALFESE-----KP 56 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc--------------------cccccchHHHHHHHhcc-----CC
Confidence 5799999999999999999999876 444443332 37999999999999775 45
Q ss_pred cEEEEcCcccCccchhccC--CHHHHHHHHhhhhh
Q psy612 147 DGVLHIAGISGLTSNILEA--NYKNFYSVLSSKIS 179 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~--t~~~~~~~l~~kv~ 179 (1005)
..|||.|...+ +.+.+. ..+-|...+.+|-.
T Consensus 57 thVIhlAAmVG--Glf~N~~ynldF~r~Nl~indN 89 (315)
T KOG1431|consen 57 THVIHLAAMVG--GLFHNNTYNLDFIRKNLQINDN 89 (315)
T ss_pred ceeeehHhhhc--chhhcCCCchHHHhhcceechh
Confidence 67888887654 445544 35556666655543
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.033 Score=66.23 Aligned_cols=76 Identities=12% Similarity=0.190 Sum_probs=54.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|+++|+|+++ +|+++|+.|+++|+.+.+..... +..++..+++.+.+ +.++..|..+ +..+.
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~~~ 68 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFLEG 68 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHhhc
Confidence 478999999887 99999999999998766554432 22333445565555 4467778776 12357
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
.|.||+++|+..
T Consensus 69 ~d~vv~~~g~~~ 80 (450)
T PRK14106 69 VDLVVVSPGVPL 80 (450)
T ss_pred CCEEEECCCCCC
Confidence 999999999754
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.033 Score=54.54 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=52.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++.++|.|+ ||.|++++.+|++.|++.|.++.|+. ..+++.+.+ .+..+.++. +.+.. +....
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~--~~~~~~~~~--~~~~~----------~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF--GGVNIEAIP--LEDLE----------EALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH--TGCSEEEEE--GGGHC----------HHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc--Cccccceee--HHHHH----------HHHhh
Confidence 5899999997 89999999999999999999999984 334444444 123344443 33321 12236
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
.|+||++.+...
T Consensus 76 ~DivI~aT~~~~ 87 (135)
T PF01488_consen 76 ADIVINATPSGM 87 (135)
T ss_dssp ESEEEE-SSTTS
T ss_pred CCeEEEecCCCC
Confidence 899999987654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.39 Score=52.28 Aligned_cols=187 Identities=22% Similarity=0.283 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
..+++-+++..||+.||+.+++++ .+++- +...+ .+.++..+..|++ |-+-+..|||+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId-----~~~aG---DLlnQ------------~i~s~f~ar~l~i--Pf~GlygACST 108 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID-----YLFAG---DLLNQ------------IISSSFAARDLGI--PFLGLYGACST 108 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S-----EEEEE---ETTCC------------CCHHHHHHHHHT----EEEB--CCCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe-----EEEeh---hhhhh------------hHHHHHHHHhcCC--CccchhhHHHH
Confidence 468888999999999999887765 45542 22211 1234444454443 78889999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
+..+|.+|...+..|-.|.++++.++-..+.+..+-|- -.-|.-||-. +. .---|+|++||.+. |
T Consensus 109 ~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P-----~EyG~Qrp~t--Aq--wTVTGaGa~il~~~------~ 173 (329)
T PF07451_consen 109 MMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP-----TEYGGQRPPT--AQ--WTVTGAGAAILSKE------G 173 (329)
T ss_dssp HHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGGT----TT------EE--EEEEEEEESS-------
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc-----hhccCCCCCc--cc--EEEeceEEEEEecC------C
Confidence 99999999999999999999999988766665544331 0112223322 22 23346777777643 2
Q ss_pred CceEEEEEEeeeccCCC--CCCCCCCCH------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy612 710 DPIHAIIRGSGINYDGK--TNGITAPNG------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 781 (1005)
Q Consensus 710 ~~I~avI~g~~~~~dG~--~~~~~~p~~------~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~ 781 (1005)
..++ |.+.-+ |+ ..+++.|+- ++-...|.+=+++-|.+|+|-|.|-+-.-|. +-.+-+.+.+
T Consensus 174 ~~p~--It~~T~---GkVvD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~-----vG~~il~~Ll 243 (329)
T PF07451_consen 174 SGPR--ITHATI---GKVVDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGK-----VGRKILRDLL 243 (329)
T ss_dssp -SEE--EEEEE-------B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HH-----HHHHHHHHHH
T ss_pred CCcE--EEEEEE---EEEEEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHH-----HHHHHHHHHH
Confidence 2222 333222 32 346777873 4556778899999999999999998744332 3334555665
Q ss_pred cc
Q psy612 782 KN 783 (1005)
Q Consensus 782 ~~ 783 (1005)
.+
T Consensus 244 ~~ 245 (329)
T PF07451_consen 244 KE 245 (329)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.072 Score=57.01 Aligned_cols=119 Identities=16% Similarity=0.176 Sum_probs=83.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+-++-|-|++|=+|+-++.+|++.|-.+||=.+-++... ..++-.| ++|.+...|+.|+++++++++.
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~------- 130 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH------- 130 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHHh-------
Confidence 446778899999999999999999886555544443222 2233223 5899999999999999998865
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 212 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~ 212 (1005)
-++|||.-|--.+. .+.+. -++|+.++-.|.+.+ ++.....||.+|+..+.
T Consensus 131 sNVVINLIGrd~eT---knf~f------~Dvn~~~aerlAric-------ke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 131 SNVVINLIGRDYET---KNFSF------EDVNVHIAERLARIC-------KEAGVERFIHVSCLGAN 181 (391)
T ss_pred CcEEEEeecccccc---CCccc------ccccchHHHHHHHHH-------HhhChhheeehhhcccc
Confidence 46899988753312 22222 257788888887774 33356679999987643
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.17 Score=58.07 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=76.7
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
....++++|+||+|++|+-+++.|.++|..+-.++++......... ..........+..|...+.++..- +.+..+
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~---~~~~~~ 151 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKK---LVEAVP 151 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhh---hhhhcc
Confidence 4466899999999999999999999999655555544433333222 111111233344455544333222 222222
Q ss_pred -CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 145 -PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 145 -~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
...+++-++|--. ... ...+ -..+...|+.++.+++. .....+||++||+.+...+.-
T Consensus 152 ~~~~~v~~~~ggrp-~~e-d~~~------p~~VD~~g~knlvdA~~-------~aGvk~~vlv~si~~~~~~~~ 210 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRP-EEE-DIVT------PEKVDYEGTKNLVDACK-------KAGVKRVVLVGSIGGTKFNQP 210 (411)
T ss_pred ccceeEEecccCCC-Ccc-cCCC------cceecHHHHHHHHHHHH-------HhCCceEEEEEeecCcccCCC
Confidence 3556677776443 221 1111 12345678888888853 236788999999887655443
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.041 Score=62.04 Aligned_cols=72 Identities=19% Similarity=0.247 Sum_probs=49.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++++||||+|.||..+|++|+++ |.+.+++..|+.. ..++.+++. ..|+.+ + .+.+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~---------~~~i~~---l-------~~~l~ 214 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG---------GGKILS---L-------EEALP 214 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc---------cccHHh---H-------HHHHc
Confidence 6799999999999999999999865 6778888888742 222222221 122221 2 13344
Q ss_pred CccEEEEcCcccC
Q psy612 145 PIDGVLHIAGISG 157 (1005)
Q Consensus 145 ~idgvIh~AG~~~ 157 (1005)
..|+|||+++...
T Consensus 215 ~aDiVv~~ts~~~ 227 (340)
T PRK14982 215 EADIVVWVASMPK 227 (340)
T ss_pred cCCEEEECCcCCc
Confidence 6899999998754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.065 Score=63.68 Aligned_cols=118 Identities=13% Similarity=0.087 Sum_probs=72.1
Q ss_pred ccCCCEEE----EECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 65 IKQGGTYL----ITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 65 ~~~~~~~l----ITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
++++..+| |+||.||+|.++++.|...|+.++.. .+.+.. . ..
T Consensus 31 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~-~~~~~~------~--------------------------~~ 77 (450)
T PRK08261 31 YRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVAN-NDGGLT------W--------------------------AA 77 (450)
T ss_pred CCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeec-Cccccc------c--------------------------cc
Confidence 44555555 88889999999999999999876553 322210 0 00
Q ss_pred hhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
....+++.+++-+-... +.+++ .+.+.+.+.+++. +. +.++||+++|..+.. +...
T Consensus 78 ~~~~~~~~~~~d~~~~~--------~~~~l--------~~~~~~~~~~l~~---l~--~~griv~i~s~~~~~---~~~~ 133 (450)
T PRK08261 78 GWGDRFGALVFDATGIT--------DPADL--------KALYEFFHPVLRS---LA--PCGRVVVLGRPPEAA---ADPA 133 (450)
T ss_pred CcCCcccEEEEECCCCC--------CHHHH--------HHHHHHHHHHHHh---cc--CCCEEEEEccccccC---CchH
Confidence 11224555554332111 12222 2333344444444 32 357899999987754 3456
Q ss_pred hhHHHHHHHHHHHHHHhcc
Q psy612 221 YAMGNRFQTVYAKYLNNKN 239 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g 239 (1005)
|+++|+++.+|++.+..+.
T Consensus 134 ~~~akaal~gl~rsla~E~ 152 (450)
T PRK08261 134 AAAAQRALEGFTRSLGKEL 152 (450)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998885
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.069 Score=55.78 Aligned_cols=116 Identities=21% Similarity=0.145 Sum_probs=80.5
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHH-----hCCCcEEEEEecCCCHHHHHHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLK-----KFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~-----~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
..+++.|++||||-+|-=|.-+|+.|+.+|..+--+++|+..- ...++.|- ..|+.....-.|+||...+.+++
T Consensus 23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 4567889999999999999999999999999887788887532 22233331 23566777889999999999999
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHH
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYAL 188 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~ 188 (1005)
..+ ..+-|.|.|.-.. ..--.++ -+-.-++...|++.|..+.
T Consensus 103 ~~i-----kPtEiYnLaAQSH-VkvSFdl----peYTAeVdavGtLRlLdAi 144 (376)
T KOG1372|consen 103 STI-----KPTEVYNLAAQSH-VKVSFDL----PEYTAEVDAVGTLRLLDAI 144 (376)
T ss_pred hcc-----Cchhhhhhhhhcc-eEEEeec----ccceeeccchhhhhHHHHH
Confidence 887 3556677765443 2111111 1123346677888887774
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.11 Score=58.66 Aligned_cols=117 Identities=14% Similarity=0.063 Sum_probs=73.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+.++|||++|.+|..++..|+.++. ..+++....+ .+....+|........ ..++++.++.. +.+...
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~~~~~~--i~~~~~~~d~~-------~~l~~a 87 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHINTPAQ--VRGFLGDDQLG-------DALKGA 87 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhCCcCce--EEEEeCCCCHH-------HHcCCC
Confidence 35799999999999999999998764 5688877665 2221223332222222 22333222222 334579
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 208 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SS 208 (1005)
|+|||.||... . .. ..+...+..|+.....+.+.+.. ...+.+|+++|
T Consensus 88 DiVVitAG~~~-~---~g---~~R~dll~~N~~i~~~i~~~i~~-------~~p~aivivvS 135 (323)
T PLN00106 88 DLVIIPAGVPR-K---PG---MTRDDLFNINAGIVKTLCEAVAK-------HCPNALVNIIS 135 (323)
T ss_pred CEEEEeCCCCC-C---CC---CCHHHHHHHHHHHHHHHHHHHHH-------HCCCeEEEEeC
Confidence 99999999865 2 12 23667889999988887777433 24555666666
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.16 Score=52.46 Aligned_cols=68 Identities=15% Similarity=0.294 Sum_probs=42.8
Q ss_pred ChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcCcc
Q psy612 76 GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGI 155 (1005)
Q Consensus 76 g~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~ 155 (1005)
.+|-.|.++|+.+..+|+.+.++.+...... ...+. ..++.+.+++.+.+.+... .-|++||+|.+
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---------p~~~~--~i~v~sa~em~~~~~~~~~---~~Di~I~aAAV 92 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP---------PPGVK--VIRVESAEEMLEAVKELLP---SADIIIMAAAV 92 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEE--EEE-SSHHHHHHHHHHHGG---GGSEEEE-SB-
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCccccc---------cccce--EEEecchhhhhhhhccccC---cceeEEEecch
Confidence 4678999999999999999888888753211 12343 3457777777777766544 34999999998
Q ss_pred cC
Q psy612 156 SG 157 (1005)
Q Consensus 156 ~~ 157 (1005)
..
T Consensus 93 sD 94 (185)
T PF04127_consen 93 SD 94 (185)
T ss_dssp -S
T ss_pred hh
Confidence 76
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.11 Score=56.28 Aligned_cols=188 Identities=20% Similarity=0.154 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCccc---cccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMA---INTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~---v~ta 626 (1005)
..-+..++..+||+++++.++++. -|++.++.|- ..-.+=.||...|||.--.-. -.-+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId----~vv~vtsTG~--------------~~Ps~dari~~~Lgl~p~~~Rvpv~glG 137 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDID----AVVTVTSTGL--------------ATPSLDARIVGELGLSPDTRRVPVWGLG 137 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCc----EEEEEeeccc--------------cCCChhHHHHhhcCCCCccceeeeecch
Confidence 446788999999999999887765 3444443331 111234567777777642222 2359
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC-Cc----eecCccEEEEEcc
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN-GL----VPSEAVVAVVLKR 701 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~-G~----~~gEGa~~vvLk~ 701 (1005)
|+.+..++..|.+..|..--..++|..++++.--. +|..+-+ .+ .+|+|++++|+.-
T Consensus 138 Caaga~glara~~y~ra~P~~~vlvV~vELCSLt~------------------~~~d~t~s~lVgtaLF~DG~AA~vv~g 199 (356)
T COG3424 138 CAAGAAGLARARDYCRAAPDANVLVVCVELCSLTY------------------VFADDTKSNLVGTALFGDGAAAVVVSG 199 (356)
T ss_pred hhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeee------------------ecCCCCcccceeeeeecCCeeEEEEec
Confidence 99999999999999999999999999999743211 1111111 22 4799999999864
Q ss_pred cchhhc---CCCceEE----------EEEEeeeccCCCCCC--CCCCCH--HHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 702 LSRALS---DGDPIHA----------IIRGSGINYDGKTNG--ITAPNG--ISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 702 l~~A~~---~g~~I~a----------vI~g~~~~~dG~~~~--~~~p~~--~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
-..+.. .+-.|+. -+-|+.++++|...- ---|+- ......+...|..-|++.+||+.+-+|=-
T Consensus 200 d~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPG 279 (356)
T COG3424 200 DRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPG 279 (356)
T ss_pred cccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCC
Confidence 222111 1111221 145777788775432 223432 23456678899999999999999999987
Q ss_pred CCCCCCHHH
Q psy612 765 GTKLGDPVE 773 (1005)
Q Consensus 765 gt~~gD~~E 773 (1005)
|-++-|.+|
T Consensus 280 G~KVida~~ 288 (356)
T COG3424 280 GPKVIDAYE 288 (356)
T ss_pred CchHHHHHH
Confidence 777665554
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.013 Score=61.93 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=65.0
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCc---cc
Q psy612 546 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPV---MA 622 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps---~~ 622 (1005)
...--..|..+++.+||+++|.++.++. -+++-++.|- . .--+-.++...|||+.-. ..
T Consensus 96 ~~~~a~~L~~~Aa~~AL~~~g~~~~dIt----hlv~vs~TG~-~-------------~PglD~~l~~~LgL~~~v~R~~i 157 (226)
T PF00195_consen 96 YAEEAPPLAEEAARKALAEAGLDPSDIT----HLVTVSCTGI-A-------------APGLDARLINRLGLRPDVQRTPI 157 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS-GGGEC----EEEEEESSSS-E-------------CS-HHHHHHHHHT--TTSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcccc----eEEEEecCCc-C-------------CCchhHHHHhcCCCCCCcEEEEE
Confidence 3344557888899999999999876653 3444443331 1 112445778888888744 33
Q ss_pred ccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCC
Q psy612 623 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMI 658 (1005)
Q Consensus 623 v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~ 658 (1005)
.--||..++.+|..|....++..-..+||..+++..
T Consensus 158 ~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 158 FGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp ES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred eccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 456999999999999999999999999999999754
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.057 Score=55.92 Aligned_cols=144 Identities=22% Similarity=0.279 Sum_probs=93.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.-.+|||||.|-+|..+|..|-.+ |...||+..-....+.. -..| -|+-.|+-|...+++.+- . .+|
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V----~~~G---PyIy~DILD~K~L~eIVV---n--~RI 111 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV----TDVG---PYIYLDILDQKSLEEIVV---N--KRI 111 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh----cccC---CchhhhhhccccHHHhhc---c--ccc
Confidence 457999999999999999999877 44556554322222211 1123 256679988877766552 2 389
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 216 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~---------- 216 (1005)
|-+||-..... .+. +...--..++|+.|..++.+.+..+ ++ -|++-|.-|.+|..
T Consensus 112 dWL~HfSALLS---AvG---E~NVpLA~~VNI~GvHNil~vAa~~-------kL--~iFVPSTIGAFGPtSPRNPTPdlt 176 (366)
T KOG2774|consen 112 DWLVHFSALLS---AVG---ETNVPLALQVNIRGVHNILQVAAKH-------KL--KVFVPSTIGAFGPTSPRNPTPDLT 176 (366)
T ss_pred ceeeeHHHHHH---Hhc---ccCCceeeeecchhhhHHHHHHHHc-------Ce--eEeecccccccCCCCCCCCCCCee
Confidence 99999765432 111 1112235689999999999885443 33 34555665655532
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 ---GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 ---g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+.+|--.+-+.++....
T Consensus 177 IQRPRTIYGVSKVHAEL~GEy~~hr 201 (366)
T KOG2774|consen 177 IQRPRTIYGVSKVHAELLGEYFNHR 201 (366)
T ss_pred eecCceeechhHHHHHHHHHHHHhh
Confidence 1357999998888888887765
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.077 Score=63.01 Aligned_cols=80 Identities=18% Similarity=0.135 Sum_probs=52.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|+++|||+++ +|+++|+.|+++|+++++...+........+.++..|.++.. .+ +...+ + . .++
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~--~~--~~~~~---~----~--~~~ 69 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVIC--GS--HPLEL---L----D--EDF 69 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEe--CC--CCHHH---h----c--CcC
Confidence 468999999976 999999999999997666644333333444567666654321 11 11111 1 1 148
Q ss_pred cEEEEcCcccCccch
Q psy612 147 DGVLHIAGISGLTSN 161 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~ 161 (1005)
|.||+++|+.. +.+
T Consensus 70 d~vV~s~gi~~-~~~ 83 (447)
T PRK02472 70 DLMVKNPGIPY-TNP 83 (447)
T ss_pred CEEEECCCCCC-CCH
Confidence 99999999876 443
|
|
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.17 Score=51.19 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceE-EEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCc--cc--cccc
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIG-MFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPV--MA--INTA 626 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~G-v~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps--~~--v~ta 626 (1005)
-+.+.++...|++.+++++ ++| +++|++.+-+.. -.++..+-.+|++.|++ .. +-.|
T Consensus 55 TmA~nAa~~ll~~~~id~~-----~Ig~l~vgTES~vD~s-------------Ks~~t~v~~ll~~s~~~~~~~~e~k~A 116 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPD-----DIGRLIVGTESGVDKS-------------KSISTYVHQLLGLSGNPDCRGVEMKQA 116 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHH-----HEEEEEEE-SS-SBSS-------------S-HHHHHHHHTTTTT-SSSEEEEEESG
T ss_pred HHHHHHHHHHHHHcCCCHH-----HccEEEEecccccccc-------------ccHHHHHHHHhCcCCCCceeeeehhhh
Confidence 5788999999999876554 455 556776543221 12567788899997743 33 4569
Q ss_pred chhHHHHHHHHHHHHhcCCcC--EEEEeecccC
Q psy612 627 CSSSLVATHIACQSLRQHECD--TAISAGVNLM 657 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d--~alvggv~~~ 657 (1005)
|-++..||..|+.+++++..| .+||.+.++.
T Consensus 117 CygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 117 CYGGTAALQNAVNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp GGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence 999999999999999999765 8999999974
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.34 Score=54.88 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=55.3
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+||+||+|....+.....|+++++.+++++. .. .+++.|..... |..+++ + .+++++..
T Consensus 139 ~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k---~~-~~~~lGAd~vi---~y~~~~-~---~~~v~~~t 207 (326)
T COG0604 139 GLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK---LE-LLKELGADHVI---NYREED-F---VEQVRELT 207 (326)
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH---HH-HHHhcCCCEEE---cCCccc-H---HHHHHHHc
Confidence 46789999999999999999998888889877777777642 22 56667764332 233332 3 33333322
Q ss_pred -C-CccEEEEcCcc
Q psy612 144 -G-PIDGVLHIAGI 155 (1005)
Q Consensus 144 -g-~idgvIh~AG~ 155 (1005)
| .+|.|+..-|.
T Consensus 208 ~g~gvDvv~D~vG~ 221 (326)
T COG0604 208 GGKGVDVVLDTVGG 221 (326)
T ss_pred CCCCceEEEECCCH
Confidence 2 59999987764
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.44 Score=54.35 Aligned_cols=83 Identities=19% Similarity=0.201 Sum_probs=55.8
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++.+||.||+||+|.+..+-....|+.+++.+++.+. .+.+++.|... ..|-.+++-++...+.. .
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~----~~l~k~lGAd~---vvdy~~~~~~e~~kk~~---~ 223 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK----LELVKKLGADE---VVDYKDENVVELIKKYT---G 223 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch----HHHHHHcCCcE---eecCCCHHHHHHHHhhc---C
Confidence 47788999999999999999888777778556665555432 23344556432 34666644333332221 5
Q ss_pred CCccEEEEcCccc
Q psy612 144 GPIDGVLHIAGIS 156 (1005)
Q Consensus 144 g~idgvIh~AG~~ 156 (1005)
+++|+|+.|.|-.
T Consensus 224 ~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS 236 (347)
T ss_pred CCccEEEECCCCC
Confidence 7999999999863
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.34 Score=53.34 Aligned_cols=74 Identities=14% Similarity=0.258 Sum_probs=48.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
..+++++|+|+ ||+|++++..|++.|. .+.+..|+. ..+++.+.+...+. +.....| + ....
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---------~~~~ 177 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---------LPLH 177 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---------hccc
Confidence 45789999998 7999999999999997 566666653 33455555544332 2222111 1 0124
Q ss_pred CccEEEEcCccc
Q psy612 145 PIDGVLHIAGIS 156 (1005)
Q Consensus 145 ~idgvIh~AG~~ 156 (1005)
..|+|||+.+..
T Consensus 178 ~~DivInatp~g 189 (270)
T TIGR00507 178 RVDLIINATSAG 189 (270)
T ss_pred CccEEEECCCCC
Confidence 689999999764
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.72 Score=51.94 Aligned_cols=115 Identities=13% Similarity=0.064 Sum_probs=63.5
Q ss_pred EEEEECChhHHHHHHHHHHHH-cC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 70 TYLITGGTGRLGMLFSDYLIN-KY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~-~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.++|.|++|++|.+++..|.. .+ +..+++..+++......-.+...+....+..++-.| + .+.....|
T Consensus 2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l~~~D 71 (312)
T PRK05086 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED---P-------TPALEGAD 71 (312)
T ss_pred EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCC---H-------HHHcCCCC
Confidence 578999999999999999865 33 356677776543211111232212111111122222 1 12223599
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 208 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SS 208 (1005)
.||.++|... .. .++. ...+..|+.....+.+.+ .+...+.+|.+.|
T Consensus 72 iVIitaG~~~-~~---~~~R---~dll~~N~~i~~~ii~~i-------~~~~~~~ivivvs 118 (312)
T PRK05086 72 VVLISAGVAR-KP---GMDR---SDLFNVNAGIVKNLVEKV-------AKTCPKACIGIIT 118 (312)
T ss_pred EEEEcCCCCC-CC---CCCH---HHHHHHHHHHHHHHHHHH-------HHhCCCeEEEEcc
Confidence 9999999865 22 1232 345666776666666553 2224455666655
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=92.53 E-value=0.71 Score=51.94 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=55.2
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+.++++++|+|+++++|+++++.+...|++++++ .+++.. .+.+...+.. ...|..+.+..+.+.+....
T Consensus 163 ~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~-~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-- 233 (342)
T cd08266 163 RLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIAT-AGSEDK---LERAKELGAD---YVIDYRKEDFVREVRELTGK-- 233 (342)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE-eCCHHH---HHHHHHcCCC---eEEecCChHHHHHHHHHhCC--
Confidence 35678899999999999999999999999875444 444321 2233334432 12466666655555544322
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|+++|.
T Consensus 234 ~~~d~~i~~~g~ 245 (342)
T cd08266 234 RGVDVVVEHVGA 245 (342)
T ss_pred CCCcEEEECCcH
Confidence 369999999873
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.48 Score=47.11 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=48.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++.++|+|+ |++|..+++.|.+.|...+.+..|+.. .++..+++.... +..+.++.+++ ...
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~~ 81 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------LAE 81 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------ccc
Confidence 4678899997 899999999999987666777777642 233333332211 22334443322 357
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
.|.||++.....
T Consensus 82 ~Dvvi~~~~~~~ 93 (155)
T cd01065 82 ADLIINTTPVGM 93 (155)
T ss_pred CCEEEeCcCCCC
Confidence 999999986543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.64 Score=52.49 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=51.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.++||+|++|++|..+++.....|++++++. +++. ..+.+++.|....+ |-.+.+...+.+.....
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~-~s~~---~~~~~~~lGa~~vi---~~~~~~~~~~~~~~~~~-- 205 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAA-GSDE---KVAYLKKLGFDVAF---NYKTVKSLEETLKKASP-- 205 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEe-CCHH---HHHHHHHcCCCEEE---eccccccHHHHHHHhCC--
Confidence 356789999999999999999988878888654444 3332 23444556754322 22222233344443321
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|.+.|.
T Consensus 206 ~gvdvv~d~~G~ 217 (325)
T TIGR02825 206 DGYDCYFDNVGG 217 (325)
T ss_pred CCeEEEEECCCH
Confidence 369999998763
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.49 Score=52.39 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=48.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++.++|+|+ ||+|++++..|++.|...|.++.|+.. .+++.+++...+ .+. .++ + ..+....
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~-~----------~~~~~~~ 185 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL-E----------LQEELAD 185 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc-c----------chhcccc
Confidence 5688999986 999999999999999778888888742 333444443221 111 111 0 0122346
Q ss_pred ccEEEEcCccc
Q psy612 146 IDGVLHIAGIS 156 (1005)
Q Consensus 146 idgvIh~AG~~ 156 (1005)
.|+|||+....
T Consensus 186 ~DivInaTp~g 196 (278)
T PRK00258 186 FDLIINATSAG 196 (278)
T ss_pred CCEEEECCcCC
Confidence 89999988654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.32 Score=55.05 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=27.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCc------EEEEecCCC
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYST------NLILSGRSK 103 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~------~vil~~r~~ 103 (1005)
.++|||++|.+|..++..|+.++.. .+++..+.+
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 3799999999999999999987642 566666643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.72 Score=52.39 Aligned_cols=83 Identities=16% Similarity=0.127 Sum_probs=51.3
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++.++||+|++|++|..+++.+...|+++++++ +++. ..+.+++ .|.... .|-.+.+...+.+.....
T Consensus 148 ~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~-~~~~---~~~~~~~~lGa~~v---i~~~~~~~~~~~i~~~~~- 219 (338)
T cd08295 148 KPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSA-GSDE---KVDLLKNKLGFDDA---FNYKEEPDLDAALKRYFP- 219 (338)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe-CCHH---HHHHHHHhcCCcee---EEcCCcccHHHHHHHhCC-
Confidence 467889999999999999999988888898654444 4332 2333444 565322 232222233333333322
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
+++|.+|.+.|.
T Consensus 220 -~gvd~v~d~~g~ 231 (338)
T cd08295 220 -NGIDIYFDNVGG 231 (338)
T ss_pred -CCcEEEEECCCH
Confidence 469999998763
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.57 Score=52.67 Aligned_cols=78 Identities=26% Similarity=0.361 Sum_probs=50.1
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+.++.+++|+|++|++|+++++.+...|.+++.+. +++. ..+.++..+.... + |. +++.+.+ .+.
T Consensus 159 ~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~-~~~~---~~~~~~~~~~~~~-~--~~---~~~~~~~----~~~ 224 (332)
T cd08259 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT-RSPE---KLKILKELGADYV-I--DG---SKFSEDV----KKL 224 (332)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEe-CCHH---HHHHHHHcCCcEE-E--ec---HHHHHHH----Hhc
Confidence 456788999999999999999999999998765554 4432 2233444454221 1 21 1122222 223
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+.+|.+|+++|.
T Consensus 225 ~~~d~v~~~~g~ 236 (332)
T cd08259 225 GGADVVIELVGS 236 (332)
T ss_pred cCCCEEEECCCh
Confidence 479999999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.81 Score=50.91 Aligned_cols=83 Identities=13% Similarity=0.076 Sum_probs=53.2
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+.++++++|+|+++++|.++++.+...|+++++ +.+++. ..+.+...|... .+|..+.+..+.+.+.. . .
T Consensus 141 ~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~-~~~~~~---~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~-~-~ 211 (325)
T cd08253 141 GAKAGETVLVHGGSGAVGHAAVQLARWAGARVIA-TASSAE---GAELVRQAGADA---VFNYRAEDLADRILAAT-A-G 211 (325)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EeCCHH---HHHHHHHcCCCE---EEeCCCcCHHHHHHHHc-C-C
Confidence 4567899999999999999999999999876544 444432 223334445432 24555544444433332 2 2
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
..+|.+|+++|.
T Consensus 212 ~~~d~vi~~~~~ 223 (325)
T cd08253 212 QGVDVIIEVLAN 223 (325)
T ss_pred CceEEEEECCch
Confidence 369999999864
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.66 E-value=1.1 Score=51.13 Aligned_cols=82 Identities=15% Similarity=0.164 Sum_probs=50.6
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++.++||+|++|++|..+++.....|++++++ .+++. ..+.++ +.|....+ |-.+.+.+.+.+.....
T Consensus 155 ~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~-~~~~~---k~~~~~~~lGa~~vi---~~~~~~~~~~~i~~~~~- 226 (348)
T PLN03154 155 SPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQ---KVDLLKNKLGFDEAF---NYKEEPDLDAALKRYFP- 226 (348)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE-cCCHH---HHHHHHHhcCCCEEE---ECCCcccHHHHHHHHCC-
Confidence 35678999999999999999998888888864444 33321 223333 45654322 32222233333333322
Q ss_pred cCCccEEEEcCc
Q psy612 143 IGPIDGVLHIAG 154 (1005)
Q Consensus 143 ~g~idgvIh~AG 154 (1005)
+++|.+|.+.|
T Consensus 227 -~gvD~v~d~vG 237 (348)
T PLN03154 227 -EGIDIYFDNVG 237 (348)
T ss_pred -CCcEEEEECCC
Confidence 36999999887
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=90.48 E-value=1.6 Score=48.49 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=52.3
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+.++++++|+|+++++|+.+++.+...|+.+ +++.++.. ..+.++..+... ..|..+.+....+. .... .
T Consensus 136 ~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v-~~~~~~~~---~~~~~~~~g~~~---~~~~~~~~~~~~~~-~~~~-~ 206 (323)
T cd05276 136 GLKAGETVLIHGGASGVGTAAIQLAKALGARV-IATAGSEE---KLEACRALGADV---AINYRTEDFAEEVK-EATG-G 206 (323)
T ss_pred CCCCCCEEEEEcCcChHHHHHHHHHHHcCCEE-EEEcCCHH---HHHHHHHcCCCE---EEeCCchhHHHHHH-HHhC-C
Confidence 35678999999999999999999999999874 44444432 223334445432 23444433333332 2222 2
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|+++|.
T Consensus 207 ~~~d~vi~~~g~ 218 (323)
T cd05276 207 RGVDVILDMVGG 218 (323)
T ss_pred CCeEEEEECCch
Confidence 469999999873
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.37 E-value=1.2 Score=50.78 Aligned_cols=78 Identities=14% Similarity=0.224 Sum_probs=51.1
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++++|+|+ |++|+..++.+...|+++|+.+.+++.. .+.+++.|.... .|..+. ++.++. +..|.
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~---~~~a~~lGa~~v---i~~~~~-~~~~~~----~~~g~ 235 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRS---LSLAREMGADKL---VNPQND-DLDHYK----AEKGY 235 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHH---HHHHHHcCCcEE---ecCCcc-cHHHHh----ccCCC
Confidence 46889999986 9999999988888899777776666432 334455675432 233332 222222 22357
Q ss_pred ccEEEEcCcc
Q psy612 146 IDGVLHIAGI 155 (1005)
Q Consensus 146 idgvIh~AG~ 155 (1005)
+|.+|.++|.
T Consensus 236 ~D~vid~~G~ 245 (343)
T PRK09880 236 FDVSFEVSGH 245 (343)
T ss_pred CCEEEECCCC
Confidence 9999999874
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.12 E-value=1.7 Score=50.52 Aligned_cols=83 Identities=18% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
..+++||||+...+|+.+++.|.+.|.+++++...........+.+ .....+...-.+.+...+.+.++.+++ ++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i 77 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NI 77 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence 4589999999999999999999999987766655432221111111 112222222345555555555555554 58
Q ss_pred cEEEEcCc
Q psy612 147 DGVLHIAG 154 (1005)
Q Consensus 147 dgvIh~AG 154 (1005)
|+||-...
T Consensus 78 d~vIP~~e 85 (389)
T PRK06849 78 DLLIPTCE 85 (389)
T ss_pred CEEEECCh
Confidence 99998653
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=89.82 E-value=1.3 Score=50.27 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=49.6
Q ss_pred ccCC--CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 65 IKQG--GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 65 ~~~~--~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
++++ .++||+|++|++|..+++.....|+.+++.+.+++. ..+.+++ .|....+ |-.+ +++.+.+.++..
T Consensus 150 ~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~---~~~~~~~~lGa~~vi---~~~~-~~~~~~i~~~~~ 222 (345)
T cd08293 150 ITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE---KCQLLKSELGFDAAI---NYKT-DNVAERLRELCP 222 (345)
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH---HHHHHHHhcCCcEEE---ECCC-CCHHHHHHHHCC
Confidence 4444 899999999999999988877788855555544432 2233333 5654322 2222 223333333322
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
+++|.+|.+.|.
T Consensus 223 --~gvd~vid~~g~ 234 (345)
T cd08293 223 --EGVDVYFDNVGG 234 (345)
T ss_pred --CCceEEEECCCc
Confidence 469999998763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1005 | ||||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 5e-81 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 1e-78 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 1e-63 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-61 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 5e-24 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 7e-23 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 2e-22 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 2e-20 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 6e-19 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 6e-18 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 9e-18 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 8e-17 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 1e-16 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-16 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 7e-16 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 9e-15 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-14 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 1e-14 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 1e-14 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 2e-14 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 2e-14 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 3e-14 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 2e-13 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 4e-13 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 4e-13 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 8e-13 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 1e-12 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 3e-12 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 4e-12 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 5e-12 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 7e-12 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 7e-12 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 8e-12 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 8e-12 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 1e-11 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 1e-11 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 4e-11 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 6e-11 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 2e-10 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-10 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 3e-10 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 1e-05 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 3e-04 |
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 492 bits (1268), Expect = e-158
Identities = 149/518 (28%), Positives = 247/518 (47%), Gaps = 63/518 (12%)
Query: 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPIKSSNKIN 519
+ E + I GMSG+ P + N+ EFW LI D++++ WK Y P
Sbjct: 2 TGEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDR---RWKAGLYGLP-------- 50
Query: 520 SKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGM 579
+ G + + FD FF + P +A MDP+ R LL+ ++ A+ D G P+ + G+
Sbjct: 51 -RRSGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGV 109
Query: 580 FVGVEEGSNYQDRLDQV-------NLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLV 632
+VGV GS + L + ++ A+++ RL++F D +GP +A++TACSSSL+
Sbjct: 110 WVGVS-GSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLM 168
Query: 633 ATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSE 692
A A Q++ +C AI G+N+++ P + GMLSP+G C FD NG SE
Sbjct: 169 ALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSE 228
Query: 693 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNL 751
VVAV+L + S A ++A I +G N DG K G+T P+G Q +LI+S+Y+ + +
Sbjct: 229 GVVAVLLTKKSLA----RRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGV 284
Query: 752 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ---KFCAITSNKSNIGHTFAASG 808
PE YI HGTGTK+GDP E+N + + I S KSN+GH ASG
Sbjct: 285 APESFEYIEAHGTGTKVGDPQELNGITR-----ALCATRQEPLLIGSTKSNMGHPEPASG 339
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN-----TVNEKL--- 860
L +L ++ S+++ + +LH N I V++ L
Sbjct: 340 LAALAKVLLSLEHGLWAPNLHFHSPNPEI-------------PALLDGRLQVVDQPLPVR 386
Query: 861 -RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMK 919
+++FG G+N HI+L+ + ++ S +T ++++ ++
Sbjct: 387 GGNVGINSFGFGGSNVHIILRPNTQP-----PPAPAPHATLPRLLRASGRTPEAVQKLLE 441
Query: 920 QILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAIIISS 957
Q L + + + N + + +R ++
Sbjct: 442 QGLRHSQDLAFLSMLNDIAAV--PATAMPFRGYAVLGG 477
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 515 bits (1328), Expect = e-158
Identities = 149/506 (29%), Positives = 244/506 (48%), Gaps = 43/506 (8%)
Query: 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPIKSSNKINSK 521
E + I GMSG+ P + N+ EFW LI D+++ WK Y P +
Sbjct: 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDR---RWKAGLYGLP---------R 49
Query: 522 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 581
G + + FD FF + +A MDP+ R LL+ ++ A+ D G P + G++V
Sbjct: 50 RMGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWV 109
Query: 582 GVEEGSNYQDRLDQV-------NLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
GV S+ + L + ++ A+++ RL++F D KGP + I+TACSSSL+A
Sbjct: 110 GVS-SSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLAL 168
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694
A Q++R EC A+ G+N+++ P + + GMLS DG C FD G +EAV
Sbjct: 169 QSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAV 228
Query: 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNP 753
VAV+L + S A ++A I +G N DG K G+T P+G Q +LI+S+Y + +P
Sbjct: 229 VAVLLTKKSLA----RRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDP 284
Query: 754 EDINYIITHGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812
E + YI HGTGTK+GDP E+N + + + ++ I S KSN+GH ASG+ +L
Sbjct: 285 ESLEYIEAHGTGTKVGDPQELNGIVNALCATR---REPLLIGSTKSNMGHPEPASGVAAL 341
Query: 813 INLVQSIKYKIIPASLHCEKENNYI-ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMS 871
I ++ S+++ + +LH N I L++ + +++FG
Sbjct: 342 IKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRG-----GNVGINSFGFG 396
Query: 872 GTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV 931
G+N H++LQ + ++ S +T +++ ++Q L R V
Sbjct: 397 GSNVHVILQPNSRP-----APPPAQHAALPRLLQASGRTLEAVQTLLEQGLRHSRDLAFV 451
Query: 932 CIENFVYTLMQGRHHFQYRCAIIISS 957
+ N +R ++
Sbjct: 452 GMLN--EIAAVSPVAMPFRGYAVLGG 475
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 2e-16
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 29/173 (16%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQ 123
+Y+ITGG G G+ + +L + + L+L+ RS + + ++ ++ + +
Sbjct: 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVST 1943
Query: 124 VDVSDKL---KMISEINSIINNIGPIDGVLHIAG------ISGLTSNILEANYKNFYSVL 174
+ S +I+E +GP+ GV ++A + T + V
Sbjct: 1944 SNASSLDGARSLITEATQ----LGPVGGVFNLAMVLRDAVLENQTPEFFQD-------VS 1992
Query: 175 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227
K SGT L+ +L FV FSS S G+ G +Y N
Sbjct: 1993 KPKYSGTANLDRVTREACPELDY----FVI-FSSVSCGRGNAGQANYGFANSA 2040
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 478 bits (1233), Expect = e-154
Identities = 170/517 (32%), Positives = 280/517 (54%), Gaps = 41/517 (7%)
Query: 461 SEELIAIIGMSGRFP-AARNINEFWKILINNKDVISEIPEKIFD--WKLYYENPIKSSNK 517
+ E IAI+GM+ RFP + FW+ + D I+E P D W+ +P
Sbjct: 37 AGEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPA---DRGWEP---DP------ 84
Query: 518 INSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKI 577
+++ G + +FD FF ISP EA MDP+QR +L+ SW ALE AG+ P +
Sbjct: 85 -DARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSAT 143
Query: 578 GMFVGVEEGSNYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSSS 630
G+F GV +Y R D+ T T +++ S R+AY + L+GP M ++TACSS
Sbjct: 144 GVFTGVG-TVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSG 202
Query: 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVP 690
L A H+A +SLR+ EC A++ GV +M SP A+ S G L+ DG+C F + A+G
Sbjct: 203 LTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGL 262
Query: 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSN 750
+E +VL+RLS A +G P+ A++RGS +N DG +NG+TAP+G +Q +I+ + +
Sbjct: 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAG 322
Query: 751 LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF-----CAITSNKSNIGHTFA 805
+ D++Y+ HGTGT+LGDP+E++AL TY + I S KSNIGHT A
Sbjct: 323 VRAGDVDYVEAHGTGTRLGDPIEVHALLS-----TYGAERDPDDPLWIGSVKSNIGHTQA 377
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 865
A+G+ ++ V ++++ +P +LH ++ + I + + W E+ R V
Sbjct: 378 AAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSW-PAGERPRRAGV 436
Query: 866 SAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 925
S+FG+SGTNAH++++E + +VLS + + +++ + ++ L
Sbjct: 437 SSFGISGTNAHVIVEEAPEA-----DEPEPAPDSGPVPLVLSGRDEQAMRAQAGRLADHL 491
Query: 926 RKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVV 962
+ + + +TL R +++R A+++ +E +
Sbjct: 492 AREPRNSLRDTGFTLATRRSAWEHR-AVVVGDRDEAL 527
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 475 bits (1225), Expect = e-153
Identities = 170/523 (32%), Positives = 270/523 (51%), Gaps = 41/523 (7%)
Query: 461 SEELIAIIGMSGRFP-AARNINEFWKILINNKDVISEIPEKIFD--W---KLYYENPIKS 514
+ IAI+ M+ R P W++L + +S P D W +L++ +P +
Sbjct: 4 ESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPT---DRGWDLARLHHPDP-DN 59
Query: 515 SNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIAN 574
G + FD FF +SP EA MDP+QR LL+ SW +E+AG P+ +
Sbjct: 60 PGTSYVDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRG 119
Query: 575 QKIGMFVGVEEGSNYQDRLDQVN------LTSTHNAILSARLAYFMDLKGPVMAINTACS 628
G+F+GV Y + +T A+ S R++Y M L+GP ++++TACS
Sbjct: 120 TATGVFLGVA-KFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACS 178
Query: 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGL 688
SSLVA H+A +SLR+ E A+ G +M +P ++ + L+ DG+ F A+G
Sbjct: 179 SSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGF 238
Query: 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK 748
SE V V+L+RLS A +G + A++RGS +N DG +NG++AP+G +Q +I+ +
Sbjct: 239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALES 298
Query: 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF-----CAITSNKSNIGHT 803
L P D++ + HGTGT LGDP+E NAL D TY + + S KSNIGHT
Sbjct: 299 CGLEPGDVDAVEAHGTGTALGDPIEANALLD-----TYGRDRDADRPLWLGSVKSNIGHT 353
Query: 804 FAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIG 863
AA+G+ L+ +V +++ +PA+LH E+ ++ + + N+ W E+ R
Sbjct: 354 QAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPW-RRGERTRRA 412
Query: 864 AVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILL 923
AVSAFG+SGTNAH++++E T +V+SA++ +L+ + QI
Sbjct: 413 AVSAFGISGTNAHVIVEEAPERE----HRETTAHDGRPVPLVVSARSTAALRAQAAQIAE 468
Query: 924 FLRKNNT----VCIENFVYTLMQGRHHFQYRCAIIISSIEEVV 962
L + + V L R ++R A++ S+ EE V
Sbjct: 469 LLERPDADLAGVG-----LGLATTRARHEHRAAVVASTREEAV 506
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 1e-36
Identities = 90/453 (19%), Positives = 161/453 (35%), Gaps = 88/453 (19%)
Query: 467 IIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSI 526
I GM G +E L ++ + +P+ +D ++++ +
Sbjct: 10 ITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD--WD----------YFESLHTRLAAPL 57
Query: 527 PGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN-QIANQKIGMFVGVEE 585
PG F + M + ++ S LAL DAG+ + I++ ++G+ G
Sbjct: 58 PG---FAQPAD-WPRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSS 113
Query: 586 GS-----NYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINT 625
GS + L+ + T+ + ++ F DLKG ++ ++
Sbjct: 114 GSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSL-------FWDLKGRIVPTSS 166
Query: 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS-----PD 675
AC+S A A +++ + ++ G E A + S P
Sbjct: 167 ACASGSQAIGYAYENIAMGKQTLMLAGGA------EELSGPAVAVFDTLYATSTRNDEPH 220
Query: 676 GKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNG 735
FD + +GLV E +VL+ A + G IHA I G G N DG +T P
Sbjct: 221 LTPRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDG--AHMTQPTA 278
Query: 736 ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITS 795
+ ++ + + L+ I Y+ HGT T GD E A F + I+S
Sbjct: 279 STMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGERM------PISS 332
Query: 796 NKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE------KENNYIILKNSPFYINKS 849
KS +GHT A G + ++ +K +L+ +YI ++
Sbjct: 333 LKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYI--------RGEA 384
Query: 850 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
+ F G N ++ +
Sbjct: 385 RAI------DAEYVMSNNFAFGGINTSLIFRRV 411
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-36
Identities = 104/435 (23%), Positives = 170/435 (39%), Gaps = 65/435 (14%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + ++W+ L+ ++ I I FD ++ ++ G + FD
Sbjct: 19 PIGNTLQDYWQGLMEGRNGIGPI--TRFD-----------ASDQACRFGGEVKD---FDA 62
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
F + EA+RMD + S A+ DA N++ +IG+ +G ++
Sbjct: 63 TQF-LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQ 121
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
+ D+ + N+ S AI + KGP TAC++ A
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAI-------NLGAKGPNNCTVTACAAGSNAI 174
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A + ++ I G I+P +Y SA LS P FD+ +G V
Sbjct: 175 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFV 234
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 747
E ++L+ L AL+ G I+ + G + D ITAP +G T I K
Sbjct: 235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDA--YHITAPVPDGRGATRAIAWALK 292
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
S L PE ++YI HGT T D E A+ N YN A++S KS GH S
Sbjct: 293 DSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYN---IAVSSTKSMTGHLLGGS 349
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 867
G + + V +I +P +++ E + L P +S + + ++
Sbjct: 350 GGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP---GQSRAL------IVDVALSNS 400
Query: 868 FGMSGTNAHIVLQEY 882
FG G N + ++Y
Sbjct: 401 FGFGGHNVTLAFKKY 415
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-36
Identities = 90/434 (20%), Positives = 169/434 (38%), Gaps = 64/434 (14%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P ++ W+ + + I +I D + + G + F+
Sbjct: 40 PIGNDVKTTWENALKGVNGIDKI--TRID-----------TEPYSVHLAGELKN---FNI 83
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
I EA RMD ++ + + A++DA N+ +IG+++G
Sbjct: 84 EDH-IDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIA 142
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
D+ + ++ + +I + KGP A TAC++ +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSI-------DLGAKGPNGATVTACATGTNSI 195
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 690
A + +++ + D I+ G I+ A +++ LS + C F E +G V
Sbjct: 196 GEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVM 255
Query: 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 748
E +V++ L A + G I+A I G G D ITAP G + +++
Sbjct: 256 GEGAGILVIESLESAQARGANIYAEIVGYGTTGDA--YHITAPAPEGEGGSRAMQAAMDD 313
Query: 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 808
+ + P+D+ Y+ HGT T +GD E+ A+ + F + ++S KS GH A+G
Sbjct: 314 AGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKH---LKVSSTKSMTGHLLGATG 370
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 868
+ I SIK + ++H + L P N++ + ++
Sbjct: 371 GIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP---NEAQDL------DITYAMSNSL 421
Query: 869 GMSGTNAHIVLQEY 882
G G NA +V +++
Sbjct: 422 GFGGHNAVLVFKKF 435
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 3e-36
Identities = 73/440 (16%), Positives = 145/440 (32%), Gaps = 81/440 (18%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + +W +++ + + + FD ++ + G I F
Sbjct: 21 PNGLGLAPYWSAVLDGRHGLGPV--TRFD-----------VSRYPATLAGQIDD---FHA 64
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 589
I + DP R L + AL+DA P + + +G+ G +
Sbjct: 65 PDH-IPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHRE 123
Query: 590 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
+L + + +I ++GP A+ +
Sbjct: 124 FRKLWSEGPKSVSVYESFAWFYAVNTGQISI-------RHGMRGPSSALVAEQAGG---L 173
Query: 635 HIACQSLR--QHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGL 688
+ R + +S GV+ + P +++ ++G +S PD FDERA G
Sbjct: 174 DALGHARRTIRRGTPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGY 233
Query: 689 VPSEAVVAVVLKRLSRALSDG-DPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYK 747
VP E +VL+ + A + G + + G +D + I+
Sbjct: 234 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDP--APGSGR-PAGLERAIRLALN 290
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
+ PED++ + G G D E A+ VF + +T K+ G ++
Sbjct: 291 DAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGV-----PVTVPKTTTGRLYSGG 345
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTVNEKLRI 862
G + ++ + S++ +I + + ++ + R
Sbjct: 346 GPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL--------GEPRST------APRT 391
Query: 863 GAVSAFGMSGTNAHIVLQEY 882
V A G G N+ VL+ +
Sbjct: 392 ALVLARGRWGFNSAAVLRRF 411
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-36
Identities = 91/434 (20%), Positives = 169/434 (38%), Gaps = 64/434 (14%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + W+ + ++++ + + K + FD
Sbjct: 16 PIGNDAETSWENAKKGVNGVAKM--TRLN-----------PDDFPVKIAAELKD---FDV 59
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
+ + EA +MD + + + +A++D+G + ++G+++G +
Sbjct: 60 EKY-LEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQ 118
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
+ +R + ++ S +I KG TAC+++ +
Sbjct: 119 YEIFLNRGHRRVSPFFVPMMIPDMGSGQVSI-------RFGAKGINSTTVTACATATNSI 171
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 690
A + + + + D I+ G I+ + T+ LS P+ C FD+ +G +
Sbjct: 172 GDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFII 231
Query: 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 748
E V+L+ A + G I+A I G G D ITAP NG +K
Sbjct: 232 GEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDA--YHITAPAPNGEGAARAMKMAIDD 289
Query: 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 808
+ L P+ ++YI HGT T D E A+ VF AI+S KS GHT ASG
Sbjct: 290 AGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKK---LAISSTKSMTGHTLGASG 346
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 868
+ I + +I+ II ++H + ++ L P N++ + + + ++F
Sbjct: 347 GIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVP---NEAREA------NVNVVISNSF 397
Query: 869 GMSGTNAHIVLQEY 882
G G NA +V +
Sbjct: 398 GFGGHNATLVFKRI 411
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 4e-35
Identities = 87/450 (19%), Positives = 168/450 (37%), Gaps = 69/450 (15%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ I G+ R P +FW++L + + I FD + S+
Sbjct: 5 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRI--SFFD-----------PSPYRSQVAA 51
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV- 583
D P E +RMD + + + A +G P+ + ++G+ +G
Sbjct: 52 EA---DFDPVAEG-FGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 107
Query: 584 --------EEGSNYQDRLDQVNLTSTH-----------NAILSARLAYFMDLKGPVMAIN 624
E D + + + ++ A +A+ + +GPV ++
Sbjct: 108 VAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPS-VMPAEVAWAVGAEGPVTMVS 166
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCY 679
T C+S L + A +++ + D + + I+P + + P+
Sbjct: 167 TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASR 226
Query: 680 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGIS 737
FD +G V +E VL+ AL+ G IHA I G + +T +G
Sbjct: 227 PFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNA--YHMTGLKADGRE 284
Query: 738 QTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNK 797
E I+ +S + DI+YI HG+GT+ D E A ++S K
Sbjct: 285 MAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARR---TPVSSIK 341
Query: 798 SNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKK 852
S +GH+ A G + + V ++++ ++P + + + +Y+ P ++ ++
Sbjct: 342 SMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYV-----P---LEARER 393
Query: 853 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
KLR G G + +VL++
Sbjct: 394 ------KLRSVLTVGSGFGGFQSAMVLRDA 417
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 7e-35
Identities = 99/433 (22%), Positives = 168/433 (38%), Gaps = 67/433 (15%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P F K + K + I FD ++ + + + DP
Sbjct: 14 PIGVGQEAFHKAQLAGKSGVRPI--TRFD-----------ASALPVRIAAEVD----VDP 56
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
+ + E R+D ++ L + LALEDAG P + +++G VG +
Sbjct: 57 GAY-LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQ 115
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
+ +R + N+ S H A+ GP + TAC++ A
Sbjct: 116 SRVFLERGPNRISPFFIPMMIANMASAHIAM-------RYGFTGPSSTVVTACATGADAL 168
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A + ++ E D ++ G I+P A A LS P+ F +G V
Sbjct: 169 GSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFV 228
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 747
E +VL+ A G I+A + G G + D + IT P G + K
Sbjct: 229 MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADA--HHITEPHPEGKGAALAMARALK 286
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
+ + PE + YI HGT T +GD E+ A+ VF + ++S KS IGH A+
Sbjct: 287 DAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKR---LMVSSTKSMIGHLLGAA 343
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 867
G V I VQ++ + +IP +++ E + + L ++ + + K+ ++
Sbjct: 344 GAVEAIATVQALYHGVIPPTINLEDPDPELDLD----FVPEPREA------KVDYALSNS 393
Query: 868 FGMSGTNAHIVLQ 880
F G NA + +
Sbjct: 394 FAFGGHNAVLAFK 406
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-34
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 61/441 (13%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFD---WKLYYENPIKSSNKINSKWYGSIP---G 528
P R + W+ LI+ + I + D E + + ++++SK +P
Sbjct: 13 PLGRGVETTWRRLIDGECGIRGLTL--DDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSN 70
Query: 529 IDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVG----- 582
EFD + L ++ + + + + AL DA + P + + + G+ +G
Sbjct: 71 PGEFDEALW----LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 126
Query: 583 VEEGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTAC 627
+ + + + VN+ S H ++ +GP A TAC
Sbjct: 127 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSM-------KYGFQGPNHAAVTAC 179
Query: 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 681
++ + A + ++ + D ++ G I + + + LS P F
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPF 239
Query: 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQT 739
D +G V E +VL+ A G I+A + G G++ D + IT P +G
Sbjct: 240 DCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDA--HHITQPPEDGKGAV 297
Query: 740 ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSN 799
+ ++S L P I+Y+ H T T +GD VE A+ VF + A +S K
Sbjct: 298 LAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTL-AFSSTKGA 356
Query: 800 IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 859
GH A+G V I + +I + + P +L+ + + + P S K
Sbjct: 357 TGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPL--TTSKKM------L 408
Query: 860 LRIGAVS-AFGMSGTNAHIVL 879
+R A+S +FG GTNA ++
Sbjct: 409 VRT-AMSNSFGFGGTNASLLF 428
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-34
Identities = 87/433 (20%), Positives = 167/433 (38%), Gaps = 64/433 (14%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P + WK L+ + IS I FD ++ +K+ G + F+
Sbjct: 30 PVGNTVESTWKALLAGQSGISLI--DHFD-----------TSAYATKFAGLVKD---FNC 73
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
IS E +MD ++ + A++D+G + +IG +G E
Sbjct: 74 EDI-ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEEN 132
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
++ + VN+ + H I L+GP ++I TA +S +
Sbjct: 133 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTI-------MYGLRGPSISIATAATSGVHNI 185
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A + + + D ++ G +P +A LS P +D+ +G V
Sbjct: 186 GHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFV 245
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 747
+ +VL+ A G I+A + G G++ D +T+P NG + + +
Sbjct: 246 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDA--YHMTSPPENGAGAALAMANALR 303
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
+ + I Y+ HGT T GD E A+ +F ++S KS GH A+
Sbjct: 304 DAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSMTGHLLGAA 360
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 867
G V I + +++ + +P +++ + + L P +++ + + ++
Sbjct: 361 GAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP---HEARQV-----SGMEYTLCNS 412
Query: 868 FGMSGTNAHIVLQ 880
FG GTN ++ +
Sbjct: 413 FGFGGTNGSLIFK 425
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 138 bits (348), Expect = 4e-33
Identities = 59/424 (13%), Positives = 121/424 (28%), Gaps = 105/424 (24%)
Query: 524 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VG 582
G IP ++ + IS ++DP +L A +G + + + VG
Sbjct: 988 GQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1045
Query: 583 VEEGS----------NYQDRLDQ-------------VNLTSTHNAILSARLAYFMDLKGP 619
GS ++DR +++ N +L + GP
Sbjct: 1046 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL-------ISSSGP 1098
Query: 620 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS- 673
+ AC++S+ + I +++ + I G + + S M S
Sbjct: 1099 IKTPVGACATSVESVDIGVETILSGKARICIVGGY------DDFQEEGSFEFGNMKATSN 1152
Query: 674 ----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY 723
P NG + ++ ++ + AL G PI+ I+ +
Sbjct: 1153 TLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATAT 1212
Query: 724 DGKTNGITAP---NGISQT------------ELIKSVYKKSNLN----------PEDINY 758
D G + P GI T + Y+K L ++
Sbjct: 1213 DK--IGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEA 1270
Query: 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQS 818
+ D E +N+ + + + G+ F +
Sbjct: 1271 LKLEAEEIPSEDQNEFLLERTRE---IHNEAESQLRAAQQQWGNDFYKRD-----PRIAP 1322
Query: 819 IKYKIIPASLHCEKENNYIILKNSPFYINK--SNKKWNTVNEKLRIGAVSAFG-MSGTNA 875
++ + L + + ++ K N NE I + + +
Sbjct: 1323 LRGALATYGLTIDDLG----------VASFHGTSTKANDKNESATINEM--MKHLGRSEG 1370
Query: 876 HIVL 879
+ V+
Sbjct: 1371 NPVI 1374
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 3e-23
Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
Query: 709 GDPI-HAIIRGSGINYDGKTN--------GITAPNGISQTELIKSVYKKSNLNPEDINYI 759
D + R I+ + ++ G + ++ L +D+
Sbjct: 1281 EDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340
Query: 760 ITHGTGTKLGDPVEINALHDVFKNKTYNQ-KFCAITSNKSNIGHTFAASGLVSLINLVQS 818
HGT TK D E ++++ K+ ++ K GH A+G + +Q
Sbjct: 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQI 1400
Query: 819 IKYKIIPASLHCE------KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 872
+ IIP + + + ++ Y++ Y +K+ K + +R ++++FG
Sbjct: 1401 LNSGIIPGNRNADNVDKILEQFEYVL------YPSKTLKT-----DGVRAVSITSFGFGQ 1449
Query: 873 TNAHIVL 879
++
Sbjct: 1450 KGGQAIV 1456
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-33
Identities = 99/442 (22%), Positives = 173/442 (39%), Gaps = 74/442 (16%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGID---E 531
P + W LI + I + ++K +P +
Sbjct: 33 PLGVGTHLVWDRLIGGESGIVSLVG--EEYKSI-----------PCSVAAYVPRGSDEGQ 79
Query: 532 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVG-----VEE 585
F+ F +S + + M + + LA++D+G+ P A+Q G+ +G +E
Sbjct: 80 FNEQNF-VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEV 138
Query: 586 GSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 630
S VN+ + +I LKGP A++TAC++
Sbjct: 139 VSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSI-------RYKLKGPNHAVSTACTTG 191
Query: 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERAN 686
A + + + + D ++ G + ISP + + A LS P C F + +
Sbjct: 192 AHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRD 251
Query: 687 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 744
G V E +VL+ A+ I+A + G G++ D ITAP G + +
Sbjct: 252 GFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDA--GHITAPDPEGEGALRCMAA 309
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
K + + PE+I+YI H T T LGD E A+ +FK+ Y A++S K GH
Sbjct: 310 ALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYA---LAVSSTKGATGHLL 366
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTVNEK 859
A+G V + Y+ +P +L+ + NY+ P K+ + ++
Sbjct: 367 GAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV-----P---LKAQEW--KTEKR 416
Query: 860 LRIGAVS-AFGMSGTNAHIVLQ 880
++ +FG GTNA + +
Sbjct: 417 FI--GLTNSFGFGGTNATLCIA 436
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-32
Identities = 91/434 (20%), Positives = 154/434 (35%), Gaps = 67/434 (15%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P EFW L K I I FD + + I F
Sbjct: 35 PIGNTPEEFWNSLATGKIGIGGI--TKFD-----------HSDFDVHNAAEIQD---FPF 78
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 585
+ + R D + L + A+ A + + G+ V ++
Sbjct: 79 DKY-FVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQ 137
Query: 586 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
++ N+ S + A+ G +INTACSSS A
Sbjct: 138 VLRLHEKGPKRVKPMTLPKALPNMASGNVAM-------RFGANGVCKSINTACSSSNDAI 190
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 690
A +S++ D + G I+P A + LS P FD+ NG V
Sbjct: 191 GDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVM 250
Query: 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 748
E +VL+ L A G I A + G G D +T+P G + IK ++
Sbjct: 251 GEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDA--YHMTSPHPEGQGAIKAIKLALEE 308
Query: 749 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 808
+ ++PE + Y+ HGT T + E A+ V + ++S KS GH A+G
Sbjct: 309 AEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEV------PVSSTKSFTGHLLGAAG 362
Query: 809 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 868
V I ++++++ +P + + ++YI + +K ++ + F
Sbjct: 363 AVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY---GQGLEK------EIPYAISNTF 413
Query: 869 GMSGTNAHIVLQEY 882
G G NA + + +
Sbjct: 414 GFGGHNAVLAFKRW 427
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-32
Identities = 92/443 (20%), Positives = 153/443 (34%), Gaps = 71/443 (16%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
P W+ LI + + + K + G FDP
Sbjct: 36 PLGCGKELVWQRLIGGGSGLRRLGD--DIAGEL---SAKVGGTVQDVAEDPEGG---FDP 87
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGS-----N 588
+ E +MD + + + AL +AG+ P + + V G
Sbjct: 88 ERS-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAE 146
Query: 589 YQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVA 633
+ NL + +I +GP+ TAC++S+ A
Sbjct: 147 AVRIGETRGVRRLSPFTIPFFLSNLAAGQISI-------KHRFRGPLGCPVTACAASVQA 199
Query: 634 THIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANG 687
A + +R E D ++ G + +A LS P FD +G
Sbjct: 200 IGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDG 259
Query: 688 LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSV 745
V E VV++ L AL+ G A I G G D +TA +G +K
Sbjct: 260 FVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADA--YHMTAGPDDGSGAMRAMKLA 317
Query: 746 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 805
+ ++ PE ++Y+ H T T +GD EI AL VF AI+S KS GH
Sbjct: 318 LRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGP----AISSTKSATGHLLG 373
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKEN------NYIILKNSPFYINKSNKKWNTVNEK 859
A+G + + +++ ++P +L+ E + + I +
Sbjct: 374 AAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI-----G---PAARHV------P 419
Query: 860 LRIGAVSAFGMSGTNAHIVLQEY 882
+ I + FG G NA ++ + Y
Sbjct: 420 VEIALSNGFGFGGVNASVLFRRY 442
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 5e-32
Identities = 87/436 (19%), Positives = 156/436 (35%), Gaps = 71/436 (16%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
+ +I WK L+ + I + + + + K G +
Sbjct: 24 SISPDIESTWKGLLAGESGIHALED--EF---------VTKWDLAVKIGGHLKD----PV 68
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 589
+ L+ RM QR E AG ++ + + V G E
Sbjct: 69 DSH-MGRLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVES 125
Query: 590 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
D ++ N + + + + VM +ACSS A
Sbjct: 126 YDLMNAGGPRKVSPLAVQMIMPNGAAAVIGL-------QLGARAGVMTPVSACSSGSEAI 178
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 689
A + + + D A+ GV I A + +S P+ FD+ +G V
Sbjct: 179 AHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFV 238
Query: 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 747
EA ++++ A + G A + G+GI D + AP +G+ + +
Sbjct: 239 FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDA--FHMVAPAADGVRAGRAMTRSLE 296
Query: 748 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 807
+ L+P DI+++ HGT T +GD E NA+ ++ A+ + KS +GH+ A
Sbjct: 297 LAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQA------AVYAPKSALGHSIGAV 350
Query: 808 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVS- 866
G + + V +++ +IP +L+ E + I L + R AV+
Sbjct: 351 GALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA---GEPRYG------DYRY-AVNN 400
Query: 867 AFGMSGTNAHIVLQEY 882
+FG G N + Y
Sbjct: 401 SFGFGGHNVALAFGRY 416
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 8e-32
Identities = 98/439 (22%), Positives = 165/439 (37%), Gaps = 75/439 (17%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
A + WK+L++ + I + + + ++ P++ G + +EFD
Sbjct: 40 ALATDAETTWKLLLDRQSGIRTLDDPFVEE---FDLPVRIG--------GHLL--EEFDH 86
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 589
+++ +E RM QR S E+AG ++ ++ + + EE
Sbjct: 87 ---QLTRIELRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFS 141
Query: 590 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
D + N + + K VM +AC+S A
Sbjct: 142 YDDMRARGMKAVSPLTVQKYMPNGAAAAVGL-------ERHAKAGVMTPVSACASGAEAI 194
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEA---YIAMTSAGMLS-----PDGKCYVFDERAN 686
A Q + E D AI GV I + M +S P G C FD +
Sbjct: 195 ARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIV--MSTNNDDPAGACRPFDRDRD 252
Query: 687 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 744
G V E ++++ A + G I A I G+ I DG + AP NG I
Sbjct: 253 GFVFGEGGALLLIETEEHAKARGANILARIMGASITSDG--FHMVAPDPNGERAGHAITR 310
Query: 745 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
+ + L P DI+++ H TGT++GD E A+++ A+ + KS +GH+
Sbjct: 311 AIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR-----PAVYAPKSALGHSV 365
Query: 805 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 864
A G V I V +++ ++IP +L+ + I L + R A
Sbjct: 366 GAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA---GEPRPG------NYRY-A 415
Query: 865 VS-AFGMSGTNAHIVLQEY 882
++ +FG G N I Y
Sbjct: 416 INNSFGFGGHNVAIAFGRY 434
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-31
Identities = 91/428 (21%), Positives = 157/428 (36%), Gaps = 64/428 (14%)
Query: 479 NINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFE 538
N E L K IS E + + + G + D
Sbjct: 39 NTEEVTASLREAKSGISRAEE--YA-----------ELGFRCQ----VHGAPDIDIESL- 80
Query: 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVG---------VEEGSNY 589
+ A+ DAG +++N++ G+ +G V+
Sbjct: 81 VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADIT 140
Query: 590 QDR-LDQVN---LTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATH-I--ACQSLR 642
+++ +V + ++ SA LA F +KG +I++AC++S H I A + ++
Sbjct: 141 REKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATS---NHCIGNAYEMIQ 197
Query: 643 QHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSEAVVA 696
+ D + G + + + + G +S P +D+ +G V +
Sbjct: 198 YGKQDRMFAGGCEDLDWTLS-VLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGV 256
Query: 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 756
+VL+ L AL+ G I+ I G G DG + AP+G +K I
Sbjct: 257 LVLEDLETALARGAKIYGEIVGYGATSDG--YDMVAPSGEGAIRCMKMALSTV---TSKI 311
Query: 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 816
+YI H T T GD EI A+ +F I + KS GH+ A+G+ I +
Sbjct: 312 DYINPHATSTPAGDAPEIEAIRQIFGAGDVC---PPIAATKSLTGHSLGATGVQEAIYSL 368
Query: 817 QSIKYKIIPASLHCEK--ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 874
++ I S H E+ + P + + +L ++FG GTN
Sbjct: 369 LMMQNNFICESAHIEELDPA----FADMPIVRKRIDNV------QLNTVLSNSFGFGGTN 418
Query: 875 AHIVLQEY 882
A +V Q Y
Sbjct: 419 ATLVFQRY 426
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-31
Identities = 109/447 (24%), Positives = 189/447 (42%), Gaps = 81/447 (18%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDE--- 531
P A + E WK L+ + + E F+ + + + IP D
Sbjct: 22 PLASGVEETWKRLLAGESGARRVTE--FE-----------VDDLACQIACRIPVGDGTNG 68
Query: 532 -FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFV-----GVE 584
F+P + P E ++DP + + + AL+DAG+ P +Q + G+ + G+E
Sbjct: 69 TFNPDLH-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIE 127
Query: 585 EGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629
L +NL S H +I L+GP ++ TAC++
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI-------KHKLRGPNHSVVTACAT 180
Query: 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDE 683
A A + + + D ++ G +S + + LS P +DE
Sbjct: 181 GTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDE 240
Query: 684 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTEL 741
+G V E VVL+ L AL+ G I+A + G G++ D ITAP +G
Sbjct: 241 DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDA--FHITAPTESGEGAQRC 298
Query: 742 IKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIG 801
+ + K++ + P++I+YI HGT T + D +E+ A+ V +++S KS+IG
Sbjct: 299 MVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAK---ISMSSTKSSIG 354
Query: 802 HTFAASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTV 856
H A+G + +I+ I PA+L+ + + + P +K ++
Sbjct: 355 HLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLV-----P---HKPRER---- 402
Query: 857 NEKLRIGAVS-AFGMSGTNAHIVLQEY 882
K+ + A+S +FG GTNA +VL+ Y
Sbjct: 403 --KIDV-ALSNSFGFGGTNASLVLRRY 426
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 1e-29
Identities = 91/437 (20%), Positives = 164/437 (37%), Gaps = 75/437 (17%)
Query: 475 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 534
N E L + I+ E + + S +G++ D
Sbjct: 14 SIGNNQQEVLASLREGRSGITFSQE--LK-----------DSGMRSHVWGNVK----LDT 56
Query: 535 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGSNYQDRL 593
I M + A+ DAG P N ++G+ G GS + ++
Sbjct: 57 TGL-IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSP-RFQV 114
Query: 594 DQVNLTSTHNA---------------ILSARLAYFMDLKGPVMAINTACSSSLVATHIAC 638
+ +SA LA + G +I++AC++S A
Sbjct: 115 FGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAV 174
Query: 639 QSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSE 692
+ ++ + D + G + A + G LS P+ +D +G V +
Sbjct: 175 EQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAG 233
Query: 693 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 752
VV++ L AL+ G I+A I G G DG + AP+G +K +
Sbjct: 234 GGGMVVVEELEHALARGAHIYAEIVGYGATSDG--ADMVAPSGEGAVRCMKMAMHGVD-- 289
Query: 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 812
I+Y+ +HGT T +GD E+ A+ +VF +K+ AI++ K+ GH+ A+G+
Sbjct: 290 -TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSP-----AISATKAMTGHSLGAAGVQEA 343
Query: 813 INLVQSIKYKIIPASLHCEK-----ENNYIILKNSPFYINK--SNKKWNTVNEKLRIGAV 865
I + +++ I S++ E+ I+ + + + SN
Sbjct: 344 IYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSN--------------- 388
Query: 866 SAFGMSGTNAHIVLQEY 882
+FG GTNA +V+++
Sbjct: 389 -SFGFGGTNATLVMRKL 404
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-25
Identities = 52/238 (21%), Positives = 89/238 (37%), Gaps = 30/238 (12%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 123
GT L+TGGTG LG + +L+ + NL+L R + + +L + +
Sbjct: 531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQA 590
Query: 124 VDVSDK---LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEA-NYKNFYSVLSSKIS 179
DV+D+ K+++ I P+ V+H AG+ L + E+ + VL K+
Sbjct: 591 CDVADRETLAKVLASIPDE----HPLTAVVHAAGV--LDDGVSESLTVERLDQVLRPKVD 644
Query: 180 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKN 239
G L ++ + FSS S +LG G +YA N F A+ ++
Sbjct: 645 GARNLLELID---------PDVALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQRQSRG 695
Query: 240 IYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297
+ ++ W W E S + +GL F+
Sbjct: 696 L------PTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGA 747
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-22
Identities = 47/304 (15%), Positives = 89/304 (29%), Gaps = 57/304 (18%)
Query: 532 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VGVEEGS--- 587
+D + + +++DP ++L AL +G + + + VG GS
Sbjct: 1168 WDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVG 1227
Query: 588 -------NYQDRLDQ-------------VNLTSTHNAILSARLAYFMDLKGPVMAINTAC 627
Y+DR + + N +L + GP+ AC
Sbjct: 1228 GTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL-------LSSTGPIKTPVGAC 1280
Query: 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI------AMTSAGMLS-----PDG 676
++++ + + ++ Q + + G + E A ++A P
Sbjct: 1281 ATAVESLDVGYDTIMQGKARVCLVGGFD-DFQEEGSYEFANMGATSNAKEEFARGREPGE 1339
Query: 677 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPN-G 735
NG + S+ V+ AL G PI+ I+ + D G + P G
Sbjct: 1340 MSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDK--IGRSVPAPG 1397
Query: 736 ISQTELIKSVYKKSNLNPEDINY-----------IITHGTGTKLGDPVEINALHDVFKNK 784
+ DI Y I L E+ A+ +
Sbjct: 1398 QGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEE 1457
Query: 785 TYNQ 788
Sbjct: 1458 DGPF 1461
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 4e-16
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 747 KKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ-KFCAITSNKSNIGHTFA 805
L +D+ HGT T D E + + K+ + K GH
Sbjct: 1508 ATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKG 1567
Query: 806 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 865
A+G L +Q + I+P + + + + + + Y ++S K + ++ +V
Sbjct: 1568 AAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKT-----DGIKAFSV 1622
Query: 866 SAFGMSGTNAHIVL 879
++FG A +
Sbjct: 1623 TSFGFGQKGAQAIG 1636
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 7e-18
Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 33/182 (18%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---------- 117
GT L+TG + L + +L+L + +
Sbjct: 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAEL 310
Query: 118 -----KAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAG------ISGLTSNILEAN 166
A + D++D + + + P+ VLH+ ++ ++ L
Sbjct: 311 ADLGATATVVTCDLTDAEAAARLLAGVSDA-HPLSAVLHLPPTVDSEPLAATDADALAR- 368
Query: 167 YKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGN 225
V+++K + + L+ L + V FSS +AI G G YA G
Sbjct: 369 ------VVTAKATAALHLDRLLRE--AAAAGGRPPVLVL-FSSVAAIWGGAGQGAYAAGT 419
Query: 226 RF 227
F
Sbjct: 420 AF 421
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 1e-17
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 729 GITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ 788
G + ++ L +D+ HGT TK D E ++++ K+ ++
Sbjct: 1509 GNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSE 1568
Query: 789 -KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847
K GH A+G + +Q + IIP + + + + + Y +
Sbjct: 1569 GNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPS 1628
Query: 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
K+ K + +R ++++FG ++
Sbjct: 1629 KTLKT-----DGVRAVSITSFGFGQKGGQAIV 1655
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 2e-17
Identities = 48/331 (14%), Positives = 97/331 (29%), Gaps = 69/331 (20%)
Query: 532 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VGVEEGS--- 587
++ + IS ++DP +L A +G + + + VG GS
Sbjct: 1193 WNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMG 1252
Query: 588 -------NYQDRLDQVNLTSTH------NAILSARLAYFMDLKGPVMAINTACSSSLVAT 634
++DR + + N + + + GP+ AC++S+ +
Sbjct: 1253 GVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1312
Query: 635 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS-----------PDGKC 678
I +++ + I G + + S M S P
Sbjct: 1313 DIGVETILSGKARICIVGGY------DDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1366
Query: 679 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP---NG 735
NG + ++ ++ + AL G PI+ I+ + D G + P G
Sbjct: 1367 RPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDK--IGRSVPAPGKG 1424
Query: 736 ISQT------------ELIKSVYKKSNLN----------PEDINYIITHGTGTKLGDPVE 773
I T + Y+K L ++ + D E
Sbjct: 1425 ILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNE 1484
Query: 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTF 804
+N+ + + + G+ F
Sbjct: 1485 FLLERTRE---IHNEAESQLRAAQQQWGNDF 1512
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 3e-16
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 123
G+ L+TGGTG +G + L + + +L+L+ R ++ + +L++ +
Sbjct: 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAA 298
Query: 124 VDVSDKLKMISEINSIINNI---GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG 180
D +D+ + +++ + P+ V H AG++ + + + +++ +K++
Sbjct: 299 CDAADR----EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTA 354
Query: 181 TIALN-YALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 227
A + + L LD FV FSS +A+ G G YA N +
Sbjct: 355 --ARHLHEL------TADLDLDAFVL-FSSGAAVWGSGGQPGYAAANAY 394
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-15
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 123
GT L+TGGTG +G + +L + + +L+L RS ++ + +L+ +
Sbjct: 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285
Query: 124 VDVSDKLKMISEINSIINNIG---PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG 180
DV+D+ + ++ IG P+ V H A + + + +K+ G
Sbjct: 286 CDVTDR----ESVRELLGGIGDDVPLSAVFHAAATLDDGT-VDTLTGERIERASRAKVLG 340
Query: 181 TIALN-YALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 227
A N + L ++ L FV FSS ++ G G YA GN +
Sbjct: 341 --ARNLHEL------TRELDLTAFVL-FSSFASAFGAPGLGGYAPGNAY 380
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQV 124
GT LITGG G +G + L + + L+L+ R + + ++L+ + ++
Sbjct: 260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAAC 319
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+++ + + + + P + V H AGI I + ++F +V +K+ G L
Sbjct: 320 DVAERDALAALVTAY-----PPNAVFHTAGILDDAV-IDTLSPESFETVRGAKVCGAELL 373
Query: 185 NYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 227
+ + LD FV FSS + G+ G YA N
Sbjct: 374 HQLTADI------KGLDAFVL-FSSVTGTWGNAGQGAYAAANAA 410
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 74.9 bits (183), Expect = 1e-13
Identities = 93/630 (14%), Positives = 204/630 (32%), Gaps = 137/630 (21%)
Query: 6 ISIVFAEK-ITNFNIKNWI-----NILFKE-----LQEPKLFSIMYYGNDLIRYQLNIKS 54
I VF + + NF+ K+ + +IL KE + S + + +
Sbjct: 21 ILSVFEDAFVDNFDCKD-VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK---QE 76
Query: 55 IILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLK 113
+++ F ++ Y +L++ T S +++ I ++ +
Sbjct: 77 EMVQKFVEEVLRI--NY--------------KFLMSPIKTEQRQPSMMTRM--YIEQRDR 118
Query: 114 KFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV-LHIAGISGLTSNILEANYKNFYS 172
+N+ ++ + +VS +L+ ++ + + P V + G+ G + + Y
Sbjct: 119 LYNDNQVFAKYNVS-RLQPYLKLRQALLELRPAKNVLID--GVLGSGKTWVALDVCLSYK 175
Query: 173 VLSSKISGTIA-LNYALENT---ILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRF 227
V K+ I LN N+ +L++ + + Y I ++ S D++ +
Sbjct: 176 VQC-KMDFKIFWLNLKNCNSPETVLEMLQK----LLY-----QIDPNWTSRSDHSSNIKL 225
Query: 228 QTVYAK-YLNNKNIYKKYTNKLITIN--WPLWNNSKFKIG--------NNEQTDFYFKSS 276
+ + L K Y N L+ + + F + + TDF ++
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF-LSAA 284
Query: 277 KQKVL---HENDGLKLFE--QLLIQDKIQYLVLSGELEKLNQIINNIAPKVSENKKINNF 331
+ H + L E LL++ L + L P+ E N
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLK------YLDCRPQDL--------PR--EVLTTNPR 328
Query: 332 NIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMP-S 390
+ E+ I++ + N K K + + + + AE+ ++ F L + P S
Sbjct: 329 RLSIIAES-IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM---FDRLSVFPPS 384
Query: 391 IFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISI-LYD-------------- 435
L + IK+ ++ ++ + K +I +
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 436 --NKINENYENVSKKSNFILNKNTDIN-SEELIA----IIGMSGRFPAARNINEFWKILI 488
I ++Y + L I I R F + +
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM------TLFRMVFL 498
Query: 489 N-----NK--------DVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPL 535
+ K + I + K +Y+ I ++ + + I +F P
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLK-FYKPYICDNDPKYERLVNA---ILDFLPK 554
Query: 536 FFEISPLEAERMDPRQRHLLQESWLALEDA 565
E + + ++ D + L+ E E+A
Sbjct: 555 -IEENLICSKYTDLLRIALMAEDEAIFEEA 583
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.6 bits (159), Expect = 6e-11
Identities = 106/736 (14%), Positives = 216/736 (29%), Gaps = 257/736 (34%)
Query: 325 NKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS 384
K I + F + + N C K++ D +S E I+
Sbjct: 18 YKDI----LSVFEDAFVDNFDC-------------KDVQDMPKSILSKEEIDHII----- 55
Query: 385 LDIMPSIFFSYSTLERLITYFIKNHNNTMIKFY----RNKY-----PLKTESKN---ISI 432
+ + S RL + + KF R Y P+KTE + ++
Sbjct: 56 --MSKD---AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR 110
Query: 433 LYDNKINENYE--------NVSKKSNFI-LNKN-TDINSEELIAIIGMSG---------- 472
+Y + + Y NVS+ ++ L + ++ + + I G+ G
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 473 ----RFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG 528
+ + FW + + N + + E + KL Y +I+ W
Sbjct: 171 CLSYKVQCKMDFKIFW-LNLKNCNSPETVLEML--QKLLY--------QIDPNW---TSR 216
Query: 529 IDEFDPLFFEISPLEAERMDPRQRHLLQE-----SWLALEDAGYGPNQIANQK-IGMFVG 582
D + L + R LL+ L L + + N K F
Sbjct: 217 SDHSSNI-----KLRIHSIQAELRRLLKSKPYENCLLVLLN-------VQNAKAWNAF-- 262
Query: 583 VEEGSNYQDRLDQVNLTSTHNA----ILSARLAYFMDLKGPVMAINTACSSSLVA--THI 636
N ++ L +T LSA + L M + SL+
Sbjct: 263 -----NLSCKI----LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 637 ACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696
Q L + +P +++ + + DG +
Sbjct: 314 RPQDLPREVLT----------TNPRR-LSIIAE-SIR-DGLA-----TWDNW-------- 347
Query: 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 756
K + + D + II S +N + E + ++ + ++ P
Sbjct: 348 ---KHV-----NCDKLTTIIESS-LNV------------LEPAEY-RKMFDRLSVFPPSA 385
Query: 757 NYIITHGTGTKL-GDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 815
+ I + + D ++ + + V NK + K +S+ ++
Sbjct: 386 H--IPTILLSLIWFDVIKSDVMVVV--NKLHK-YSLVEKQPKE---------STISIPSI 431
Query: 816 VQSIKYKI-IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 874
+K K+ +LH ++Y I K + + L
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFD--------SDDLIPPYLD------------- 470
Query: 875 AHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIE 934
+Y + + I +H+ + +++L +FL
Sbjct: 471 ------QYF---Y------SHIG---HHLKNIEHPERMTLFRM-----VFL--------- 498
Query: 935 NFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTL--NSKEKILHT-----NYLKGIVSH 987
+F F +E+ KI +D+ N+ IL+T Y I +
Sbjct: 499 DF---------RF----------LEQ--KIRHDSTAWNASGSILNTLQQLKFYKPYICDN 537
Query: 988 KFTSNKIIDSYINKLF 1003
+++++ ++ L
Sbjct: 538 DPKYERLVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 3e-08
Identities = 62/411 (15%), Positives = 118/411 (28%), Gaps = 113/411 (27%)
Query: 17 FNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYI----------- 65
NIK I+ + EL+ L Y N L+ +L + +N+
Sbjct: 221 SNIKLRIHSIQAELRR--LLKSKPYENCLL---------VLLNVQNAKAWNAFNLSCKIL 269
Query: 66 -----KQGGTYLITGGTGRLGM--------------LFSDYLINKYST--NLILSGRSKL 104
KQ +L T + + L YL + +L+ +
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 105 NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILE 164
SII + ++ + DKL I I S +N L
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTI--IESSLNV---------------LEPAEYR 372
Query: 165 ANYKNFYSVL--SSKISGTIALNYALENTILKLQKNKL-----DFVCYFSSSSAILGDFG 217
+ SV S+ I + + + + V S +
Sbjct: 373 KMFDRL-SVFPPSAHIP---------TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKL-ITINWPLWNNSKFKIGNNEQTDFYFKSS 276
++ + + + K N +++ + I + + D YF S
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP------PYLDQYFYSH 476
Query: 277 -----KQKVLHENDGLKLFEQLL-----IQDKIQYLVL-----SGELEKLNQIIN---NI 318
K E LF + ++ KI++ L L Q+ I
Sbjct: 477 IGHHLKNIEHPERM--TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 319 APKVSENKKINNFNIEKFI----ENDIKNHICNI----LNTKKSEIYKNKN 361
+ +++ N I F+ EN I + ++ L + I++ +
Sbjct: 535 CDNDPKYERLVN-AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 6e-10
Identities = 13/68 (19%), Positives = 33/68 (48%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 396
I++ +K + +L ++ D G DS++ ++ R +S+ +S+ + +++
Sbjct: 131 IQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWP 190
Query: 397 TLERLITY 404
TL+ L
Sbjct: 191 TLKSLADE 198
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 6e-09
Identities = 12/69 (17%), Positives = 28/69 (40%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 396
++ + +L + +I + G DS+ A++ R ++K Y L I ++Y
Sbjct: 27 CAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYP 86
Query: 397 TLERLITYF 405
+ +
Sbjct: 87 VFKAFTQWV 95
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A Length = 88 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-09
Identities = 12/73 (16%), Positives = 31/73 (42%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 396
I++ + + L+ +I ++ +Y +S L K+ ++ P + F+Y
Sbjct: 15 IQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYP 74
Query: 397 TLERLITYFIKNH 409
T+ +L + +
Sbjct: 75 TIAQLAKRLGELY 87
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} Length = 89 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 2e-08
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMP--SIFFS 394
+ + + E+ + N AD G DS+S + LD+ P S+F
Sbjct: 12 KLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFID 71
Query: 395 YSTLERLITYFIKNHNN 411
+T+ L + + + +
Sbjct: 72 CTTVRALKDFMLGSGDA 88
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 9e-06
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 32/146 (21%)
Query: 72 LITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130
L+TG +G++G YL KY N+I S + ++ K +I +DVS++
Sbjct: 3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIK----------FITLDVSNR- 51
Query: 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA-LNYALE 189
EI+ + ID + H+AGI E + Y V ++GT L A +
Sbjct: 52 ---DEIDRAVEKYS-IDAIFHLAGILSAKG---EKDPALAYKVN---MNGTYNILEAAKQ 101
Query: 190 NTILKLQKNKLDFVCYFSSSSAILGD 215
+ + K+ S+ + G
Sbjct: 102 HRVEKV---------VIPSTIGVFGP 118
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* Length = 99 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-05
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 341 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 400
+K + L T++SEI +++ D G DSI E++ +++ Y+L++ + + Y TL
Sbjct: 26 LKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLE 85
Query: 401 LITY 404
L Y
Sbjct: 86 LSGY 89
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 29/147 (19%)
Query: 71 YLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK 129
LI G G++G + L Y + N+I S KLN N + V+ D
Sbjct: 5 ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN-------TDVVNSGPFEVVNALDF 57
Query: 130 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI-ALNYAL 188
++I ++ I + +A + T+ KN ++ LN A
Sbjct: 58 ----NQIEHLVEVHK-ITDIYLMAALLSATAE------KNPAFAWDLNMNSLFHVLNLAK 106
Query: 189 ENTILKLQKNKLDFVCYFSSSSAILGD 215
I K+ ++ SS A+ G
Sbjct: 107 AKKIKKI---------FWPSSIAVFGP 124
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 31/163 (19%)
Query: 61 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSKLNSIIYKKLKK 114
+N Y QG I G G +G + L+ S L +
Sbjct: 8 ENLYF-QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV-----FQPEAPAG 61
Query: 115 FNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVL 174
F+ D+S E ++ D + H+A I + E ++ Y +
Sbjct: 62 FSGAVDARAADLSAP----GEAEKLVEA--RPDVIFHLAAIVSGEA---ELDFDKGYRI- 111
Query: 175 SSKISGTIALNYALENTILKLQKNKLDFVC--YFSSSSAILGD 215
+ GT L + +++ K + F+SS A+ G
Sbjct: 112 --NLDGTRYL---FD--AIRIANGKDGYKPRVVFTSSIAVFGA 147
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 9e-04
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 39/151 (25%)
Query: 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK 129
L+TG G+LG + + L L L+ S L+ +Q D++D
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEI-LRLADLSPLDPA--------GPNEECVQCDLADA 55
Query: 130 LKMISEINSIINNIGPIDGVLHIAGISGLTS--NILEANYKNFYSVLSSKISGTIA-LNY 186
+ +N+++ DG++H+ GIS IL+ N I G
Sbjct: 56 ----NAVNAMVAG---CDGIVHLGGISVEKPFEQILQGN-----------IIGLYNLYEA 97
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFG 217
A + + V F+SS+ +G +
Sbjct: 98 ARAHGQPR-------IV--FASSNHTIGYYP 119
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1005 | |||
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 100.0 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 100.0 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.97 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.97 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.97 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.97 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.97 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.97 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.97 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.97 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.97 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.97 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.96 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.96 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.96 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.96 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.96 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.96 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.96 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.96 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.96 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.96 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.95 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.95 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.95 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.95 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.95 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.95 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.94 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.94 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.94 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.94 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.94 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.94 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.94 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.94 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.94 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.94 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.94 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.94 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.94 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.94 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.94 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.94 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.94 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.94 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.94 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.94 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.94 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.94 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.94 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.94 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.94 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.94 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.94 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.93 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.93 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.93 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.93 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.93 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.93 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.93 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.93 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.93 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.93 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.93 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.93 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.93 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.93 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.93 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.93 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.93 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.93 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.93 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.93 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.93 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.93 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.93 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.93 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.93 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.93 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.93 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.93 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.93 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.93 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.93 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.93 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.93 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.93 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.93 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.93 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.93 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.93 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.93 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.92 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.92 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.92 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.92 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.92 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.92 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.92 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.92 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.92 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.92 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.92 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.92 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.92 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.92 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.92 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.92 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.92 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.92 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.92 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.92 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.92 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.92 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.92 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.92 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.92 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.92 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.92 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.92 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.92 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.92 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.92 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.92 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.92 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.92 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.92 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.92 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.92 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.91 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.91 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.91 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.91 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.91 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.91 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.91 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.91 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.91 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.91 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.91 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.91 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.91 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.91 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.91 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.91 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.91 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.91 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.91 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.91 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.91 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.91 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.91 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.91 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.91 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.91 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.91 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.9 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.9 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.9 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.9 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.9 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.9 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.9 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.9 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.9 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.9 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.9 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.9 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.9 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.9 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.9 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.9 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.9 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.9 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.9 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.9 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.9 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.9 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.9 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.9 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.9 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.9 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.9 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.9 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.9 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.9 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.9 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.9 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.9 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.89 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.89 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.89 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.89 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.89 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.89 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.89 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.89 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.89 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.89 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.88 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.88 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.88 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.88 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.88 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.88 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.88 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.88 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.88 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.87 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.87 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.87 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.87 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.87 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.86 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.86 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.86 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.86 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.86 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.86 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.86 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.85 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.85 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.84 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.81 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.81 | |
| 3tzy_A | 491 | Polyketide synthase PKS13; acyltransferase, long f | 99.81 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.81 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.8 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.8 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.79 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.78 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.77 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.77 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.69 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.67 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.63 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.59 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.59 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.56 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.54 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.53 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.51 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 99.51 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.51 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.5 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.5 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.49 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.49 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.49 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.48 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.47 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.47 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.47 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.46 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.46 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.46 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.45 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.45 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.45 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.44 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.44 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.44 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.44 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.43 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.43 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.43 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.43 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.43 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.42 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.42 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.42 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.42 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.42 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.41 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.4 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.4 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.4 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.4 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.4 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.4 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.4 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.38 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.38 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.38 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.37 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.37 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.36 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.36 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.35 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.34 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.34 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.34 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.34 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.33 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.33 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.32 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.31 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 99.31 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.31 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.31 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.31 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.3 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.3 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.29 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.29 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.29 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.28 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.28 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.27 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 99.27 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.27 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.26 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.25 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.24 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.24 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 99.23 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.23 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 99.23 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 99.23 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.22 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.22 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.21 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.2 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.18 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 99.17 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.15 | |
| 2cg5_B | 91 | Fatty acid synthase; transferase-hydrolase complex | 99.13 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.13 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 99.11 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.1 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 99.1 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 99.1 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.1 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.09 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.08 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 99.07 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.07 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 99.07 | |
| 2cnr_A | 82 | FAS, ACP, acyl carrier protein; polykdetide, phosp | 99.06 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.06 | |
| 2kjs_A | 87 | Putative acyl carrier protein; alpha, ACP, PNS, st | 99.06 | |
| 2qnw_A | 82 | Acyl carrier protein; malaria, SGC, structural gen | 99.04 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.04 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 99.03 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 99.03 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.03 | |
| 2kwl_A | 84 | ACP, acyl carrier protein; structural genomics, se | 99.01 | |
| 1f80_D | 81 | Acyl carrier protein; transferase; HET: PN2; 2.30A | 99.01 | |
| 3gzm_A | 81 | Acyl carrier protein; helix bundle, phosphopanteth | 99.0 | |
| 1vku_A | 100 | Acyl carrier protein; TM0175, structural genomics, | 99.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 98.99 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 98.98 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.98 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 98.98 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 98.97 | |
| 1af8_A | 86 | Actinorhodin polyketide synthase acyl carrier Pro; | 98.96 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 98.96 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.94 | |
| 1nq4_A | 95 | Oxytetracycline polyketide synthase acyl carrier p | 98.92 | |
| 1klp_A | 115 | ACP, ACPM, meromycolate extension acyl carrier pro | 98.9 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 98.89 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.89 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 98.89 | |
| 2l3v_A | 79 | ACP, acyl carrier protein; structural genomi seatt | 98.89 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 98.87 | |
| 3ejb_A | 97 | Acyl carrier protein; protein-protein complex, cyt | 98.87 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.84 | |
| 2l4b_A | 88 | Acyl carrier protein; infectious disease, human gr | 98.84 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.83 | |
| 2kw2_A | 101 | Specialized acyl carrier protein; structural genom | 98.83 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.82 | |
| 2lte_A | 103 | Specialized acyl carrier protein; APO protein, tra | 98.31 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.81 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.8 | |
| 4dxe_H | 101 | ACP, acyl carrier protein; acyl-carrier-protein sy | 98.8 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 98.77 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 98.76 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.75 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 98.73 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 98.73 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 98.71 | |
| 2jq4_A | 105 | AGR_C_4658P, hypothetical protein ATU2571; ATC2521 | 98.66 | |
| 2amw_A | 83 | Hypothetical protein NE2163; all helical protein, | 98.65 | |
| 1dv5_A | 80 | APO-DCP, APO-D-alanyl carrier protein; 3-helix bun | 98.63 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.63 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.62 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 98.61 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.61 | |
| 3ce7_A | 107 | Specific mitochodrial acyl carrier protein; malari | 98.43 | |
| 2lki_A | 105 | Putative uncharacterized protein; helical bundle, | 98.42 | |
| 2kci_A | 87 | Putative acyl carrier protein; alpha, ACP, PCP, st | 98.37 | |
| 1fh1_A | 92 | NODF, nodulation protein F; ROOT nodulation factor | 98.37 | |
| 2l9f_A | 102 | CALE8, meacp; transferase, acyl carrier protein; N | 98.36 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 98.3 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.28 | |
| 2cgq_A | 113 | Acyl carrier protein ACPA; RV0033, protein transpo | 98.25 | |
| 2fq1_A | 287 | Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy | 98.22 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.19 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 98.18 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.12 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 98.11 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.02 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 98.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 97.99 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 97.95 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.72 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.59 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.55 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.54 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.46 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.15 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.99 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.97 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 96.92 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.89 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.88 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.88 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 96.87 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.81 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.76 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.7 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.57 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.53 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.45 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.42 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.32 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.15 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.14 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 96.08 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.07 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.06 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 96.06 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.03 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.01 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 95.96 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.85 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.72 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 95.65 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 95.45 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 95.4 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 95.39 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 95.37 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.3 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.25 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 95.22 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 95.17 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 95.08 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 95.04 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.0 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 94.92 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 94.82 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 94.78 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 94.71 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 94.69 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 94.6 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 94.46 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 94.2 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 94.08 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 93.83 |
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-107 Score=1022.71 Aligned_cols=537 Identities=31% Similarity=0.497 Sum_probs=490.3
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCccc-ccccccccCCcCCCCCccceeeeccCCCCCCCCccCCC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKI-FDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 539 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 539 (1005)
+++||||||+||||++ .++++||++|.+|+++++++|++| |+...+|++++...++.+++++||+++++.||+.||||
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 5789999999999997 999999999999999999999999 99999999888888999999999999999999999999
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-----cccccccccccchhHHHHHHHHHh
Q psy612 540 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-----DRLDQVNLTSTHNAILSARLAYFM 614 (1005)
Q Consensus 540 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-----~~~~~~~~~~~~~~~~a~ris~~~ 614 (1005)
+|+|++.||||||++|+++|+|||||||+++++++.+||||+|++..+|.. ..++++.++++..+++++||||.|
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~l 164 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTM 164 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988776642 223445567778889999999999
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCcc
Q psy612 615 DLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694 (1005)
Q Consensus 615 ~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa 694 (1005)
||+||+++|+|+||||++|||+||++|++|+||+|||||++.+++|..+..|..++++|++|+|+|||.++|||++|||+
T Consensus 165 gl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGa 244 (915)
T 2qo3_A 165 GLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGV 244 (915)
T ss_dssp TBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEE
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHH
Q psy612 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEI 774 (1005)
Q Consensus 695 ~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~ 774 (1005)
|+||||++++|+++|++|||+|+|+++|+||++.+++.|++.+|.++|++||++||++|+||+|||+|||||++||++|.
T Consensus 245 gavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~ 324 (915)
T 2qo3_A 245 TLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEA 324 (915)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHH
T ss_pred EEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccc
Q psy612 775 NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN 854 (1005)
Q Consensus 775 ~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~ 854 (1005)
.+|.++|+.......+|+|||+|+||||+++|||++++||++++|+|++|||++||++|||.|++++++|+++++.++|+
T Consensus 325 ~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~ 404 (915)
T 2qo3_A 325 NALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWR 404 (915)
T ss_dssp HHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECC
T ss_pred HHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccc
Confidence 99999998765556789999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCHH
Q psy612 855 TVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIE 934 (1005)
Q Consensus 855 ~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l~ 934 (1005)
.. ..+|+++||||||||+|+|+|||+++...... ......+..+|+|||+|+++|++++++|.+||+ +++..|.
T Consensus 405 ~~-~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~----~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~-~~~~~l~ 478 (915)
T 2qo3_A 405 RG-ERTRRAAVSAFGISGTNAHVIVEEAPEREHRE----TTAHDGRPVPLVVSARSTAALRAQAAQIAELLE-RPDADLA 478 (915)
T ss_dssp SS-SSCCEEEEEEECTTSEEEEEEEEECCC------------CCSSCEEEEEEESSHHHHHHHHHHHHHHTT-SSSCCHH
T ss_pred cC-CCCcEEEEeeecCCCceEEEEEeecccccccc----ccccCCcccceeEecCCHHHHHHHHHHHHHHhc-CCccchh
Confidence 53 45789999999999999999999987532111 011122457899999999999999999999998 7778899
Q ss_pred HHHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhcccccc--ccCc--cccc-cccccccCccchHHHHHhhhc
Q psy612 935 NFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKI--LHTN--YLKG-IVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 935 ~~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~--~~~~--~~~~-~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
|+||||+++|.||+||.+++++|.+||+++|+.+..+.... ...+ ...+ ++.|+|+|||+||.||||.||
T Consensus 479 d~~~tl~~~r~~~~~r~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vafvF~GQGsQ~~gMg~~L~ 553 (915)
T 2qo3_A 479 GVGLGLATTRARHEHRAAVVASTREEAVRGLREIAAGAATADAVVEGVTEVDGRNVVFLFPGQGSQWAGMGAELL 553 (915)
T ss_dssp HHHHHHHHSSCCCSEEEEEEESSHHHHHHHHHHHHHTCCCCTTEEEEECSCSCCCEEEEECCTTCCCTTTTHHHH
T ss_pred HHHHHHhhcccccCceEEEEECCHHHHHHHHHHHhcCCCCccceeeccccCCCCceeeecCCCcccccchhHHHH
Confidence 99999999999999999999999999999999987763221 0001 1124 899999999999999999997
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-106 Score=1012.63 Aligned_cols=524 Identities=31% Similarity=0.508 Sum_probs=471.6
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCccc-ccccccccCCcCCCCCccceeeeccCCCCCCCCccCCC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKI-FDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 539 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 539 (1005)
.++|||||||||||++ .++++||++|.+|+++++++|.+| |+. + ...+++||+++++.||+.||+|
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~------~------~~~~~~~~l~~~~~fD~~~f~i 105 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP------D------PDARLGGMLAAAGDFDAGFFGI 105 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC------C------SSCCEEBCCTTTTEECTGGGTC
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC------C------CCcceeeEecCccccChhhcCC
Confidence 4679999999999975 889999999999999999999998 631 1 1268899999999999999999
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc------cccccccccccchhHHHHHHHHH
Q psy612 540 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------DRLDQVNLTSTHNAILSARLAYF 613 (1005)
Q Consensus 540 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~a~ris~~ 613 (1005)
+|+|++.||||||++|+++|+|||||||+++++++.+||||+|++..+|.. ....++..+++..+++++||||.
T Consensus 106 ~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 185 (917)
T 2hg4_A 106 SPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYC 185 (917)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHh
Confidence 999999999999999999999999999999999999999999998776643 12344556677788999999999
Q ss_pred hCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCc
Q psy612 614 MDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 693 (1005)
Q Consensus 614 ~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEG 693 (1005)
|||+||+++|+|+||||++|||+||++|++|+||+|||||++.+++|..+..|...+++|++|+|+|||.++|||++|||
T Consensus 186 lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEG 265 (917)
T 2hg4_A 186 LGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEG 265 (917)
T ss_dssp HTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCE
T ss_pred cCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
+|+||||++++|+++|++|||+|+|+++|+||++.++++|+..+|.++|++||++||++|+||+|||+|||||++||++|
T Consensus 266 agavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E 345 (917)
T 2hg4_A 266 AGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIE 345 (917)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHH
T ss_pred EEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccc
Q psy612 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w 853 (1005)
+++|.++|+.......+|+|||+|+||||+++|||++++||++++|+|++|||++||++|||.|+++.++|+++++.++|
T Consensus 346 ~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w 425 (917)
T 2hg4_A 346 VHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSW 425 (917)
T ss_dssp HHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEEC
T ss_pred HHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccC
Confidence 99999999875545678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCH
Q psy612 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCI 933 (1005)
Q Consensus 854 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l 933 (1005)
+.. ..+|+++||||||||+|+|+|||+++..... .. .....+++|+|||+|+++|+.++++|.+||+.++...|
T Consensus 426 ~~~-~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~--~~---~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~~~~~~~l 499 (917)
T 2hg4_A 426 PAG-ERPRRAGVSSFGISGTNAHVIVEEAPEADEP--EP---APDSGPVPLVLSGRDEQAMRAQAGRLADHLAREPRNSL 499 (917)
T ss_dssp CCC-SSCCEEEEEEECTTSEEEEEEEEECCCCC-------------CCEEEEEEESSHHHHHHHHHHHHHHHHHCTTSCH
T ss_pred CCC-CCCCEEEEeeecCCCceEEEEeccCCcccCC--CC---ccccCcceeeeccCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 853 4578999999999999999999998753211 10 11223579999999999999999999999999888899
Q ss_pred HHHHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhcccccc-ccC--ccccccccccccCccchHHHHHhhhc
Q psy612 934 ENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKI-LHT--NYLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 934 ~~~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~-~~~--~~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
.|+||||+++|.||+||.++++++. ||+++|+.+..+.... ... ....+++.|+|+|||+||+||||.||
T Consensus 500 ~d~~~tl~~~r~~~~~r~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~vafvF~GQGsQ~~gMg~~L~ 572 (917)
T 2hg4_A 500 RDTGFTLATRRSAWEHRAVVVGDRD-EALAGLRAVADGRIADRTATGQARTRRGVAMVFPGQGAQWQGMARDLL 572 (917)
T ss_dssp HHHHHHHHHSSCCCSEEEEEEESHH-HHHHHHHHHHHTCCCTTEEEEECCCCCCEEEEECCTTSCCSSTTHHHH
T ss_pred HHHHHHHHhchhcccceEEEEeCCH-HHHHHHHHHhcccccccccccccccccceeEEeCCCccccccchHHHH
Confidence 9999999999999999999999999 9999999887663211 000 11245899999999999999999998
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-101 Score=967.17 Aligned_cols=502 Identities=28% Similarity=0.467 Sum_probs=442.1
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|||||||||||++.++++||++|.+|+++++++| .||+...|.. ....|++++++.||+.||||+|
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~-~~~~~~~~~~----------~~~~g~~~~~~~FD~~~f~i~~ 71 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYGL----------PRRSGKLKDLSRFDASFFGVHP 71 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSS-SSSCTTGGGC----------CSCEECCSCSSCCCTTTTTCCH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCC-cccccccccC----------cccccccCChhhcChhhcCCCH
Confidence 4789999999999999999999999999999999975 6887643321 1346889999999999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc------ccccccccccchhHHHHHHHHHhC
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMD 615 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~ 615 (1005)
+|++.||||||++|+++|||||||||+++++++.++|||+|+..++|... .+.++..+++..+++++||||.||
T Consensus 72 ~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 151 (965)
T 3hhd_A 72 KQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFD 151 (965)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHT
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999887765322 234455677788999999999999
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccE
Q psy612 616 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 695 (1005)
Q Consensus 616 l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~ 695 (1005)
|+||+++||||||||++|||+||++|++|+||+|||||+|++++|..+..|++.+++|++|+|+|||.++|||++|||+|
T Consensus 152 l~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGag 231 (965)
T 3hhd_A 152 FRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVV 231 (965)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEE
T ss_pred CCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKT-NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEI 774 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~-~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~ 774 (1005)
+||||++++|. +|||+|+|+++|+||.+ .++++|++.+|+++|++||++||++|+||+|||+|||||++||++|+
T Consensus 232 avvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~ 307 (965)
T 3hhd_A 232 AVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQEL 307 (965)
T ss_dssp EEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHH
T ss_pred EEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHH
Confidence 99999999996 59999999999999965 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cCCCCeeeccccccc
Q psy612 775 NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKW 853 (1005)
Q Consensus 775 ~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~~~~~~v~~~~~~w 853 (1005)
+||.++|+... ..+|+|||+|+||||+++|||++++||++|+|+|++|||++||++|||.|+ +.+.+++++++..+|
T Consensus 308 ~Al~~~f~~~~--~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~ 385 (965)
T 3hhd_A 308 NGITRALCATR--QEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV 385 (965)
T ss_dssp HHHHHHHCSSC--SSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEEC
T ss_pred HHHHHHhcccC--CCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccC
Confidence 99999998643 457999999999999999999999999999999999999999999999998 788899999999999
Q ss_pred cccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCC-C
Q psy612 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV-C 932 (1005)
Q Consensus 854 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~-~ 932 (1005)
+. ++++||||||||+|+|+|||+++..... .......+++|++||+|+++|+++++++.++++..+.. .
T Consensus 386 ~~-----~~a~v~sfG~gG~Nah~il~~~~~~~~~-----~~~~~~~~~~~~~Sa~~~~~l~~~~~~~~~~~~~~~~~~~ 455 (965)
T 3hhd_A 386 RG-----GNVGINSFGFGGSNVHIILRPNTQPPPA-----PAPHATLPRLLRASGRTPEAVQKLLEQGLRHSQDLAFLSM 455 (965)
T ss_dssp CS-----CEEEEEEECTTSEEEEEEEEECCCCCCC-----CCGGGGSCEEEEEEESSHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred CC-----CeEEEecccCCCceEEEEeccCCccccc-----ccccccccceeecccCCHHHHHHHHHHHHhhhcccchhhH
Confidence 74 4689999999999999999998754211 11112345899999999999999999998887532211 2
Q ss_pred HHHHHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhccccccccCccccccccccccCccchHHHHHhhhc
Q psy612 933 IENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 933 l~~~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
+.|++|| +|.+++||.++++.+.+++. . +.. .....+++.|+|+|||+||.||||.||
T Consensus 456 ~~~~~~~---~~~~~~~r~~~~~~~~~~~~----~-~~~------~~~~~~~v~fvF~GQGsQ~~gMg~~L~ 513 (965)
T 3hhd_A 456 LNDIAAV---PATAMPFRGYAVLGGERGGP----E-VQQ------VPAGERPLWFICSGMGTQWRGMGLSLM 513 (965)
T ss_dssp HHHHCCC---CTTTCCEEEEEEESSSSCCC----E-EEE------CCCSCCCEEEEECCSSCCCTTTTTTGG
T ss_pred HHHHHhh---hcccCcceEEEEecccchhh----h-hhc------ccCCCCCEEEEECCCCcchhhHHHHHH
Confidence 5666664 68899999998887765421 1 111 111245799999999999999999998
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-100 Score=1041.05 Aligned_cols=501 Identities=29% Similarity=0.475 Sum_probs=441.0
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||||||++.++++||++|.+|+++++++ ++||+...+ + ..+++|++++++.||+.||||+|+
T Consensus 2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~-~~~~~~~~~-~---------~~~~~g~~~~~~~fd~~~f~i~~~ 70 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTAD-DRRWKAGLY-G---------LPRRMGKLKDLSRFDASFFGVHSK 70 (2512)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEEC-SSSSCTTGG-G---------CCSEEECCSCSSCCCTTTTTCCHH
T ss_pred CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCC-Ccccccccc-c---------CcccceecCCcccCCHhhcCCCHH
Confidence 57999999999999999999999999999999995 478876532 1 124679999999999999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc------ccccccccccchhHHHHHHHHHhCC
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDL 616 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l 616 (1005)
|++.||||||++||++|||||||||++..+++++||||+|++.++|... ...++.++++..+++++||||+|||
T Consensus 71 ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l 150 (2512)
T 2vz8_A 71 QANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF 150 (2512)
T ss_dssp HHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999988776421 2345677888999999999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEE
Q psy612 617 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696 (1005)
Q Consensus 617 ~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~ 696 (1005)
+||+++|||||||||+|||+||++|++|+||+|||||+|++++|..+..|+++|+|||+|+|||||+++|||++|||+|+
T Consensus 151 ~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~ 230 (2512)
T 2vz8_A 151 KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVA 230 (2512)
T ss_dssp CSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEE
T ss_pred CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGK-TNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG~-~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
||||++++|+ +|||+|+|+++|+||+ +.++|+||+.+|+++|++||++||++|+||+|||+|||||++|||+|++
T Consensus 231 ~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~ 306 (2512)
T 2vz8_A 231 VLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELN 306 (2512)
T ss_dssp EEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHH
T ss_pred EEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHH
Confidence 9999999996 6999999999999996 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cCCCCeeecccccccc
Q psy612 776 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWN 854 (1005)
Q Consensus 776 al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~~~~~~v~~~~~~w~ 854 (1005)
||.++|+... .++|+|||+|+||||+++|||++++||++|+|+||+|||++||++|||.|+ |++.+++++++.++|+
T Consensus 307 al~~~f~~~~--~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (2512)
T 2vz8_A 307 GIVNALCATR--REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIR 384 (2512)
T ss_dssp HHHHHHCSCS--SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCC
T ss_pred HHHHHhcccC--CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCC
Confidence 9999998543 357999999999999999999999999999999999999999999999997 9999999999999996
Q ss_pred ccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCCCCC-H
Q psy612 855 TVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVC-I 933 (1005)
Q Consensus 855 ~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~-l 933 (1005)
. ++++||||||||+|+|+|||+++...... . .....+++|++||+|+++|+++++++.+++....... +
T Consensus 385 ~-----~~a~vnsfG~gG~Nah~il~~~~~~~~~~---~--~~~~~~~~~~~sa~~~~~l~~~~~~~~~~~~~~~~~~~~ 454 (2512)
T 2vz8_A 385 G-----GNVGINSFGFGGSNVHVILQPNSRPAPPP---A--QHAALPRLLQASGRTLEAVQTLLEQGLRHSRDLAFVGML 454 (2512)
T ss_dssp S-----CCEEEEEEETTTEEEEEEEEECCCCCCCC---S--STTTCCEEEEEEESSHHHHHHHHHHHHTTTTCHHHHHHH
T ss_pred C-----CeEEEeccCCCCceeEEEEccCCcccccc---c--cccccceeeeecCCCHHHHHHHHHHHHhhhcccchhhHH
Confidence 3 46899999999999999999986532111 1 1223458999999999999999999877754211101 3
Q ss_pred HHHHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhccccccccCccccccccccccCccchHHHHHhhhc
Q psy612 934 ENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 934 ~~~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
.+++| ++|.+++||.++++.+.+++ +. +.. .....+++.|+|+|||+||.||||.||
T Consensus 455 ~~~~~---~~~~~~~~r~~~~~~~~~~~----~~-~~~------~~~~~~~v~fvF~GQGsQ~~gMg~~L~ 511 (2512)
T 2vz8_A 455 NEIAA---VSPVAMPFRGYAVLGGEAGS----QE-VQQ------VPGSKRPVWFICSGMGAQWQGMGLSLM 511 (2512)
T ss_dssp HHHHC---CCTTTCCEEEEEEESSTTCC----EE-EEE------CCCSCCCEEEEECCSSCCCTTTTSSTT
T ss_pred HHHHh---cccccCceeeeeeccCcchh----hh-hhc------ccCCCCceEEEeCCCCCchHhHHHHHH
Confidence 44444 47899999998777765433 11 111 111245799999999999999999998
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-97 Score=954.21 Aligned_cols=779 Identities=14% Similarity=0.159 Sum_probs=578.7
Q ss_pred CCCEEEEECChhH-HHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHH----HhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKL----KKFNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gG-IG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l----~~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
.+|++|||||++| ||+++|++|+++|++++++.+|+. ...+..+++ ...|.++.++.||++|.++++++++++.
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~ 730 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY 730 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 5799999999999 999999999999997666656654 333334444 2347789999999999999999999999
Q ss_pred hh---cC-CccEEEEcCcccCccc-hhccCC--HHHHHHHHhhhhhHHHHHHHH--HHHHHHHHhcCCCcEEEEecCccc
Q psy612 141 NN---IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYA--LENTILKLQKNKLDFVCYFSSSSA 211 (1005)
Q Consensus 141 ~~---~g-~idgvIh~AG~~~~~~-~~~~~t--~~~~~~~l~~kv~g~~~L~~~--~~~~l~~~~~~~~~~iV~~SSia~ 211 (1005)
++ +| +||+||||||+.. .. ++.+++ .++|++++++|+.|+++++++ +++. +...+.++||++||+++
T Consensus 731 ~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~---M~~~~~G~IVnISS~ag 806 (1878)
T 2uv9_A 731 DTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERG---YETRPAQVILPLSPNHG 806 (1878)
T ss_dssp CSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCSCCEEECCEECSCSS
T ss_pred HhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHhCCCCEEEEEcchhh
Confidence 98 99 9999999999987 66 888999 899999999999999999987 4555 34445689999999999
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHH
Q psy612 212 ILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 212 ~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~ 291 (1005)
..| +++.|+++|+++++|++.+..+.+... +++.+|.||.+.+++|.... ......+...+++.+++++++..+.
T Consensus 807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~--IrVNaVaPG~V~gT~m~~~~-~~~~~~~~~~plr~~sPeEVA~avl 881 (1878)
T 2uv9_A 807 TFG--NDGLYSESKLALETLFNRWYSESWGNY--LTICGAVIGWTRGTGLMSAN-NLVAEGVEKLGVRTFSQQEMAFNLL 881 (1878)
T ss_dssp SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT--EEEEEEEECCBCCTTSCSHH-HHTHHHHHTTTCCCBCHHHHHHHHH
T ss_pred ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC--eEEEEEEecceecCcccccc-hhhHHHHHhcCCCCCCHHHHHHHHH
Confidence 988 588999999999999987766533222 79999999977647775431 1122334556667789999999988
Q ss_pred HHHhccc-----hhhhhhc--hhh------HHHHHHHh----hc---C----------------------C-Cc--cccc
Q psy612 292 QLLIQDK-----IQYLVLS--GEL------EKLNQIIN----NI---A----------------------P-KV--SENK 326 (1005)
Q Consensus 292 ~~l~~~~-----~~~~v~~--~~~------~~~~~~~~----~~---~----------------------~-~~--~~~~ 326 (1005)
.++.... .+.++++ +.+ ..+...+. .. . + .. ....
T Consensus 882 fLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr~~l~~~~~~~~al~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1878)
T 2uv9_A 882 GLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLRKEIMETSAIRQAVIKETAIENKVVNGEDHEALYRRVITEPRA 961 (1878)
T ss_dssp HHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCC
T ss_pred HHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHHHhccccchhhhhhcccccchhcccccccccccccccccchhh
Confidence 7764332 1233222 221 11110000 00 0 0 00 0000
Q ss_pred ccc--ccchhHHHHHHHHHHHHHHhCC-CCcccccCCchhhcC---------------------CchH------------
Q psy612 327 KIN--NFNIEKFIENDIKNHICNILNT-KKSEIYKNKNLADYG---------------------FDSI------------ 370 (1005)
Q Consensus 327 ~~~--~~~~~~~~~~~l~~~ia~~L~~-~~~~i~~~~~l~elG---------------------~DSL------------ 370 (1005)
... .....+. ...++....++.++ +.+++.....|.++| +++|
T Consensus 962 ~l~~~~p~l~~~-~~~~~~l~~~l~~~~dl~~~~vv~g~~e~g~~g~~rtr~~~e~~g~~s~~g~~ela~~mgli~~~~~ 1040 (1878)
T 2uv9_A 962 NLKYPFPELPDW-DKDIKPLNDQLRGMVNLDKVVVVTGLAEIGPWGNARTRWEMEAYGKFSLEGCVEMAWMMGLIKNHNG 1040 (1878)
T ss_dssp CCCCCCCCCCCC-CCCCHHHHHHHTTCSCTTSCEEECCCEEEETTEEHHHHHHHHHTSSCCHHHHHHHHHHTTSEEEEEE
T ss_pred hhcccCCCcchh-hhhhhhHHHHHhhhhhhhhcceeeccCccCcccccchhhHhhhhhhhhHhhHHHHHHHhchhhhccc
Confidence 000 0000000 00011111122222 223333333343333 2222
Q ss_pred -----------------------HHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhhhhhhhhcccCCCcccc
Q psy612 371 -----------------------SLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTES 427 (1005)
Q Consensus 371 -----------------------~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~~~~~~~~~~~~~~~~~ 427 (1005)
+..++++.|..+.|+.++.+.+|++||...+ .++ .+.. +. ..
T Consensus 1041 ~~~~~~~~gw~d~~~~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~~-~~~----~~~~---~~-~~------ 1105 (1878)
T 2uv9_A 1041 PLKGKPYSGWVDAKTGEPVDDKDVKAKYEKYILEHSGIRLIEPELFGGYDPNRK-QLL----QEVV---IE-QD------ 1105 (1878)
T ss_dssp ESSSSEEEEEEESSSCCBCCHHHHHHHHHHHHHHTSEEEECCGGGGTTCCGGGE-EEE----EEEE---CC-SC------
T ss_pred cccccccccccccccCCccchhhhHHHHHHHHHHhcCCCCCcccccCCCCHHHH-HHH----HHhh---cc-cC------
Confidence 2336677788888888888888888887654 111 0000 00 00
Q ss_pred cccccccccccccccccccccccccccCCCCCCCcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCccccccccc
Q psy612 428 KNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLY 507 (1005)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~ 507 (1005)
.++..... .. ...+. ....++|+|+. ..++++||++|.+|++++.+.+
T Consensus 1106 --~~~~~~~~------~~--a~~~~------~~~~~~~~i~~-------~~~~~~~w~~L~~G~~~i~p~~--------- 1153 (1878)
T 2uv9_A 1106 --LEPFEASK------EQ--AEEFK------REHGDKVEIFE-------IPETGQYTVRLRKGATLLIPKA--------- 1153 (1878)
T ss_dssp --CCCEEECH------HH--HHHHH------HHHGGGEEEEE-------CTTTSCEEEEECTTCEEEEEEE---------
T ss_pred --CCccccCh------hh--hhhcc------ccCCCCeeEee-------CCChHHHHHHHHcCCCeeeecC---------
Confidence 00000000 00 00000 01236788863 3567899999999999998732
Q ss_pred ccCCcCCCCCccceeeeccCCCCCCCCccCCCChhhhccCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceEEEEe
Q psy612 508 YENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIGMFVG 582 (1005)
Q Consensus 508 ~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----~~~~~~Gv~~g 582 (1005)
.+.+.+++|+++ +.||+.||||++++++.||||+|++|+++||||+||||+ +.+ +.+.++|||+|
T Consensus 1154 --------~~~~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vG 1223 (1878)
T 2uv9_A 1154 --------LQFDRLVAGQIP--TGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIG 1223 (1878)
T ss_dssp --------ECCSCCEEEECC--TTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEE
T ss_pred --------CCCcceEEEEeC--CCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEc
Confidence 123457899997 369999999999999999999999999999999999998 666 78899999999
Q ss_pred eccCCcc------c-----cccccccccccchhHHHHHHHH-HhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEE
Q psy612 583 VEEGSNY------Q-----DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAI 650 (1005)
Q Consensus 583 ~~~~~~~------~-----~~~~~~~~~~~~~~~~a~ris~-~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~al 650 (1005)
+..+++. . ....+..++++..+++++||++ +|+++||+++|++|||||++|||+||++|++|+||+||
T Consensus 1224 sg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~adval 1303 (1878)
T 2uv9_A 1224 SGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCL 1303 (1878)
T ss_dssp ESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEE
T ss_pred cCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEE
Confidence 9877621 1 1133455667788999999999 59999999999999999999999999999999999999
Q ss_pred EeecccCCCHHHHHHHHHcCCCC-----------CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEe
Q psy612 651 SAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGS 719 (1005)
Q Consensus 651 vggv~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~ 719 (1005)
|||++. +++..+..|..++++| |++.|||||.++|||++|||+|++||+++++|+++|++|||+|+|+
T Consensus 1304 vGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~ 1382 (1878)
T 2uv9_A 1304 VGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMT 1382 (1878)
T ss_dssp EEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEE
T ss_pred Eeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEE
Confidence 999998 7899999999999999 7899999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCCC----------------H------------------------------------------------
Q psy612 720 GINYDGKTNGITAPN----------------G------------------------------------------------ 735 (1005)
Q Consensus 720 ~~~~dG~~~~~~~p~----------------~------------------------------------------------ 735 (1005)
++|+||.+.++++|. +
T Consensus 1383 a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 1462 (1878)
T 2uv9_A 1383 STATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFD 1462 (1878)
T ss_dssp EEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCC
T ss_pred EEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccc
Confidence 999999988877772 1
Q ss_pred ---HHHH-------------------------------HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy612 736 ---ISQT-------------------------------ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 781 (1005)
Q Consensus 736 ---~~q~-------------------------------~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~ 781 (1005)
.+|+ ++|++||+++|++|+||+|||+|||||++||++|.++|.++|
T Consensus 1463 ~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f 1542 (1878)
T 2uv9_A 1463 ETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQL 1542 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHH
Confidence 2454 899999999999999999999999999999999999999999
Q ss_pred cc-CCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cCCCCeeeccccccccccccC
Q psy612 782 KN-KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWNTVNEK 859 (1005)
Q Consensus 782 ~~-~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~~~~~~v~~~~~~w~~~~~~ 859 (1005)
+. .+...++|+|+|+|+|+||+++|||+++++|++++|+||+|||++|+++|||.++ ++. +.++.+..+|. .
T Consensus 1543 ~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~--v~~~~~~~~~~----~ 1616 (1878)
T 2uv9_A 1543 KHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDY--IVYPSRSIKTD----G 1616 (1878)
T ss_dssp HHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTT--EECCSSCEECS----C
T ss_pred hhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccc--cccccccccCC----C
Confidence 86 3444567999999999999999999999999999999999999999999999994 442 44566665552 4
Q ss_pred ccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhC
Q psy612 860 LRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN 928 (1005)
Q Consensus 860 ~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~ 928 (1005)
+|+++||||||||+|+|+||++++..... .. ...+-..++|.+..+++..+.+.+.+..+
T Consensus 1617 ~r~a~v~SFGFGG~NahvIle~p~~~~~~-l~--------~~~~~~y~~r~~~r~~~~~~~~~~~~~~~ 1676 (1878)
T 2uv9_A 1617 IKAFSVTSFGFGQKGAQAIGVHPKYLFAT-LD--------KAQYEAYCVKVQARQKKAYRFFHNGLINN 1676 (1878)
T ss_dssp CCEEEEEEEETTTEEEEEEEECTHHHHTT-SC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEccCCCCCeeEEEEEecCCcchhh-cC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999986532110 01 11233567788888888888888877755
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-97 Score=954.22 Aligned_cols=777 Identities=14% Similarity=0.152 Sum_probs=572.3
Q ss_pred CCCEEEEECChhH-HHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHH----hCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLK----KFNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gG-IG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~----~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
.+|++|||||++| ||+++|++|+++|++++++.+|+. ..++..+++. ..|.++.++.||++|.++++++++++.
T Consensus 674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~ 753 (1887)
T 2uv8_A 674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 753 (1887)
T ss_dssp TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 5799999999998 999999999999997776656654 3344444442 236789999999999999999999999
Q ss_pred hh-----cC-CccEEEEcCcccCccc-hhccCC--HHHHHHHHhhhhhHHHHHHHHH--HHHHHHHhcCCCcEEEEecCc
Q psy612 141 NN-----IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYAL--ENTILKLQKNKLDFVCYFSSS 209 (1005)
Q Consensus 141 ~~-----~g-~idgvIh~AG~~~~~~-~~~~~t--~~~~~~~l~~kv~g~~~L~~~~--~~~l~~~~~~~~~~iV~~SSi 209 (1005)
++ +| +||+||||||+.. .. ++.+++ .++|++++++|+.|++++++++ .|. +...+.++||++||+
T Consensus 754 ~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~---m~~~~~G~IVnISS~ 829 (1887)
T 2uv8_A 754 DTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARG---IETRPAQVILPMSPN 829 (1887)
T ss_dssp SCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTT---CCSCCEEEEEEECSC
T ss_pred HhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhh---hhhCCCCEEEEEcCh
Confidence 88 67 9999999999987 66 888998 8999999999999999999987 455 334456899999999
Q ss_pred ccccCCCCChhhhHHHHHHHHH-HHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHH
Q psy612 210 SAILGDFGSCDYAMGNRFQTVY-AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 288 (1005)
Q Consensus 210 a~~~g~~g~~~Yaaana~l~~l-a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~ 288 (1005)
++..+ +++.|+++|+++++| ++.++.+.. .. +++.+|.||.+.+++|..... .........+++.+++++...
T Consensus 830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela--~~-IrVNaV~PG~V~tT~m~~~~~-~~~~~~~~~plr~~sPEEVA~ 903 (1887)
T 2uv8_A 830 HGTFG--GDGMYSESKLSLETLFNRWHSESWA--NQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIEKMGVRTFSQKEMAF 903 (1887)
T ss_dssp TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT--TT-EEEEEEEECCEECC-----CC-TTHHHHHTTSCCCEEHHHHHH
T ss_pred HhccC--CCchHHHHHHHHHHHHHHHHHHHhC--CC-eEEEEEEecccccccccccch-hHHHHHHhcCCCCCCHHHHHH
Confidence 99988 788999999999999 777776532 22 799999999887577754321 222334455666779999999
Q ss_pred HHHHHHhccc-----hhhhhhc--hhh------HHH----H----------HHHhh-------c--CCCc-------c--
Q psy612 289 LFEQLLIQDK-----IQYLVLS--GEL------EKL----N----------QIINN-------I--APKV-------S-- 323 (1005)
Q Consensus 289 ~l~~~l~~~~-----~~~~v~~--~~~------~~~----~----------~~~~~-------~--~~~~-------~-- 323 (1005)
.+..++.... .+.+.++ +.+ ... . +.... . .... .
T Consensus 904 avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~lr~~l~~~~~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~ 983 (1887)
T 2uv8_A 904 NLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQ 983 (1887)
T ss_dssp HHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTSSCCEEC
T ss_pred HHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHHHHHhhhhhhhhhhhhhccchhhcccccccccccccccccc
Confidence 8887765431 1222221 221 110 0 00000 0 0000 0
Q ss_pred cccccc--ccchhHHHHHHHHHHH-HHHhCC-CCcccccCCchhhcCC--------------------------------
Q psy612 324 ENKKIN--NFNIEKFIENDIKNHI-CNILNT-KKSEIYKNKNLADYGF-------------------------------- 367 (1005)
Q Consensus 324 ~~~~~~--~~~~~~~~~~~l~~~i-a~~L~~-~~~~i~~~~~l~elG~-------------------------------- 367 (1005)
...... .....+ . +.++..- .++.++ +.+++..-..|.++|.
T Consensus 984 ~~~~~~~~~p~l~~-~-~~i~~~~~~~l~g~~dl~~~~vi~gf~e~gp~g~srtR~~~e~~g~~s~~~~~elA~~mgli~ 1061 (1887)
T 2uv8_A 984 PRANIQLDFPELKP-Y-KQVKQIAPAELEGLLDLERVIVVTGFAEVGPWGSARTRWEMEAFGEFSLEGCVEMAWIMGFIS 1061 (1887)
T ss_dssp CCCCCCCCCCCCCC-H-HHHHHHSCGGGTTTSCGGGCEEEEEEEEEBTTBSHHHHHHHHHHSSCCHHHHHHHHHHTTSEE
T ss_pred chhhhcccCCCCcc-h-hhhhhcchHhhhcccchhhcceeeeccccCccccchhhhhhhhccccchhhHHHHHHHhchhh
Confidence 000000 000000 0 1121111 122222 3344444455666552
Q ss_pred ------------------------chHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhhhhhhhhcccCCC
Q psy612 368 ------------------------DSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPL 423 (1005)
Q Consensus 368 ------------------------DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~~~~~~~~~~~~~ 423 (1005)
|+-+..+++++|..+.|+.++.+++|++++... .++|.+.+ +. ...
T Consensus 1062 ~~~~~~~~~~~~gw~d~~t~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~-~~~l~~~~-------~~-~~~- 1131 (1887)
T 2uv8_A 1062 YHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEK-KEMIQEVI-------VE-EDL- 1131 (1887)
T ss_dssp EEEEEETTEEEEEEEETTTCCBCCHHHHHHHHHHHHHHTSSEEECCGGGGTTCCTTS-EEEEEEEE-------CS-SCC-
T ss_pred hccccccccCCccccccccCCccchhhhHHHHHHHHHHhcCCCCCCcccCCCCCHHH-HHHHHHHH-------hc-ccc-
Confidence 122333446666666666666666666665533 01110000 00 000
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCCcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCccccc
Q psy612 424 KTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFD 503 (1005)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~ 503 (1005)
++..... .. ...+. ....++|+|++ ..++++||++|.+|++++.+.+.
T Consensus 1132 -------~~~~~~~------~~--a~~~~------~~~~~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~~---- 1179 (1887)
T 2uv8_A 1132 -------EPFEASK------ET--AEQFK------HQHGDKVDIFE-------IPETGEYSVKLLKGATLYIPKAL---- 1179 (1887)
T ss_dssp -------CCEEECH------HH--HHHHH------HHHGGGEEEEE-------CTTTSCEEEEECTTCEEEEEEEE----
T ss_pred -------cccccCc------cc--hhhHh------hcCCCceeEee-------cCchHHHHHHHHcCCceeecccC----
Confidence 0000000 00 00000 01246788885 35678999999999999987432
Q ss_pred ccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChhhhccCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceE
Q psy612 504 WKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIG 578 (1005)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----~~~~~~G 578 (1005)
+.+.+++|+++ +.||+.||||++++++.|||++|++|+++||||+||||+ +.+ +.+.++|
T Consensus 1180 -------------~~~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vG 1244 (1887)
T 2uv8_A 1180 -------------RFDRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1244 (1887)
T ss_dssp -------------CCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEE
T ss_pred -------------CCCccEEEEEC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeE
Confidence 22457889997 469999999999999999999999999999999999995 666 7889999
Q ss_pred EEEeeccCCccc-----------cccccccccccchhHHHHHHHH-HhCCCCCcccccccchhHHHHHHHHHHHHhcCCc
Q psy612 579 MFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHEC 646 (1005)
Q Consensus 579 v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a~ris~-~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~ 646 (1005)
||+|++.+.+.. ....+..++++..+.+++||++ +||++||+++|++|||||++|||+||++|++|+|
T Consensus 1245 v~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~a 1324 (1887)
T 2uv8_A 1245 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKA 1324 (1887)
T ss_dssp ECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSC
T ss_pred EEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCC
Confidence 999998765211 1122334455667889999999 5999999999999999999999999999999999
Q ss_pred CEEEEeecccCCCHHHHHHHHHcCCCC-----------CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEE
Q psy612 647 DTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 715 (1005)
Q Consensus 647 d~alvggv~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~av 715 (1005)
|+|||||++. ++|..+..|..++++| |++.|||||.+++||++|||+|++||+++++|+++|++|||+
T Consensus 1325 dvaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~av 1403 (1887)
T 2uv8_A 1325 RICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGI 1403 (1887)
T ss_dssp SEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEE
T ss_pred CEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCceEEE
Confidence 9999999997 7899999999999999 789999999999999999999999999999999999999999
Q ss_pred EEEeeeccCCCCCCCCCCC------------------HH-----------------------------------------
Q psy612 716 IRGSGINYDGKTNGITAPN------------------GI----------------------------------------- 736 (1005)
Q Consensus 716 I~g~~~~~dG~~~~~~~p~------------------~~----------------------------------------- 736 (1005)
|+|+++|+||.+.++++|+ +.
T Consensus 1404 I~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~ 1483 (1887)
T 2uv8_A 1404 VAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQN 1483 (1887)
T ss_dssp EEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCH
T ss_pred EeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchh
Confidence 9999999999877776664 21
Q ss_pred --HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcc
Q psy612 737 --SQ-------------------------------TELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 783 (1005)
Q Consensus 737 --~q-------------------------------~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~ 783 (1005)
+| .++|++||+++|++|+||+|||+|||||++||++|.++|.++|+.
T Consensus 1484 ~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~ 1563 (1887)
T 2uv8_A 1484 EFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKH 1563 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhh
Confidence 45 379999999999999999999999999999999999999999985
Q ss_pred -CCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cCCCCeeeccccccccccccCcc
Q psy612 784 -KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWNTVNEKLR 861 (1005)
Q Consensus 784 -~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~~~~~~v~~~~~~w~~~~~~~r 861 (1005)
.+...++|+|+|+|+++||+++|||+++++|++++|+||+|||++|+++|||.++ ++ .+.++.+..+|. .+|
T Consensus 1564 ~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~--~l~~~~~~~~~~----~~r 1637 (1887)
T 2uv8_A 1564 LGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE--YVLYPSKTLKTD----GVR 1637 (1887)
T ss_dssp HTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCT--TEECCSSCEECS----CCC
T ss_pred hccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCcccccc--ccccccccccCC----CCC
Confidence 3334567999999999999999999999999999999999999999999999985 43 566788888883 468
Q ss_pred EEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhC
Q psy612 862 IGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN 928 (1005)
Q Consensus 862 ~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~ 928 (1005)
+++||||||||+|+|+||++++..... .. ...+-..++|.+..+++..+.+.+.+..+
T Consensus 1638 ~a~v~SFGFGG~NahvIle~p~~~~~~-l~--------~~~~~~y~~r~~~r~~~~~~~~~~~~~~~ 1695 (1887)
T 2uv8_A 1638 AVSITSFGFGQKGGQAIVVHPDYLYGA-IT--------EDRYNEYVAKVSAREKSAYKFFHNGMIYN 1695 (1887)
T ss_dssp EEEEEEEETTTEEEEEEEECTHHHHTT-SC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEccCCCCCccEEEEEecCCchhhc-cC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999986532110 00 11233467777777777777777777654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-100 Score=949.41 Aligned_cols=743 Identities=14% Similarity=0.166 Sum_probs=541.9
Q ss_pred CCCEEEEECChhH-HHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gG-IG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
.+|++|||||++| ||+++|++|+++|++++++.+|+. ..++..+++.+ .|.++.+++||++|.++++++++++.
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~ 554 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 554 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 5899999999998 999999999999998777756653 34445555532 26789999999999999999999999
Q ss_pred hh-----cC-CccEEEEcCcccCccc-hhccCC--HHHHHHHHhhhhhHHHHHHHHH--HHHHHHHhcCCCcEEEEecCc
Q psy612 141 NN-----IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYAL--ENTILKLQKNKLDFVCYFSSS 209 (1005)
Q Consensus 141 ~~-----~g-~idgvIh~AG~~~~~~-~~~~~t--~~~~~~~l~~kv~g~~~L~~~~--~~~l~~~~~~~~~~iV~~SSi 209 (1005)
++ +| +||+||||||+.. .. ++.+++ .++|++++++|+.|++++++++ .|.| .+.+.++||++||+
T Consensus 555 e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M---~krggGrIVnISSi 630 (1688)
T 2pff_A 555 DTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGI---ETRPAQVILPMSPN 630 (1688)
T ss_dssp SCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTC---TTSCEEECCCCCSC
T ss_pred HhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHH---HhCCCCEEEEEECh
Confidence 88 78 9999999999976 66 788888 9999999999999999999988 5653 34456899999999
Q ss_pred ccccCCCCChhhhHHHHHHHHH-HHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHH
Q psy612 210 SAILGDFGSCDYAMGNRFQTVY-AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 288 (1005)
Q Consensus 210 a~~~g~~g~~~Yaaana~l~~l-a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~ 288 (1005)
++..| +++.|+++|+++++| ++.++.+.. .. +++.+|.||.|.+++|..... .........+++.+++++.+.
T Consensus 631 AG~~G--g~saYaASKAAL~aLttrsLAeEla--~~-IRVNaVaPG~V~TT~M~~~~e-~~~~~l~~iplR~~sPEEVA~ 704 (1688)
T 2pff_A 631 HGTFG--GDGMYSESKLSLETLFNRWHSESWA--NQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIEKMGVRTFSQKEMAF 704 (1688)
T ss_dssp TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCT--TT-EECCCCCCCCCCCCSSSCTTT-TCSTTTSSSSCCCCCCCTTHH
T ss_pred HhccC--CchHHHHHHHHHHHHHHHHHHHHcC--CC-eEEEEEEECcCcCCcccCCch-HHHHHHHhCCCCCCCHHHHHH
Confidence 99987 788999999999999 554444322 12 788899999887667754311 111223344556678999999
Q ss_pred HHHHHHhccc-----hhhhhhc--hhhHH---HHHHHhh--------------c------------CCCcc---c-----
Q psy612 289 LFEQLLIQDK-----IQYLVLS--GELEK---LNQIINN--------------I------------APKVS---E----- 324 (1005)
Q Consensus 289 ~l~~~l~~~~-----~~~~v~~--~~~~~---~~~~~~~--------------~------------~~~~~---~----- 324 (1005)
.+..++.... .+.+.++ +.+.. +...... . ..... .
T Consensus 705 aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~lr~~L~e~seir~al~~e~a~e~~l~~g~~~~~~~~~~~~~ 784 (1688)
T 2pff_A 705 NLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQ 784 (1688)
T ss_dssp HHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCC-----
T ss_pred HHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHHHHhhhcccHHHHhhhcccchhhccccccccccccccCCCC
Confidence 9988775441 2233322 22211 0000000 0 00000 0
Q ss_pred -ccccc--ccchhHHHHHHHHHHH-HHHhCC-CCcccccCCchhhc---------------CCchH-HHHHH--------
Q psy612 325 -NKKIN--NFNIEKFIENDIKNHI-CNILNT-KKSEIYKNKNLADY---------------GFDSI-SLAEF-------- 375 (1005)
Q Consensus 325 -~~~~~--~~~~~~~~~~~l~~~i-a~~L~~-~~~~i~~~~~l~el---------------G~DSL-~a~el-------- 375 (1005)
..... .....+. +.++..- .++.++ +.+++-.-..|.++ |-+|+ ..+||
T Consensus 785 ~~a~l~~~fp~l~~~--~~l~~l~~~~l~g~~dl~~v~vV~Gf~e~gp~G~srtR~emE~~g~ls~e~~vELAw~mgLi~ 862 (1688)
T 2pff_A 785 PRANIQLDFPELKPY--KQVKQIAPAELEGLLDLERVIVVTGFAEVGPWGSARTRWEMEAFGEFSLEGCVEMAWIMGFIS 862 (1688)
T ss_dssp CCCCCCCCCCCCCCC--TTHHHHTTTTTCSSSSCSSCEEEEEEEECSSSSTTTHHHHHHHSSCCHHHHHHHHHHSTTSCC
T ss_pred hhhhhccCCCCCCch--hhhccccHHHHhcccchhhceEEeccCCCCcccCccchhhhhhcccccHHHHHHHHHHhCcce
Confidence 00000 0000000 0011100 111111 22222222333333 33333 33444
Q ss_pred --------------------------------HHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhhhhhhhhcccCCC
Q psy612 376 --------------------------------SRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPL 423 (1005)
Q Consensus 376 --------------------------------~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~~~~~~~~~~~~~ 423 (1005)
+++|.+..|+.++.+++|++++... .++|.+.. +....
T Consensus 863 ~~~g~~~g~p~~gWvd~~tgepv~d~~i~~~~~~~i~~~tGiRl~~~~~fd~~~p~~-~~~L~e~~-------l~~d~-- 932 (1688)
T 2pff_A 863 YHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEK-KEMIQEVI-------VEEDL-- 932 (1688)
T ss_dssp CCSTTTTCSSSSCCCSCCSSSSTTSCCCTTTSSSSSSSGGGTTTSSSSCCSSSSSSC-CSSSEECC-------CCCCC--
T ss_pred eccccccCCCCccceecCCCCccchhHHHHHHHHHHHHhcCCCCCCCccCCCCCHHH-HhHhhHHh-------cCCCC--
Confidence 3444444555555555555555433 11111000 00000
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCCcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCccccc
Q psy612 424 KTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFD 503 (1005)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~ 503 (1005)
++...+. .....+. ....++|+|++ ..++++||++|.+|++++.+.+
T Consensus 933 -------~~~~~s~--------~~a~~~~------~~~~d~v~I~~-------i~~~eefW~~L~~G~~~i~p~~----- 979 (1688)
T 2pff_A 933 -------EPFEASK--------ETAEQFK------HQHGDKVDIFE-------IPETGEYSVKLLKGATLYIPKA----- 979 (1688)
T ss_dssp -------SCCCCCC--------CCTTHHH------HHHHHSCTTSC-------CCCCCSSSCCCCCCTTCCCCCC-----
T ss_pred -------cccccCh--------hhhhhcc------ccCCCCeEEec-------CCCHHHHHHHHHcCCCEEecCC-----
Confidence 0000000 0000000 00124455653 3567899999999999998721
Q ss_pred ccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChhhhccCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceE
Q psy612 504 WKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIG 578 (1005)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----~~~~~~G 578 (1005)
.+.+.+++|+++ +.||+.||||++++++.||||+|++|+++||||+||||+ +.+ +.++++|
T Consensus 980 ------------~~~~~~vaG~Ip--~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vG 1045 (1688)
T 2pff_A 980 ------------LRFDRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1045 (1688)
T ss_dssp ------------CCEECCSSCSCC--CCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSC
T ss_pred ------------CCCCceEEEEEC--CCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHHhccccCCceEE
Confidence 123457789987 379999999999999999999999999999999999998 655 7889999
Q ss_pred EEEeeccCCccc-----------cccccccccccchhHHHHHHHH-HhCCCCCcccccccchhHHHHHHHHHHHHhcCCc
Q psy612 579 MFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHEC 646 (1005)
Q Consensus 579 v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a~ris~-~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~ 646 (1005)
||+|++.+++.. ....+..+++...+.+++++++ +||++||+++|++|||||++||++||++|++|+|
T Consensus 1046 V~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGea 1125 (1688)
T 2pff_A 1046 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKA 1125 (1688)
T ss_dssp CCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTC
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCC
Confidence 999988766321 1123334455667889999999 8999999999999999999999999999999999
Q ss_pred CEEEEeecccCCCHHHHHHHHHcCCCC-----------CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEE
Q psy612 647 DTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 715 (1005)
Q Consensus 647 d~alvggv~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~av 715 (1005)
|+|||||++. ++|..+..|..++++| |++.|||||.+++||++|||+|++||+++++|+++|++|||+
T Consensus 1126 DvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle~Al~~G~~IyAv 1204 (1688)
T 2pff_A 1126 RICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGI 1204 (1688)
T ss_dssp SCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCE
T ss_pred CEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHHHHHHCCCceEEE
Confidence 9999999997 5788888899999998 779999999999999999999999999999999999999999
Q ss_pred EEEeeeccCCCCCCCCCC------------------CHH-----------------------------------------
Q psy612 716 IRGSGINYDGKTNGITAP------------------NGI----------------------------------------- 736 (1005)
Q Consensus 716 I~g~~~~~dG~~~~~~~p------------------~~~----------------------------------------- 736 (1005)
|+|+++|+||.+.++++| |+.
T Consensus 1205 I~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~ 1284 (1688)
T 2pff_A 1205 VAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQN 1284 (1688)
T ss_dssp ECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHH
T ss_pred EEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchh
Confidence 999999999987665555 222
Q ss_pred --HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcc
Q psy612 737 --SQ-------------------------------TELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 783 (1005)
Q Consensus 737 --~q-------------------------------~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~ 783 (1005)
+| .++|++||++||++|+||+|||+|||||++||++|.++|.++|+.
T Consensus 1285 ~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~ 1364 (1688)
T 2pff_A 1285 EFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKH 1364 (1688)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhh
Confidence 44 478999999999999999999999999999999999999999986
Q ss_pred -CCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccE
Q psy612 784 -KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRI 862 (1005)
Q Consensus 784 -~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~ 862 (1005)
.+...++|+|+|+|+++||+++|||+++++|++++|+||+|||++|+++|||.++.. ..+.++.+..+|+ .+|+
T Consensus 1365 ~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~-d~v~~p~~~~~~~----~~r~ 1439 (1688)
T 2pff_A 1365 LGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQF-EYVLYPSKTLKTD----GVRA 1439 (1688)
T ss_dssp GCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSS-CCCCSCTTCCSSS----SSSC
T ss_pred hCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcC-CceeecCccccCC----CCcE
Confidence 333456799999999999999999999999999999999999999999999998521 2455678888884 4688
Q ss_pred EEEcccCCCCceEEEEEecccc
Q psy612 863 GAVSAFGMSGTNAHIVLQEYIS 884 (1005)
Q Consensus 863 a~v~sfG~gG~nah~il~~~~~ 884 (1005)
++||||||||+|||+||++++.
T Consensus 1440 AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1440 VSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp CCCCCCCSTTCCCCCCEECSSS
T ss_pred EEEeeECCCCeeEEEEEeCCCc
Confidence 9999999999999999998653
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=926.39 Aligned_cols=825 Identities=13% Similarity=0.141 Sum_probs=581.0
Q ss_pred cCCCEEEEECChhH-HHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 66 KQGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 66 ~~~~~~lITGg~gG-IG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
-.+|++|||||++| ||+++|+.|+++|++++++.++.+. .+++.+++...|.++.+++||++|+++++++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 37899999999999 9999999999999987777665554 34455556556788999999999999999999999
Q ss_pred Hh----hcCCccEEEEcCccc----CccchhccCCHHHHHHH----HhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEe
Q psy612 140 IN----NIGPIDGVLHIAGIS----GLTSNILEANYKNFYSV----LSSKISGTIALNYALENTILKLQKNK-LDFVCYF 206 (1005)
Q Consensus 140 ~~----~~g~idgvIh~AG~~----~~~~~~~~~t~~~~~~~----l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~ 206 (1005)
.+ +||+||+||||||+. .......+.+.++|+++ +++|+.+++.+++.+.+.|+...... ...++..
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 88 899999999999982 11122333344445444 99999999999999999986532211 1334445
Q ss_pred cCcccccCCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHH
Q psy612 207 SSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHEND 285 (1005)
Q Consensus 207 SSia~~~g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~ 285 (1005)
||..+..+ +...|+++|+++.+|++.++.+ .+ ...+++++|.+|....++|...... ........+.+.++++|
T Consensus 2294 ss~~g~~g--~~~aYsASKaAl~~LtrslA~E~~~--a~~IrVn~v~PG~v~tT~l~~~~~~-~~~~~~~~~~r~~~PeE 2368 (3089)
T 3zen_D 2294 SPNRGMFG--GDGAYGEAKSALDALENRWSAEKSW--AERVSLAHALIGWTKGTGLMGQNDA-IVSAVEEAGVTTYTTDE 2368 (3089)
T ss_dssp CSSTTSCS--SCSSHHHHGGGHHHHHHHHHHCSTT--TTTEEEEEEECCCEECSTTTTTTTT-THHHHGGGSCBCEEHHH
T ss_pred CcccccCC--CchHHHHHHHHHHHHHHHHHhcccc--CCCeEEEEEeecccCCCcccccchh-HHHHHHhcCCCCCCHHH
Confidence 55444433 5668999999999999999998 33 2347888998877665776543222 22234455667779999
Q ss_pred HHHHHHHHHhccchhh-----hhh--ch-------hhHHHHHHHh----hcCCCcccc---ccccccc--hhHHHHHHHH
Q psy612 286 GLKLFEQLLIQDKIQY-----LVL--SG-------ELEKLNQIIN----NIAPKVSEN---KKINNFN--IEKFIENDIK 342 (1005)
Q Consensus 286 ~~~~l~~~l~~~~~~~-----~v~--~~-------~~~~~~~~~~----~~~~~~~~~---~~~~~~~--~~~~~~~~l~ 342 (1005)
....+..++......+ +.. .| +...+..... .......+. ....... +...-...+.
T Consensus 2369 IA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2448 (3089)
T 3zen_D 2369 MAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAREEMSGAADXXXXXXXXXXXXXXXXXXXXXXXXXXX 2448 (3089)
T ss_dssp HHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_pred HHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHHHhhhhhhhhccccccccccccccccccccccccc
Confidence 9988887654322111 111 12 2221111110 000000000 0000000 0000000000
Q ss_pred HHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh---hhhhhhhhhcc
Q psy612 343 NHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN---HNNTMIKFYRN 419 (1005)
Q Consensus 343 ~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~---~~~~~~~~~~~ 419 (1005)
+ |. -+.++.+++-.=..|.|+|-= -.-|.+++.++..++ .--++-+|| +++.- +......|+..
T Consensus 2449 ~-~~-~~~~~~~~~~vi~g~~~~~~~----g~~rt~~~~~~~~~~------~~~~~~~la-~~~gli~~~~~~~~~w~d~ 2515 (3089)
T 3zen_D 2449 X-XX-XXDVDPADLVVIVGGAELGPY----GSSRTRFEMEVSGEL------SAAGVLELA-WTTGMVKWEDDPKAGWYDT 2515 (3089)
T ss_dssp C-CC-STTSCGGGCEEEEEEEEEBTT----BSHHHHHHHHHTSSC------CHHHHHHHH-HHTTCEEEECSTTCEEEET
T ss_pred c-cc-cccCCccceEEEEccccccCc----ccccchhhccccccc------hHHHHHHHH-HHhcceeeccCCCCCCEEC
Confidence 0 00 011222222222334444421 012444444443333 233445555 33211 11111223332
Q ss_pred cCCCcccccccccccccccccccccccccccccccCC-CCCCCcC-cEEEEeeccccC-CCCCHHHHHHHHHcCCcc--c
Q psy612 420 KYPLKTESKNISILYDNKINENYENVSKKSNFILNKN-TDINSEE-LIAIIGMSGRFP-AARNINEFWKILINNKDV--I 494 (1005)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~IaIvG~~~~~P-~~~~~~~fw~~L~~g~~~--i 494 (1005)
+.-++-+...+...+...+.+. ...+...... ...+... ...-|-+.--++ ...+.++.|+...++.+. |
T Consensus 2516 ~~~~~~~~~~i~~~~~~~i~~~-----~~ir~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~s~~~a~~~~~~~~~~~~i 2590 (3089)
T 3zen_D 2516 ETGELVPECEIVERYHDAVVER-----CGIREFVDDGAIDPDHASPLLVSVFLDKDFTFVVSSEADARAFVQFDPEHTVA 2590 (3089)
T ss_dssp TTCCBCCSSHHHHHTHHHHHHH-----SSEEECCCSSSCCSSSCEEEEEEEECSSCCCCEEECHHHHHHHHTTSTTSEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHhc-----CCeEeeCcccccccCCCCccceeeeecCCCCcccCCHHHHHHHHHhCCCcceE
Confidence 2212111112211111111100 0000000000 0000000 111222233333 357889999999876554 5
Q ss_pred cccCc-ccccccccccCCcCC--CCCccceeeeccCCCCCCCCccCCCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCC
Q psy612 495 SEIPE-KIFDWKLYYENPIKS--SNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ 571 (1005)
Q Consensus 495 ~~~p~-~r~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~ 571 (1005)
.++|. ++|+...++...... ..+.+++++|+++ +.||+.||||+++|++.||||+|++|+++|+||+||||++++
T Consensus 2591 ~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~--d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~ 2668 (3089)
T 3zen_D 2591 RPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIP--TGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTE 2668 (3089)
T ss_dssp EECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGG
T ss_pred EeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHH
Confidence 66666 889987766554222 2357889999997 579999999999999999999999999999999999999887
Q ss_pred C----CCCceEEEEeeccCCccc------cc-----cccccccccchhHHHHHHHH-HhCCCCCcccccccchhHHHHHH
Q psy612 572 I----ANQKIGMFVGVEEGSNYQ------DR-----LDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATH 635 (1005)
Q Consensus 572 ~----~~~~~Gv~~g~~~~~~~~------~~-----~~~~~~~~~~~~~~a~ris~-~~~l~Gps~~v~taCsSsl~Al~ 635 (1005)
+ .+.++|||+|+..+.+.. .. .....+++...+++++|+++ +||++||+++|++|||||++|||
T Consensus 2669 l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~ 2748 (3089)
T 3zen_D 2669 LMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVE 2748 (3089)
T ss_dssp HHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHH
T ss_pred hhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHH
Confidence 6 678999999997665321 00 01112345566789999986 56999999999999999999999
Q ss_pred HHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----------CCCCCcCCCCCCCCceecCccEEEEEcccch
Q psy612 636 IACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704 (1005)
Q Consensus 636 ~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~ 704 (1005)
+||++|++|+||+|||||+|. ++|..+..|..++++| |+++|||||.++|||++|||+|++|||++++
T Consensus 2749 ~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~ 2827 (3089)
T 3zen_D 2749 EGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDL 2827 (3089)
T ss_dssp HHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHH
T ss_pred HHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHH
Confidence 999999999999999999998 8999999999999887 6999999999999999999999999999999
Q ss_pred hhcCCCceEEEEEEeeeccCCCCCCCCCCCH-------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH--
Q psy612 705 ALSDGDPIHAIIRGSGINYDGKTNGITAPNG-------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN-- 775 (1005)
Q Consensus 705 A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~-------~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~-- 775 (1005)
|+++|++|||+|+|+++|+||++.++++|+. .+|.++|++||++||++|+||+|||+|||||++||++|++
T Consensus 2828 A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al 2907 (3089)
T 3zen_D 2828 ALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELH 2907 (3089)
T ss_dssp HHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHH
T ss_pred HHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHH
Confidence 9999999999999999999999999999973 4889999999999999999999999999999999999999
Q ss_pred -HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccc
Q psy612 776 -ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN 854 (1005)
Q Consensus 776 -al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~ 854 (1005)
++.++|+... ..+|+|+|+|+||||+++|||+++++|++++|+|++|||++|+++|||.++ ++++|+++++..+|+
T Consensus 2908 ~al~~~fg~~~--~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~-~~~~~~~~~~~~~w~ 2984 (3089)
T 3zen_D 2908 ERIADSMGRAP--GNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELA-TSGHFVWVREPLDLR 2984 (3089)
T ss_dssp HHHHHHTTCCT--TCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGG-GCSSEEECSSCBCCC
T ss_pred HHHHHHhCccC--CCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCcc-ccCCeeecCCCccCC
Confidence 7888887532 356999999999999999999999999999999999999999999999999 889999999999997
Q ss_pred ccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhCC
Q psy612 855 TVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN 929 (1005)
Q Consensus 855 ~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~ 929 (1005)
.. ..+|+++||||||||+|+|+||++++....... ...+..+|+|+++.|++..+++.+++..+.
T Consensus 2985 ~~-~~~r~a~vnSfGfGG~NahvVle~~~~~~~~~~---------~~~~~~~~~r~~~r~~~~~~~~~~~~~~~~ 3049 (3089)
T 3zen_D 2985 GK-FPLKAGLVTSLGFGHVSGLVALVHPEAFIAALD---------PSEREDYRTRAEQRMLAGQRRLVSAIAGGR 3049 (3089)
T ss_dssp TT-SCCCEEEEEEEETTTEEEEEEEECGGGTGGGSH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC-CCCCEEEEccccCCCCeEEEEEecCchhhhccC---------hHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 53 457999999999999999999999864421110 124567999999999999999999998775
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-79 Score=715.40 Aligned_cols=398 Identities=24% Similarity=0.381 Sum_probs=358.6
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCC---CCCCCCccCC
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG---IDEFDPLFFE 538 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~FD~~~f~ 538 (1005)
.++||||||+|++|++.++++||++|.+|+++++++|. |+.. ..+.+++|++++ ++.||+.||
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~-----------~~~~~~~~~~~~~~~~~~fd~~~~- 85 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVG--EEYK-----------SIPCSVAAYVPRGSDEGQFNEQNF- 85 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCS--GGGT-----------TSSCCEEECCCBSSSTTSBCGGGT-
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCc--hhcc-----------cCccceeeeeccccccccCChhhc-
Confidence 46799999999999999999999999999999999984 5432 234578899876 678999999
Q ss_pred CChhhhccCCHHHHHHHHHHHHHHHhcCCCC-CCCCCCceEEEEeeccCCcc-------------ccccccccccccchh
Q psy612 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGP-NQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNA 604 (1005)
Q Consensus 539 is~~ea~~mdpq~rl~L~~a~~AledAG~~~-~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~ 604 (1005)
|+++|++.|||++|++++++|+||+|||+++ +++++.++|||+|+..+++. ...++++.+++...+
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 165 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVN 165 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhh
Confidence 9999999999999999999999999999988 77878899999998776531 112344455566678
Q ss_pred HHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC----CCCCcC
Q psy612 605 ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP----DGKCYV 680 (1005)
Q Consensus 605 ~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~----~g~~~p 680 (1005)
+++++|++.|||+||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..++++|+ ++.|+|
T Consensus 166 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~p 245 (438)
T 2iwz_A 166 MAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRP 245 (438)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCT
T ss_pred HHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCccccc
Confidence 8999999999999999999999999999999999999999999999999998889999999999999997 899999
Q ss_pred CCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy612 681 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 681 fd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve 760 (1005)
||.+++||++|||++++|||++++|+++|++||++|+|+++++||++.....|+..+|.++|++||++||++|+||+|||
T Consensus 246 fd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve 325 (438)
T 2iwz_A 246 FHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN 325 (438)
T ss_dssp TCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 99999999999999999999999999999999999999999999986333334779999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
+|||||++||++|.++|.++|+... .+|+|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 326 ~HgtgT~~gD~~E~~al~~~fg~~~---~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~ 402 (438)
T 2iwz_A 326 AHATSTPLGDAAENKAIKHLFKDHA---YALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN 402 (438)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGG---GTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSB
T ss_pred ecCCCCcccCHHHHHHHHHHHhccC---CCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence 9999999999999999999997542 3489999999999999999999999999999999999999999999999775
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++|+. ..+|++++|||||||+|+|+||+++
T Consensus 403 ----~v~~~~~~~~~--~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 403 ----YVPLKAQEWKT--EKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp ----CCBSSCEECCC--SSSCEEEEEEEETTTEEEEEEEECC
T ss_pred ----ccCCCcccCCC--CCccEEEEecCcCCCeeEEEEEeeC
Confidence 56778889973 3468999999999999999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-78 Score=705.40 Aligned_cols=395 Identities=22% Similarity=0.347 Sum_probs=357.8
Q ss_pred CCcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCC
Q psy612 460 NSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 539 (1005)
Q Consensus 460 ~~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 539 (1005)
..+++||||||+|++|++.++++||++|.+|+++++++| ||+... ...+++|++++ ||+.+| |
T Consensus 15 ~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~~---fd~~~~-i 77 (427)
T 3ho9_A 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSA-----------YATKFAGLVKD---FNCEDI-I 77 (427)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTT-----------CSCCEEECCSS---CCCTTT-S
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCC--cccccc-----------CccceeeEcCC---CChhhc-C
Confidence 456789999999999999999999999999999999987 565432 24567787754 999999 9
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHH
Q psy612 540 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAIL 606 (1005)
Q Consensus 540 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~ 606 (1005)
+++|++.||||+|++++++|+||+|||+.++++++.++|||+|+..+.+.. ....+..+++...+++
T Consensus 78 ~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
T 3ho9_A 78 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV 157 (427)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHH
Confidence 999999999999999999999999999999999999999999987654211 1234455667778899
Q ss_pred HHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCC
Q psy612 607 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVF 681 (1005)
Q Consensus 607 a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pf 681 (1005)
++|||+.||++||+++|++||||+++||++|+++|++|+||+|||||++.+++|..+..|...++++ |+++|+||
T Consensus 158 a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pf 237 (427)
T 3ho9_A 158 AGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237 (427)
T ss_dssp HHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTT
T ss_pred HHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 45689999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
|.+++||++|||+++||||++++|+++|++||++|+|+++++||++.....|++.+|.++|++||++||++|+||+|||+
T Consensus 238 d~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 317 (427)
T 3ho9_A 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNA 317 (427)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred cCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEe
Confidence 99999999999999999999999999999999999999999999875555668899999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
|||||+.+|++|..++.++|+... .+++++++|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 318 HgtgT~~~d~~e~~a~~~~~g~~~---~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~- 393 (427)
T 3ho9_A 318 HGTSTPAGDKAEAQAVKTIFGEAA---SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLD- 393 (427)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGG---GTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCB-
T ss_pred cCCcCCCcCHHHHHHHHHHhcccC---CCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc-
Confidence 999999999999999999998642 3489999999999999999999999999999999999999999999999876
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++|+ +.|++++|||||||+|+|+||++|
T Consensus 394 ---~~~~~~~~~~----~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 394 ---FVPHEARQVS----GMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp ---CCBSSCEECS----SCCEEEEEEEETTTEEEEEEEECC
T ss_pred ---ccccccccCC----CCCEEEEeCccCCceeEEEEEEeC
Confidence 5667778884 358999999999999999999975
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-78 Score=708.27 Aligned_cols=393 Identities=21% Similarity=0.357 Sum_probs=351.7
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||+|++|++.++++||++|.+|++++++++ ||+... .+.++++++ .||+.||+|+++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~~----~fd~~~~~i~~~ 65 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS--FFDPSP-----------YRSQVAAEA----DFDPVAEGFGPR 65 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTT-----------SSCCEEECC----CCCHHHHTCCHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCC--Cccccc-----------CCcceeEEe----ccCHhhcCCCHH
Confidence 479999999999999999999999999999999986 465432 234566766 599999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc---------------cccccccccccchh---
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ---------------DRLDQVNLTSTHNA--- 604 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~---------------~~~~~~~~~~~~~~--- 604 (1005)
|++.||||+|++++++|+||+|||++++++++.++|||+|+..+++.. ....++..+....+
T Consensus 66 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 145 (424)
T 1tqy_A 66 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP 145 (424)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccccc
Confidence 999999999999999999999999999999999999999988765421 11223333333333
Q ss_pred -HHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCC
Q psy612 605 -ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKC 678 (1005)
Q Consensus 605 -~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~ 678 (1005)
+++++|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..++++++ ++.|
T Consensus 146 ~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~ 225 (424)
T 1tqy_A 146 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHAS 225 (424)
T ss_dssp THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCC
T ss_pred chhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCc
Confidence 4455999999999999999999999999999999999999999999999999899999999999999986 7899
Q ss_pred cCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy612 679 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINY 758 (1005)
Q Consensus 679 ~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~y 758 (1005)
||||.++|||++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||+++|++|+||+|
T Consensus 226 rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ 305 (424)
T 1tqy_A 226 RPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDY 305 (424)
T ss_dssp CTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999886666777899999999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII 838 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~ 838 (1005)
||+|||||++||++|.++|.++|+... ..++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++
T Consensus 306 ve~Hgtgt~~gD~~E~~al~~~f~~~~---~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~ 382 (424)
T 1tqy_A 306 INAHGSGTRQNDRHETAAYKRALGEHA---RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD 382 (424)
T ss_dssp EECCCCCCHHHHHHHHHHHHHHTGGGG---GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred EEecCccCcCcCHHHHHHHHHHhcccC---CCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence 999999999999999999999997542 34889999999999999999999999999999999999999999999998
Q ss_pred cCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecccc
Q psy612 839 LKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 884 (1005)
Q Consensus 839 ~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 884 (1005)
++ +++.+.++|+ +|++++|||||||+|+|+||+++++
T Consensus 383 ~~----~v~~~~~~~~-----~~~a~~~sfG~GG~n~~~vl~~~~~ 419 (424)
T 1tqy_A 383 LD----YVPLEARERK-----LRSVLTVGSGFGGFQSAMVLRDAET 419 (424)
T ss_dssp SC----CCBSSCEECC-----CSEEEEEEEETTTEEEEEEEECHHH
T ss_pred cc----cCCCcccCCC-----CCEEEEccccCCceEEEEEEccCCc
Confidence 75 3556667774 5889999999999999999998753
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-78 Score=702.06 Aligned_cols=389 Identities=20% Similarity=0.309 Sum_probs=354.4
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
..++||||||+|++|++.++++||++|.+|+++++++| ||+...+ ..+++|+++ .||+.|| |+
T Consensus 7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v~---~fd~~~~-~~ 69 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRY-----------PATLAGQID---DFHAPDH-IP 69 (415)
T ss_dssp ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGS-----------SCCEEECCC---SCCHHHH-SC
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECC--cccccCC-----------CcceEEEeC---CCCchhc-CC
Confidence 45789999999999999999999999999999999997 6765432 246788875 4999988 99
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHH
Q psy612 541 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 541 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 607 (1005)
+++++.|||++|++++++|+||+|||++++++++.++|||+|+..+++.. ...+++.+++...++++
T Consensus 70 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 149 (415)
T 1tqy_B 70 GRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNT 149 (415)
T ss_dssp TTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHH
Confidence 99999999999999999999999999999999999999999988765421 12345556667778999
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC----CCCCCcCCCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDE 683 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~ 683 (1005)
++|++.||++||+++|+++||||++||++|+++|++| ||+|||||++..++|..+..|..+++|| ++++|+|||.
T Consensus 150 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~ 228 (415)
T 1tqy_B 150 GQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDE 228 (415)
T ss_dssp HHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTST
T ss_pred HHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999 9999999999999999999999999999 9999999999
Q ss_pred CCCCceecCccEEEEEcccchhhcCCC-ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 684 RANGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 684 ~a~G~~~gEGa~~vvLk~l~~A~~~g~-~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
++||+++|||++++|||++++|+++|+ +||++|+|+++++||++ ++.|+. +|.++|++||++||++|+||+|||+|
T Consensus 229 ~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~--~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~H 305 (415)
T 1tqy_B 229 RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP--GSGRPA-GLERAIRLALNDAGTGPEDVDVVFAD 305 (415)
T ss_dssp TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCT--TCCCCC-SHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCC--CCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEEe
Confidence 999999999999999999999999999 99999999999999987 788887 99999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
||||++||++|+.++.++|+.. .++|+|+|+|+||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 306 gtgt~~~D~~E~~al~~~~g~~-----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~-- 378 (415)
T 1tqy_B 306 GAGVPELDAAEARAIGRVFGRE-----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID-- 378 (415)
T ss_dssp CCCSHHHHHHHHHHHHHHHCTT-----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCE--
T ss_pred CCCCcCcCHHHHHHHHHHhCCC-----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc--
Confidence 9999999999999999999653 289999999999999999999999999999999999999999999998764
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEecccc
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 884 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 884 (1005)
+++.+.++| .+|++++|||||||+|+|+||+++++
T Consensus 379 --~v~~~~~~~-----~~~~a~~~sfGfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 379 --LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRFAP 413 (415)
T ss_dssp --ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC--
T ss_pred --ccCCCCccC-----CCCEEEEecCcCCCeEEEEEEecCCC
Confidence 567777888 35889999999999999999999754
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-78 Score=699.53 Aligned_cols=391 Identities=25% Similarity=0.375 Sum_probs=352.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|+||||+|++|++.++++||++|.+|++++++++ ||+.. ..+.+++|+++ .||+.| +|+++
T Consensus 7 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~-----------~~~~~~~~~i~---~fd~~~-~~~~~ 69 (416)
T 1e5m_A 7 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDAS-----------DQACRFGGEVK---DFDATQ-FLDRK 69 (416)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCT-----------TSSCCEEECCC---SCCGGG-TSCHH
T ss_pred CCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCC--ccccc-----------cCccceeEEeC---CCCccc-cCCHH
Confidence 579999999999999999999999999999999886 56532 23456778775 499987 59999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 609 (1005)
|++.||||+|++++++|+||+|||++++++++.++|||+|+..+++. .....++.+++...++++++
T Consensus 70 ~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 149 (416)
T 1e5m_A 70 EAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGL 149 (416)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999998766521 11234455566667889999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~ 684 (1005)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..++++| |++.|||||.+
T Consensus 150 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 229 (416)
T 1e5m_A 150 TAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKD 229 (416)
T ss_dssp HHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTT
T ss_pred HHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccC
Confidence 9999999999999999999999999999999999999999999999988999999999999998 58899999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
+||+++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||++||++|+||+|||+|||
T Consensus 230 ~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt 309 (416)
T 1e5m_A 230 RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGT 309 (416)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECC
Confidence 99999999999999999999999999999999999999999874444557889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||++||++|+++|.++|+... .+++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 310 gt~~~D~~E~~al~~~~g~~~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~---- 382 (416)
T 1e5m_A 310 STPANDVTETRAIKQALGNHA---YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLD---- 382 (416)
T ss_dssp SCHHHHHHHHHHHHHHHGGGG---GGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSC----
T ss_pred CCcCcCHHHHHHHHHHHcccC---CCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 999999999999999997542 3489999999999999999999999999999999999999999999998765
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++|+ +|++++|||||||+|+|+||++|
T Consensus 383 ~v~~~~~~~~-----~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 383 YVPGQSRALI-----VDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CCBSSCEECC-----CSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCCccccCC-----CCEEEEccccCCCeeEEEEEEeC
Confidence 3566677773 58899999999999999999986
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-77 Score=697.45 Aligned_cols=392 Identities=23% Similarity=0.354 Sum_probs=352.9
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||+|++|++.++++||++|.+|++++++++ ||+.. ..+.+++|+++ .||+.| +|+++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~-----------~~~~~~~~~i~---~fd~~~-~~~~~ 90 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKIT--RIDTE-----------PYSVHLAGELK---NFNIED-HIDKK 90 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCT-----------TSSCCEEECCS---SCCGGG-TSCST
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCC--ccccc-----------cCccceeEEeC---CCChhc-CCCHH
Confidence 679999999999999999999999999999999986 46533 23456778775 499876 69999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 609 (1005)
|++.||||+|++++++|+||+|||++++++++.++|||+|+..+++. .....++.+++...++++++
T Consensus 91 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 170 (437)
T 2gqd_A 91 EARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQ 170 (437)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHH
Confidence 99999999999999999999999999999999999999998766521 11234445556667789999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC----CCCCCcCCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERA 685 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~a 685 (1005)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..++++| |++.|+|||.++
T Consensus 171 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~ 250 (437)
T 2gqd_A 171 VSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGR 250 (437)
T ss_dssp HHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTC
T ss_pred HHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999989999999999999998 688999999999
Q ss_pred CCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 686 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 686 ~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
||+++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||++||++|+||+|||+||||
T Consensus 251 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgtg 330 (437)
T 2gqd_A 251 DGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTS 330 (437)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred CCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCC
Confidence 99999999999999999999999999999999999999998644444577899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCee
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~ 845 (1005)
|++||++|+++|.++|+... .+|+|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++ +
T Consensus 331 T~~~D~~E~~al~~~fg~~~---~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~----~ 403 (437)
T 2gqd_A 331 TPVGDLNEVKAIKNTFGEAA---KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLD----I 403 (437)
T ss_dssp CHHHHHHHHHHHHHHHGGGG---TSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSB----C
T ss_pred CcCcCHHHHHHHHHHHhccC---CCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence 99999999999999997642 3489999999999999999999999999999999999999999999999775 3
Q ss_pred eccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 846 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 846 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
++.+.++|+ +|++++|||||||+|+|+||++|.
T Consensus 404 v~~~~~~~~-----~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 404 VPNEAQDLD-----ITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp CBSSCEECC-----CSEEEEEEECGGGEEEEEEEECCC
T ss_pred CCCccccCC-----CCEEEEccCcCCCeeEEEEEEecc
Confidence 556666773 588999999999999999999863
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-78 Score=696.86 Aligned_cols=382 Identities=24% Similarity=0.332 Sum_probs=342.3
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||+|++|++.++++||++|.+|+++++++| ||+... .+.+++|+++ ||+.+| |+++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~----fd~~~~-~~~~ 63 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ--ELKDSG-----------MRSHVWGNVK----LDTTGL-IDRK 63 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECH--HHHHTT-----------CSCCEEECCC----CCCTTS-SCHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCC--cccccC-----------CccceEEEec----CChhhc-CCHH
Confidence 469999999999999999999999999999999987 465332 2346677764 999999 9999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCC-CceEEEEeeccCCccc--------------cccccccccccchhHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIAN-QKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~-~~~Gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a 607 (1005)
|++.|||++|++++++|+||+|||++++++++ .++|||+|+..+++.. ...+++.+++...++++
T Consensus 64 ~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 143 (406)
T 2vba_A 64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS 143 (406)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHH
Confidence 99999999999999999999999998888877 8999999988765411 12344555666778999
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 681 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pf 681 (1005)
++||+.||++||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+. |..++++| |+++||||
T Consensus 144 ~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pf 222 (406)
T 2vba_A 144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTY 222 (406)
T ss_dssp HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTT
T ss_pred HHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcC
Confidence 999999999999999999999999999999999999999999999999988887777 99999998 68999999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
|.++|||++|||++++|||++++|+++|++||++|+|+++++||++ +++|++.+|.++|++||++|| +||+|||+
T Consensus 223 d~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~t~p~~~~~~~ai~~al~~ag---~dId~ve~ 297 (406)
T 2vba_A 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNS 297 (406)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTCC---SCCCEEEC
T ss_pred cCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHhhCC---CCccEEEe
Confidence 9999999999999999999999999999999999999999999974 789999999999999999999 89999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc-cC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LK 840 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~-~~ 840 (1005)
|||||++||++|.++|.++|+... ++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++ ++
T Consensus 298 HgtgT~~gD~~E~~al~~~fg~~~-----~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~ 372 (406)
T 2vba_A 298 HGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN 372 (406)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCC-----CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE
T ss_pred eCccCcccCHHHHHHHHHHhCcCC-----CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccc
Confidence 999999999999999999997532 789999999999999999999999999999999999999999999886 32
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
+++...+ . .+|++++|||||||+|+|+||++++
T Consensus 373 ----~v~~~~~-----~-~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 373 ----IVTETTD-----R-ELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp ----ECCSCEE-----C-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred ----cCCcccC-----C-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 2322211 1 4689999999999999999999863
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-77 Score=692.22 Aligned_cols=387 Identities=23% Similarity=0.349 Sum_probs=350.6
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++||||||+|++|++.++++||++|.+|+++++++|. |+.. .....+++|.++ .||+.|| |++
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~----------~~~~~~~~~~v~---~fd~~~~-i~~ 68 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD--WDYF----------ESLHTRLAAPLP---GFAQPAD-WPR 68 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGG--GGGS----------SSCCCCEEBCCS---CCCCCTT-SCH
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCc--cccc----------cCCccceeeecC---CCChhhh-CCH
Confidence 46799999999999999999999999999999999985 4322 012345667664 5999999 999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCC-CCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGY-GPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~-~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a 607 (1005)
++++.|||++|++++++++||+|||+ +++++++.++|||+|+..+.+. .....+..+++...++++
T Consensus 69 ~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 148 (412)
T 4ewg_A 69 KKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTA 148 (412)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHH
Confidence 99999999999999999999999999 7778889999999998775421 112344555667778999
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFD 682 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd 682 (1005)
++||+.||++||+++|+++||||++||++|+++|++|+||++||||++. ++|.....|...+.+++ ++.|||||
T Consensus 149 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd 227 (412)
T 4ewg_A 149 VNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFD 227 (412)
T ss_dssp HHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTB
T ss_pred HHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999998 89999999999999986 79999999
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
.++|||++|||+++||||++++|+++|++||++|+|+++++||++ +++|++.+|.++|++||++||++|+||+|||+|
T Consensus 228 ~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~--~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H 305 (412)
T 4ewg_A 228 AKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAH--MTQPTASTMARAMQLALEDAKLDANAIAYVNAH 305 (412)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC--SSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 999999999999999999999999999999999999999999974 889999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc-ccCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI-ILKN 841 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i-~~~~ 841 (1005)
||||++||++|.++|.++|+.. ++|+|+|+|+||+++|||+++++|++++|++++|||++||++|||.+ +++
T Consensus 306 gtgt~~~D~~E~~al~~~~~~~------~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~- 378 (412)
T 4ewg_A 306 GTSTDRGDVAESQATARTFGER------MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLD- 378 (412)
T ss_dssp CCCCHHHHHHHHHHHHHHHCTT------CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCE-
T ss_pred CCCCccccHHHHHHHHHHcCCC------CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccc-
Confidence 9999999999999999999742 78999999999999999999999999999999999999999999988 554
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++|+ .|++++|||||||+|+|+||+++
T Consensus 379 ---~v~~~~~~~~-----~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 379 ---YIRGEARAID-----AEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp ---ECCSSCEECC-----CSEEEEEEEEGGGEEEEEEEECC
T ss_pred ---cccCcccCCC-----CCEEEEeeecCCcceEEEEEeeC
Confidence 4566666663 58999999999999999999976
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-77 Score=695.18 Aligned_cols=387 Identities=24% Similarity=0.306 Sum_probs=345.3
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+||||+|++|++.++++||++|.+|+++++++|. |+... ...+++|++ .||+.|| |++
T Consensus 22 m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~~-----------~~~~~~g~~----~fd~~~~-i~~ 83 (428)
T 3mqd_A 22 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEE--YAELG-----------FRCQVHGAP----DIDIESL-VDR 83 (428)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH--HHHTT-----------CSCCEEECC----CCCHHHH-SCT
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCc--ccccC-----------CCccccccc----CCChhhc-CCH
Confidence 46899999999999999999999999999999999884 44321 234566662 5999999 999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ 608 (1005)
++++.|||++|++++++++||+|||++++++++.++|||+|+..+++. .....++.+++...+++++
T Consensus 84 ~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 163 (428)
T 3mqd_A 84 RAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASA 163 (428)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHH
Confidence 999999999999999999999999999999999999999999866533 1234556667777889999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFD 682 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pfd 682 (1005)
|||+.||++||+++|+++||||++||++|+++|++|+||+|||||++. +++.....|..+++++ |+++|+|||
T Consensus 164 ~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd 242 (428)
T 3mqd_A 164 TLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYD 242 (428)
T ss_dssp HHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTB
T ss_pred HHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCccc
Confidence 999999999999999999999999999999999999999999999998 6677777799999988 568999999
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
.++|||++|||+++||||++++|+++|++|||+|+|+++++||++ +++|++.+|.++|++||+ |++ +||+|||+|
T Consensus 243 ~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~H 317 (428)
T 3mqd_A 243 KNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYD--MVAPSGEGAIRCMKMALS--TVT-SKIDYINPH 317 (428)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--SSSCCSHHHHHHHHHHHT--TCC-SCCCEEECC
T ss_pred CCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHh--CCc-cccCEEEEe
Confidence 999999999999999999999999999999999999999999975 789999999999999999 999 999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
||||++||++|.++|.++|+... ..++|+|+|+||||+++|||+++++|++++|+|++|||++||++|||.++
T Consensus 318 gtgT~~~D~~E~~al~~~~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~---- 390 (428)
T 3mqd_A 318 ATSTPAGDAPEIEAIRQIFGAGD---VCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFA---- 390 (428)
T ss_dssp CCSCHHHHHHHHHHHHHHHCSGG---GSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGT----
T ss_pred CCCCCCcCHHHHHHHHHHhcccC---CCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccc----
Confidence 99999999999999999998422 12689999999999999999999999999999999999999999999875
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
.+.+..+..+| .++|++++|||||||+|+|+||++|+
T Consensus 391 ~~~~~~~~~~~----~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 391 DMPIVRKRIDN----VQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp TSCBCSSCEES----CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cCCccCCcccc----CCCCEEEEecCcCCcceEEEEEeecC
Confidence 12233333333 24689999999999999999999874
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-76 Score=687.55 Aligned_cols=393 Identities=23% Similarity=0.358 Sum_probs=354.7
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+||||||++|++.++++||++|.+|++++++++ ||+...+ +.++++.+ +.||+.|| |++
T Consensus 3 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v---~~fd~~~~-i~~ 65 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMT--RLNPDDF-----------PVKIAAEL---KDFDVEKY-LEK 65 (413)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCGGGS-----------SCCEEECC---SSCCGGGT-SCH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCC--ccccccC-----------cccccccc---CCCChhhc-cCH
Confidence 3579999999999999999999999999999999986 4554332 23455654 45999999 999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ 608 (1005)
+|++.|||++|++++++|+||+|||++++++++.++|||+|+..+... .....+..+++...+++++
T Consensus 66 ~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 145 (413)
T 3o04_A 66 KEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSG 145 (413)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHH
Confidence 999999999999999999999999999999999999999998765421 1123455566777888999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC----CCCCCcCCCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDER 684 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~ 684 (1005)
+||+.||++||+++|+++|||+++||++|+++|++|+||++||||++..++|..+..|...+++| |+++|+|||.+
T Consensus 146 ~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~ 225 (413)
T 3o04_A 146 QVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKD 225 (413)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTT
T ss_pred HHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
++||++|||++++||+++++|.++|++||++|+|+++++||++...+.|+..+|.+++++||++||++|+||+|||+|||
T Consensus 226 ~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~Hgt 305 (413)
T 3o04_A 226 RDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGT 305 (413)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 99999999999999999999999999999999999999999987777788899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||++||++|.++|.++|+... .+++|+++|+++||+++|||+++++|++++|++++|||++||++|||.++++.
T Consensus 306 gT~~~d~~e~~al~~~~~~~~---~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 379 (413)
T 3o04_A 306 STPYNDEYETQAIKTVFGEHA---KKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDY--- 379 (413)
T ss_dssp CCHHHHHHHHHHHHHHHGGGT---TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCC---
T ss_pred cCcccCHHHHHHHHHHhcccC---CCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCccc---
Confidence 999999999999999998653 34899999999999999999999999999999999999999999999998763
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
++.+.++| +.|++++|||||||+|+|+||++|.
T Consensus 380 -~~~~~~~~-----~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 380 -VPNEAREA-----NVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp -CBSSCEEC-----CCCEEEEEEEETTTEEEEEEEECCC
T ss_pred -CCCcccCC-----CCCEEEEeCccCCceEEEEEEEeCC
Confidence 33443333 4689999999999999999999873
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-76 Score=685.08 Aligned_cols=390 Identities=24% Similarity=0.304 Sum_probs=350.1
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
..++||||||+|++|++.++++||++|.+|+++++++| ||+... ...+.+++|++++ |+.|| |+
T Consensus 26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~v~~----d~~~~-~~ 89 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLD--DPFVEE---------FDLPVRIGGHLLE----EFDHQ-LT 89 (434)
T ss_dssp TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECC--CHHHHH---------HCCSCCEEECCSC----CSTTS-SC
T ss_pred CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCC--cccccc---------ccCccceeEEcCC----chhhh-CC
Confidence 35689999999999999999999999999999999998 465221 1234578898875 77777 99
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHH
Q psy612 541 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 541 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 607 (1005)
++|++.||||+|++++++|+||+|||+ +++.+.++|||+|+..+++.. ....++.+++...++++
T Consensus 90 ~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 167 (434)
T 2gp6_A 90 RIELRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAA 167 (434)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHTTC--CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhcCC--CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHH
Confidence 999999999999999999999999999 567789999999998776521 12344556666778899
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcC-CCC-----CCCCCcCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG-MLS-----PDGKCYVF 681 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~-~ls-----~~g~~~pf 681 (1005)
++|++.||++||+++|+++|||+++||++|+++|++|+||++||||++..+.|..+..|+..+ +++ |+++|+||
T Consensus 168 ~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pf 247 (434)
T 2gp6_A 168 AAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPF 247 (434)
T ss_dssp HHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSS
T ss_pred HHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecc
Confidence 999999999999999999999999999999999999999999999999999999999999999 888 78999999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
|.+++|+++|||++++|||++++|+++|++||++|+|+++++||++.....|+..+|.++|++||++||++|+||+|||+
T Consensus 248 d~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 327 (434)
T 2gp6_A 248 DRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNA 327 (434)
T ss_dssp BTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEEC
T ss_pred cccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 99999999999999999999999999999999999999999999874333347789999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
|||||++||++|.++|.++|+.. +++++++|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 328 Hgtgt~~~D~~E~~al~~~fg~~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~- 401 (434)
T 2gp6_A 328 HATGTQVGDLAEGRAINNALGGN-----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD- 401 (434)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTC-----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCE-
T ss_pred eCCcCccchHHHHHHHHHHhccC-----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc-
Confidence 99999999999999999999743 489999999999999999999999999999999999999999999998764
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++| .+|+++||||||||+|+|+||++|
T Consensus 402 ---~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 402 ---VVAGEPRPG-----NYRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp ---ECCSSCCCS-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred ---ccCCCccCC-----CCCEEEEeCCcCCCeeEEEEEEeC
Confidence 566666666 358899999999999999999975
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-77 Score=695.62 Aligned_cols=402 Identities=23% Similarity=0.346 Sum_probs=354.3
Q ss_pred cEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccc-cccCCc--CCCCCccceeeeccC---CCCCCCCccC
Q psy612 464 LIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPI--KSSNKINSKWYGSIP---GIDEFDPLFF 537 (1005)
Q Consensus 464 ~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~-~~~~~~--~~~~~~~~~~~g~~~---~~~~FD~~~f 537 (1005)
+||||||||++|++.++++||++|++|+++++++| ||++.. ++++.. ....+.+++++|+++ +++.||+.||
T Consensus 2 ~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~ 79 (431)
T 2ix4_A 2 RVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLT--LDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW 79 (431)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--GGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH
T ss_pred cEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCC--hhhhhccccccccccccccCcccceeEEeccccccccCChhhc
Confidence 69999999999999999999999999999999998 455321 111110 012345678899998 6889999987
Q ss_pred CCChhhhccCCHHHHHHHHHHHHHHHhcCC-CCCCCCCCceEEEEeeccCCcc-------------ccccccccccccch
Q psy612 538 EISPLEAERMDPRQRHLLQESWLALEDAGY-GPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHN 603 (1005)
Q Consensus 538 ~is~~ea~~mdpq~rl~L~~a~~AledAG~-~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~ 603 (1005)
++++ .|||+++++++++|+||+|||+ +++++++.++|||+|+..+.+. .....++.+++...
T Consensus 80 -~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 155 (431)
T 2ix4_A 80 -LNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILV 155 (431)
T ss_dssp -SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCT
T ss_pred -CChh---hCCHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchh
Confidence 8876 8999999999999999999999 8888888899999998766421 11234455566667
Q ss_pred hHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC------CCC
Q psy612 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGK 677 (1005)
Q Consensus 604 ~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~------~g~ 677 (1005)
++++++|++.||++||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++++ ++.
T Consensus 156 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 235 (431)
T 2ix4_A 156 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEA 235 (431)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGS
T ss_pred HHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccc
Confidence 88999999999999999999999999999999999999999999999999999999999899999999985 789
Q ss_pred CcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCC
Q psy612 678 CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPED 755 (1005)
Q Consensus 678 ~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p--~~~~q~~~i~~al~~agi~~~~ 755 (1005)
|+|||.+++|+++|||++++||+++++|+++|++||++|+|+++++||++ ++.| +..+|.++|++||++||++|+|
T Consensus 236 ~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~--~~~p~~~~~~~~~ai~~al~~agl~~~d 313 (431)
T 2ix4_A 236 SRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHH--ITQPPEDGKGAVLAMTRALRQSGLCPNQ 313 (431)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--SSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCC--CCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999999986 4555 7789999999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccc
Q psy612 756 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 835 (1005)
Q Consensus 756 I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~ 835 (1005)
|+|||+|||||++||++|..+|.++|+.... ..+++|+++|+++||+++|||+++++|++++|++++|||++||++|||
T Consensus 314 Id~ve~HgtgT~~~D~~E~~al~~~~~~~~~-~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p 392 (431)
T 2ix4_A 314 IDYVNAHATSTPIGDAVEARAIKTVFSEHAT-SGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDP 392 (431)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHTHHHH-TSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCT
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHHccccc-CCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence 9999999999999999999999999975421 234899999999999999999999999999999999999999999999
Q ss_pred ccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 836 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 836 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
.++++ +++.+.++|+ .+|++++|||||||+|+|+||++|
T Consensus 393 ~~~~~----~v~~~~~~~~----~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 393 IFDKR----FMPLTTSKKM----LVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp TCCSS----SCCCSSCEEC----CCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCcc----cCCccccccC----CCCEEEEecccCCCeeEEEEEeeC
Confidence 98775 3566777774 358999999999999999999975
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-76 Score=684.37 Aligned_cols=387 Identities=22% Similarity=0.290 Sum_probs=347.2
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
..++||||||+|++|++.++++||++|.+|+++++++| ||+.+. ...+++++|++++ |+.|| |+
T Consensus 10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~~~~----d~~~~-~~ 73 (416)
T 2wge_A 10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALE--DEFVTK---------WDLAVKIGGHLKD----PVDSH-MG 73 (416)
T ss_dssp SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECC--CHHHHH---------HTCSCCEEBCCSS----CGGGG-CC
T ss_pred CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCC--cccccc---------ccCCccEEEEeCC----chhhh-CC
Confidence 45689999999999999999999999999999999998 565221 1234578899875 88888 99
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHH
Q psy612 541 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 541 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 607 (1005)
++|++.||||+|++++++|+||+|||+ ++++..++|||+|+..+++.. ....++.+++...++++
T Consensus 74 ~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 151 (416)
T 2wge_A 74 RLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAA 151 (416)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHH
Confidence 999999999999999999999999999 567789999999998766521 12344555666778899
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-----CCCCCcCCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFD 682 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd 682 (1005)
++|++.||++||+++|+++|||+++||++|+++|++|+||++||||++.++.+..+..|...++++ +++.|+|||
T Consensus 152 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd 231 (416)
T 2wge_A 152 AVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFD 231 (416)
T ss_dssp HHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTB
T ss_pred HHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999998899999999998 789999999
Q ss_pred CCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy612 683 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 683 ~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p--~~~~q~~~i~~al~~agi~~~~I~yve 760 (1005)
.++||+++|||++++|||++++|+++|++||++|+|+++++||++ ++.| ++.+|.++|+++|+++|++|+||+|||
T Consensus 232 ~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~--~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 309 (416)
T 2wge_A 232 KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFH--MVAPAADGVRAGRAMTRSLELAGLSPADIDHVN 309 (416)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC--SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCC--ccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999999999999999999999999999999999999999986 4555 778999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
+|||||++||++|..++..+ +.. .++++++|+++||+++|||+++++|++++|+|++|||++||++|||.++++
T Consensus 310 ~HgtgT~~gD~~E~~al~~~-~~~-----~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~ 383 (416)
T 2wge_A 310 AHGTATPIGDAAEANAIRVA-GCD-----QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLD 383 (416)
T ss_dssp CCCCCCHHHHHHHHHHHHHT-TCT-----TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCE
T ss_pred ECCCCCcCCCHHHHHHHHHh-ccC-----CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999999999999988 421 379999999999999999999999999999999999999999999998764
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+++.+.++| .+|+++||||||||+|+|+||++|
T Consensus 384 ----~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 384 ----VVAGEPRYG-----DYRYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp ----ECCSSCEEC-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred ----cCCCCCccC-----CCCEEEEeCcccCceeEEEEEEeC
Confidence 455554443 468999999999999999999975
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-76 Score=687.10 Aligned_cols=389 Identities=25% Similarity=0.370 Sum_probs=351.5
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++||||||+|++|++.++++||++|.+|++++++++ ||+.. ..+.+++|++ .||+.|| |+++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~--~~~~~-----------~~~~~~~~~~----~fd~~~~-~~~~ 63 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDAS-----------ALPVRIAAEV----DVDPGAY-LDRK 63 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCT-----------TSSCCEEECC----CCCGGGT-SCHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeecc--ccCcc-----------cCccceEEEE----ccChhhc-CCHH
Confidence 469999999999999999999999999999999986 56532 2345677887 3999987 9999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
|++.|||+++++++++|+||+|||+++++++..++|||+|+..+++.. ...+++.+++...++++++
T Consensus 64 ~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (408)
T 1j3n_A 64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH 143 (408)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999988765421 1234445566667889999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~ 684 (1005)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|...+++++ ++.|+|||.+
T Consensus 144 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~ 223 (408)
T 1j3n_A 144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS 223 (408)
T ss_dssp HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCC
Confidence 99999999999999999999999999999999999999999999999899999999999999996 5789999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 764 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgt 764 (1005)
+||+++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||++||++|+||+|||+|||
T Consensus 224 ~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt 303 (408)
T 1j3n_A 224 RDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGT 303 (408)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 99999999999999999999999999999999999999999875555568899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCe
Q psy612 765 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 844 (1005)
Q Consensus 765 gt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~ 844 (1005)
||++||++|+.++.++|+... .+++++|+|+++||+++|||++++||++++|+|++|||++||++|||.++++.
T Consensus 304 gt~~gD~~E~~al~~~~g~~~---~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~--- 377 (408)
T 1j3n_A 304 STPVGDRAEVLAIKRVFGDHA---KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDF--- 377 (408)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBC---
T ss_pred cCcccCHHHHHHHHHHhcCcC---CCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc---
Confidence 999999999999999997532 24899999999999999999999999999999999999999999999987653
Q ss_pred eeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 845 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 845 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
++ +.++|+ +|++++|||||||+|+|+||++|
T Consensus 378 -v~-~~~~~~-----~~~a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 378 -VP-EPREAK-----VDYALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp -CS-SCEECC-----CSEEEEEEECTTSEEEEEEEECC
T ss_pred -CC-CCcCCC-----CCEEEEecccCCcceEEEEEecC
Confidence 33 566673 58899999999999999999974
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-76 Score=686.35 Aligned_cols=388 Identities=24% Similarity=0.335 Sum_probs=351.7
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
.++|+||||+|++|++.++++||++|.+|+++++++| ||+... .+.+++|+++ .||+.+| +++
T Consensus 22 m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~---~fd~~~~-~~~ 84 (430)
T 1ox0_A 22 LNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT--KFDHSD-----------FDVHNAAEIQ---DFPFDKY-FVK 84 (430)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECC--SSCCTT-----------SSCCEEECCS---SCCHHHH-CCG
T ss_pred CCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCC--cccccC-----------Cccceeeecc---CCChhhc-CCH
Confidence 3679999999999999999999999999999999998 565332 2456777765 5999887 999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ 608 (1005)
++++.|||++|++++++|+||+|||++++++++.++|||+|+..+++. ...++++.+++...+++++
T Consensus 85 ~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 164 (430)
T 1ox0_A 85 KDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASG 164 (430)
T ss_dssp GGGGTCCHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHH
Confidence 999999999999999999999999999999999999999998776531 1123445566677789999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC----CCCCCcCCCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDER 684 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~ 684 (1005)
+|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..+++++ |++.|+|||.+
T Consensus 165 ~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~ 244 (430)
T 1ox0_A 165 NVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKD 244 (430)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTT
T ss_pred HHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 88999999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p--~~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
+||+++|||++++|||++++|+++|++||++|+|+++++||++ ++.| ++.+|.++|++||++||++|+||+|||+|
T Consensus 245 ~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H 322 (430)
T 1ox0_A 245 RNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYH--MTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH 322 (430)
T ss_dssp CCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECC
T ss_pred CCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCC--CCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEe
Confidence 9999999999999999999999999999999999999999986 4555 77899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 842 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~ 842 (1005)
||||+++|++|..++.++|+. .++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 323 gtgt~~~D~~E~~al~~~~g~------~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~-- 394 (430)
T 1ox0_A 323 GTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN-- 394 (430)
T ss_dssp CCSCHHHHHHHHHHHHHHHCS------SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE--
T ss_pred CCcCcccCHHHHHHHHHHhCC------CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc--
Confidence 999999999999999999975 379999999999999999999999999999999999999999999998754
Q ss_pred CeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 843 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 843 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
+++.+.++| .+|++++|||||||+|+|+||++|.
T Consensus 395 --~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 395 --VVYGQGLEK-----EIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp --ECBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred --cCCCCCcCC-----CCCEEEEeCccCCCceEEEEEeecC
Confidence 455555555 3589999999999999999999874
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-75 Score=683.30 Aligned_cols=396 Identities=24% Similarity=0.383 Sum_probs=356.3
Q ss_pred CcCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccC----CCCCCCCcc
Q psy612 461 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIP----GIDEFDPLF 536 (1005)
Q Consensus 461 ~~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~FD~~~ 536 (1005)
..++|||||||+++|.+.++++||++|.+|+++|+++| ||++..+ +.+++|+++ +++.||+.|
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~fd~~~ 74 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVT--EFEVDDL-----------ACQIACRIPVGDGTNGTFNPDL 74 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCCBSSSSTTCBCGGG
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCC--ccccccC-----------cCceeeEecccccccccCChhh
Confidence 45789999999999999999999999999999999997 4554332 345667775 566899999
Q ss_pred CCCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEeeccCCcc-------------ccccccccccccc
Q psy612 537 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTH 602 (1005)
Q Consensus 537 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~ 602 (1005)
| |+++|++.||||+|++++++|+||+||||++++ +++.++|||+|++.+.+. ...++++..++..
T Consensus 75 ~-i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (428)
T 3kzu_A 75 H-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL 153 (428)
T ss_dssp T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC
T ss_pred c-CCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch
Confidence 9 999999999999999999999999999999988 888899999998765421 1234455677788
Q ss_pred hhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC------C
Q psy612 603 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD------G 676 (1005)
Q Consensus 603 ~~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~------g 676 (1005)
.+++++|||+.||++||+++|+++|||+++||++|+++|++|+||++||||++..++|..+..|...++++++ +
T Consensus 154 ~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 233 (428)
T 3kzu_A 154 INLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTA 233 (428)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred hhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999965 6
Q ss_pred CCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy612 677 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 756 (1005)
Q Consensus 677 ~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I 756 (1005)
+|+|||.++|||++|||++++|||++++|+++|++||++|+|+++++||++.....|++.+|.+++++||++||++|+||
T Consensus 234 ~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 313 (428)
T 3kzu_A 234 ASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEI 313 (428)
T ss_dssp TCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHe
Confidence 89999999999999999999999999999999999999999999999998755556677899999999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccc
Q psy612 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 836 (1005)
Q Consensus 757 ~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~ 836 (1005)
+|||+||||| ++|++|++++.++|+... .+++++++|+++||+++|+|+++++|++++|++++|||++||++|||.
T Consensus 314 d~ve~HgtgT-~~d~~e~~al~~~~g~~~---~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 389 (428)
T 3kzu_A 314 DYINAHGTST-MADTIELGAVERVVGEAA---AKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQ 389 (428)
T ss_dssp CEEECCCCSS-TTHHHHHHHHHHHHGGGG---GGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSC
T ss_pred eEEEecCCcc-hhhHHHHHHHHHHhccCC---CceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCC
Confidence 9999999999 999999999999998643 358999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 837 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 837 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
++++. ++.+.++| ++|+++||||||||+|+|+||++|+
T Consensus 390 ~~~~~----~~~~~~~~-----~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 390 TRIDL----VPHKPRER-----KIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CSSBC----CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCccc----CCCCCcCC-----CCCEEEEeCcccChhhEEEEEeecC
Confidence 87763 34444444 3689999999999999999999874
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-75 Score=684.67 Aligned_cols=397 Identities=23% Similarity=0.319 Sum_probs=357.4
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCC-----CCCCCcc
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGI-----DEFDPLF 536 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~FD~~~ 536 (1005)
.++||||||||++|++.++++||++|.+|+++++++| ||+... .+.+++|+++++ +.||+.|
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~--~~~~~~-----------~~~~~~g~v~~~~~~~~~~fd~~~ 89 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLG--DDIAGE-----------LSAKVGGTVQDVAEDPEGGFDPER 89 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--HHHHTT-----------SSCCEEECCCCTTTCTTTCCCGGG
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCC--cccccc-----------ccCccceEccccccccccccchhh
Confidence 3689999999999999999999999999999999997 454332 235678888754 4899999
Q ss_pred CCCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEeeccCCcc-------------ccccccccccccc
Q psy612 537 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTH 602 (1005)
Q Consensus 537 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~-~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~ 602 (1005)
| |++++++.|||++|++++++|+||+|||++++++ ++.++|||+|+..+.+. .....++.+++..
T Consensus 90 ~-i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (451)
T 4ddo_A 90 S-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFL 168 (451)
T ss_dssp T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHC
T ss_pred h-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccc
Confidence 9 9999999999999999999999999999999998 88899999998765421 1123445566677
Q ss_pred hhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC------C
Q psy612 603 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD------G 676 (1005)
Q Consensus 603 ~~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~------g 676 (1005)
.++++++||+.||++||+++|+++|||+++||++|+++|++|+||++||||++..++|..+..+...++++++ +
T Consensus 169 ~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 248 (451)
T 4ddo_A 169 SNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVR 248 (451)
T ss_dssp TTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred cchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccc
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999976 7
Q ss_pred CCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy612 677 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 756 (1005)
Q Consensus 677 ~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I 756 (1005)
.|+|||.++||+++|||++++||+++++|+++|++||++|+|+++++||+......|+..+|.++|++||++||++|+||
T Consensus 249 ~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dI 328 (451)
T 4ddo_A 249 ASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQV 328 (451)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred cccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999998877777788999999999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccc
Q psy612 757 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 836 (1005)
Q Consensus 757 ~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~ 836 (1005)
+|||+|||||++||++|..+|.++|+. ..+++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.
T Consensus 329 d~ve~Hgtgt~~~d~~E~~al~~~~~~----~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 404 (451)
T 4ddo_A 329 DYVNAHATSTPVGDAGEIEALKTVFGV----GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPA 404 (451)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCS----SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGG
T ss_pred CEEEecCCcCcccCHHHHHHHHHHhCC----CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 999999999999999999999999986 2358999999999999999999999999999999999999999999998
Q ss_pred c-ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccccc
Q psy612 837 I-ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIST 885 (1005)
Q Consensus 837 i-~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~ 885 (1005)
+ +++ +++.+.++| +.|++++|||||||+|+|+||++|++.
T Consensus 405 ~~~~~----~~~~~~~~~-----~~~~a~~~sfgfgG~na~~vl~~~~~~ 445 (451)
T 4ddo_A 405 ADGLD----LIGPAARHV-----PVEIALSNGFGFGGVNASVLFRRYPSD 445 (451)
T ss_dssp GTTSE----ECCSSCEEC-----CCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred ccccc----ccCCCCCCC-----CcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence 7 443 455555555 358999999999999999999998654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=382.26 Aligned_cols=299 Identities=14% Similarity=0.172 Sum_probs=260.1
Q ss_pred CCCceEEEEecCCCCCcChHHHHHHHHHHhcC-CCceEEEEecCceeEEEeeeeecccc--ccCCccccCCCEEEEECCh
Q psy612 1 MPETQISIVFAEKITNFNIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIILK--DFKNSYIKQGGTYLITGGT 77 (1005)
Q Consensus 1 lp~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~-~~~~~v~~r~g~~~r~~~~l~~~~~~--~~~~~~~~~~~~~lITGg~ 77 (1005)
+|++.+++||+|.... +.....|+.|+.. ..+.+|+||+| .||++++++.+.. ......++++|+||||||+
T Consensus 186 ~p~~~~~~vDl~~~~~---~~~~~~l~~~l~~~~~e~~va~R~~--~~~~~rl~~~~~~~~~~~~~~~~~~~~vLITGgs 260 (525)
T 3qp9_A 186 HPERWGGLIDLPSDAD---RAALDRMTTVLAGGTGEDQVAVRAS--GLLARRLVRASLPAHGTASPWWQADGTVLVTGAE 260 (525)
T ss_dssp STTTEEEEEEECSSCC---HHHHHHHHHHHTTCSCCSEEEEETT--EEEEEEEEECCC---CCCCCSSCTTSEEEESSTT
T ss_pred CCCceEEEEEcCCCCC---hhHHHHHHHHHhcCCCCCEEEEECC--cEEEEEEEEcCCcccCCccceecCCCEEEEECCC
Confidence 5899999999987643 3677889999986 45789999999 9999999998766 3344578999999999999
Q ss_pred hHHHHHHHHHHHHcCCcEEEEe-cCCC--------------chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 78 GRLGMLFSDYLINKYSTNLILS-GRSK--------------LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 78 gGIG~aiA~~La~~Ga~~vil~-~r~~--------------~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
||||+++|++|+++|+++++++ +|+. ..+++.+++++.|.++.+++||++|.++++++++++. +
T Consensus 261 gGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~-~ 339 (525)
T 3qp9_A 261 EPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVS-D 339 (525)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTSC-T
T ss_pred CcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHHH-h
Confidence 9999999999999999989988 8874 2356777788889999999999999999999999998 7
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCCChhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+|+||+||||||+.. +..+.+++.++|++++++|+.|+++|++++.+.|+ +.. .++||+|||+++.+|.+|+++|
T Consensus 340 ~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~---~~~~~~~iV~~SS~a~~~g~~g~~~Y 415 (525)
T 3qp9_A 340 AHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAA---AGGRPPVLVLFSSVAAIWGGAGQGAY 415 (525)
T ss_dssp TSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-------CCCEEEEEEEGGGTTCCTTCHHH
T ss_pred cCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccc---cCCCCCEEEEECCHHHcCCCCCCHHH
Confidence 999999999999988 88999999999999999999999999999988753 223 7999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
+++|+|+++|+++++..|+ ++++|+||.| ++||..+. .....+...|+.+|+++++++.|..+|..+.+++
T Consensus 416 aaaKa~l~~lA~~~~~~gi------~v~sI~pG~~-~tgm~~~~--~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~~~v 486 (525)
T 3qp9_A 416 AAGTAFLDALAGQHRADGP------TVTSVAWSPW-EGSRVTEG--ATGERLRRLGLRPLAPATALTALDTALGHGDTAV 486 (525)
T ss_dssp HHHHHHHHHHHTSCCSSCC------EEEEEEECCB-TTSGGGSS--HHHHHHHHTTBCCBCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHHhCCC------CEEEEECCcc-ccccccch--hhHHHHHhcCCCCCCHHHHHHHHHHHHhCCCCeE
Confidence 9999999999988776665 9999999999 88997532 2334467789999999999999999999999999
Q ss_pred hhhchhhHHHHHHHhhc
Q psy612 302 LVLSGELEKLNQIINNI 318 (1005)
Q Consensus 302 ~v~~~~~~~~~~~~~~~ 318 (1005)
++...||+++...+...
T Consensus 487 ~v~~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 487 TIADVDWSSFAPGFTTA 503 (525)
T ss_dssp EECCBCHHHHHHHHHSS
T ss_pred EEEeCCHHHHHhhcccc
Confidence 99999999988877644
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=363.93 Aligned_cols=294 Identities=16% Similarity=0.227 Sum_probs=254.1
Q ss_pred CCCceEEEEecCCCCCcChHHHHHHHHHHhcCC-CceEEEEecCceeEEEeeeeeccccccCCccccCC--CEEEEECCh
Q psy612 1 MPETQISIVFAEKITNFNIKNWINILFKELQEP-KLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQG--GTYLITGGT 77 (1005)
Q Consensus 1 lp~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~~-~~~~v~~r~g~~~r~~~~l~~~~~~~~~~~~~~~~--~~~lITGg~ 77 (1005)
.|+..+++||+|.... +.....|..|+... .+++++||++ .||++|+.+.+... ....++++ |+||||||+
T Consensus 175 ~P~~~~~lvDl~~~~~---~~~~~~l~~~l~~~~~e~~va~R~~--~~~~~rl~~~~~~~-~~~~~~~~~~~~vLITGgs 248 (496)
T 3mje_A 175 HPDRWGGLIDLPETVD---TRAAARLTGLLADAGGEDQLAIRGS--GVLARRLAHAAPAV-PGSGKRPPVHGSVLVTGGT 248 (496)
T ss_dssp SGGGEEEEEEECSSCC---HHHHHHHHHHHHCCTTCCEEEEETT--EEEEEEEEECCCCC-TTTTCCCCCCSEEEEETCS
T ss_pred CCCCeEEEEeCCCCcC---hhHHHHHHHHHhcCCCCCEEEEECC--eEEEEEEeeccccc-CCcCCCCCCCCEEEEECCC
Confidence 4889999999986544 35667888888864 5889999999 99999999886654 33456666 999999999
Q ss_pred hHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q psy612 78 GRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIA 153 (1005)
Q Consensus 78 gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~A 153 (1005)
||||+++|++|+++|+++|++++|+. ..+++.+++++.|.++.++.||++|.++++++++++.+. ++||+|||||
T Consensus 249 gGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~A 327 (496)
T 3mje_A 249 GGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-APLTAVFHSA 327 (496)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECC
T ss_pred CchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECC
Confidence 99999999999999998899888863 345677888888999999999999999999999998777 7999999999
Q ss_pred ccc-CccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHH
Q psy612 154 GIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 232 (1005)
Q Consensus 154 G~~-~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la 232 (1005)
|+. . +.++.+++.++|++++++|+.|+++|++++ .....++||+|||+++.+|.+||++|+++|+++++|+
T Consensus 328 Gv~~~-~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~-------~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala 399 (496)
T 3mje_A 328 GVAHD-DAPVADLTLGQLDALMRAKLTAARHLHELT-------ADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALA 399 (496)
T ss_dssp CCCCS-CCCTTTCCHHHHHHHHHTTHHHHHHHHHHH-------TTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred cccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHh-------hccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHH
Confidence 998 5 788999999999999999999999999984 4457899999999999999999999999999999999
Q ss_pred HHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhhchhhHHHH
Q psy612 233 KYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLN 312 (1005)
Q Consensus 233 ~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~ 312 (1005)
++++..|+ ++++|+||.|.+.||..... ....+.+.|+.+++++++++.|.+++..+..+.++...||+++.
T Consensus 400 ~~~~~~Gi------~v~sV~pG~w~~~gm~~~~~--~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~~~~~v~~ldw~~~~ 471 (496)
T 3mje_A 400 EHRRSLGL------TASSVAWGTWGEVGMATDPE--VHDRLVRQGVLAMEPEHALGALDQMLENDDTAAAITLMDWEMFA 471 (496)
T ss_dssp HHHHHTTC------CCEEEEECEESSSCC--------CHHHHHTTEEEECHHHHHHHHHHHHHHTCSEEEECEECHHHHH
T ss_pred HHHHhcCC------eEEEEECCcccCCccccChH--HHHHHHhcCCCCCCHHHHHHHHHHHHcCCCceEEEEEccHHHHH
Confidence 99998877 89999999999999975422 22346678899999999999999999999999999999999987
Q ss_pred HHHhh
Q psy612 313 QIINN 317 (1005)
Q Consensus 313 ~~~~~ 317 (1005)
..+..
T Consensus 472 ~~~~~ 476 (496)
T 3mje_A 472 PAFTA 476 (496)
T ss_dssp HHHTS
T ss_pred hhhcc
Confidence 76544
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=347.09 Aligned_cols=293 Identities=17% Similarity=0.188 Sum_probs=246.3
Q ss_pred CCCceEEEEecCCCCCcChHHHHHHHHHHhcCC-CceEEEEecCceeEEEeeeeeccccccCCccccCCCEEEEECChhH
Q psy612 1 MPETQISIVFAEKITNFNIKNWINILFKELQEP-KLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGR 79 (1005)
Q Consensus 1 lp~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~~-~~~~v~~r~g~~~r~~~~l~~~~~~~~~~~~~~~~~~~lITGg~gG 79 (1005)
.|++.+++||+|..... +.+..|+.|+... .+.+++||++ .||++|+.+.+..... ..++++++||||||+||
T Consensus 164 ~p~~~~~~vdl~~~~~~---~~~~~l~~~l~~~~~~~~va~r~~--~~~~~rl~~~~~~~~~-~~~~~~~~vLITGgtGg 237 (486)
T 2fr1_A 164 NPAVWGGLVDVPAGSVA---ELARHLAAVVSGGAGEDQLALRAD--GVYGRRWVRAAAPATD-DEWKPTGTVLVTGGTGG 237 (486)
T ss_dssp CGGGEEEEEEECTTCCT---THHHHHHHHHTCSSCCCEEEEETT--EEEEEEEEECCCCCSS-CCCCCCSEEEEETTTSH
T ss_pred CCCceEEEEECCCCCCH---HHHHHHHHHHhcCCCCCEEEEECC--cEEEEEEEecCCCCCC-CCcCCCCEEEEECCCCH
Confidence 48899999999865542 4467888888753 5789999999 9999999986654433 36889999999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCc----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcCcc
Q psy612 80 LGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGI 155 (1005)
Q Consensus 80 IG~aiA~~La~~Ga~~vil~~r~~~----~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~ 155 (1005)
||++++++|+++|+++|++++|+.. .+++.++++..|.++.++.||++|.+++.++++.+ .++++||+||||||+
T Consensus 238 IG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 238 VGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAAT 316 (486)
T ss_dssp HHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCcc
Confidence 9999999999999988888888753 35667778888999999999999999999999998 667999999999999
Q ss_pred cCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHH
Q psy612 156 SGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 156 ~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~ 235 (1005)
.. +..+.+++.++|++++++|+.|+++|++++ ...+.++||+|||+++.+|.+++++|+++|+++++|++++
T Consensus 317 ~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~-------~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~ 388 (486)
T 2fr1_A 317 LD-DGTVDTLTGERIERASRAKVLGARNLHELT-------RELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR 388 (486)
T ss_dssp CC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH-------TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH
T ss_pred CC-CCccccCCHHHHHHHHHHHHHHHHHHHHHh-------CcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 88 788999999999999999999999999984 4457899999999999999999999999999999999999
Q ss_pred HhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhhhhhchhhHHHHHHH
Q psy612 236 NNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQII 315 (1005)
Q Consensus 236 ~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~ 315 (1005)
+..|+ ++++|+||.|.+.||..... ...+...|+.+++++++++.+..++..+.+++++...+|.++...+
T Consensus 389 ~~~gi------~v~~i~pG~~~~~gm~~~~~---~~~~~~~g~~~i~~e~~a~~l~~~l~~~~~~~~v~~~d~~~~~~~~ 459 (486)
T 2fr1_A 389 RSDGL------PATAVAWGTWAGSGMAEGPV---ADRFRRHGVIEMPPETACRALQNALDRAEVCPIVIDVRWDRFLLAY 459 (486)
T ss_dssp HHTTC------CCEEEEECCBC---------------CTTTTEECBCHHHHHHHHHHHHHTTCSSCEECEECHHHHHHHH
T ss_pred HhcCC------eEEEEECCeeCCCcccchhH---HHHHHhcCCCCCCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHhhhh
Confidence 88776 89999999999888864321 1234456788999999999999999998888888999999887765
Q ss_pred hh
Q psy612 316 NN 317 (1005)
Q Consensus 316 ~~ 317 (1005)
..
T Consensus 460 ~~ 461 (486)
T 2fr1_A 460 TA 461 (486)
T ss_dssp TS
T ss_pred cc
Confidence 43
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=333.98 Aligned_cols=291 Identities=17% Similarity=0.247 Sum_probs=245.9
Q ss_pred CCCceEEEEecCCCCCc-------------------ChHHHHHHHHHHhcC-CCceEEEEecCceeEEEeeeeecccccc
Q psy612 1 MPETQISIVFAEKITNF-------------------NIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIILKDF 60 (1005)
Q Consensus 1 lp~~~v~~vd~~~~~~~-------------------~~~~~~~~l~~E~~~-~~~~~v~~r~g~~~r~~~~l~~~~~~~~ 60 (1005)
.|+..+++||+|..... ........|..++.. ..+++++||++ .||++|+.+.+...
T Consensus 176 ~p~~~~~~vDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~e~~va~r~~--~~~~~rl~~~~~~~- 252 (511)
T 2z5l_A 176 LPDIWGGLIDLPETAELTRTPETSQPPQTPERLPQTPNRRALELAAAVLAGRDGEDQVAVRAS--GIYGRRVSRAAAAG- 252 (511)
T ss_dssp CTTTEEEEEEECC------------------------CHHHHHHHHHHHTCSSCCCEEEEETT--EEEEEEEEECCCCT-
T ss_pred CCCceEEEEECCCcccccccccccccccccccccccccHHHHHHHHHHHhcCCCCCEEEEECC--cEEEEEEEEeccCC-
Confidence 58999999999865420 023455677788875 46789999999 99999999865432
Q ss_pred CCccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy612 61 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 61 ~~~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~----~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
...++++|+||||||+||||++++++|+++|+++|++++|+.. .+++.++++..|.++.++.||++|.+++++++
T Consensus 253 -~~~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 331 (511)
T 2z5l_A 253 -AASWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALV 331 (511)
T ss_dssp -TCCCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHH
T ss_pred -CCCcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence 2458899999999999999999999999999988888888742 35677788888899999999999999999988
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCC
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAILGD 215 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~-~~~~iV~~SSia~~~g~ 215 (1005)
+. +++|+||||||+.. +..+.+++.++|++++++|+.|+++|++++ ... +.++||+|||+++.+|.
T Consensus 332 ~~-----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~-------~~~~~~~~~V~~SS~a~~~g~ 398 (511)
T 2z5l_A 332 TA-----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLT-------ADIKGLDAFVLFSSVTGTWGN 398 (511)
T ss_dssp HH-----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHT-------SSCTTCCCEEEEEEGGGTTCC
T ss_pred hc-----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHH-------hhccCCCEEEEEeCHHhcCCC
Confidence 76 79999999999988 888999999999999999999999999884 333 67899999999999999
Q ss_pred CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|+++|+++++|+++++..|+ ++++|+||.|.++||..... ...+...|+.+++++++++.+..++.
T Consensus 399 ~g~~~YaaaKa~ld~la~~~~~~gi------~v~sv~pG~~~~tgm~~~~~---~~~~~~~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 399 AGQGAYAAANAALDALAERRRAAGL------PATSVAWGLWGGGGMAAGAG---EESLSRRGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHTTTC------CCEEEEECCBCSTTCCCCHH---HHHHHHHTBCCBCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCC------cEEEEECCcccCCccccccc---HHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999887776 89999999998889975421 12345678889999999999999999
Q ss_pred ccchhhhhhchhhHHHHHHHhh
Q psy612 296 QDKIQYLVLSGELEKLNQIINN 317 (1005)
Q Consensus 296 ~~~~~~~v~~~~~~~~~~~~~~ 317 (1005)
.+.+++++...+|.++...+..
T Consensus 470 ~~~~~v~v~~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 470 RNDVCVTVVDVDWERFAPATNA 491 (511)
T ss_dssp HTCSEEEECCBCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHhhhcc
Confidence 9988888899999988766543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=403.27 Aligned_cols=312 Identities=19% Similarity=0.251 Sum_probs=178.2
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-h---HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-N---SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 138 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~---~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 138 (1005)
..|+++|+||||||+||||+++|++|+++|+++|++++|+.. . .+..+++++.|.++.++.|||+|.+++++++++
T Consensus 1879 ~~~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A 1879 TFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHH
Confidence 457899999999999999999999999999998888888743 2 345566667788999999999999999999999
Q ss_pred HHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 139 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 139 i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
+. ++|+||+||||||+.. +.++.+++.++|++++++|+.|+++|++++.+.|+ ..++||++||+++..|+++|
T Consensus 1959 ~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~-----~~g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A 1959 AT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACP-----ELDYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp HH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCT-----TCCEEEEECCHHHHTTCTTC
T ss_pred HH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCEEEEecchhhcCCCCCc
Confidence 86 4899999999999987 88899999999999999999999999999888742 35899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++|+++|+++++|+++|+.+|+ ++++++|+.|.++||...... ...+...|..++...+++..++.++..+.
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~Gl------~~~a~~~g~~~~~G~~~~~~~--~~~~~~~g~~~~~~~~~l~~l~~~~~~~~ 2103 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHDGL------PGLAVQWGAIGDVGVVLETMG--TNDTVIGGTLPQRIASCLEVLDLFLSQPH 2103 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS------CCCEEEECCBCTTSTTTC------CCCCTTSEECBCHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHCCC------cEEEEEccCcCCcchhhhcch--hHHHHhhcccCccHHHHHHHHHHHhhCCC
Confidence 9999999999999999999998 899999999999999876543 11233457778888999999998876653
Q ss_pred hhhhhhchhhHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHhCCC-CcccccCCchhhcCCchHHHHHHHH
Q psy612 299 IQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSR 377 (1005)
Q Consensus 299 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~L~~~-~~~i~~~~~l~elG~DSL~a~el~~ 377 (1005)
+.+..+. +. ... ... ......+..|.++|+++|+++ .++|+++++|++||+|||+++||++
T Consensus 2104 p~~~~~~--~~----------~~~-~~~-----~~~~~~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~ 2165 (2512)
T 2vz8_A 2104 PVLSSFV--LA----------EKK-AAA-----PRDGSSQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQ 2165 (2512)
T ss_dssp SEEEEEE--EC----------C----------------------------------------------------------
T ss_pred cccchhh--hc----------ccc-ccc-----ccccchHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHH
Confidence 3211111 00 000 000 000112356889999999996 5789999999999999999999999
Q ss_pred HHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 378 ILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 378 ~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
||+++|+++|+..++++ +|+.+|++++...
T Consensus 2166 ~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2166 ILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------
T ss_pred HHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 99999999999999998 9999999887543
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=329.82 Aligned_cols=270 Identities=17% Similarity=0.196 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCccccccc
Q psy612 550 RQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledA-G~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~ta 626 (1005)
.++|+++++++||+|| |+++++++ +|++|+..+++. ....+++++++.||| +||+++|+++
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id----~v~~g~~~~~~~------------~~~~~a~~ia~~lgl~~~~p~~~v~~a 93 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLE------------QGWNIARMASLMTQIPHTSAAQTVSRL 93 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBT------------TTTTHHHHHHTTSSSCTTSEEEEEECG
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEeeccccC------------CCCcHHHHHHHHcCCCCCccEEEEccc
Confidence 4789999999999999 99877665 899997654432 124689999999999 9999999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHHH------------------HHH------HHc------------
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY------------------IAM------TSA------------ 669 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~~------------------~~~------~~~------------ 669 (1005)
|+|+++||++|+++|++|+||++||||++.+.. |... +.. .+.
T Consensus 94 CaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~ 173 (390)
T 1wdk_C 94 CGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAV 173 (390)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999999999999996532 2100 011 011
Q ss_pred ------------CCCC----C------CCCCcCCCCC---------------------CCCce-------ecCccEEEEE
Q psy612 670 ------------GMLS----P------DGKCYVFDER---------------------ANGLV-------PSEAVVAVVL 699 (1005)
Q Consensus 670 ------------~~ls----~------~g~~~pfd~~---------------------a~G~~-------~gEGa~~vvL 699 (1005)
|.+. | .+.|+|||.+ +|||+ ++||+++|||
T Consensus 174 ~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL 253 (390)
T 1wdk_C 174 RSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIV 253 (390)
T ss_dssp HHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEE
Confidence 1111 1 1334799999 79999 9999999999
Q ss_pred cccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHH
Q psy612 700 KRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD 779 (1005)
Q Consensus 700 k~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~ 779 (1005)
+++++|.++|++||++|+|++.++++. .|.+.++..++++||++||++|+||||||.|+++| +|..++.+
T Consensus 254 ~s~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~-----~~~~~~~~ 323 (390)
T 1wdk_C 254 MSAQRAKDLGLEPLAVIRSMAVAGVDP-----AIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA-----AQALPVLK 323 (390)
T ss_dssp EEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH-----HHHHHHHH
T ss_pred ecHHHHHHcCCCccEEEEEEEEeccCh-----hhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCH-----HHHHHHHH
Confidence 999999999999999999999987542 23456789999999999999999999999999987 47778888
Q ss_pred HhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccC
Q psy612 780 VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 859 (1005)
Q Consensus 780 ~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~ 859 (1005)
.|+-......++.+++.|.++||+.+|+|+.++++++++|+++ .
T Consensus 324 ~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~------------------------------------~ 367 (390)
T 1wdk_C 324 DLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN------------------------------------G 367 (390)
T ss_dssp HTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------------------------------------T
T ss_pred HcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc------------------------------------C
Confidence 8874310023467899999999999999999999999999985 1
Q ss_pred ccEEEEcccCCCCceEEEEEec
Q psy612 860 LRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 860 ~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.+++.+++.+.||.+..+|||.
T Consensus 368 ~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 368 GTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp CSEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEecccchheEEEEEEe
Confidence 2456676667789999999984
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=317.06 Aligned_cols=263 Identities=19% Similarity=0.180 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
++|+++++++||+|||+++++++ +|++|+..+++. ...+++++++.||+ +||+++|+++|+
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id----~v~~g~~~~~~~-------------~~~~a~~ia~~lgl~~~~p~~~v~~aCa 93 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS----EVIFGHVLAAGC-------------GQNPVRQASVGAGIPYSVPAWSCQMICG 93 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSCEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------CCHHHHHHHHHcCCCCCccEEEecCcCh
Confidence 68999999999999999987776 688887654321 12478999999999 899999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH-------------------------------HHHHH---------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-------------------------------YIAMT--------- 667 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~-------------------------------~~~~~--------- 667 (1005)
|++.||++|+++|++|+||++||||++.+.. |.. +....
T Consensus 94 Sg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~ 173 (397)
T 1wl4_A 94 SGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQV 173 (397)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCc
Confidence 9999999999999999999999999997542 110 00000
Q ss_pred --------------------HcCC------------------CCCCC------------CCcC-CCCCCCCce-------
Q psy612 668 --------------------SAGM------------------LSPDG------------KCYV-FDERANGLV------- 689 (1005)
Q Consensus 668 --------------------~~~~------------------ls~~g------------~~~p-fd~~a~G~~------- 689 (1005)
..|. +++|+ +||| ||.++||++
T Consensus 174 tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~ 253 (397)
T 1wl4_A 174 SREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASG 253 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCC
T ss_pred CHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCC
Confidence 0111 22444 5999 999999999
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||+++++|.++|++||++|+|++.+++. ..+.+.++..+++++|++||++|+||||||.|
T Consensus 254 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~------- 321 (397)
T 1wl4_A 254 INDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE-----PSIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN------- 321 (397)
T ss_dssp CEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC-------
T ss_pred ccchhheeeEecHHHHHHcCCCccEEEEEEEEeecC-----hhhccchHHHHHHHHHHHcCCCHHHCCEEEEe-------
Confidence 999999999999999999999999999999998732 12345688999999999999999999999977
Q ss_pred CHHHHH--HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 770 DPVEIN--ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 770 D~~E~~--al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
|+.|.. ++.+.|+-.. .++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 322 d~f~~~~l~~~~~lg~~~---~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------------------- 373 (397)
T 1wl4_A 322 EAFAAVSAAIVKELGLNP---EKVNIEGGAIALGHPLGASGCRILVTLLHTLERM------------------------- 373 (397)
T ss_dssp CSBHHHHHHHHHHHTCCG---GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred cccHHHHHHHHHHcCCCC---cCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc-------------------------
Confidence 555654 4778887432 3578999999999999999999999999999985
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++..+-||.+..+|||.
T Consensus 374 -----------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -----------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -----------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -----------CCCEEEEEEecccchheEEEEEe
Confidence 12567777777789999999985
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=311.58 Aligned_cols=263 Identities=15% Similarity=0.165 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taC 627 (1005)
.++|+++++++||+|||+++++++ ++++|...+.+. ...+++++++.+||+ ||+++|+++|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------~~~~a~~ia~~lgl~~~~p~~~v~~aC 89 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN----EVILGQVLPAGE-------------GQNPARQAAMKAGVPQEATAWGMNQLC 89 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------CcHHHHHHHHHcCCCCCceEEEecccc
Confidence 467999999999999999987776 677776543221 124789999999999 9999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH-------------------------------HHHH-----HHc-
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-------------------------------YIAM-----TSA- 669 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~-------------------------------~~~~-----~~~- 669 (1005)
+|++.||++|+++|++|+||++||||++.+.. |.. +... .+.
T Consensus 90 aSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 169 (392)
T 2vu1_A 90 GSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQ 169 (392)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999996432 110 0000 000
Q ss_pred -----------------------CCC----------CCCCCCcCCCCC--------------------CCCce-------
Q psy612 670 -----------------------GML----------SPDGKCYVFDER--------------------ANGLV------- 689 (1005)
Q Consensus 670 -----------------------~~l----------s~~g~~~pfd~~--------------------a~G~~------- 689 (1005)
|.+ +++| |+|||.+ +||++
T Consensus 170 ~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~ 248 (392)
T 2vu1_A 170 LSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG-DITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASG 248 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTC-CEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCC-ceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCC
Confidence 111 1123 8999998 88999
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||+++++|+++|++||++|+|++++++.. .+.+.++..++++||+++|++|+||||||.|
T Consensus 249 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~agl~~~dId~ie~~------- 316 (392)
T 2vu1_A 249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP-----KVMGTGPIPASRKALERAGWKIGDLDLVEAN------- 316 (392)
T ss_dssp CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC-------
T ss_pred ccChhheeeEecHHHHHhcCCCccEEEEEEEEeecCh-----hhcchhHHHHHHHHHHHcCCCHHHcCEEEec-------
Confidence 9999999999999999999999999999999987431 2345678999999999999999999999988
Q ss_pred CHHHHHHH--HHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 770 DPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 770 D~~E~~al--~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
|+.|..+| .+.|+-. ..++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 317 d~f~~~~l~~~~~lg~~---~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------------------- 368 (392)
T 2vu1_A 317 EAFAAQACAVNKDLGWD---PSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------------------- 368 (392)
T ss_dssp CSBHHHHHHHHHHHCCC---GGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH-------------------------
T ss_pred cccHHHHHHHHHHcCCC---cccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc-------------------------
Confidence 77787774 6777643 23578899999999999999999999999999985
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..++++++..+-||.+..+|||.
T Consensus 369 -----------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 -----------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp -----------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -----------CCCEEEEEEecccchheEEEEEe
Confidence 12456665433389999999984
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=280.13 Aligned_cols=223 Identities=14% Similarity=0.132 Sum_probs=184.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.|.++.+++|||+|+++++++++++.++||+|
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999976666555566778888999999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.....++.+++.++|++++++|+.|+++++|+++|+|++ +..++||++||+++..|.++++.|+++|+
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~---~~~G~IVnisS~~g~~~~~~~~~Y~asKa 162 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK---QGKGVIVNTASIAGIRGGFAGAPYTVAKH 162 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTCSSSSCHHHHHHHH
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEEechhhcCCCCCChHHHHHHH
Confidence 999999998753578999999999999999999999999999999764 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----hhhHHHHh-cCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFKS-SKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~~-~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+. ..+ +.-.|+|....+..++.
T Consensus 163 al~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaS 234 (254)
T 4fn4_A 163 GLIGLTRSIAAHYG--DQGIRAVAVLPGTVK-TNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLAS 234 (254)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEEeCCCC-CcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999998865 456788899888664 444322211 11111111 121 34578888887777654
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=308.37 Aligned_cols=266 Identities=18% Similarity=0.230 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
.+|+++++++||+|||+++++++ +|++|+...++. ....++.++++.+|+ +||+++|+++|+
T Consensus 27 ~~L~~~Aa~~Al~dAgl~~~~id----~v~~g~~~~~~~------------~~~~~a~~va~~lGl~~~~p~~~v~~aCa 90 (401)
T 1ulq_A 27 DDLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAGE------------DNRNVARMALLLAGFPVEVAGCTVNRLCG 90 (401)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSST------------TTTTHHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC------------CCChHHHHHHHHhCCCCCccEeeccccch
Confidence 57999999999999999988776 899997654432 124578999999999 899999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH---------------------------HH---------HHH-----
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------------------AY---------IAM----- 666 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~---------------------------~~---------~~~----- 666 (1005)
|+++||++|+++|++|+||++||||++.+.. |. .+ +..
T Consensus 91 s~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~ 170 (401)
T 1ulq_A 91 SGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENL 170 (401)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHH
Confidence 9999999999999999999999999986433 21 11 010
Q ss_pred -----------------H--------HcCC------------------CCCCCC------------CcC-CCCCCCCce-
Q psy612 667 -----------------T--------SAGM------------------LSPDGK------------CYV-FDERANGLV- 689 (1005)
Q Consensus 667 -----------------~--------~~~~------------------ls~~g~------------~~p-fd~~a~G~~- 689 (1005)
+ ..|. +++|.. +|| ||. +|++
T Consensus 171 ~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~--~G~vt 248 (401)
T 1ulq_A 171 AEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFRE--GGTVT 248 (401)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSST--TCSCB
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCC--CCCee
Confidence 0 0112 223433 456 885 7998
Q ss_pred ------ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy612 690 ------PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 763 (1005)
Q Consensus 690 ------~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hg 763 (1005)
++||+++|||+++++|.++|+++|++|+|++.++|+.. +.+.++..++++||++||++|+||||||+|+
T Consensus 249 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ie~he 323 (401)
T 1ulq_A 249 AGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPR-----IMGIGPVPATRKALERAGLSFSDLGLIELNE 323 (401)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG-----GGGGTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred chhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEEec
Confidence 69999999999999999999999999999999988532 1235678999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCC
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSP 843 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~ 843 (1005)
+.|. .|+..++. |+-.. +..++.+.+-|..+||+.+|+|+..+++++++|+++
T Consensus 324 afa~----~~l~~~~~-lg~~~-~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--------------------- 376 (401)
T 1ulq_A 324 AFAA----QALAVLRE-WSLSM-EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--------------------- 376 (401)
T ss_dssp SBHH----HHHHHHHH-HTCCT-TCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred chHH----HHHHHHHH-cCCCC-CCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc---------------------
Confidence 8884 67766654 44211 112344444555689999999999999999999996
Q ss_pred eeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 844 FYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 844 ~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++++++|++||.|..+|||.
T Consensus 377 ---------------~~~~gl~~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 377 ---------------KVQFGLATMCIGVGQGIAVVVEG 399 (401)
T ss_dssp ---------------TCSEEEEEEEETTTEEEEEEEEE
T ss_pred ---------------CCCEEEEEeecCCcccEEEEEEe
Confidence 13678899999999999999985
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=305.99 Aligned_cols=266 Identities=22% Similarity=0.277 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
.+|+++++++||+|||+++++++ +|++|+...++. ....++.++++.||+ +||+++|+++|+
T Consensus 56 ~~La~~Aa~~AL~dAGl~~~~Id----~vi~g~~~~~~~------------~~~~~a~~va~~lGl~~~~p~~~v~~aCa 119 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLNPSEVG----DIVVGTVLAPGS------------QRASECRMAAFYAGFPETVAVRTVNRQCS 119 (442)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----CEEEECCSSBHH------------HHHHHHHHHHHHTTCCTTSCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccC------------CCChHHHHHHHHcCCCCCceEEEeCCcCH
Confidence 57899999999999999988776 689987554321 124678999999999 899999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-------------HH-------HHH---------------------
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------------AY-------IAM--------------------- 666 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-------------~~-------~~~--------------------- 666 (1005)
|+++||++|+++|++|+||++||||++.+.. |. .+ +..
T Consensus 120 Sg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~ 199 (442)
T 2wu9_A 120 SGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAV 199 (442)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999999986543 11 00 000
Q ss_pred ---------HHcCCCCC------------------------CC------------CCcC-CCCCCCCce-------ecCc
Q psy612 667 ---------TSAGMLSP------------------------DG------------KCYV-FDERANGLV-------PSEA 693 (1005)
Q Consensus 667 ---------~~~~~ls~------------------------~g------------~~~p-fd~~a~G~~-------~gEG 693 (1005)
...|.+.. |. .+|| ||. ||++ ++||
T Consensus 200 ~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~--~G~vt~~n~s~~~DG 277 (442)
T 2wu9_A 200 DSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK--DGTTTAGNSSQVSDG 277 (442)
T ss_dssp HHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--TCCCCGGGBCCCEEE
T ss_pred HHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--CCCeechhcCCCCCc
Confidence 01233332 22 3446 885 7998 5999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 694 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 694 a~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
+++|||++++.|+++|++|+++|+|++.+++... +.+.++..++++||++||++|+||||||+|+++|. .|
T Consensus 278 AaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~----~~ 348 (442)
T 2wu9_A 278 AGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA-----IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS----QF 348 (442)
T ss_dssp EEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHH----HH
T ss_pred eEEEEEeeHHHHHHcCCCceEEEEEEEEecCCch-----hcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChH----HH
Confidence 9999999999999999999999999999987321 22457889999999999999999999999999996 68
Q ss_pred HHHHHHHhccCCCCCCce-eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccc
Q psy612 774 INALHDVFKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKK 852 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~ 852 (1005)
+.+++ .|+-.. .++ +.|+.| .+||+.+|+|+..+++++++|+++. |
T Consensus 349 l~~~~-~lG~~~---~~vN~~GG~~-a~GHp~GAsG~~~~~~~v~~Lr~~~--~-------------------------- 395 (442)
T 2wu9_A 349 VYCRN-KLGLDP---EKINVNGGAM-AIGHPLGATGARCVATLLHEMKRRG--K-------------------------- 395 (442)
T ss_dssp HHHHH-HHTCCG---GGBSTTCCHH-HHCCCHHHHHHHHHHHHHHHHHHHC--T--------------------------
T ss_pred HHHHH-HhCCCC---CCcCCCccHh-hcCCchhHHHHHHHHHHHHHHhccC--C--------------------------
Confidence 88874 454321 123 235555 4899999999999999999999963 0
Q ss_pred ccccccCccEEEE-cccCCCCceEEEEEeccc
Q psy612 853 WNTVNEKLRIGAV-SAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 853 w~~~~~~~r~a~v-~sfG~gG~nah~il~~~~ 883 (1005)
..+++++ +++| ||.|+++||+.+.
T Consensus 396 ------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 ------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp ------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred ------CCCEEEEEeecc-cchheEEEEEecc
Confidence 1256664 6788 9999999999763
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=275.50 Aligned_cols=223 Identities=13% Similarity=0.118 Sum_probs=186.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..++..+++++.|.++.+++||++|+++++++++++.++||+|
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 68999999999999999999999999976665555566678888898889999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|+++++|+++|+|++ +...+.||++||+++..+.++++.|+++|+
T Consensus 88 DiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~--~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 164 (255)
T 4g81_D 88 DILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIA--RNSGGKIINIGSLTSQAARPTVAPYTAAKG 164 (255)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred cEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--ccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 99999999988 889999999999999999999999999999999843 345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|.... ........+...+. .-+|+|....+..+++
T Consensus 165 al~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S 234 (255)
T 4g81_D 165 GIKMLTCSMAAEWA--QFNIQTNAIGPGYIL-TDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSS 234 (255)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999998865 456788899888764 4443321 11112222333332 3478888887776654
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=303.80 Aligned_cols=237 Identities=20% Similarity=0.206 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccch
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 628 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taCs 628 (1005)
++++++++++||+|||+++++++ ++++|+..+++. ...+++++++.||+ +||+++|+++|+
T Consensus 33 ~~l~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------~~~~a~~va~~lgl~~~~p~~~v~~aCa 95 (395)
T 2ib8_A 33 TKLGSIAIQGAIEKAGIPKEEVK----EAYMGNVLQGGE-------------GQAPTRQAVLGAGLPISTPCTTINKVCA 95 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTCCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------CchHHHHHHHHcCCCCCceEEEeccccc
Confidence 57999999999999999987776 677776543221 12468999999999 899999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH------------------HHHH-----------------HHHcC--
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------------AYIA-----------------MTSAG-- 670 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~------------------~~~~-----------------~~~~~-- 670 (1005)
|+++||++|+++|++|+||++||||++.+.. |. .+.. ..+.|
T Consensus 96 S~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~s 175 (395)
T 2ib8_A 96 SGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIA 175 (395)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999996432 11 0000 11111
Q ss_pred -----------------------------------------CCCCCCCCcC--CCC---------CCCCce-------ec
Q psy612 671 -----------------------------------------MLSPDGKCYV--FDE---------RANGLV-------PS 691 (1005)
Q Consensus 671 -----------------------------------------~ls~~g~~~p--fd~---------~a~G~~-------~g 691 (1005)
+++.|+.+|+ ||. +++|++ ++
T Consensus 176 re~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~ 255 (395)
T 2ib8_A 176 RNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLN 255 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCE
T ss_pred HHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccc
Confidence 1334444553 776 679999 99
Q ss_pred CccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 692 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 692 EGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p--~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
||++++||+++++|.++|++||++|+|++.++ +.| .+.+|..++++||++||++|+||||||.|
T Consensus 256 dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-------~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~------- 321 (395)
T 2ib8_A 256 DGAAALVLMTADAAKRLNVTPLARIVAFADAA-------VEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVN------- 321 (395)
T ss_dssp EEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-------CCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC-------
T ss_pred cceeEEEEecHHHHHhcCCCccEEEEEEEEec-------cChhhccccHHHHHHHHHHHcCCCHHHcCEEEEc-------
Confidence 99999999999999999999999999999875 233 34678999999999999999999999965
Q ss_pred CHHHHHHHHHH--hccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 770 DPVEINALHDV--FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 770 D~~E~~al~~~--~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
|+.|..+|..+ |+-. ..++.+++.|.++||+.+|+|+.++++++++|++
T Consensus 322 D~f~~~~l~~~e~lg~~---~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 322 EAFSLVVLANIKMLEID---PQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp CSBHHHHHHHHHHHTCC---GGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred cccHHHHHHHHHHcCCC---ccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 88899999887 7542 2357789999999999999999999999999986
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=299.59 Aligned_cols=264 Identities=22% Similarity=0.266 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taC 627 (1005)
.++|+++++++||+|||+++++++ +|++|+...++. ....+..+++.+|+ +||+++|+++|
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id----~v~~g~~~~~~~-------------~~~~a~~~a~~lGl~~~~p~~~v~~aC 117 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG----DICVGNVLQPGA-------------GAIMARIAQFLSDIPETVPLSTVNRQC 117 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECSSSBGG-------------GHHHHHHHHHHTTCCTTSCEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCccc-------------cccHHHHHHHHcCCCCCceEEEeCCCC
Confidence 478999999999999999988876 689987654321 13455667899999 89999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HH-----------------------HHHH------------------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-----------------------AYIA------------------ 665 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~-----------------------~~~~------------------ 665 (1005)
+|+++||++|+++|++|+||++||||++.+.. |. ....
T Consensus 118 ss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a 197 (418)
T 2iik_A 118 SSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFA 197 (418)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999999999999999999997543 10 0000
Q ss_pred --------HH-HcC-----------------------CCCCCCCCcC-------------CCCCC-----CCceecCccE
Q psy612 666 --------MT-SAG-----------------------MLSPDGKCYV-------------FDERA-----NGLVPSEAVV 695 (1005)
Q Consensus 666 --------~~-~~~-----------------------~ls~~g~~~p-------------fd~~a-----~G~~~gEGa~ 695 (1005)
.. ..+ .+++|+.||| ||.++ ||++++||++
T Consensus 198 ~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAa 277 (418)
T 2iik_A 198 LASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAA 277 (418)
T ss_dssp HHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEE
T ss_pred HHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCce
Confidence 00 112 2556889999 99885 9999999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
++||++++.|.++|++|+++|+|++.+++.. .+.+.++..++++||++||++|+||||||+|++. ..+|.+|++
T Consensus 278 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af-~~~~~~~~~ 351 (418)
T 2iik_A 278 AILLARRSKAEELGLPILGVLRSYAVVGVPP-----DIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAF-ASQAAYCVE 351 (418)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCG-----GGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSB-HHHHHHHHH
T ss_pred EEEEecHHHHHhcCCCceEEEEEEEeccCCc-----hhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccc-hHHHHHHHH
Confidence 9999999999999999999999999886321 1224578899999999999999999999999854 478999998
Q ss_pred HHHHHhccCCCCCCceeEeccC--CCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccc
Q psy612 776 ALHDVFKNKTYNQKFCAITSNK--SNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853 (1005)
Q Consensus 776 al~~~~~~~~~~~~~~~igsvK--~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w 853 (1005)
+|.- .. .+|...| .++||+.+|+|+..+++++++|+++
T Consensus 352 ~lg~--~~-------~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~------------------------------- 391 (418)
T 2iik_A 352 KLRL--PP-------EKVNPLGGAVALGHPLGCTGARQVITLLNELKRR------------------------------- 391 (418)
T ss_dssp HHTC--CG-------GGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------------------
T ss_pred HcCC--Cc-------cccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc-------------------------------
Confidence 8742 11 1354455 4689999999999999999999883
Q ss_pred cccccCcc-EEEEcccCCCCceEEEEEec
Q psy612 854 NTVNEKLR-IGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 854 ~~~~~~~r-~a~v~sfG~gG~nah~il~~ 881 (1005)
..| ++.++.-+.||....+|||.
T Consensus 392 -----~~~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 392 -----GKRAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp -----TSCEEEEEEEEETTTEEEEEEEEE
T ss_pred -----CCCeeeEEEEeeccchhheEEEec
Confidence 113 55666666788999999985
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=321.93 Aligned_cols=232 Identities=22% Similarity=0.296 Sum_probs=206.1
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHH-HcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 138 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La-~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 138 (1005)
.++++|+||||||+||||+++|++|+ ++|+++|++++|+. ..+++.+++++.|.++.+++|||+|++++++++++
T Consensus 526 ~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~ 605 (795)
T 3slk_A 526 VWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLAS 605 (795)
T ss_dssp CCCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred ccccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 47889999999999999999999999 79999888888873 34677888888899999999999999999999999
Q ss_pred HHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 139 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 139 i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
+.+.+ +||+||||||+.. +..+.+++.++|++++++|+.|+++|++++.|. + +||+|||+++..|++||
T Consensus 606 ~~~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~--------l-~iV~~SS~ag~~g~~g~ 674 (795)
T 3slk_A 606 IPDEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPD--------V-ALVLFSSVSGVLGSGGQ 674 (795)
T ss_dssp SCTTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT--------S-EEEEEEETHHHHTCSSC
T ss_pred HHHhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC--------C-EEEEEccHHhcCCCCCC
Confidence 98877 9999999999998 899999999999999999999999999996443 3 89999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++|+++|+|+++|+++++..|+ ++.+|+||.|.+.||...........+.+.|+.+++++++++.+..++..+.
T Consensus 675 ~~YaAaka~~~alA~~~~~~Gi------~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 675 GNYAAANSFLDALAQQRQSRGL------PTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC------CEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCC------eEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999999999987 9999999999998887543333344567789999999999999999999998
Q ss_pred hhhhhhchhhHHHH
Q psy612 299 IQYLVLSGELEKLN 312 (1005)
Q Consensus 299 ~~~~v~~~~~~~~~ 312 (1005)
+.+++...+|..+.
T Consensus 749 ~~~~~~~~d~~~~~ 762 (795)
T 3slk_A 749 TVVAPVRFSRLSDG 762 (795)
T ss_dssp SSCCCCCBCCC---
T ss_pred cEEEEEecCHHHhc
Confidence 88888888876643
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=299.95 Aligned_cols=266 Identities=17% Similarity=0.193 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taC 627 (1005)
...|+++++++||+|||+++++++ +|++|+...++. ...++.++++.+|+ ++|+++|+++|
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId----~vi~g~~~~~~~-------------~~~~a~~v~~~lGl~~~~p~~~v~~aC 93 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID----ESLLGGVLTAGL-------------GQNIARQIALGAGIPVEKPAMTINIVC 93 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCCCC-------------CchHHHHHHHHcCCCCCceEEEecccc
Confidence 357899999999999999998887 789987654321 12468899999999 58999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHH--------------------------------------------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAY-------------------------------------------- 663 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~-------------------------------------------- 663 (1005)
+|++.||++|+++|++|+||.+||+|++.+..+...
T Consensus 94 ss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 173 (396)
T 4dd5_A 94 GSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQW 173 (396)
T ss_dssp GHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHh
Confidence 999999999999999999999999999875431000
Q ss_pred ----------H--H------HHHcC------------------CCCCCCCCcC-------------CCC-----CCCCce
Q psy612 664 ----------I--A------MTSAG------------------MLSPDGKCYV-------------FDE-----RANGLV 689 (1005)
Q Consensus 664 ----------~--~------~~~~~------------------~ls~~g~~~p-------------fd~-----~a~G~~ 689 (1005)
. . -...| .+++|..+|+ |+. ..|...
T Consensus 174 g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~ 253 (396)
T 4dd5_A 174 NITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASG 253 (396)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCC
Confidence 0 0 00011 2456666664 553 356777
Q ss_pred ecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 690 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 690 ~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
++||++++||+++++|+++|++|+++|+|++++++. +.|.+.+|..+++++|+++|++|+||+|||.|.+.+
T Consensus 254 ~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~--- 325 (396)
T 4dd5_A 254 INDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVD-----PKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFA--- 325 (396)
T ss_dssp CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBH---
T ss_pred cCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCC-----CCcccHHHHHHHHHHHHHcCCCHHHcCEEEecChHH---
Confidence 899999999999999999999999999999998863 233456799999999999999999999999987753
Q ss_pred CHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccc
Q psy612 770 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 849 (1005)
Q Consensus 770 D~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~ 849 (1005)
+|..++.+.|+-.. .++.+++.|.++||+++|+|+.+++|++++|+++
T Consensus 326 --~~~~~~~~~lg~~~---~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------------------- 373 (396)
T 4dd5_A 326 --AQSVAVIRDLNIDM---NKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--------------------------- 373 (396)
T ss_dssp --HHHHHHHHHHTCCT---TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------------------
T ss_pred --HHHHHHHHHhCCCC---CccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 78888899987432 3578999999999999999999999999999984
Q ss_pred cccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 850 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 850 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|+++++..+-||....+|||.
T Consensus 374 ---------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 ---------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp ---------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ---------CCCeEEEEEcccCCceeEEEEeC
Confidence 13677888888999999999973
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=322.31 Aligned_cols=383 Identities=10% Similarity=0.009 Sum_probs=269.4
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Cccccc
Q psy612 546 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAIN 624 (1005)
Q Consensus 546 ~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~ 624 (1005)
.++|. .|+.+++.+||+|||++++++..--.|++++........ ..........++..++..+|+.+ |.++++
T Consensus 39 ~~s~~-dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~-----~~~~~g~~~~~~~~va~~lGl~~~~~~~~~ 112 (520)
T 4egv_A 39 GMSSV-ELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGP-----ASAPLGVSSNYPRSVARNIGADPAHAVLEV 112 (520)
T ss_dssp CCCHH-HHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------------------CCHHHHHHHHHTCCCSEEEECC
T ss_pred CCCHH-HHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccch-----hhhhhccccCHHHHHHHHcCCCCceEEEec
Confidence 45554 378899999999999998876644445554432211100 01111223346777889999987 778899
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHH-------------------------------------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT------------------------------------- 667 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~------------------------------------- 667 (1005)
.+|+|++.||++|+++|++|+||++|+||++.+.+...+....
T Consensus 113 ~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~ 192 (520)
T 4egv_A 113 IGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAP 192 (520)
T ss_dssp SSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHH
Confidence 9999999999999999999999999999999764321110000
Q ss_pred ------------HcC---------------------CCCCCCC--------------------CcCCCCCCCCceecCcc
Q psy612 668 ------------SAG---------------------MLSPDGK--------------------CYVFDERANGLVPSEAV 694 (1005)
Q Consensus 668 ------------~~~---------------------~ls~~g~--------------------~~pfd~~a~G~~~gEGa 694 (1005)
..+ ...|+.. +.|+-.-.|....++|+
T Consensus 193 ~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGA 272 (520)
T 4egv_A 193 VQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQG 272 (520)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEE
T ss_pred HHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcce
Confidence 000 0001110 11222223455578999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy612 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPN---GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771 (1005)
Q Consensus 695 ~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~---~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~ 771 (1005)
+++||.+.+.|.+.|.++++.|++++.+.......+..|+ ..++..+++++|++||++++|||++|.|...+
T Consensus 273 AAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~----- 347 (520)
T 4egv_A 273 AALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFP----- 347 (520)
T ss_dssp EEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSS-----
T ss_pred EEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcH-----
Confidence 9999999999999999999888888877554333333343 56899999999999999999999999997554
Q ss_pred HHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccc
Q psy612 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 851 (1005)
Q Consensus 772 ~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~ 851 (1005)
++..+..+.++-......++.+++-+.++||+.+|+|+.+++|++.+|+++..+..++ .+|+.+++..+.+.+.+++.
T Consensus 348 ~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~~~~l~~~~~ 425 (520)
T 4egv_A 348 FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYSVGIYSTEPA 425 (520)
T ss_dssp HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeeeEEEEcCCCC
Confidence 6777777777754333445677667777999999999999999999999999888776 59999999999999999999
Q ss_pred cccccccCccEEEEcccCCCCceEEEEEecccccccccCCCCCccCCCCeEEEEeecCCHHHHHHHH----HHHHHHHHh
Q psy612 852 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKM----KQILLFLRK 927 (1005)
Q Consensus 852 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~----~~l~~~l~~ 927 (1005)
+|+.. +.+|+++|+| +|+|++|++.+..... ...........+...+||+|+++.++.++ ..+...+..
T Consensus 426 ~w~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~a~-~~~~t~~~~~~~~~~~~~~r~~~~~R~~A~~~~~~~~~~~~~ 498 (520)
T 4egv_A 426 DWVAD-NSAQLQAEHD-----AQPKVAITEKADGTGT-IETYTVRYDWTPHTGIIIGRLDDGSRFLAKTKDEDLVKLLSE 498 (520)
T ss_dssp CCCCC-CHHHHHHHHH-----TSCCCCBCSSCCEEEE-EEEEEEESSEESCEEEEEEECSSCCEEEEEECCHHHHHHHHH
T ss_pred CCCCC-CCCccccccc-----CCCCcccccCCCCCCC-CCCCCcCCCCCcceEEEEEECchhhHhhhcCCCHHHHhhccC
Confidence 99875 4567788988 9999999987643211 00001111122356789999999887665 344444443
Q ss_pred CCCCCHHHHHHHHHhcCCcCCcEEEE
Q psy612 928 NNTVCIENFVYTLMQGRHHFQYRCAI 953 (1005)
Q Consensus 928 ~~~~~l~~~a~tl~~~r~~~~~R~a~ 953 (1005)
.+ .+.+++.+.|..+.+|+++
T Consensus 499 ~~-----~~g~~~~~~~~~~~~ra~~ 519 (520)
T 4egv_A 499 GD-----PIGAKIVVTPGEKSNRAVL 519 (520)
T ss_dssp SC-----CTTCEEEEECCSSCCEEEE
T ss_pred cC-----cccCeEEEeccCCCccccc
Confidence 32 2778889999999999876
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-30 Score=292.46 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccc
Q psy612 547 MDPRQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAI 623 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledA-G~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v 623 (1005)
..++++|+++++++||+|| |+++++++ +|++|+...++. ....++.++++.+|+ ++|+++|
T Consensus 24 ~~~~~~L~~~a~~~Al~~a~gi~~~~Id----~v~~g~~~~~~~------------~~~~~a~~~~~~~Gl~~~~p~~~v 87 (387)
T 3goa_A 24 NVRAEDLSAHLMRSLLARNPSLTAATLD----DIYWGCVQQTLE------------QGFNIARNAALLAEIPHSVPAVTV 87 (387)
T ss_dssp TSCHHHHHHHHHHHHHHHCTTSCGGGCC----EEEEECSCCSBT------------TTTTHHHHHHHHTTCCTTSCCEEE
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcC----EEEEEcccCCcc------------cccHHHHHHHHHcCCCCCCcEeEe
Confidence 4567889999999999999 99998887 799987654321 012467899999999 6899999
Q ss_pred cccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHH--------------------------------------HHH
Q psy612 624 NTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------------------------YIA 665 (1005)
Q Consensus 624 ~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~--------------------------------------~~~ 665 (1005)
+++|+|++.||++|+++|++|+||.+||+|++.+..+.. ...
T Consensus 88 ~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~ 167 (387)
T 3goa_A 88 NRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQ 167 (387)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999999999986543100 000
Q ss_pred H-----------HHc-------------------CCCCCCCCCcC-------------CCC------CCCCceecCccEE
Q psy612 666 M-----------TSA-------------------GMLSPDGKCYV-------------FDE------RANGLVPSEAVVA 696 (1005)
Q Consensus 666 ~-----------~~~-------------------~~ls~~g~~~p-------------fd~------~a~G~~~gEGa~~ 696 (1005)
+ ... ..+++|+.+|+ |+. ..|+..++||+++
T Consensus 168 ~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaa 247 (387)
T 3goa_A 168 FAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAA 247 (387)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEE
T ss_pred HHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEE
Confidence 0 001 12456777776 775 3677889999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 776 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~a 776 (1005)
+||+++++|+++|++|+++|+|+++++|+.... ..++..+++++|++||++|+||||||+|++.|. .|+..
T Consensus 248 vvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~did~ve~h~~f~~----~~~~~ 318 (387)
T 3goa_A 248 MLVMSESRARELGLKPRARIRSMAVVGCDPSIM-----GYGPVPASKLALKKAGLSASDIDVFEMNEAFAA----QILPC 318 (387)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCTTST-----TCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH----HHHHH
T ss_pred EEEecHHHHHHcCCCccEEEEEEEEcCCCCCcc-----hHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH----HHHHH
Confidence 999999999999999999999999999875432 235689999999999999999999999999985 34443
Q ss_pred HHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccccccc
Q psy612 777 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 856 (1005)
Q Consensus 777 l~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~ 856 (1005)
+ +.|+--.....++.+.+.|..+||+++|+|+..+++++++|+++
T Consensus 319 ~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------------- 363 (387)
T 3goa_A 319 I-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------------------- 363 (387)
T ss_dssp H-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------------
T ss_pred H-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence 3 33432100112345566677789999999999999999999972
Q ss_pred ccCccEEEEcccCCCCceEEEEEec
Q psy612 857 NEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 857 ~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|++.++.-+-||....+|||.
T Consensus 364 --~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 364 --DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp --TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --CCCEEEEEeccCcCceEEEEEEe
Confidence 12556555555668888888874
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=299.88 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taC 627 (1005)
...|+++++++||+|||+++++++ +|++|+...++. ....+.++++.+|+ ++|+++|+++|
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id----~v~~g~~~~~~~-------------~~~~a~~i~~~lGl~~~~p~~~v~~aC 91 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD----EVILGHCIQRTD-------------EANTARTAALAAGFPDTVTGYTIQRQC 91 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCCGG-------------GCSHHHHHHHHTTCCTTCEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC----EEEEEEccCCCc-------------cchHHHHHHHHcCCCCCceEEEecCcc
Confidence 357999999999999999998887 788887553321 12367889999999 68999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHH---------------------------------------------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------------------------------- 662 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~--------------------------------------------- 662 (1005)
+|++.||++|+++|++|+||.+||+|++.+.....
T Consensus 92 ss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 171 (394)
T 3ss6_A 92 SSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYE 171 (394)
T ss_dssp GHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999986543100
Q ss_pred --------HH--HHH------HcC------------------CCCCCCCCcC-------------CCC-----CCCCcee
Q psy612 663 --------YI--AMT------SAG------------------MLSPDGKCYV-------------FDE-----RANGLVP 690 (1005)
Q Consensus 663 --------~~--~~~------~~~------------------~ls~~g~~~p-------------fd~-----~a~G~~~ 690 (1005)
+. ... ..| ++++|+.+|+ |+. ..|+..+
T Consensus 172 ~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~ 251 (394)
T 3ss6_A 172 ITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGL 251 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCc
Confidence 00 000 000 4688888886 774 3677788
Q ss_pred cCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
+||++++||+++++|.++|++|+++|+|++++++. ..+.+.+|..+++++|+++|++|+||+|||.|.+.+
T Consensus 252 ~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d~fa---- 322 (394)
T 3ss6_A 252 NDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVD-----PKIMGIGPAPAIRKGLEKVDWSLEDADLLEINEAFA---- 322 (394)
T ss_dssp EEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBH----
T ss_pred ccceeEEEeccHHHHHHCCCCceEEEEEEEEecCC-----CccchHHHHHHHHHHHHHcCCCHHHcCEEEeCCchH----
Confidence 99999999999999999999999999999998632 123345689999999999999999999999986643
Q ss_pred HHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccc
Q psy612 771 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 850 (1005)
Q Consensus 771 ~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~ 850 (1005)
+|..++.+.|+-.. .++.+++.|.++||+.+|+|+.+++|++++|+++
T Consensus 323 -~~~~~~~~~lg~~~---~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------- 370 (394)
T 3ss6_A 323 -AQYLAVEKELDLDR---EKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------------------- 370 (394)
T ss_dssp -HHHHHHHHHHTCCG---GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------------------
T ss_pred -HHHHHHHHHhCCCC---CCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 89999999997432 3578999999999999999999999999999984
Q ss_pred ccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 851 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 851 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+++.++-.+-||....+|||.
T Consensus 371 --------~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 371 --------GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp --------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred --------CCCEEEEEEccCcCceeEEEEEc
Confidence 12566666667788888888874
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=293.70 Aligned_cols=265 Identities=17% Similarity=0.204 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taC 627 (1005)
.+.|+++++++||+|||+++++++ +|++|+....+. ...++.++++.+|+ ++|+++|+++|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id----~v~~g~~~~~~~-------------~~~~a~~~~~~lGl~~~~p~~~v~~~C 91 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID----EVIIGNVLQTGL-------------GQNVARQIAINAGIPNSVPSYTVNKLC 91 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECCCCSST-------------TCCHHHHHHHHTTCCTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------cchHHHHHHHHcCCCCCceEEEccccc
Confidence 356999999999999999998887 788887543221 12367899999999 68999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHH--------------------------------H----------
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI--------------------------------A---------- 665 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~--------------------------------~---------- 665 (1005)
+|++.||++|+++|++|+||.+||+|++.+....... .
T Consensus 92 ss~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 171 (395)
T 4e1l_A 92 GSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKF 171 (395)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHh
Confidence 9999999999999999999999999998766532210 0
Q ss_pred -----------H---H------HcC-------------------CCCCCCCCcC-------------CCC-----CCCCc
Q psy612 666 -----------M---T------SAG-------------------MLSPDGKCYV-------------FDE-----RANGL 688 (1005)
Q Consensus 666 -----------~---~------~~~-------------------~ls~~g~~~p-------------fd~-----~a~G~ 688 (1005)
. . ..| ++++|+.+|+ |+. ..|+.
T Consensus 172 g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~ 251 (395)
T 4e1l_A 172 EFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNAS 251 (395)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCC
Confidence 0 0 000 3566777775 653 35677
Q ss_pred eecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 689 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.++||++++||+++++|.++|++|+++|+|++++++.- .+.+.+|..+++++|+++|++|+||+|||.|...+
T Consensus 252 ~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~ai~~al~~agl~~~dId~ve~~d~fa-- 324 (395)
T 4e1l_A 252 GINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEP-----EVMGTGPIPATRKALKKAGLSINDIDLIEANEAFA-- 324 (395)
T ss_dssp CCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGTTCTHHHHHHHHHHHTTCCGGGCSEEEECCSBH--
T ss_pred CccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEecChhH--
Confidence 78999999999999999999999999999999998632 12344688999999999999999999999985532
Q ss_pred CCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecc
Q psy612 769 GDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 848 (1005)
Q Consensus 769 gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~ 848 (1005)
+|..++.+.|+-.. .++.+++.|.++||+++|+|+.+++|++++|+++
T Consensus 325 ---~~~~~~~~~lg~~~---~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------------------- 372 (395)
T 4e1l_A 325 ---AQALAVKNELQIDS---SKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------------------- 372 (395)
T ss_dssp ---HHHHHHHHHHTCCG---GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------------------
T ss_pred ---HHHHHHHHHhCCCC---CCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------------------
Confidence 88899999987432 3578999999999999999999999999999984
Q ss_pred ccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 849 SNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 849 ~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+++.++..+-||....+|||
T Consensus 373 ----------~~~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 373 ----------KVETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp ----------TCSEEEEEEESSTTEEEEEEEE
T ss_pred ----------CCCEEEEEEccCCCceEEEEEe
Confidence 1256677777888888889887
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=289.94 Aligned_cols=250 Identities=17% Similarity=0.131 Sum_probs=192.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCccccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTA 626 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~ta 626 (1005)
-++..+++++++++||+|||++++++. +|++|+...++. . ...+++++..||+++|+++|+++
T Consensus 47 ~~~~~~la~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~--------~-----~~~a~~v~~~lgl~~~~~~v~~a 109 (322)
T 1ub7_A 47 DEYTSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDAL--------F-----PDTAALVQARFGLKAFAYDLLAG 109 (322)
T ss_dssp TCCHHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEE--------E-----SCHHHHHHHHTTCCCEEEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC--------C-----CcHHHHHHHHhCCCCEEEeeCcc
Confidence 356789999999999999999887664 688887653321 1 12688999999999999999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||++|+++|++|+||.+||+|++.+ ++. + .||| +++|+++|||++++||++.++
T Consensus 110 Cas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~------~~~d-~~~~~~~GdGA~A~vL~~~~~-- 169 (322)
T 1ub7_A 110 CPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI----------I------DWND-RATAVLFGDGGGAAVVGKVRE-- 169 (322)
T ss_dssp TTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT----------S------CTTC-HHHHTTBCCEEEEEEEECCCT--
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc----------c------Chhh-cccceeeccccEEEEEEecCC--
Confidence 9999999999999999999999999999973 331 1 2455 678999999999999998764
Q ss_pred cCCCceEEEE-EEeeeccCCCCC---CCCCC-----------CH--------HHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy612 707 SDGDPIHAII-RGSGINYDGKTN---GITAP-----------NG--------ISQTELIKSVYKKSNLNPEDINYIITHG 763 (1005)
Q Consensus 707 ~~g~~I~avI-~g~~~~~dG~~~---~~~~p-----------~~--------~~q~~~i~~al~~agi~~~~I~yve~hg 763 (1005)
+++|++.+ .+.+...|.... +...| ++ ..+.++|+++|+++|++|+||+||++|+
T Consensus 170 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~ 247 (322)
T 1ub7_A 170 --GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQ 247 (322)
T ss_dssp --TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred --CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 35687765 333333322110 00013 23 6889999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCC
Q psy612 764 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSP 843 (1005)
Q Consensus 764 tgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~ 843 (1005)
++|++.| ++.+.|+-... . +-++|+++||+.+|+++..|.++ ++++.+.|
T Consensus 248 ~~~~~~d-----~~~~~lg~~~~---~--~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~~----------------- 297 (322)
T 1ub7_A 248 ANLRIID-----AARERLGLPWE---R--VAVNVDRYGNTSTASIPLALKEA---VDAGRIRE----------------- 297 (322)
T ss_dssp SCHHHHH-----HHHHTTTCCGG---G--BCCCHHHHCBCGGGHHHHHHHHH---HHHTSSCT-----------------
T ss_pred CCHHHHH-----HHHHHcCCCHH---H--HHHHHHhhCcHHHHHHHHHHHHH---HHhCCCCC-----------------
Confidence 9998766 45667764321 1 33689999999999999988764 46664411
Q ss_pred eeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 844 FYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 844 ~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.+++++++||+|++|+++||+-
T Consensus 298 ----------------g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 298 ----------------GDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------------TCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------------CCEEEEEEEChhheeEEEEEEe
Confidence 2467899999999999999974
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=287.45 Aligned_cols=279 Identities=12% Similarity=0.072 Sum_probs=207.1
Q ss_pred CC-CceEEEEecCCCCCcChHHHHHHHHHHhcCCCceEEEEecCceeEEEeeeeeccccccCCccccCCCEEEEECChhH
Q psy612 1 MP-ETQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGR 79 (1005)
Q Consensus 1 lp-~~~v~~vd~~~~~~~~~~~~~~~l~~E~~~~~~~~v~~r~g~~~r~~~~l~~~~~~~~~~~~~~~~~~~lITGg~gG 79 (1005)
+| ++.+++||+++..... ...+..++.++... ..+||++ .++.....+..++.... ...++|+||||||+||
T Consensus 152 ~p~~~~~~~vd~~~~~~~~-~~~~~~~~~~~~~~---~~a~~~~--~~~~~~~~~~~~~~~~~-~~l~gk~~LVTGgsgG 224 (454)
T 3u0b_A 152 LRRGATVSLVYLSADAKPG-ATGLESTMRFILSA---KSAYVDG--QVFRVGAADSTPPADWD-KPLDGKVAVVTGAARG 224 (454)
T ss_dssp CCTTCEEEEEEECTTSCTT-CGGGHHHHHHHSSG---GGTTCCS--EEEEECSCCCCCCSCTT-STTTTCEEEESSCSSH
T ss_pred CCCCcEEEEEEeCCCCCcc-hhHHHHHHHHhhCC---ceeEEcC--EEEEecCCCCCCCCccc-cCCCCCEEEEeCCchH
Confidence 47 5999999998766532 23345666666543 3488988 67655443332222221 2236899999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC-ccEEEEcCcccCc
Q psy612 80 LGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP-IDGVLHIAGISGL 158 (1005)
Q Consensus 80 IG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~-idgvIh~AG~~~~ 158 (1005)
||+++|++|+++|++ |++++|+...+++.+..++.+ +.+++||++|.++++++++++.+++|+ ||+||||||+..
T Consensus 225 IG~aiA~~La~~Ga~-Vvl~~r~~~~~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~- 300 (454)
T 3u0b_A 225 IGATIAEVFARDGAT-VVAIDVDGAAEDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITR- 300 (454)
T ss_dssp HHHHHHHHHHHTTCE-EEEEECGGGHHHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCC-
T ss_pred HHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccC-
Confidence 999999999999996 555566554444444444444 458899999999999999999999986 999999999998
Q ss_pred cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHHHhc
Q psy612 159 TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 159 ~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
+..+.+++.++|++++++|+.|++++++++.+.| ...+.++||+|||+++..|.+++++|+++|+++++|++.++.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~---~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e 377 (454)
T 3u0b_A 301 DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNG---TIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPV 377 (454)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTT---SSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999998874 4456899999999999999999999999999999999988876
Q ss_pred cccccCCceEEEEeCCcccCcccccccchhhhHHHHh-cC-CCCCCHHHHHHHHHHHHhc
Q psy612 239 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 239 g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
.. ..++++++|+||.|. +.|.............. .. .+..++++..+.+..++..
T Consensus 378 ~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~ 434 (454)
T 3u0b_A 378 LA--DKGITINAVAPGFIE-TKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASP 434 (454)
T ss_dssp HH--TTTCEEEEEEECSBC-C----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred hh--hcCcEEEEEEcCccc-ChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCC
Confidence 43 445699999999885 45543222111111111 11 1235788988888877653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=265.56 Aligned_cols=234 Identities=14% Similarity=0.146 Sum_probs=184.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+. .+..+++.+.+.++.+++||++|+++++++++++.++||+|
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-GAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-HHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 68999999999999999999999999976666555444 45566777778899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. . ...+.+.++|++++++|+.|+++++++++|+|++ ..+.||++||+++..|.++++.|+++|+
T Consensus 85 DiLVNnAGi~~-~-~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~----~~G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 85 DGLVNNAGVND-G-IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKA----TRGAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp CEEEECCCCCC-C-CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-C-CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh----cCCeEEEEeehhhccCCCCchHHHHHHH
Confidence 99999999865 3 3458899999999999999999999999999853 2488999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-------chhhhHHHHhcCC--CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------NEQTDFYFKSSKQ--KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~~~~~~~~~~~g~--~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|.... ............+ +.-+|+|...++..+++..
T Consensus 159 av~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~ 235 (258)
T 4gkb_A 159 AQLALTREWAVALR--EHGVRVNAVIPAEVM-TPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR 235 (258)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSBC-CSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEecCCCC-ChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999998865 455688888887664 4443221 1111122222222 4457889888877766433
Q ss_pred c----hhhhhhchhhHH
Q psy612 298 K----IQYLVLSGELEK 310 (1005)
Q Consensus 298 ~----~~~~v~~~~~~~ 310 (1005)
. .+.+.++|.|..
T Consensus 236 a~~iTG~~i~VDGG~T~ 252 (258)
T 4gkb_A 236 ASHTTGEWLFVDGGYTH 252 (258)
T ss_dssp GTTCCSCEEEESTTTTT
T ss_pred hcCccCCeEEECCCcch
Confidence 2 244556666643
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=292.05 Aligned_cols=241 Identities=17% Similarity=0.161 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHhcC----CCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCccccc
Q psy612 551 QRHLLQESWLALEDAG----YGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAIN 624 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG----~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~ 624 (1005)
++|+++++++||+||| +++++++ +|++|+...++. ...++.++++.+|+ +||+++|+
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id----~v~~g~~~~~~~-------------~~~~a~~va~~lGl~~~~p~~~v~ 98 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNVGA-------------GATEHRAACLASGIPYSTPFVALN 98 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSBGG-------------GHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCC----EEEEEecCCCCC-------------CChHHHHHHHHcCCCCCceEEEEc
Confidence 5789999999999999 9887776 689987654321 24678999999999 89999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCC-HHH-----------H------------HHHH-------------
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-----------Y------------IAMT------------- 667 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~-~~~-----------~------------~~~~------------- 667 (1005)
++|+|++.||++|+++|++|+||++||||++.+.. |.. + +...
T Consensus 99 ~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre 178 (393)
T 1afw_A 99 RQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRK 178 (393)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHH
T ss_pred CcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHH
Confidence 99999999999999999999999999999986322 110 0 0000
Q ss_pred -----------------HcC---------------CCCCCCCCc------------C-CCCCCCCce-------ecCccE
Q psy612 668 -----------------SAG---------------MLSPDGKCY------------V-FDERANGLV-------PSEAVV 695 (1005)
Q Consensus 668 -----------------~~~---------------~ls~~g~~~------------p-fd~~a~G~~-------~gEGa~ 695 (1005)
..| ++++|+.|| | ||.++ |++ ++||++
T Consensus 179 ~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G~vt~~~~~~~~dGAa 257 (393)
T 1afw_A 179 DQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-GTTTAGNASQVSDGVA 257 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEE
T ss_pred HHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-CCeechhcCcccchhh
Confidence 011 246676655 5 98654 877 799999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 775 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~ 775 (1005)
+|||+++++|+++|++||++|+|++.++|... +.+.++..++++||++||++|+||||||+|+++|. .|+.
T Consensus 258 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~----~~l~ 328 (393)
T 1afw_A 258 GVLLARRSVANQLNLPVLGRYIDFQTVGVPPE-----IMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA----QALY 328 (393)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH----HHHH
T ss_pred eeeEecHHHHHHcCCCccEEEEEEEEeccChh-----hcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH----HHHH
Confidence 99999999999999999999999999988421 23457899999999999999999999999999995 6777
Q ss_pred HHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 776 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 776 al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
.++. |+-.. .++.+.+-|..+||+.+|+|+..+++++++|+++
T Consensus 329 ~~~~-lg~~~---~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~ 371 (393)
T 1afw_A 329 CIHK-LGIDL---NKVNPRGGAIALGHPLGCTGARQVATILRELKKD 371 (393)
T ss_dssp HHHH-HTCCG---GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred HHHH-hCCCC---cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 6644 54321 1233333344589999999999999999999985
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=256.12 Aligned_cols=225 Identities=16% Similarity=0.097 Sum_probs=181.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||++|||+++|+.|+++|++++++. |++ +..+++.+.+.++.+++||++|+++++++++++.++||+||
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~-~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFID-IDE---KRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-SCH---HHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEe-CCH---HHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999999766654 442 33445566677899999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||+.. ..++.+++.++|++++++|+.|+++++|++.|+|++ ..+.||++||+++..+.++++.|+++|++
T Consensus 78 iLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~----~~G~IInisS~~~~~~~~~~~~Y~asKaa 152 (247)
T 3ged_A 78 VLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIK----NKGRIINIASTRAFQSEPDSEAYASAKGG 152 (247)
T ss_dssp EEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----TTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----cCCcEEEEeecccccCCCCCHHHHHHHHH
Confidence 9999999987 889999999999999999999999999999999854 24899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhccc--hhhhhh
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK--IQYLVL 304 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~~--~~~~v~ 304 (1005)
+.+|++.++.+.. . ++++.+|.+|... +.|.... .+...+...+ +.-+|+|...++..+++... .+.+.+
T Consensus 153 l~~ltk~lA~ela--~-~IrVN~I~PG~i~-t~~~~~~---~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~V 225 (247)
T 3ged_A 153 IVALTHALAMSLG--P-DVLVNCIAPGWIN-VTEQQEF---TQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIV 225 (247)
T ss_dssp HHHHHHHHHHHHT--T-TSEEEEEEECSBC-CCC---C---CHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHHHHHC--C-CCEEEEEecCcCC-CCCcHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 9999999998853 2 6788999888664 4443222 2222333333 24578999998888876431 234445
Q ss_pred chhh
Q psy612 305 SGEL 308 (1005)
Q Consensus 305 ~~~~ 308 (1005)
+|.+
T Consensus 226 DGG~ 229 (247)
T 3ged_A 226 DGGM 229 (247)
T ss_dssp STTG
T ss_pred CcCH
Confidence 5544
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=265.07 Aligned_cols=218 Identities=12% Similarity=0.052 Sum_probs=174.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++. .++.+.++.+++||++|+++++++++++.++||+|
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~---~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA---IAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999766655443433443 34447788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|+ +.+.||++||+++..+.++++.|+++|+
T Consensus 105 DiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~-----~~G~IInisS~~~~~~~~~~~~Y~asKa 178 (273)
T 4fgs_A 105 DVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA-----RGSSVVLTGSTAGSTGTPAFSVYAASKA 178 (273)
T ss_dssp EEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-----EEEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh-----hCCeEEEEeehhhccCCCCchHHHHHHH
Confidence 99999999987 88999999999999999999999999999999863 2478999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cch----hhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNE----QTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~----~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|......+... ... ..+...+...+. .-+|+|...++..+++
T Consensus 179 av~~ltr~lA~Ela--~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaS 253 (273)
T 4fgs_A 179 ALRSFARNWILDLK--DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLAS 253 (273)
T ss_dssp HHHHHHHHHHHHTT--TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999998865 5567889999887754332211 000 011122333333 3467888877776654
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=258.56 Aligned_cols=216 Identities=15% Similarity=0.090 Sum_probs=175.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.. ++..+++++.|.++.+++||++|++++++++ ++|+|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~-----~~g~i 80 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSF-----TDAGF 80 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSS-----TTTCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHH-----HhCCC
Confidence 6999999999999999999999999998766654432 5677888888999999999999998887665 35899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|+++++|+++|+|++ +.+.++||++||+++..|.++++.|+++|+
T Consensus 81 DiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~--~g~~G~IVnisS~~~~~g~~~~~~Y~asKa 157 (247)
T 4hp8_A 81 DILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLA--KGRSGKVVNIASLLSFQGGIRVPSYTAAKH 157 (247)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hCCCcEEEEEechhhCCCCCCChHHHHHHH
Confidence 99999999988 889999999999999999999999999999999853 335689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|..... ...+...+...+. .-+|+|...++..+.+
T Consensus 158 av~~ltr~lA~Ela--~~gIrVNaV~PG~i~-T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS 227 (247)
T 4hp8_A 158 GVAGLTKLLANEWA--AKGINVNAIAPGYIE-TNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSS 227 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEeeCCCC-CcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999988865 456788899888774 44543211 1112223333333 3367888777766543
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-29 Score=278.75 Aligned_cols=292 Identities=16% Similarity=0.158 Sum_probs=214.6
Q ss_pred cEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 464 LIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 464 ~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++.|+|+++.+|.. .+.++||+.+. .++ .|- ...+||..+
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--------~~~-~~i------------------------------~~~~Gi~~r 42 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--------TSD-EWI------------------------------VTRTGIRER 42 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--------CCH-HHH------------------------------HHHHCCCEE
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--------CCH-HHH------------------------------HHHhCceEE
Confidence 37899999999985 56778775431 111 110 012344443
Q ss_pred hhc-cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCc
Q psy612 543 EAE-RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPV 620 (1005)
Q Consensus 543 ea~-~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps 620 (1005)
... ..++.++++++++++||+|||++++++. +|++|+...++. ...+++++++.||++ ||+
T Consensus 43 ~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id----~vi~g~~~~~~~-------------~~~~a~~v~~~lgl~~~~~ 105 (317)
T 1hnj_A 43 HIAAPNETVSTMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHA-------------FPSAACQIQSMLGIKGCPA 105 (317)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCS-------------SSCHHHHHHHHHTCCSSCE
T ss_pred EecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CCcHHHHHHHHhCCCCCeE
Confidence 322 4578899999999999999999887765 788887654321 124789999999998 999
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEc
Q psy612 621 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 700 (1005)
Q Consensus 621 ~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk 700 (1005)
++|+++|+|++.||++|+++|++|+||.+||+|++.+ ++. +. |+...+|+++|||++++||+
T Consensus 106 ~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~vL~ 167 (317)
T 1hnj_A 106 FDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CD-------PTDRGTIIIFGDGAGAAVLA 167 (317)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SC-------TTCHHHHTTBCCEEEEEEEE
T ss_pred EeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh-ccc----------CC-------chhcccceeeccccEEEEEE
Confidence 9999999999999999999999999999999999962 221 11 23344699999999999999
Q ss_pred ccchhhcCCCceEEEEEEe-eeccCCCC-----------CCCCCCCHH--------HHHHHHHHHHHHcCCCCCCccEEE
Q psy612 701 RLSRALSDGDPIHAIIRGS-GINYDGKT-----------NGITAPNGI--------SQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 701 ~l~~A~~~g~~I~avI~g~-~~~~dG~~-----------~~~~~p~~~--------~q~~~i~~al~~agi~~~~I~yve 760 (1005)
+.++ ++|++++.++ +...|... ..+..+++. .+.++|+++|+++|++|+||+||+
T Consensus 168 ~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~ 242 (317)
T 1hnj_A 168 ASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLV 242 (317)
T ss_dssp EESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred ecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 8753 4688887653 22222211 011224455 789999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
+|++||+++| ++.+.|+-... .+.++|+++||+.+|++...|..++ +.+.+.|
T Consensus 243 ~H~~~~~~~d-----~i~~~lg~~~~-----~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~~-------------- 295 (317)
T 1hnj_A 243 PHQANLRIIS-----ATAKKLGMSMD-----NVVVTLDRHGNTSAASVPCALDEAV---RDGRIKP-------------- 295 (317)
T ss_dssp ECCSCHHHHH-----HHHHHTTCCGG-----GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSCT--------------
T ss_pred EcCCCHHHHH-----HHHHHcCCCHH-----HhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCCC--------------
Confidence 9999998766 46677764321 2347899999999999999887663 3332211
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++.+||.|.+-+.++|+
T Consensus 296 -------------------G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 296 -------------------GQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp -------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCEEEEEEEchhheeEEEEEE
Confidence 124578899999999998886
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=275.48 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=191.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Cccccccc
Q psy612 548 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTA 626 (1005)
Q Consensus 548 dpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~ta 626 (1005)
++..+++++++++||+|||+++++++ +|++|+..+++. .+ .++.++++.||++| |+++|+++
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id----~v~~~~~~~~~~------------~~-~~a~~v~~~lgl~~~~~~~v~~~ 110 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD----LIILATLTPQKR------------FP-STACLVQAQLKAKGVYAFDISAA 110 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSCSSS------------SS-CHHHHHHHHHTCTTCEEEEEECG
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------CC-cHHHHHHHHhCCCCceEEecCcc
Confidence 67899999999999999999987776 899987654321 11 26899999999999 99999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||++|++.|++|+||.+||+|++.+.. .+ .|+...+|+++|||++++||++.+++
T Consensus 111 C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~-----------~~-------~~~~~~~~~~~gdGaaA~vL~~~~~~- 171 (309)
T 2ebd_A 111 CSGFIYALDIADSFIKSGKAKNVLVIGAEKLSE-----------AV-------DWEDRSTCVLFGDGAGAVVVTRSEDK- 171 (309)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-----------TC-------CTTCTTTTTTBCEEEEEEEEEECSSS-
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEEEeccccc-----------cc-------CccchhhccccccccEEEEEEecCCC-
Confidence 999999999999999999999999999997421 11 13446789999999999999988764
Q ss_pred cCCCceEEEEEEeeeccCCCC-CCCCCC-------CHH--------HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 707 SDGDPIHAIIRGSGINYDGKT-NGITAP-------NGI--------SQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 707 ~~g~~I~avI~g~~~~~dG~~-~~~~~p-------~~~--------~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
..|++++ +++||.. ..++.| ++. .+.++++++|+++|++|+||+||++|++||++.|
T Consensus 172 ---~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~ 244 (309)
T 2ebd_A 172 ---SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIIN 244 (309)
T ss_dssp ---CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHH
T ss_pred ---CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHH
Confidence 3466654 3445532 123334 454 7889999999999999999999999999998654
Q ss_pred HHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccc
Q psy612 771 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 850 (1005)
Q Consensus 771 ~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~ 850 (1005)
++.+.|+-... .+ -++|+++||+.+|+++.+|.+++. .+.+.|
T Consensus 245 -----~~~~~lg~~~~---~~--~~~~~~~Gh~~~As~~~~L~~~~~---~g~~~~------------------------ 287 (309)
T 2ebd_A 245 -----ALAEKLNIPKE---KV--FVNIQKYGNTSAASIPIALHEAIK---EGKVKR------------------------ 287 (309)
T ss_dssp -----HHHHHTTCCGG---GB--CCCHHHHCBCGGGHHHHHHHHHHH---TTCCCT------------------------
T ss_pred -----HHHHHhCCCHH---Hh--hhhHhhhcchHHHHHHHHHHHHHH---cCCCCC------------------------
Confidence 46677764321 12 367999999999999999988743 232211
Q ss_pred ccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 851 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 851 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++.+||.|.+.+.++|+
T Consensus 288 ---------G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 288 ---------GDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ---------TCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCEEEEEEEchhhhhEEEEEE
Confidence 134678999999999999986
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=251.43 Aligned_cols=210 Identities=13% Similarity=0.092 Sum_probs=165.7
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
-++|++|||||++|||+++|+.|+++|++++++.++.+..+ +..+.++..++||++|++++++++ ++||+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~------~~~~~~~~~~~~Dv~~~~~v~~~~----~~~g~ 78 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH------APRHPRIRREELDITDSQRLQRLF----EALPR 78 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT------SCCCTTEEEEECCTTCHHHHHHHH----HHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh------hhhcCCeEEEEecCCCHHHHHHHH----HhcCC
Confidence 47999999999999999999999999998776665544322 123568999999999999988776 45899
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ++.+++.++|++++++|+.|+++++|+++|+|++ +.++||++||+++..|.++++.|+++|
T Consensus 79 iDiLVNNAGi~~---~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~----~~G~IVnisS~~~~~~~~~~~~Y~asK 151 (242)
T 4b79_A 79 LDVLVNNAGISR---DREEYDLATFERVLRLNLSAAMLASQLARPLLAQ----RGGSILNIASMYSTFGSADRPAYSASK 151 (242)
T ss_dssp CSEEEECCCCCC---GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred CCEEEECCCCCC---CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH----cCCeEEEEeeccccCCCCCCHHHHHHH
Confidence 999999999854 5778999999999999999999999999999753 248999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|..... +..+...+...+. .-+|+|...++..+++
T Consensus 152 aav~~ltr~lA~Ela--~~gIrVNaV~PG~i~-T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS 222 (242)
T 4b79_A 152 GAIVQLTRSLACEYA--AERIRVNAIAPGWID-TPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCG 222 (242)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEEeCCCC-ChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999998865 456788899888764 44543221 1222333444443 3468888777766554
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=251.14 Aligned_cols=225 Identities=11% Similarity=0.059 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.+.++.++.||++|+++++++++++.++ |+|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i 84 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL 84 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence 5799999999999999999999999997666655556678888888888889999999999999999999999998 999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. +.++||++||+++..+.++++.|+++|+
T Consensus 85 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asKa 160 (252)
T 3h7a_A 85 EVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH---GQGKIFFTGATASLRGGSGFAAFASAKF 160 (252)
T ss_dssp EEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred eEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence 99999999987 7889999999999999999999999999999997642 4589999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceE-EEEeCCcccCcccccccchhh-hHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKL-ITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~-~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
++.+|++.++.+.. ..++++ .+|.+|.+ .+.|........ ............++++.++.+..++..+..
T Consensus 161 a~~~l~~~la~e~~--~~gi~v~n~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 161 GLRAVAQSMARELM--PKNIHVAHLIIDSGV-DTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHhh--hcCCEEEEEecCCcc-CChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCchh
Confidence 99999999988754 345688 78887766 444543221111 111122223368999999999998876543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=253.44 Aligned_cols=223 Identities=14% Similarity=0.113 Sum_probs=179.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..+++.++++..+.++.++.||++|+++++++++++.+++|+|
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999976665544455677778888888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 83 D~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~IV~isS~~~~~~~~~~~~Y~asKa 158 (264)
T 3tfo_A 83 DVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEA---QRSGQIINIGSIGALSVVPTAAVYCATKF 158 (264)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCeEEEEEcCHHHcccCCCChhHHHHHH
Confidence 99999999987 788999999999999999999999999999999754 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++.+|++.++.+. . ++++.+|.+|... +.|........ ..........+++++|.++.+..++..+.
T Consensus 159 al~~l~~~la~e~---~-gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 159 AVRAISDGLRQES---T-NIRVTCVNPGVVE-SELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp HHHHHHHHHHHHC---S-SEEEEEEEECCC------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHhC---C-CCEEEEEecCCCc-CcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCc
Confidence 9999999998873 1 5688899887664 44532211110 00111111225789999999999887664
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=277.08 Aligned_cols=295 Identities=16% Similarity=0.135 Sum_probs=213.1
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
..++.|+||++.+|.. .+.++||+.+.. + ++|-. .++||.
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~--------~-~~~i~------------------------------~~~Gi~ 49 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDS--------T-EEWIE------------------------------TRTGIR 49 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSC--------C-HHHHH------------------------------HHHCCS
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCC--------C-HHHHH------------------------------HhcCce
Confidence 3569999999999985 567888865421 1 11210 123344
Q ss_pred hhhhc-cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-C
Q psy612 541 PLEAE-RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G 618 (1005)
Q Consensus 541 ~~ea~-~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G 618 (1005)
.+... ..++.++++++++++||+|||++++++. +|++|+..+++. . ...++++++.||++ +
T Consensus 50 ~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~gt~~~~~~--------~-----p~~a~~v~~~lgl~~~ 112 (339)
T 1mzj_A 50 SRRIAEPDETIQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVH--------T-----PPLSVAIAHELGADNA 112 (339)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCC--------S-----SCHHHHHHHHHTCTTC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC--------C-----ChHHHHHHHHhCCCCc
Confidence 43322 2567899999999999999999987776 789987655431 1 12678999999998 7
Q ss_pred CcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEE
Q psy612 619 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVV 698 (1005)
Q Consensus 619 ps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vv 698 (1005)
|+++|+++|+|++.||++|+++|++|+||.+||+|++.+ ++. +. ++...+|+++|||++++|
T Consensus 113 ~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~v 174 (339)
T 1mzj_A 113 GGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID-------LADRSLSFLFGDGAGAAV 174 (339)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC-------SSCTTTTTTBCEEEEEEE
T ss_pred cEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC-------ccccccceEeccCceEEE
Confidence 999999999999999999999999999999999999974 332 11 223578999999999999
Q ss_pred EcccchhhcCCCceEEEE-EEeeeccCCCCC-CCCCC---------------CH--------HHHHHHHHHHHHHcCCCC
Q psy612 699 LKRLSRALSDGDPIHAII-RGSGINYDGKTN-GITAP---------------NG--------ISQTELIKSVYKKSNLNP 753 (1005)
Q Consensus 699 Lk~l~~A~~~g~~I~avI-~g~~~~~dG~~~-~~~~p---------------~~--------~~q~~~i~~al~~agi~~ 753 (1005)
|++.+. ++|++.. .+.+...|.... +. .| ++ ..+.++|+++|+++|+++
T Consensus 175 L~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~-~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~ 248 (339)
T 1mzj_A 175 VGPSDV-----PGIGPVVRGIDGTGLGSLHMSSS-WDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTV 248 (339)
T ss_dssp EEEESS-----CCBCCCEEEECGGGGGGEEESCC-HHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG
T ss_pred EEecCC-----CCeEEEEEEEcCCCCCeEEecCC-CCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 998753 4566542 222222221110 00 12 22 678899999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCc
Q psy612 754 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 833 (1005)
Q Consensus 754 ~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 833 (1005)
+||+||++|++||+++|. +.+.|+-.. ...+. .+ ..++||+.+|++...|.+++ +.+.+.|
T Consensus 249 ~did~v~~H~~~~~~~d~-----i~~~lg~~~--~~~~~-~~-~~~~Gn~~sAs~~~~L~~~~---~~g~~~~------- 309 (339)
T 1mzj_A 249 GDLVAFVPHQANLRIIDV-----LVDRLGVPE--HVVVS-RD-AEDTGNTSSASVALALDRLV---RSGAVPG------- 309 (339)
T ss_dssp GGCSEEEECCSCHHHHHH-----HHHHHTCCT--TSEEC-CT-HHHHCBCTTHHHHHHHHHHH---HHTSSCT-------
T ss_pred HHCCEEEECCCCHHHHHH-----HHHHhCCCc--cceee-eh-hhhcCchHHHHHHHHHHHHH---HcCCCCC-------
Confidence 999999999999998875 456665422 10232 33 46899999999999887764 4442211
Q ss_pred ccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 834 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 834 n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+.++.+||.|++.+.++|+-
T Consensus 310 --------------------------G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 310 --------------------------GGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp --------------------------TCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------------------CCEEEEEEEchhheeEEEEEEe
Confidence 1346789999999999999974
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-26 Score=248.67 Aligned_cols=225 Identities=15% Similarity=0.093 Sum_probs=181.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC------------C-CchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR------------S-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 133 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r------------~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 133 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++ + +..++..+.++..+.++.++.+|++|+++++
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 68999999999999999999999999977666542 2 2334556667777889999999999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy612 134 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 134 ~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~ 213 (1005)
++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||+++..
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~ 170 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEA--GNGGSIVVVSSSAGLK 170 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCCCEEEEEcchhhcc
Confidence 999999999999999999999987 7889999999999999999999999999999998542 2368899999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--------hhhhH---HHHhcCCCCCC
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--------EQTDF---YFKSSKQKVLH 282 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--------~~~~~---~~~~~g~~~l~ 282 (1005)
+.++++.|+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|..... ..... .......+..+
T Consensus 171 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 247 (280)
T 3pgx_A 171 ATPGNGHYSASKHGLTALTNTLAIELG--EYGIRVNSIHPYSVE-TPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMT 247 (280)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-STTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeCccc-CcccchhhhhhhhhcCchhhhhhhhcccCCCCCCC
Confidence 999999999999999999999888743 345688999988774 34432110 00000 00111224568
Q ss_pred HHHHHHHHHHHHhcc
Q psy612 283 ENDGLKLFEQLLIQD 297 (1005)
Q Consensus 283 ~~~~~~~l~~~l~~~ 297 (1005)
++|.++.+..++...
T Consensus 248 p~dvA~~v~~L~s~~ 262 (280)
T 3pgx_A 248 ADEVADVVAWLAGDG 262 (280)
T ss_dssp HHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHhCcc
Confidence 999999988877543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=244.85 Aligned_cols=225 Identities=13% Similarity=0.068 Sum_probs=185.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++|++|||||++|||+++|+.|+++|++++++.+|+. ..++..+++++.+.++.++.+|++|+++++++++++.+++|
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999998887766664 45666777887888999999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +.+.++||++||+++..+.++++.|+++
T Consensus 82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~---~~~~g~iv~isS~~~~~~~~~~~~Y~as 157 (258)
T 3oid_A 82 RLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLME---KNGGGHIVSISSLGSIRYLENYTTVGVS 157 (258)
T ss_dssp CCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH---TTTCEEEEEEEEGGGTSBCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---hcCCcEEEEECchhhCCCCCCcHHHHHH
Confidence 9999999999877 78899999999999999999999999999999964 3456899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh---hhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++..|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..+++|..+.+..++...
T Consensus 158 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~ 231 (258)
T 3oid_A 158 KAALEALTRYLAVELS--PKQIIVNAVSGGAID-TDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK 231 (258)
T ss_dssp HHHHHHHHHHHHHHTG--GGTEEEEEEEECCBC-SGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSST
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEeeCCCc-ChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999988753 345688899887764 4443322111 1112222222 3568899999888877543
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-26 Score=247.67 Aligned_cols=225 Identities=14% Similarity=0.092 Sum_probs=180.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC------------C-CchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR------------S-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 133 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r------------~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 133 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++ + +..++..+.++..+.++.++.+|++|+++++
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 58999999999999999999999999976665542 1 2234455566677889999999999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy612 134 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 134 ~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~ 213 (1005)
++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||+++..
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEG--GRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc--CCCCEEEEEccHhhCC
Confidence 999999999999999999999987 7889999999999999999999999999999998542 2357999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCCCCC
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQKVL 281 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~~~l 281 (1005)
+.+++..|+++|+++..|++.++.+.. ..++++.+|.+|... +.|.... .............+..
T Consensus 167 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~ 243 (277)
T 3tsc_A 167 MQPFMIHYTASKHAVTGLARAFAAELG--KHSIRVNSVHPGPVN-TPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVA 243 (277)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-SGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCB
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEEeCCCc-CCcccchhhhhhhhcccccHHHHHHhhhccCCCCC
Confidence 999999999999999999999988753 345688999988764 4443210 0000000011112456
Q ss_pred CHHHHHHHHHHHHhcc
Q psy612 282 HENDGLKLFEQLLIQD 297 (1005)
Q Consensus 282 ~~~~~~~~l~~~l~~~ 297 (1005)
+++|..+.+..++...
T Consensus 244 ~pedvA~~v~~L~s~~ 259 (277)
T 3tsc_A 244 EPEDIADTVCWLASDE 259 (277)
T ss_dssp CHHHHHHHHHHHHSGG
T ss_pred CHHHHHHHHHHHhCcc
Confidence 8999999988877543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-26 Score=245.58 Aligned_cols=227 Identities=15% Similarity=0.092 Sum_probs=182.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|++|+++|++++++.++.+..++..+++++.+.++.++++|++|+++++++++++.+++|+|
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999976555444455566777777778899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|.+ ....++||++||+++..+.+++..|+++|+
T Consensus 85 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 161 (257)
T 3imf_A 85 DILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIE--KGIKGNIINMVATYAWDAGPGVIHSAAAKA 161 (257)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--hCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence 99999999887 788999999999999999999999999999999743 334689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.+|++.++.+.. ...++++.+|.+|.+...++... .........+...+ +..+++|..+.+..++...
T Consensus 162 a~~~l~~~la~e~~-~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 235 (257)
T 3imf_A 162 GVLAMTKTLAVEWG-RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDE 235 (257)
T ss_dssp HHHHHHHHHHHHHH-HHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhc-cccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999886632 02246899999988765433211 01111122222222 3458899999888877543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=241.81 Aligned_cols=223 Identities=16% Similarity=0.179 Sum_probs=180.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|++|+++|++++++.++.+..+++.++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999876655544445566667777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. . ++||++||+++..+.+++..|+++|+
T Consensus 86 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~-g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (247)
T 2jah_A 86 DILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---K-GTVVQMSSIAGRVNVRNAAVYQATKF 160 (247)
T ss_dssp SEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC---C-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence 99999999986 7788899999999999999999999999999997542 3 89999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHHHHhc--CCCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSS--KQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~--g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|..... .......... .+...++++..+.+..++..+
T Consensus 161 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 161 GVNAFSETLRQEVT--ERGVRVVVIEPGTTD-TELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSBS-SSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEECCCCC-CcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhCCC
Confidence 99999999887743 345688899888764 44532211 1111111111 111378999999998887654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=247.86 Aligned_cols=222 Identities=14% Similarity=0.141 Sum_probs=184.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+++. ..+++.++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999998877776553 445667777778889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.+++..|+++|
T Consensus 107 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK 182 (269)
T 4dmm_A 107 LDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLK---QRSGRIINIASVVGEMGNPGQANYSAAK 182 (269)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEECchhhcCCCCCchhHHHHH
Confidence 999999999987 788999999999999999999999999999999754 2467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+|++.++.+.. ..++++.+|.+|.+. +.|...... ........+ +..+++|..+.+..++..+
T Consensus 183 ~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~--~~~~~~~p~~r~~~~~dvA~~v~~l~s~~ 250 (269)
T 4dmm_A 183 AGVIGLTKTVAKELA--SRGITVNAVAPGFIA-TDMTSELAA--EKLLEVIPLGRYGEAAEVAGVVRFLAADP 250 (269)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECCBT-TSCSCHHHH--HHHGGGCTTSSCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEEECCCc-CcccccccH--HHHHhcCCCCCCCCHHHHHHHHHHHhCCc
Confidence 999999999888743 345688999988764 455432111 112222222 3567899999988888753
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=244.79 Aligned_cols=222 Identities=12% Similarity=0.080 Sum_probs=181.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+.++.++.+|++|+++++++++++.+++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999986666555555667777888888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++ +.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 91 d~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKa 165 (256)
T 3gaf_A 91 TVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK---AGGGAILNISSMAGENTNVRMASYGSSKA 165 (256)
T ss_dssp CEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEcCHHHcCCCCCchHHHHHHH
Confidence 99999999987 6667 8999999999999999999999999999753 35689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++|++.++.+.. ..++++.+|.+|.... .|.... ............+ +..+++|..+.+..++..
T Consensus 166 a~~~~~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~ 235 (256)
T 3gaf_A 166 AVNHLTRNIAFDVG--PMGIRVNAIAPGAIKT-DALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSP 235 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-HHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHh--hhCcEEEEEEEccccC-chhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999988743 3456888999887654 332211 1111111222222 245788998888887653
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=250.76 Aligned_cols=229 Identities=14% Similarity=0.144 Sum_probs=185.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..++++..+.++.++.||++|.++++++++++.+++|+|
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999875555544455667777888888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||+++..+.++++.|+++|+
T Consensus 110 d~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKa 186 (301)
T 3tjr_A 110 DVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ--GTGGHIAFTASFAGLVPNAGLGTYGVAKY 186 (301)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence 99999999987 7889999999999999999999999999999997542 23689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh----------HHHH--hcCCCCCCHHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD----------FYFK--SSKQKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~----------~~~~--~~g~~~l~~~~~~~~l~~~l 294 (1005)
+++.|++.++.+.. ..++++.+|.+|.+. +.|......... ..+. ......++++++++.+..++
T Consensus 187 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l 263 (301)
T 3tjr_A 187 GVVGLAETLAREVK--PNGIGVSVLCPMVVE-TKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI 263 (301)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEECCSCCC-SSHHHHHHHHC----------------------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEECCccc-cccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHH
Confidence 99999999888743 345688999887764 444321110000 0000 01123578999999999998
Q ss_pred hccchhh
Q psy612 295 IQDKIQY 301 (1005)
Q Consensus 295 ~~~~~~~ 301 (1005)
..+...+
T Consensus 264 ~~~~~~i 270 (301)
T 3tjr_A 264 LANRLYI 270 (301)
T ss_dssp HHTCSEE
T ss_pred hcCCeEE
Confidence 8776433
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-26 Score=246.20 Aligned_cols=225 Identities=16% Similarity=0.109 Sum_probs=181.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+ .++.++++|++|+++++++++++.+++|+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999999976555544455566777787776 68999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++. .+.++++.|+++
T Consensus 89 id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~~Y~as 164 (262)
T 3pk0_A 89 IDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIA---SGSGRVVLTSSITGPITGYPGWSHYGAT 164 (262)
T ss_dssp CSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HSSCEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEechhhccCCCCCChhhHHH
Confidence 999999999987 788999999999999999999999999999999754 246889999999996 788999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++..|++.++.+.. ..++++.+|.+|......+............+...+ +..+++|..+.+..++...
T Consensus 165 K~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~ 236 (262)
T 3pk0_A 165 KAAQLGFMRTAAIELA--PHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKE 236 (262)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHH--hhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999988744 345688999988775433322111111122222222 2457899988888777543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=242.97 Aligned_cols=223 Identities=13% Similarity=0.148 Sum_probs=182.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+++ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999887777765 4456677778888889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK 158 (246)
T 3osu_A 83 LDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR---QRSGAIINLSSVVGAVGNPGQANYVATK 158 (246)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 999999999987 778899999999999999999999999999999754 2468999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.+|++.++.+.. ..++++.+|.+|.+. +.|....... .........+ +..+++|..+.+..++..
T Consensus 159 ~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~ 228 (246)
T 3osu_A 159 AGVIGLTKSAARELA--SRGITVNAVAPGFIV-SDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASD 228 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBG-GGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEECCCc-CCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999887643 335688899888764 4443322221 1112222222 235788888888776653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-26 Score=249.23 Aligned_cols=223 Identities=12% Similarity=0.096 Sum_probs=181.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.+.++.++.+|++|+++++++++++.+++|+|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999976655554455666777777778889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 107 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKa 182 (270)
T 3ftp_A 107 NVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK---ARGGRIVNITSVVGSAGNPGQVNYAAAKA 182 (270)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCCEEEEECchhhCCCCCCchhHHHHHH
Confidence 99999999987 788899999999999999999999999999999754 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH-HHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++..|++.++.+.. ..++++.+|.+|.+. +.|.......... ......+ +..++++..+.+..++..
T Consensus 183 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 251 (270)
T 3ftp_A 183 GVAGMTRALAREIG--SRGITVNCVAPGFID-TDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASP 251 (270)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHh--hhCeEEEEEEeCCCc-CcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999888743 334688899887664 4443322211111 1111222 245889999988887753
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=243.37 Aligned_cols=227 Identities=11% Similarity=0.105 Sum_probs=183.1
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
....++|++|||||++|||+++|++|+++|++++++.+|+ +...+..+++++.+.++.++.+|++|.++++++++++.+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999877777554 455666777777888899999999999999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+.++++.|
T Consensus 88 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y 163 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER---GWGRIINISSVNGQKGQFGQTNY 163 (256)
T ss_dssp HTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCCCGGGSCSCCHHH
T ss_pred hcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEEcchhhccCCCCCccc
Confidence 9999999999999987 7788999999999999999999999999999997542 45889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|++++.|++.++.+.. ..++++.+|.+|.+. +.|...... ..........+ ...++++..+.+..++..
T Consensus 164 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 237 (256)
T 3ezl_A 164 STAKAGIHGFTMSLAQEVA--TKGVTVNTVSPGYIG-TDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 237 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHH--HhCCEEEEEEECccc-CccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 9999999999999888743 345688899988774 444332221 11222222222 345788888888877653
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=249.66 Aligned_cols=229 Identities=11% Similarity=0.022 Sum_probs=177.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+.+ ..+.+++||++|+++++++++++.+++|+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999976555544455566666666544 34589999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++. ....++||++||+++..+.+++..|+++|
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~~~g~IV~isS~~~~~~~~~~~~Y~asK 190 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQ-TPRGGRIINNGSISAQTPRPNSAPYTATK 190 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHS-SSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCcEEEEECCHHhCCCCCCChhHHHHH
Confidence 99999999987534789999999999999999999999999999997542 11368999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-HhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++++|++.++.+.. ..++++.+|.+|.+. +.|............ .....+..+++|.++.+..++..+..
T Consensus 191 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 191 HAITGLTKSTALDGR--MHDIACGQIDIGNAA-TDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEEECBC-C-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEECcCc-ChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 999999999887743 345688889887664 444332111100000 01112357899999999998876643
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=249.55 Aligned_cols=232 Identities=15% Similarity=0.145 Sum_probs=182.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC--cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN--KAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~--~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++..+. ++.++.+|++|++++.++++.+.+.+|
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999755555544556667777766655 899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHH---hcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL---QKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~---~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. .....++||++||+++..+.++++.|
T Consensus 87 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y 165 (319)
T 3ioy_A 87 PVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165 (319)
T ss_dssp CEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHH
T ss_pred CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHH
Confidence 9999999999987 7889999999999999999999999999999998653 12346899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH--------------HHHhcCCCCCCHHHHH
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF--------------YFKSSKQKVLHENDGL 287 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~--------------~~~~~g~~~l~~~~~~ 287 (1005)
+++|+++.+|++.++.+.. ..++++++|++|.+. +.|.......... .+.......++++++.
T Consensus 166 ~aSKaal~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA 242 (319)
T 3ioy_A 166 NTTKFAVRGLSESLHYSLL--KYEIGVSVLCPGLVK-SYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCCEEEEEEcCeEc-cCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence 9999999999998877643 335689999988775 4443221110000 0000011127899999
Q ss_pred HHHHHHHhccchhhh
Q psy612 288 KLFEQLLIQDKIQYL 302 (1005)
Q Consensus 288 ~~l~~~l~~~~~~~~ 302 (1005)
+.+..++..+...++
T Consensus 243 ~~~~~al~~~~~~i~ 257 (319)
T 3ioy_A 243 ARVIEAMKANRLHIF 257 (319)
T ss_dssp HHHHHHHHTTCSEEC
T ss_pred HHHHHHHHcCCCEEE
Confidence 999998887764433
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=247.50 Aligned_cols=227 Identities=12% Similarity=0.108 Sum_probs=178.0
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+..+|++|||||++|||+++|+.|+++|++++++.++.+..++..++++..+.++.++.||++|+++++++++++.++
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999997655554445566777788888889999999999999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHH--HHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN--TILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~--~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++| .|++ ...++||++||+++..+.++++.
T Consensus 99 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~~~g~iV~isS~~~~~~~~~~~~ 174 (279)
T 3sju_A 99 FGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMRE---AGWGRIVNIASTGGKQGVMYAAP 174 (279)
T ss_dssp HCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHH---HTCEEEEEECCGGGTSCCTTCHH
T ss_pred cCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhh---cCCcEEEEECChhhccCCCCChh
Confidence 999999999999987 78899999999999999999999999999999 4432 24689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCC-CCCCHHHHH
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGL 287 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~~~~ 287 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+++|..
T Consensus 175 Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 251 (279)
T 3sju_A 175 YTASKHGVVGFTKSVGFELA--KTGITVNAVCPGYVE-TPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA 251 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEESSBC-SHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--hhCcEEEEEeeCccc-chHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHH
Confidence 99999999999999988754 345688899887664 3342210 0111111111122 235788888
Q ss_pred HHHHHHHhc
Q psy612 288 KLFEQLLIQ 296 (1005)
Q Consensus 288 ~~l~~~l~~ 296 (1005)
+.+..++..
T Consensus 252 ~~v~~L~s~ 260 (279)
T 3sju_A 252 GLVGYLVTD 260 (279)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHHhCc
Confidence 887776543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=246.04 Aligned_cols=227 Identities=15% Similarity=0.183 Sum_probs=170.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+|+ +..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999877776555 3445667777777889999999999999999999999999999
Q ss_pred ccEEEEcCcc--cCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 146 IDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 146 idgvIh~AG~--~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
||+||||||+ .. ..++.+.+.++|++++++|+.|++++.++++|+|++......++||++||+++..+.+++..|++
T Consensus 108 iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 186 (280)
T 4da9_A 108 IDCLVNNAGIASIV-RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM 186 (280)
T ss_dssp CCEEEEECC-------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred CCEEEECCCccccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence 9999999998 34 57789999999999999999999999999999987544344689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHH--hcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK--SSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~--~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|+++.+|++.++.+.. ..++++.+|.+|.+. +.|............. ... -+..+++|..+.+..++...
T Consensus 187 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 260 (280)
T 4da9_A 187 SKAGLAAFSQGLALRLA--ETGIAVFEVRPGIIR-SDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ 260 (280)
T ss_dssp HHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-C----------------------CCBCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHH--HhCcEEEEEeecCCc-CCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCcc
Confidence 99999999999988743 445688999988764 4443322111111111 111 12357899999888877643
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=250.15 Aligned_cols=226 Identities=15% Similarity=0.129 Sum_probs=183.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCc--EEEEecCC-CchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYST--NLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~--~vil~~r~-~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.+|++|||||++|||+++|+.|+++|+. +|++++|+ +..+++.++++.. +.++.++.||++|+++++++++++.+
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999982 56666665 4456666677654 67899999999999999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.++++.|
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~IV~isS~~~~~~~~~~~~Y 188 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQA---KNSGDIVNLGSIAGRDAYPTGSIY 188 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCGGGTSCCTTCHHH
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeEEEECChhhcCCCCCCchH
Confidence 99999999999998653567889999999999999999999999999999754 246899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|..... .............+++++|.++.+..++..+.
T Consensus 189 ~asKaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~ 264 (287)
T 3rku_A 189 CASKFAVGAFTDSLRKELI--NTKIRVILIAPGLVE-TEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQ 264 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TSSCEEEEEEESCEE-SSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCCEEEEEeCCcCc-CccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCC
Confidence 9999999999999988854 455689999988775 34421100 00111111233457799999999998887554
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=242.12 Aligned_cols=222 Identities=16% Similarity=0.131 Sum_probs=176.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++ +.|+ +..++..+++ +.++.+++||++|+++++++++++.+++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIV-SDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 5799999999999999999999999997555 4554 3333333333 778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. ...++||++||.++..+.++++.|+++|
T Consensus 81 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 81 IDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAA--GKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCcEEEEECchhhccCCCCchhhHHHH
Confidence 999999999987 7889999999999999999999999999999998642 2368999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHh-cCC-CCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+|++.++.+.. ..++++.+|.+|.+....+.............. ..+ +..++++..+.+..++...
T Consensus 158 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~ 229 (247)
T 3rwb_A 158 GGVIGFTRALATELG--KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence 999999999988753 345688999988775433221111111111111 222 3457899998888776543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=241.96 Aligned_cols=220 Identities=12% Similarity=0.187 Sum_probs=176.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.++++|++|+++++++++++.+++|++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999997665544434344444444 3457889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 85 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (248)
T 3op4_A 85 DILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMK---KRQGRIINVGSVVGTMGNAGQANYAAAKA 160 (248)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence 99999999987 788999999999999999999999999999999754 24688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|....... .......... +..+++|..+.+..++..
T Consensus 161 a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 229 (248)
T 3op4_A 161 GVIGFTKSMAREVA--SRGVTVNTVAPGFIE-TDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 229 (248)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBS-STTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHH--HhCeEEEEEeeCCCC-CchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 99999999888743 345688899887664 4453322211 1112222222 346889999888877653
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=246.25 Aligned_cols=224 Identities=16% Similarity=0.096 Sum_probs=180.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++...+.++.++++|++|+++++++++++.+++|+|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999976665555455667777787778899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~--g~~g~~~Yaaa 224 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++.. +.+++..|+++
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~Iv~isS~~~~~~~~~~~~~~Y~as 183 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ---RGGGAIVVVSSINGTRTFTTPGATAYTAT 183 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCSBTTTBCCSTTCHHHHHH
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCceEEEEcChhhccCCCCCCchHHHHH
Confidence 999999998753478999999999999999999999999999999754 2468999999999987 78899999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH--------HHHhcC---CCCCCHHHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF--------YFKSSK---QKVLHENDGLKLFEQL 293 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~--------~~~~~g---~~~l~~~~~~~~l~~~ 293 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.+. +.|.......... ...... -+..+++|..+.+..+
T Consensus 184 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL 260 (283)
T 3v8b_A 184 KAAQVAIVQQLALELG--KHHIRVNAVCPGAIE-TNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFL 260 (283)
T ss_dssp HHHHHHHHHHHHHHTT--TTTEEEEEEEECSBS-SCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC--ccCcEEEEEEeCCCc-CCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHH
Confidence 9999999999988753 445688899888764 4443321110000 000000 1235789999888887
Q ss_pred Hhc
Q psy612 294 LIQ 296 (1005)
Q Consensus 294 l~~ 296 (1005)
+..
T Consensus 261 ~s~ 263 (283)
T 3v8b_A 261 VSE 263 (283)
T ss_dssp TSG
T ss_pred cCc
Confidence 654
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=247.06 Aligned_cols=224 Identities=17% Similarity=0.081 Sum_probs=182.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+ .++.+++||++|+++++++++++.+++|+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999976666655566777788887776 68999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ...++||++||+++. .+.++++.|+++
T Consensus 120 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iV~isS~~~~~~~~~~~~~Y~as 195 (293)
T 3rih_A 120 LDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA---SGRGRVILTSSITGPVTGYPGWSHYGAS 195 (293)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH---HSSCEEEEECCSBTTTBBCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEEeChhhccCCCCCCHHHHHH
Confidence 999999999987 788999999999999999999999999999999754 246899999999996 889999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.+....+............+...+. ..+++|..+.+..++..
T Consensus 196 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~ 266 (293)
T 3rih_A 196 KAAQLGFMRTAAIELA--PRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATD 266 (293)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999888743 3456889999887754332111111111122222222 34788888888777654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=243.64 Aligned_cols=224 Identities=13% Similarity=0.124 Sum_probs=183.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..+++.++++..+.++.+++||++|+++++++++++.+++|+|
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999987666666667778888888888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--CCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--~g~~~Yaaa 224 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||+++..+. ++.+.|+++
T Consensus 111 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~~g~iv~isS~~~~~~~~~~~~~~Y~as 187 (276)
T 3r1i_A 111 DIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ--GLGGTIITTASMSGHIINIPQQVSHYCTS 187 (276)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEECchHhcccCCCCCcchHHHH
Confidence 99999999987 7889999999999999999999999999999997542 235889999999998775 367899999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|................+ +..+++|..+.+..++..
T Consensus 188 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~ 257 (276)
T 3r1i_A 188 KAAVVHLTKAMAVELA--PHQIRVNSVSPGYIR-TELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASA 257 (276)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-STTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEeeCCCc-CCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999888743 345688899887664 45543322211122222222 345788888888877654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=243.98 Aligned_cols=218 Identities=9% Similarity=0.023 Sum_probs=178.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-------~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+. .++..++++..+.++.+++||++|+++++++++++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999965555444332 45666677777889999999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--CCC
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFG 217 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--~~g 217 (1005)
.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| .+.+.++||++||+++..+ .++
T Consensus 85 ~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m---~~~~~g~iv~isS~~~~~~~~~~~ 160 (274)
T 3e03_A 85 VDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHL---LQAPNPHILTLAPPPSLNPAWWGA 160 (274)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHH---TTSSSCEEEECCCCCCCCHHHHHH
T ss_pred HHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHH---HhcCCceEEEECChHhcCCCCCCC
Confidence 999999999999999987 7889999999999999999999999999999995 3445789999999999888 678
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+..|+++|+++.+|++.++.+.. ..++++.+|.+|.+.++.|....... ......++++..+.+..++...
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v~PG~~v~T~~~~~~~~~-------~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFG--PQGVAINALWPRTVIATDAINMLPGV-------DAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEECSBCBCC-------CC-------CGGGSBCTHHHHHHHHHHHTSC
T ss_pred CchHHHHHHHHHHHHHHHHHHhh--hcCEEEEEEECCcccccchhhhcccc-------cccccCCHHHHHHHHHHHhCcc
Confidence 99999999999999999988754 34568999998866566664211110 0112568999999998888654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-25 Score=245.71 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=179.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC------------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 134 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~------------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~ 134 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..++..++++..+.++.+++||++|++++++
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 689999999999999999999999999877665541 22345566677778899999999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
+++++.+++|+||+||||||+.....++.+++.++|++++++|+.|+++++++++|+|++ ....++||++||+++..+
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMA--GKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEECChhhccC
Confidence 999999999999999999998872334889999999999999999999999999999743 334689999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-----------hhhH------HHHhcC
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-----------QTDF------YFKSSK 277 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-----------~~~~------~~~~~g 277 (1005)
.++++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... .... ......
T Consensus 185 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 261 (299)
T 3t7c_A 185 AENIGNYIASKHGLHGLMRTMALELG--PRNIRVNIVCPSSVA-TPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP 261 (299)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESCBS-STTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEecCCcc-CccccccchhhhhhhhhccchhhHHHHHhhhhcccC
Confidence 99999999999999999999988754 335688899887664 444321100 0000 011111
Q ss_pred CCCCCHHHHHHHHHHHHhcc
Q psy612 278 QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 278 ~~~l~~~~~~~~l~~~l~~~ 297 (1005)
.+..+++|..+.+..++...
T Consensus 262 ~r~~~pedvA~~v~fL~s~~ 281 (299)
T 3t7c_A 262 IPYVEPADISNAILFLVSDD 281 (299)
T ss_dssp CSCBCHHHHHHHHHHHHSGG
T ss_pred cCCCCHHHHHHHHHHHhCcc
Confidence 23568889888888776543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=241.27 Aligned_cols=234 Identities=13% Similarity=0.072 Sum_probs=182.6
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||+| |||+++|+.|+++|+++++..++.+..+++.+.+++.+ .++.+++|||+|+++++++++++.++|
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 689999999764 99999999999999976666555556677777777654 578999999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||++|||||+... ...+.+.+.++|+.++++|+.+++.+.+.+.+++ .+.++||++||+++..+.+++..
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~-----~~~G~IVnisS~~~~~~~~~~~~ 159 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLM-----PEGGSIVATTYLGGEFAVQNYNV 159 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC-----TTCEEEEEEECGGGTSCCTTTHH
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCCEEEEEeccccccCcccchh
Confidence 999999999998652 2456788999999999999999999999987653 24689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|+.. +.|..... ...+...+...+. .-+|+|....+..+++.
T Consensus 160 Y~asKaal~~ltr~lA~Ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd 236 (256)
T 4fs3_A 160 MGVAKASLEANVKYLALDLG--PDNIRVNAISAGPIR-TLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSD 236 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHhC--ccCeEEEEEecCCCC-ChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999998855 456688899888764 34433221 1122233333333 45788888887776643
Q ss_pred cc----hhhhhhchhh
Q psy612 297 DK----IQYLVLSGEL 308 (1005)
Q Consensus 297 ~~----~~~~v~~~~~ 308 (1005)
.. .+.+.++|.|
T Consensus 237 ~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 237 LSSGVTGENIHVDSGF 252 (256)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhcCccCCEEEECcCH
Confidence 22 2344555554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-25 Score=240.17 Aligned_cols=221 Identities=14% Similarity=0.094 Sum_probs=181.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..+++.+++++.+.++.++.+|++|+++++++++++.+++|+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999999877776665 3456667778888889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-CCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-~~g~~~Yaaa 224 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|+ +.++||++||..+..+ .++++.|+++
T Consensus 110 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-----~~g~iv~isS~~~~~~~~~~~~~Y~as 183 (271)
T 3v2g_A 110 LDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG-----DGGRIITIGSNLAELVPWPGISLYSAS 183 (271)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-----TTCEEEEECCGGGTCCCSTTCHHHHHH
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----cCCEEEEEeChhhccCCCCCchHHHHH
Confidence 999999999987 78899999999999999999999999999999852 2578999999888766 7899999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++++|++.++.+.. ..++++.+|.+|.+. +.|............+...+ +..+++|..+.+..++..
T Consensus 184 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~ 253 (271)
T 3v2g_A 184 KAALAGLTKGLARDLG--PRGITVNIVHPGSTD-TDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGP 253 (271)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhh--hhCeEEEEEecCCCc-CCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999888754 345688899888764 44543222222222232222 346789998888877653
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=265.13 Aligned_cols=267 Identities=16% Similarity=0.154 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCccccccc
Q psy612 550 RQRHLLQESWLALED-AGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~Aled-AG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~ta 626 (1005)
.+.|+++++++||+| ||+++++++ +|++|+...... ....++.++++.+|+ ++|+++|+++
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId----~vi~g~~~~~~~------------~~~~~a~~va~~lGlp~~~pa~~v~~~ 95 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS----DMILGVVSPVGD------------QGGDIARTAVLAAGLPETTGGVQLNRF 95 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE----EEEEECC--------------------CHHHHHHHHTTCCTTCEEEEEC--
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC----EEEEEecCcccc------------ccCcHHHHHHHHcCCCCCCceEEecCc
Confidence 467999999999999 999998877 788886533211 113468899999999 7899999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHH--------------------HHHHH-------------------
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------YIAMT------------------- 667 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~--------------------~~~~~------------------- 667 (1005)
|+|++.||++|+++|++|+||.+||+|++.+..... .+.+.
T Consensus 96 Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a 175 (407)
T 3svk_A 96 CASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYA 175 (407)
T ss_dssp -CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHH
Confidence 999999999999999999999999999987553110 00000
Q ss_pred -----------HcC----------------CCCCCCCCcC-------------CCCC-----------------------
Q psy612 668 -----------SAG----------------MLSPDGKCYV-------------FDER----------------------- 684 (1005)
Q Consensus 668 -----------~~~----------------~ls~~g~~~p-------------fd~~----------------------- 684 (1005)
+.| .+.||..+|+ |+..
T Consensus 176 ~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~ 255 (407)
T 3svk_A 176 LRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHV 255 (407)
T ss_dssp HHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCC
T ss_pred HHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccccccccccccccccc
Confidence 011 2567777775 6632
Q ss_pred ---CCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy612 685 ---ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 761 (1005)
Q Consensus 685 ---a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~ 761 (1005)
.|...++||++++||++++.|.++|++++++|+|+++++++.....+ +...+++++|++||++|+||||||.
T Consensus 256 ~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~-----~~~~a~~~al~~Agl~~~dId~~e~ 330 (407)
T 3svk_A 256 HTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLT-----GPTPATRKVLDRAGLTIDDIDLFEL 330 (407)
T ss_dssp CBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCC-----THHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred ccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccH-----HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 56677999999999999999999999999999999998876443322 3468899999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 762 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 762 hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
|.+.|. .|+..+ +.|+-.. .++.+.+-|..+||+.+|+|+..+++++++|+++
T Consensus 331 hdaf~~----~~l~~~-~~lg~~~---~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------------------- 383 (407)
T 3svk_A 331 NEAFAS----VVLKFQ-KDLNIPD---EKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------------------- 383 (407)
T ss_dssp CCSBHH----HHHHHH-HHHTCCG---GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------------------
T ss_pred eChhHH----HHHHHH-HHhCCCC---CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------------------
Confidence 998885 454433 4454321 2455666777799999999999999999999873
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..|+++++..+-||....+|||.
T Consensus 384 -----------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 -----------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp -----------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred -----------------CCCEEEEEeeccCcceEEEEEEc
Confidence 13677778788889999999984
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=263.94 Aligned_cols=248 Identities=18% Similarity=0.168 Sum_probs=186.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCccccccc
Q psy612 548 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTA 626 (1005)
Q Consensus 548 dpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~ta 626 (1005)
++..+++++++++||+|||++++++. +|++|+..+++.. ..++.+++..+|++ +|+++|+++
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~~-------------~~~a~~v~~~lgl~~~~~~~v~~a 111 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID----MIIVATATGDMPF-------------PTVANMLQERLGTGKVASMDQLAA 111 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCSS-------------SCHHHHHHHHHTCCSCCEEEEECG
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------CcHHHHHHHHhCCCCCcEEEECCc
Confidence 45789999999999999999887765 7899876543211 12588999999998 699999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||++|++.|++|+||.+||+|++.+..+ .+|||. .+|+++|||++++||++.++
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------~~~~d~-~~~~~~gdGa~A~vl~~~~~-- 171 (313)
T 1zow_A 112 CSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------TDLTDR-STAVLFGDGAGAVIIGEVSE-- 171 (313)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------CCTTCH-HHHTTBCEEEEEEEEEECST--
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------cCcccc-cceeeeccceEEEEEEecCC--
Confidence 9999999999999999999999999999974221 135553 37999999999999998765
Q ss_pred cCCCceEEE-EEEeeeccCCCCCCC----CCCCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy612 707 SDGDPIHAI-IRGSGINYDGKTNGI----TAPNG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 707 ~~g~~I~av-I~g~~~~~dG~~~~~----~~p~~--------~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E 773 (1005)
+++|+++ +.+.+...|.....- ..+++ ..+.++|+++|+++|++|+||+||++|++||+.+|.+
T Consensus 172 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~- 248 (313)
T 1zow_A 172 --GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESA- 248 (313)
T ss_dssp --TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHH-
T ss_pred --CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHH-
Confidence 3567664 333332222211000 01123 3788999999999999999999999999999988764
Q ss_pred HHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccc
Q psy612 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853 (1005)
Q Consensus 774 ~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w 853 (1005)
.+.|+-... .++ ++|+++||+.+|+++..|.+++ +.+.+.
T Consensus 249 ----~~~lg~~~~---~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~~---------------------------- 288 (313)
T 1zow_A 249 ----RERLGISKD---KMS--VSVNKYGNTSAASIPLSIDQEL---KNGKLK---------------------------- 288 (313)
T ss_dssp ----HHHHTCCGG---GBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCCC----------------------------
T ss_pred ----HHHhCCCHH---HHH--HhHhhhCchHHHHHHHHHHHHH---HcCCCC----------------------------
Confidence 456653221 123 4699999999999999987763 333211
Q ss_pred cccccCccEEEEcccCCCCceEEEEEe
Q psy612 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 854 ~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+..+.++.+||.|.+.+.++|+
T Consensus 289 -----~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 289 -----DDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp -----TTCEEEEEEEETTTEEEEEEEE
T ss_pred -----CCCEEEEEEEchhhhheEEEEE
Confidence 1135679999999999999996
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=241.99 Aligned_cols=222 Identities=12% Similarity=0.025 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCC-cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNN-KAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..++++. .+. ++.++.||++|+++++++++++.+++|
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999755554444455666677765 443 599999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| .+.+.++||++||+++..+.+++..|+++
T Consensus 87 ~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~~~~g~iv~isS~~~~~~~~~~~~Y~as 162 (265)
T 3lf2_A 87 CASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQL---ESRADAAIVCVNSLLASQPEPHMVATSAA 162 (265)
T ss_dssp SCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSTTEEEEEEEEGGGTSCCTTBHHHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHh---hccCCeEEEEECCcccCCCCCCchhhHHH
Confidence 9999999999987 7889999999999999999999999999999995 34457899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc----------hhhhHHHHh---cCC-CCCCHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----------EQTDFYFKS---SKQ-KVLHENDGLKLF 290 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----------~~~~~~~~~---~g~-~~l~~~~~~~~l 290 (1005)
|+++++|++.++.+.. ..++++.+|.+|... +.|..... ......... ..+ +..+++|..+.+
T Consensus 163 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 239 (265)
T 3lf2_A 163 RAGVKNLVRSMAFEFA--PKGVRVNGILIGLVE-SGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239 (265)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeCcCc-CchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHH
Confidence 9999999999988754 345688899888664 33322110 001111111 111 245788888888
Q ss_pred HHHHh
Q psy612 291 EQLLI 295 (1005)
Q Consensus 291 ~~~l~ 295 (1005)
..++.
T Consensus 240 ~fL~s 244 (265)
T 3lf2_A 240 LFLAS 244 (265)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 77665
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=246.36 Aligned_cols=221 Identities=13% Similarity=0.078 Sum_probs=181.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-------chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-------LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-------~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
++|++|||||++|||+++|++|+++|++++++.++.+ ..++..++++..+.++.+++||++|+++++++++++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 5799999999999999999999999996555554443 345667777777889999999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCC
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FGS 218 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~g~ 218 (1005)
.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+| .+.+.++||++||+++..+. +++
T Consensus 88 ~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m---~~~~~g~iv~isS~~~~~~~~~~~ 163 (285)
T 3sc4_A 88 VEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHM---KGRDNPHILTLSPPIRLEPKWLRP 163 (285)
T ss_dssp HHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGT---TTSSSCEEEECCCCCCCSGGGSCS
T ss_pred HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH---HHcCCcEEEEECChhhccCCCCCC
Confidence 999999999999999987 7889999999999999999999999999999985 44457899999999999886 889
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+.|+++|+++.+|++.++.+.. ..++++.+|.+|.+.++.|....... ...--+..++++..+.+..++..+.
T Consensus 164 ~~Y~asKaal~~~~~~la~e~~--~~gI~vn~v~PG~~v~t~~~~~~~~~-----~~~~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 164 TPYMMAKYGMTLCALGIAEELR--DAGIASNTLWPRTTVATAAVQNLLGG-----DEAMARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECSSCBCCHHHHHHHTS-----CCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred chHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEeCCCccccHHHHhhccc-----cccccCCCCHHHHHHHHHHHhCCcc
Confidence 9999999999999999988754 44568999998854455543211000 0001134689999999988876543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=243.83 Aligned_cols=225 Identities=11% Similarity=0.019 Sum_probs=170.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.+++||++|+++++++++++.+++|+|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999997555544433334444433 5678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++. ..+.++||++||+++..+.++++.|+++|+
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 182 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQ-EPRGGRIINNGSISATSPRPYSAPYTATKH 182 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHS-SSCCEEEEEECCSSTTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC-CCCCcEEEEECchhhcCCCCCchHHHHHHH
Confidence 9999999997634688999999999999999999999999999997542 122589999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-HhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++++|++.++.+.. ..++++.+|.+|.+. +.|............ .....+..+++|.++.+..++..+.
T Consensus 183 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 183 AITGLTKSTSLDGR--VHDIACGQIDIGNAD-TPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEEEECC-------------------------CHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhC--ccCEEEEEEEECccc-ChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCC
Confidence 99999999887743 345688888887664 444322111111101 1111235688999999988887654
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=240.50 Aligned_cols=220 Identities=11% Similarity=0.091 Sum_probs=177.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|++|+++|++++++.++.+..++..+++.+.+.++.++.+|++|++++.++++++.+.+|+|
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999975555444455567777888888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKa 184 (262)
T 3rkr_A 108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA---AKRGHIINISSLAGKNPVADGAAYTASKW 184 (262)
T ss_dssp SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCCEEEEECSSCSSCCCTTCHHHHHHHH
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCchHHHHHH
Confidence 999999998433678899999999999999999999999999999653 35689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++++|++.++.+.. ..++++.+|.+|.+. +.|...... .......++++|.++.+..++....
T Consensus 185 a~~~l~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~------~~~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 185 GLNGLMTSAAEELR--QHQVRVSLVAPGSVR-TEFGVGLSA------KKSALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECCC-----------------------CCCHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEecCCCc-CCccccccc------ccccccCCCHHHHHHHHHHHhcCcc
Confidence 99999999887743 345688899888664 445322111 1112345789999999988876543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=239.20 Aligned_cols=214 Identities=16% Similarity=0.095 Sum_probs=167.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.++.+|++|+++++++++++.+++|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence 689999999999999999999999997555544434444444444 33689999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +. .++||++||+++..+.++++.|+++|++
T Consensus 80 ~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~-~~~iv~isS~~~~~~~~~~~~Y~asKaa 154 (235)
T 3l6e_A 80 LVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIG---ER-GGVLANVLSSAAQVGKANESLYCASKWG 154 (235)
T ss_dssp EEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---TT-CEEEEEECCEECCSSCSSHHHHHHHHHH
T ss_pred EEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---Hc-CCEEEEEeCHHhcCCCCCCcHHHHHHHH
Confidence 9999999977 77889999999999999999999999999999863 22 3599999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+.+|++.++.+.. ..++++.+|.+|... +.|...... ......+++++..+.+..++..+..
T Consensus 155 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~-------~~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 155 MRGFLESLRAELK--DSPLRLVNLYPSGIR-SEFWDNTDH-------VDPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHHHTT--TSSEEEEEEEEEEEC-CCC------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHhh--ccCCEEEEEeCCCcc-CcchhccCC-------CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999988743 445688899887663 444322111 0112468999999999988875543
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=243.68 Aligned_cols=224 Identities=18% Similarity=0.162 Sum_probs=178.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC------------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 134 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~------------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~ 134 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..++..+.++..+.++.++++|++|++++++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 579999999999999999999999999765554431 12234555666778899999999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
+++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK---RNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGGSC
T ss_pred HHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEECChhhcCC
Confidence 99999999999999999999987 788999999999999999999999999999999754 24689999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----------hhh---hHHHHh---cC
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQT---DFYFKS---SK 277 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~---~~~~~~---~g 277 (1005)
.++++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... ... ...+.. ..
T Consensus 165 ~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
T 3s55_A 165 NFAQASYVSSKWGVIGLTKCAAHDLV--GYGITVNAVAPGNIE-TPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY 241 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-STTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-CccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence 99999999999999999999988743 345688899888764 44432100 000 000011 11
Q ss_pred CCCCCHHHHHHHHHHHHhcc
Q psy612 278 QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 278 ~~~l~~~~~~~~l~~~l~~~ 297 (1005)
.+...++|..+.+..++...
T Consensus 242 ~~~~~p~dvA~~v~~L~s~~ 261 (281)
T 3s55_A 242 APFLKPEEVTRAVLFLVDEA 261 (281)
T ss_dssp CSCBCHHHHHHHHHHHHSGG
T ss_pred cCCCCHHHHHHHHHHHcCCc
Confidence 23467889888888877543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=244.06 Aligned_cols=224 Identities=12% Similarity=0.060 Sum_probs=180.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|+++ +++.|+ +..+++.++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKV-VVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEE-EECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999974 455555 4556677777777889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+++. .+.++++.|+++
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~~Y~as 162 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA---LGGGSLTFTSSFVGHTAGFAGVAPYAAS 162 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence 9999999998743578899999999999999999999999999999753 356899999999998 788999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-c----chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-N----NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~----~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++..|++.++.+.. ..++++.+|.+|.... .|... . ............+ +..+++|..+.+..++...
T Consensus 163 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 238 (280)
T 3tox_A 163 KAGLIGLVQALAVELG--ARGIRVNALLPGGTDT-PANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDG 238 (280)
T ss_dssp HHHHHHHHHHHHHHHH--TTTEEEEEEEECSBSS-TTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEECCCCC-chhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999988743 3456889999887754 33221 1 1111111111122 3468999999988877644
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=245.02 Aligned_cols=222 Identities=12% Similarity=0.124 Sum_probs=180.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++ +.+|+ +..++..+++++.+.++.++.+|++|+++++++++++.+++|+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARIL-INGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 689999999999999999999999998655 45554 4556777788888889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+++..+.++++.|+++|
T Consensus 104 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 104 VDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIP---RGYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 999999999987 788999999999999999999999999999999754 2458899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|.+. +.|..... ...........+ +..+++|..+.+..++..
T Consensus 180 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 251 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWA--QYGIQANAIGPGYML-TDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS 251 (271)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hhCeEEEEEEeccEe-CcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999888743 345688999988764 34432111 111111222222 345788888887776653
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=237.51 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=182.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|++|+++|++++++.++.+..++..+++++.+.++.++.+|++|+++++++++++.+++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999876555554455667777788888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 84 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 84 DILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMK---KRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 99999999987 788899999999999999999999999999999754 24578999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-HhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|...........+ .... -+..++++..+.+..++...
T Consensus 160 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~ 229 (247)
T 3lyl_A 160 GVIGFSKSLAYEVA--SRNITVNVVAPGFIA-TDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE 229 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHH--HcCeEEEEEeeCcEe-cccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCC
Confidence 99999999887743 335688889887664 445433222211111 1111 23468899998888877543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=242.59 Aligned_cols=191 Identities=12% Similarity=0.075 Sum_probs=162.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC----------------CchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS----------------KLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~----------------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..++..++++..+.++.+++||++|++
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 689999999999999999999999999866665431 2234455566667889999999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
+++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++. ...++||++||++
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~ 167 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAG--GRGGSIILTSSVG 167 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCcEEEEECchh
Confidence 99999999999999999999999987623348899999999999999999999999999998542 2368999999999
Q ss_pred cccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 211 AILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 211 ~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
+..+.++++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.
T Consensus 168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~ 216 (286)
T 3uve_A 168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELG--QHMIRVNSVHPTHVK-TPML 216 (286)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-STTT
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCccc-CCcc
Confidence 999999999999999999999999988754 345688899887664 4443
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-25 Score=237.78 Aligned_cols=223 Identities=13% Similarity=0.173 Sum_probs=180.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.+++ +..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999766666534 3445566677777788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. +.++||++||+++..+.+++..|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (246)
T 2uvd_A 83 VDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ---RHGRIVNIASVVGVTGNPGQANYVAAK 158 (246)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECCHHhcCCCCCCchHHHHH
Confidence 999999999987 7788999999999999999999999999999997542 458999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|.+. +.|....... ......... .+..++++..+.+..++..
T Consensus 159 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 228 (246)
T 2uvd_A 159 AGVIGLTKTSAKELA--SRNITVNAIAPGFIA-TDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASD 228 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBG-GGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEEecccc-CcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998887643 345688999988764 4453322111 111112122 2356899999988887753
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=240.26 Aligned_cols=224 Identities=9% Similarity=0.042 Sum_probs=180.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
-++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.+.++.+++||++|+++++++++++.+++|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999997665554445566777788888889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. .++||++||+++..+.+++..|+++|
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asK 164 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES----KGAVVNVNSMVVRHSQAKYGAYKMAK 164 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH----TCEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEECcchhccCCCccHHHHHHH
Confidence 99999999986436789999999999999999999999999999997542 28899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc------------hhhhHHHHhcCC-CCCCHHHHHHHHHH
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------------EQTDFYFKSSKQ-KVLHENDGLKLFEQ 292 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------------~~~~~~~~~~g~-~~l~~~~~~~~l~~ 292 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|..... ...........+ +..+++|..+.+..
T Consensus 165 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 241 (264)
T 3ucx_A 165 SALLAMSQTLATELG--EKGIRVNSVLPGYIW-GGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILF 241 (264)
T ss_dssp HHHHHHHHHHHHHHH--TTTCEEEEEEESSCB-SHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--ccCeEEEEEecCccc-cccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence 999999999888743 345688999887764 33322110 001111111122 24578888888877
Q ss_pred HHhc
Q psy612 293 LLIQ 296 (1005)
Q Consensus 293 ~l~~ 296 (1005)
++..
T Consensus 242 L~s~ 245 (264)
T 3ucx_A 242 MASD 245 (264)
T ss_dssp HHSG
T ss_pred HcCc
Confidence 6653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=242.24 Aligned_cols=176 Identities=15% Similarity=0.183 Sum_probs=151.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+. ...+..+++||++|+++++++++++.++||+|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 79 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATRQRLGGV 79 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999976665544321 11234578999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhhHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Yaaa 224 (1005)
|++|||||+... ..++.+++.++|++++++|+.|+++++|+++|+|++ ++.+.||++||+++..+.+ +++.|+++
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~---~~~G~Iv~isS~~~~~~~~~~~~~Y~as 156 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVA---RGSGVVVHVTSIQRVLPLPESTTAYAAA 156 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhh---cCCceEEEEEehhhccCCCCccHHHHHH
Confidence 999999998542 457899999999999999999999999999999754 3468999999999999876 78999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+++.+|++.++.+.. ..++++.+|.+|...
T Consensus 157 Kaal~~lt~~lA~Ela--~~gIrVN~V~PG~i~ 187 (261)
T 4h15_A 157 KAALSTYSKAMSKEVS--PKGVRVVRVSPGWIE 187 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhh--hhCeEEEEEeCCCcC
Confidence 9999999999998865 456788899887664
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=238.31 Aligned_cols=223 Identities=14% Similarity=0.110 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.++.+|++|+++++++++++.+++|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999997666655555555555554 6778899999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||+... ...+.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.+++..|+++|
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK 163 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS---AGGGAIVNISSATAHAAYDMSTAYACTK 163 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTSBCSSCHHHHHHH
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEECCHHHcCCCCCChHHHHHH
Confidence 999999998732 556889999999999999999999999999999753 4568999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++++|++.++.+.. ..++++.+|.+|......+....... .........+ +..+++|..+.+..++...
T Consensus 164 aa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~ 235 (271)
T 3tzq_B 164 AAIETLTRYVATQYG--RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235 (271)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHh--hcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999988743 33568889988877543322111111 1111122222 3457899999888877643
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=242.35 Aligned_cols=224 Identities=11% Similarity=0.074 Sum_probs=180.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++ .+.++.++++|++|+++++++++++.+++|+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999755555444555666666765 5788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++. ...++||++||+++..+.+++..|+++|
T Consensus 99 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK 175 (266)
T 4egf_A 99 LDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA--GEGGAIITVASAAALAPLPDHYAYCTSK 175 (266)
T ss_dssp CSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEEEcchhhccCCCCChHHHHHH
Confidence 999999999987 7889999999999999999999999999999998542 2357999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+++|..+.+..++..
T Consensus 176 ~a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 247 (266)
T 4egf_A 176 AGLVMATKVLARELG--PHGIRANSVCPTVVL-TEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASD 247 (266)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEESCBC-SHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hhCeEEEEEEeCCCc-CchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999988743 335688899887664 3442211 1111112222222 245789999888887654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=240.76 Aligned_cols=219 Identities=15% Similarity=0.164 Sum_probs=171.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--C-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--N-NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+. + .++.+++||++|+++++++++++.+++
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999996555544445556666666554 3 678999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.. ...+ +.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|++
T Consensus 86 g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~a 160 (250)
T 3nyw_A 86 GAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKV---QKNGYIFNVASRAAKYGFADGGIYGS 160 (250)
T ss_dssp CCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECC-------CCTTHHHH
T ss_pred CCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEEccHHhcCCCCCCcchHH
Confidence 99999999999987 6666 7899999999999999999999999999754 24689999999999998888999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+|+++.+|++.++.+.. ..++++.+|.+|.+. +.|........ .....+++++.++.+..++..+..
T Consensus 161 sKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~------~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 161 TKFALLGLAESLYRELA--PLGIRVTTLCPGWVN-TDMAKKAGTPF------KDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBC-SHHHHHTTCCS------CGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHhh--hcCcEEEEEecCccc-CchhhhcCCCc------ccccCCCHHHHHHHHHHHHcCCCc
Confidence 99999999999988753 345688999888764 44432111100 012357899999999998876543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.93 E-value=8e-25 Score=240.83 Aligned_cols=225 Identities=15% Similarity=0.123 Sum_probs=180.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~---~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+. ++.++++|++|+++++++++++.+++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999766555444555667777877665 89999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+++..+.++++.|++
T Consensus 90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~a 166 (281)
T 3svt_A 90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVR---GGGGSFVGISSIAASNTHRWFGAYGV 166 (281)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEeCHHHcCCCCCChhHHH
Confidence 999999999998443678899999999999999999999999999999753 45689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+++|..+.+..++...
T Consensus 167 sK~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~ 241 (281)
T 3svt_A 167 TKSAVDHLMQLAADELG--ASWVRVNSIRPGLIR-TDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241 (281)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEEEeCcCc-CcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 99999999999887743 344688899887664 4443211 1111112222222 3457889888888777543
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-25 Score=239.36 Aligned_cols=222 Identities=16% Similarity=0.094 Sum_probs=178.9
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
..+|++|||||++|||+++|+.|+++|++++++.+|+. ..+++.++++..+.++.+++||++|+++++++++++.+++|
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999998887766664 44566677778888999999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| +. .++||++||.++..+.++++.|+++
T Consensus 105 ~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y~as 178 (267)
T 3u5t_A 105 GVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL---RV--GGRIINMSTSQVGLLHPSYGIYAAA 178 (267)
T ss_dssp CEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHE---EE--EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hh--CCeEEEEeChhhccCCCCchHHHHH
Confidence 9999999999987 7889999999999999999999999999999985 22 4789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.+. +.|.... ... .........+ +..+++|.++.+..++..
T Consensus 179 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 250 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELR--GRDITVNAVAPGPTA-TDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGP 250 (267)
T ss_dssp HHHHHHHHHHHHHHTT--TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHhh--hhCCEEEEEEECCCc-CccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999998854 456788999988775 4443211 111 1111121222 345789999888877653
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-25 Score=238.78 Aligned_cols=224 Identities=13% Similarity=0.086 Sum_probs=185.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|++|+++|++++++.+|+. ..++..+++.+.+.++.++.+|++|+++++++++++.+++|+
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999998878777764 445667777778889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.+++.|.+ ....++||++||+++..+.+++..|+++|
T Consensus 105 id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 105 WYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIG--ARQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred ccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 999999999987 788999999999999999999999999999888742 34568999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|.+. +.|................+ +..++++..+.+..++..
T Consensus 182 aa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~ 250 (267)
T 4iiu_A 182 AGIIGATKALAIELA--KRKITVNCIAPGLID-TGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSD 250 (267)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-STTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEEeeec-CCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 999999999888743 345688999988775 44543322222222333333 245889999888887754
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=242.07 Aligned_cols=224 Identities=11% Similarity=0.071 Sum_probs=175.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..++..++++.. +.++.++.+|++|+++++++++++.+++|
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 478999999999999999999999999655554434 3345566666655 67899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++
T Consensus 104 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~as 179 (281)
T 3v2h_A 104 GADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKK---KGWGRIINIASAHGLVASPFKSAYVAA 179 (281)
T ss_dssp SCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEECCcccccCCCCchHHHHH
Confidence 9999999999987 788999999999999999999999999999999754 246889999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh------------h-HHHHhcC-CCCCCHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT------------D-FYFKSSK-QKVLHENDGLKLF 290 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~------------~-~~~~~~g-~~~l~~~~~~~~l 290 (1005)
|+++++|++.++.+.. ..++++.+|.+|.+. +.|........ . ....... -+..+++|..+.+
T Consensus 180 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v 256 (281)
T 3v2h_A 180 KHGIMGLTKTVALEVA--ESGVTVNSICPGYVL-TPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA 256 (281)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-C----------------------------CCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEECCCCc-CcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 9999999999888743 334688899888764 33422111000 0 0111111 1346788888888
Q ss_pred HHHHhcc
Q psy612 291 EQLLIQD 297 (1005)
Q Consensus 291 ~~~l~~~ 297 (1005)
..++...
T Consensus 257 ~~L~s~~ 263 (281)
T 3v2h_A 257 LYLAGDD 263 (281)
T ss_dssp HHHHSSG
T ss_pred HHHcCCC
Confidence 8776543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=243.00 Aligned_cols=225 Identities=11% Similarity=0.083 Sum_probs=180.0
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++.. .+.++.++++|++|+++++++++++.+++|
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999655554444445555666643 477899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||+++..+.+++..|+++
T Consensus 105 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 180 (277)
T 4fc7_A 105 RIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD---HGGVIVNITATLGNRGQALQVHAGSA 180 (277)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH---HCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred CCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEECchhhCCCCCCcHHHHHH
Confidence 9999999999887 7889999999999999999999999999999987542 35789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.+....+... .............+ +..+++|..+.+..++..
T Consensus 181 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~ 254 (277)
T 4fc7_A 181 KAAVDAMTRHLAVEWG--PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASP 254 (277)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCC
Confidence 9999999999888753 3356889999887764322111 11111122222222 345789998888887753
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=233.14 Aligned_cols=216 Identities=13% Similarity=0.080 Sum_probs=177.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|++|+++|++++++.++.+..++..+++. ..+.++.+++||++|+++++++++++.+++|+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 36899999999999999999999999875555444445556666665 45788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ..+.+|++||..+..+.++.+.|+++|
T Consensus 81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----~~~~ii~~sS~~~~~~~~~~~~Y~~sK 155 (235)
T 3l77_A 81 VDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR----TGGLALVTTSDVSARLIPYGGGYVSTK 155 (235)
T ss_dssp CSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEECCGGGSSCCTTCHHHHHHH
T ss_pred CCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCcEEEEecchhcccCCCcchHHHHH
Confidence 999999999987 788999999999999999999999999999999743 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++++|++.+..+ ..++++.+|.+|... +.|......... ....+++++..+.+..++..+.
T Consensus 156 aa~~~~~~~l~~~----~~~i~v~~v~PG~v~-T~~~~~~~~~~~------~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 156 WAARALVRTFQIE----NPDVRFFELRPGAVD-TYFGGSKPGKPK------EKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp HHHHHHHHHHHHH----CTTSEEEEEEECSBS-SSTTTCCSCCCG------GGTCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHhhc----CCCeEEEEEeCCccc-cccccccCCccc------ccCCCCHHHHHHHHHHHHcCCC
Confidence 9999999998443 345689999887664 455432221111 1146899999999999887654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=238.52 Aligned_cols=221 Identities=12% Similarity=0.066 Sum_probs=179.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++. |++..++..+++...+.++.++.+|++|.++++++.+. .+++|+|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~g~i 107 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAATRRV 107 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc-CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhcCCC
Confidence 589999999999999999999999999766555 77767777888888888999999999999999999544 4667999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 108 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~IV~isS~~~~~~~~~~~~Y~asKa 183 (273)
T 3uf0_A 108 DVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLA---HGSGRIVTIASMLSFQGGRNVAAYAASKH 183 (273)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred cEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence 99999999987 788999999999999999999999999999999754 24688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++..|++.++.+.. ..++++.+|.+|.+.. .|.... ............+ +..+++|..+.+..++..
T Consensus 184 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 254 (273)
T 3uf0_A 184 AVVGLTRALASEWA--GRGVGVNALAPGYVVT-ANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASD 254 (273)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-GGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHh--hcCcEEEEEEeCCCcC-CchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999888743 3456888998887653 332211 1111112222222 346788888888877654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=240.70 Aligned_cols=221 Identities=14% Similarity=0.152 Sum_probs=164.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++. .++.+.++.++++|++|+++++++++++.+++|+|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI---AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999998765554433333333 33447789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++ ...++||++||+++..+.++++.|+++|+
T Consensus 103 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 178 (266)
T 3grp_A 103 DILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMR---RRYGRIINITSIVGVVGNPGQTNYCAAKA 178 (266)
T ss_dssp CEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCC-------CHHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCCcEEEEECCHHHcCCCCCchhHHHHHH
Confidence 99999999987 778899999999999999999999999999999754 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.+|++.++.+.. ..++++.+|.+|.+. +.|....... .........+ +...++|..+.+..++...
T Consensus 179 a~~~~~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~ 248 (266)
T 3grp_A 179 GLIGFSKALAQEIA--SRNITVNCIAPGFIK-SAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDE 248 (266)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEeeCcCC-CchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999888743 335688899888764 3443222111 1111222222 2346888888888776543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=243.28 Aligned_cols=187 Identities=17% Similarity=0.185 Sum_probs=162.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC------------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 134 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~------------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~ 134 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..++..+.++..+.++.++++|++|++++++
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 589999999999999999999999999877765431 12234555666778899999999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
+++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ ....++||++||+++..+
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~~g~Iv~isS~~~~~~ 201 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE--RGQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TCSCEEEEEECCGGGSSC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCCEEEEECcHHhcCC
Confidence 99999999999999999999987 788999999999999999999999999999999753 234689999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
.+++..|+++|+++..|++.++.+.. ..++++.+|.+|....
T Consensus 202 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~T 243 (317)
T 3oec_A 202 APGQSHYAASKHGVQGLMLSLANEVG--RHNIRVNSVNPGAVNT 243 (317)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBSS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCcccC
Confidence 99999999999999999999988743 3456889998887643
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=240.89 Aligned_cols=226 Identities=14% Similarity=0.172 Sum_probs=180.2
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+..+|++|||||++|||+++|++|+++|++++++.+|+. ..++..+++...+.++.++.||++|.++++++++++.+++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999998777665553 3344555666667889999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|+|++ .+.++||++||+++..+.++++.|++
T Consensus 102 g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~a 177 (269)
T 3gk3_A 102 GKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVE---RRFGRIVNIGSVNGSRGAFGQANYAS 177 (269)
T ss_dssp SCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred CCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEeCChhhccCCCCcchHHH
Confidence 99999999999987 788899999999999999999999999999999754 24589999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-h-HHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-D-FYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~-~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|++++.|++.++.+.. ..++++.+|.+|.+. +.|........ . .......+ +..++++..+.+..++...
T Consensus 178 sKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~ 251 (269)
T 3gk3_A 178 AKAGIHGFTKTLALETA--KRGITVNTVSPGYLA-TAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD 251 (269)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHhh--hcCCEEEEEecCccc-chhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCC
Confidence 99999999999887743 345688999988774 44433221110 0 11111111 2357899999888877543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-25 Score=237.13 Aligned_cols=223 Identities=13% Similarity=0.190 Sum_probs=165.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|++|+++|++++++.++.+..++..+++ +.++.++.+|++|+++++++++++.+++|+|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999998766665555544444443 5678899999999999999999999999999
Q ss_pred cEEEEcCcccCccchh----ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh---cCCCcEEEEecCcccccCCCCCh
Q psy612 147 DGVLHIAGISGLTSNI----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~----~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~---~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
|+||||||+.. ...+ .+.+.++|++++++|+.|++++++++.|+|++.. ....++||++||+++..+.+++.
T Consensus 83 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 161 (257)
T 3tpc_A 83 HGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQA 161 (257)
T ss_dssp CEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred CEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCc
Confidence 99999999876 4333 3788999999999999999999999999964311 02568999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh-HHHHhcC--CCCCCHHHHHHHHHHHHhc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSK--QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g--~~~l~~~~~~~~l~~~l~~ 296 (1005)
.|+++|++++.|++.++.+.. ..++++.+|.+|.+. +.|......... ....... -+..+++|..+.+..++..
T Consensus 162 ~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~ 238 (257)
T 3tpc_A 162 AYAASKGGVAALTLPAARELA--RFGIRVVTIAPGIFD-TPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN 238 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBS-CC--------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHH--HcCeEEEEEEeCCCC-ChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence 999999999999999887743 335688999988774 344322211111 1111111 1346789999988888764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=234.97 Aligned_cols=222 Identities=16% Similarity=0.101 Sum_probs=177.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~--~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+|++|||||++|||+++|+.|+++|++++++.++.+. .++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999876655544444 45666677776788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKL-DFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~-~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +. ++||++||+++..+.+++..|+++
T Consensus 82 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~s 157 (258)
T 3a28_C 82 FDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL---GVKGKIINAASIAAIQGFPILSAYSTT 157 (258)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc---CCCcEEEEECcchhccCCCCchhHHHH
Confidence 999999999987 6788999999999999999999999999999997542 33 789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCC-CCCCHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~~~~~~l~ 291 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..++++..+.+.
T Consensus 158 K~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 234 (258)
T 3a28_C 158 KFAVRGLTQAAAQELA--PKGHTVNAYAPGIVG-TGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS 234 (258)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hhCeEEEEEECCccC-ChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 9999999999887743 345688899887664 4442210 0001111111111 2568888888888
Q ss_pred HHHhc
Q psy612 292 QLLIQ 296 (1005)
Q Consensus 292 ~~l~~ 296 (1005)
.++..
T Consensus 235 ~l~s~ 239 (258)
T 3a28_C 235 FLASE 239 (258)
T ss_dssp HHHSG
T ss_pred HHhCc
Confidence 77653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=235.73 Aligned_cols=219 Identities=19% Similarity=0.168 Sum_probs=176.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecC--CCHHHHHHHHHHHHhh
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDV--SDKLKMISEINSIINN 142 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dv--td~~~v~~~~~~i~~~ 142 (1005)
-++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+.+ .++.++.+|+ +|+++++++++++.++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999975555444445556666666543 4788999999 9999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
+|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|+ +.+.++||++||+++..+.++++.|+
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~---~~~~g~iv~isS~~~~~~~~~~~~Y~ 166 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLL---KSDAGSLVFTSSSVGRQGRANWGAYA 166 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH---TSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH---HCCCCEEEEECChhhccCCCCCchhH
Confidence 999999999999864356889999999999999999999999999999964 34578999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++|+++++|++.++.+.. .. +++.+|.+|... +.|....... .......+++|....+..++...
T Consensus 167 asK~a~~~l~~~la~e~~--~~-irvn~v~PG~v~-t~~~~~~~~~------~~~~~~~~p~dva~~~~~L~s~~ 231 (252)
T 3f1l_A 167 ASKFATEGMMQVLADEYQ--QR-LRVNCINPGGTR-TAMRASAFPT------EDPQKLKTPADIMPLYLWLMGDD 231 (252)
T ss_dssp HHHHHHHHHHHHHHHHTT--TT-CEEEEEECCSBS-SHHHHHHCTT------CCGGGSBCTGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHhc--CC-cEEEEEecCccc-CchhhhhCCc------cchhccCCHHHHHHHHHHHcCcc
Confidence 999999999999998853 22 788899887664 3442111000 00112457888888887776543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=236.17 Aligned_cols=183 Identities=12% Similarity=0.106 Sum_probs=162.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+|+. ..++..+++++.+.++.+++||++|+++++++++++.+++|+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999998877777664 345667778888889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc-cccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS-AILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia-~~~g~~g~~~Yaaa 224 (1005)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||++ +..+.++++.|+++
T Consensus 97 id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~Y~as 170 (270)
T 3is3_A 97 LDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT-----EGGRIVLTSSNTSKDFSVPKHSLYSGS 170 (270)
T ss_dssp CCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-----TTCEEEEECCTTTTTCCCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----cCCeEEEEeCchhccCCCCCCchhHHH
Confidence 999999999987 78899999999999999999999999999999853 257899999998 66788999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+++.+|++.++.+.. ..++++.+|.+|...
T Consensus 171 Kaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~ 201 (270)
T 3is3_A 171 KGAVDSFVRIFSKDCG--DKKITVNAVAPGGTV 201 (270)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeCCcc
Confidence 9999999999988753 345688899887664
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=236.30 Aligned_cols=223 Identities=18% Similarity=0.172 Sum_probs=176.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..+++ +..+.++.++.||++|+++++++++++.+++|+
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 99 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6799999999999999999999999987555544434445555566 445778999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc-cccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS-AILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia-~~~g~~g~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+| .+...++||++||++ +..+.++...|+++
T Consensus 100 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m---~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 175 (267)
T 1vl8_A 100 LDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL---RESDNPSIINIGSLTVEEVTMPNISAYAAS 175 (267)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH---HHcCCcEEEEECCcchhccCCCCChhHHHH
Confidence 999999999987 6788999999999999999999999999999985 344568999999999 88889999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|.+. +.|..... ...........+ +..++++..+.+..++..
T Consensus 176 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 248 (267)
T 1vl8_A 176 KGGVASLTKALAKEWG--RYGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE 248 (267)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-STTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeccCc-cccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999887743 334588899887664 44432110 111111122222 356788888888877654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-25 Score=238.80 Aligned_cols=224 Identities=14% Similarity=0.180 Sum_probs=179.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|++|+++|++++++.++.. ..+++.+.+++.+.++.++.+|++|++++.++++++.+.+|+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999997666665453 334556677777889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.++|+|++ .+.++||++||+++..+.++++.|+++|
T Consensus 108 id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (271)
T 4iin_A 108 LSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSK---SRFGSVVNVASIIGERGNMGQTNYSASK 183 (271)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh---cCCCEEEEEechhhcCCCCCchHhHHHH
Confidence 999999999987 788889999999999999999999999999999754 3458899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........+ +..++++..+.+..++...
T Consensus 184 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~ 254 (271)
T 4iin_A 184 GGMIAMSKSFAYEGA--LRNIRFNSVTPGFIE-TDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDH 254 (271)
T ss_dssp HHHHHHHHHHHHHHH--TTTEEEEEEEECSBC-CC------------CGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHH--HhCcEEEEEEeCccc-CCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCC
Confidence 999999999887743 345688899888764 44533221111 111111222 3468899999988877643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=237.87 Aligned_cols=219 Identities=16% Similarity=0.130 Sum_probs=175.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+ .+++. ..++.++.+|++|+++++++++++.+.+|+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE-------RLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH-------HHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH-------HHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4789999999999999999999999997666554322 12222 236889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.+++..|+++|
T Consensus 88 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~~~~~Y~asK 163 (266)
T 3p19_A 88 ADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA---RNCGTIINISSIAGKKTFPDHAAYCGTK 163 (266)
T ss_dssp EEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEcChhhCCCCCCCchHHHHH
Confidence 999999999987 788999999999999999999999999999999754 2468899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hhhHHHH--h-cCCCCCCHHHHHHHHHHHHhccch
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFK--S-SKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~--~-~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|...... ....... . .--+..+++|.++.+..++..+..
T Consensus 164 ~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 164 FAVHAISENVREEVA--ASNVRVMTIAPSAVK-TELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBS-SSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEeeCccc-cchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 999999999988754 345688899888764 444322211 1111111 1 112357899999999998876643
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=234.80 Aligned_cols=184 Identities=15% Similarity=0.160 Sum_probs=157.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.+++||++|+++++++++++.+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999997555544333333333333 6678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ...++||++||+++..+.++++.|+++|+
T Consensus 84 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (259)
T 4e6p_A 84 DILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQ--GRGGKIINMASQAGRRGEALVAIYCATKA 160 (259)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEEECChhhccCCCCChHHHHHHH
Confidence 99999999987 7889999999999999999999999999999997542 23679999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+++.|++.++.+.. ..++++.+|.+|....
T Consensus 161 a~~~~~~~la~e~~--~~gi~vn~v~PG~v~t 190 (259)
T 4e6p_A 161 AVISLTQSAGLDLI--KHRINVNAIAPGVVDG 190 (259)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBCS
T ss_pred HHHHHHHHHHHHhh--hcCCEEEEEEECCCcc
Confidence 99999999887743 3346888998887654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=245.39 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=181.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC----------CCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR----------SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 136 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r----------~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 136 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++ .+..++..++++..+.++.++.||++|++++++++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 68999999999999999999999999976666544 34456677788888889999999999999999999
Q ss_pred HHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC---CCcEEEEecCccccc
Q psy612 137 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN---KLDFVCYFSSSSAIL 213 (1005)
Q Consensus 137 ~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~---~~~~iV~~SSia~~~ 213 (1005)
+++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++.... ..++||++||+++..
T Consensus 106 ~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 999999999999999999987 7889999999999999999999999999999998754322 247999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHH
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQL 293 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~ 293 (1005)
+.++++.|+++|+++..|++.++.+.. ..++++.+|.+| + .+.|.......... ........++++|....+..+
T Consensus 185 ~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v~PG-~-~t~~~~~~~~~~~~-~~~~~~~~~~pedva~~v~~L 259 (322)
T 3qlj_A 185 GSVGQGNYSAAKAGIATLTLVGAAEMG--RYGVTVNAIAPS-A-RTRMTETVFAEMMA-TQDQDFDAMAPENVSPLVVWL 259 (322)
T ss_dssp CBTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEEC-T-TSCCSCCSCCC---------CCTTCGGGTHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhc--ccCcEEEEecCC-C-CCccchhhhhhhhh-ccccccCCCCHHHHHHHHHHH
Confidence 999999999999999999999888743 345688999988 4 34454322111100 111223456889988888877
Q ss_pred Hhc
Q psy612 294 LIQ 296 (1005)
Q Consensus 294 l~~ 296 (1005)
+..
T Consensus 260 ~s~ 262 (322)
T 3qlj_A 260 GSA 262 (322)
T ss_dssp TSG
T ss_pred hCc
Confidence 654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=236.93 Aligned_cols=221 Identities=12% Similarity=0.124 Sum_probs=174.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..++ .+.++.++++|++|+++++++++++.+++|++
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999999765554443333333333 46789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| .+.+.++||++||+++..+.++++.|+++|+
T Consensus 103 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 178 (277)
T 4dqx_A 103 DVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVM---RRNGGGSIINTTSYTATSAIADRTAYVASKG 178 (277)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---HHcCCcEEEEECchhhCcCCCCChhHHHHHH
Confidence 99999999987 7889999999999999999999999999999995 3445689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc----chhhhH---HHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDF---YFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~---~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++|++.++.+.. ..++++.+|.+|... +.|.... ...... ......+ +..++++..+.+..++...
T Consensus 179 a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~ 254 (277)
T 4dqx_A 179 AISSLTRAMAMDHA--KEGIRVNAVAPGTID-SPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR 254 (277)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCcCc-CchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence 99999999887753 335688899887664 4441110 000011 1111122 2457899999888877543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.8e-25 Score=239.31 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=180.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..++++..+.++.++.+|++|.++++++++.+.+. |++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~i 110 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APV 110 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCC
Confidence 5899999999999999999999999997766666666777888888888889999999999999999999999877 999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++...|+++|+
T Consensus 111 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 111 DILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVA---RKWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 99999999987 788999999999999999999999999999999754 24689999999999999899999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc----hhhhHHHHhc-CC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFYFKSS-KQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~~~~~-g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++..|++.++.+.. ..++++.+|.+|... +.|..... .......... .+ +..+++|..+.+..++..
T Consensus 187 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~ 259 (275)
T 4imr_A 187 AQHNLIQSQARDFA--GDNVLLNTLAPGLVD-TDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASE 259 (275)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEESSBC-SHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEEecccc-CcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCc
Confidence 99999999888743 345688899888764 34432111 1111111111 12 345678888887776653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=236.35 Aligned_cols=223 Identities=16% Similarity=0.115 Sum_probs=176.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..+++.+. +.++.++.||++|+++++++++++.+++|
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999987655544444445555666554 67899999999999999999999999999
Q ss_pred CccEEEEcCcccCcc-chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 145 PIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~-~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
++|+||||||+.. . .++.+.+.++|++++++|+.|+++++++++|+|++. +.++||++||+++..+.+++..|++
T Consensus 92 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~a 167 (267)
T 1iy8_A 92 RIDGFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ---GSGMVVNTASVGGIRGIGNQSGYAA 167 (267)
T ss_dssp CCSEEEECCCCCC-CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred CCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEEcchhhccCCCCCccHHH
Confidence 9999999999876 5 778899999999999999999999999999997542 4689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----chhhh----HHHHhcCC-CCCCHHHHHHHHHHH
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQTD----FYFKSSKQ-KVLHENDGLKLFEQL 293 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~~~----~~~~~~g~-~~l~~~~~~~~l~~~ 293 (1005)
+|++++.|++.++.+.. ..++++.+|.+|... +.|.... ..... .......+ +..++++..+.+..+
T Consensus 168 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l 244 (267)
T 1iy8_A 168 AKHGVVGLTRNSAVEYG--RYGIRINAIAPGAIW-TPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL 244 (267)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--hcCeEEEEEEeCCCc-CcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 99999999999887743 335688899888664 4442210 11111 11111111 245888888888877
Q ss_pred Hhc
Q psy612 294 LIQ 296 (1005)
Q Consensus 294 l~~ 296 (1005)
+..
T Consensus 245 ~s~ 247 (267)
T 1iy8_A 245 LSD 247 (267)
T ss_dssp TSG
T ss_pred cCc
Confidence 653
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=237.02 Aligned_cols=230 Identities=15% Similarity=0.168 Sum_probs=179.6
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+.++|++|||||++|||+++|++|+++|++++++..|+. ..+++.++++..+.++.++.+|++|+++++++++++.+++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 556899999999999999999999999998877767664 4456667777778899999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhh
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYA 222 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Ya 222 (1005)
|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++......++||++||+++..+.+ +...|+
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 182 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA 182 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence 9999999999987634788999999999999999999999999999997543344578999999999999877 678899
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++|++++.|++.++.+.. ..++++.+|.+|.+.. .|.... ............ ....++++.++.+..++...
T Consensus 183 asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~ 257 (272)
T 4e3z_A 183 ASKAAIDTFTIGLAREVA--AEGIRVNAVRPGIIET-DLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPS 257 (272)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHH--HcCcEEEEEecCCCcC-CcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence 999999999998887743 3346889999887753 332211 111111111111 12346899999988877543
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-24 Score=233.93 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=176.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||+||||+++|+.|+++|++++++.++.+..+++.++++..+.++.++.+|++|+++++++++++.+++|++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999998755554443445566677777777899999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||+++..+.++...|+++|++
T Consensus 82 ~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 158 (256)
T 1geg_A 82 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE--GHGGKIINACSQAGHVGNPELAVYSSSKFA 158 (256)
T ss_dssp EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCCEEEEECchhhcCCCCCchhHHHHHHH
Confidence 9999999876 6788999999999999999999999999999997542 125789999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----------chh-hhHHHHhcCC-CCCCHHHHHHHHHHHH
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----------NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLL 294 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----------~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l 294 (1005)
++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+...+ +..++++..+.+..++
T Consensus 159 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~ 235 (256)
T 1geg_A 159 VRGLTQTAARDLA--PLGITVNGYCPGIVK-TPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA 235 (256)
T ss_dssp HHHHHHHHHHHHG--GGTEEEEEEEECSBS-SHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HcCeEEEEEEECCCc-cchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999887643 335688899887664 3332111 000 0111111111 3467888888888776
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 236 s~ 237 (256)
T 1geg_A 236 SP 237 (256)
T ss_dssp SG
T ss_pred Cc
Confidence 53
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=233.66 Aligned_cols=225 Identities=11% Similarity=0.117 Sum_probs=177.5
Q ss_pred cCCCEEEEECChh-HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTG-RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~g-GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
-.+|++|||||+| |||+++|++|+++|++++++.++.+..++..+++++.+ .++.++.||++|+++++++++++.+++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 3689999999985 99999999999999876655555455666777776654 689999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ....++||++||+++..+.++++.|++
T Consensus 100 g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 176 (266)
T 3o38_A 100 GRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRG--VDHGGVIVNNASVLGWRAQHSQSHYAA 176 (266)
T ss_dssp SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--SSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred CCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence 99999999999987 788999999999999999999999999999999743 225689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++.+|.+|... +.|...... .......... -+..+++|..+.+..++..
T Consensus 177 sKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~ 249 (266)
T 3o38_A 177 AKAGVMALTRCSAIEAV--EFGVRINAVSPSIAR-HKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASD 249 (266)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-C-----------------CCTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHH--HcCcEEEEEeCCccc-chhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence 99999999999888743 344688889887664 444322111 1111111111 2346899999998887754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-24 Score=235.05 Aligned_cols=223 Identities=12% Similarity=0.069 Sum_probs=176.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.+.+ |+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999875555444344556667777777889999999999999999999999999 99
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.+++..|+++|
T Consensus 100 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 175 (273)
T 1ae1_A 100 LNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS---QNGNVIFLSSIAGFSALPSVSLYSASK 175 (273)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcCHhhcCCCCCcchhHHHH
Confidence 999999999976 6788899999999999999999999999999997542 458999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-------hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-------EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-------~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|... +.|..... ...........+ +..++++..+.+..++..
T Consensus 176 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 251 (273)
T 1ae1_A 176 GAINQMTKSLACEWA--KDNIRVNSVAPGVIL-TPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP 251 (273)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC--------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEEeCCCc-CchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999887743 335688899887664 44432110 111111222222 356889998888877653
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=238.19 Aligned_cols=221 Identities=14% Similarity=0.159 Sum_probs=175.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.++.++++|++|+++++++++++.+++|+|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999996655544433334444333 6788999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 105 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 180 (277)
T 3gvc_A 105 DKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE---RGGGAIVNLSSLAGQVAVGGTGAYGMSKA 180 (277)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence 99999999987 788999999999999999999999999999999753 35689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----h-----hhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----Q-----TDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~-----~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|...... . .........-+..+++|..+.+..++...
T Consensus 181 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~ 257 (277)
T 3gvc_A 181 GIIQLSRITAAELR--SSGIRSNTLLPAFVD-TPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDD 257 (277)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEeeCCcc-CchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCc
Confidence 99999998887743 345688899887664 333211000 0 00000111123568899998888877543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=237.13 Aligned_cols=222 Identities=15% Similarity=0.157 Sum_probs=175.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+|+. ..++..+++++.+.++.++.||++|+++++++++++.+++|+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999998777756654 445666778777888999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|+ + .++||++||+++. .+.+++..|+++
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~---~--~g~iv~isS~~~~~~~~~~~~~Y~as 161 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMA---K--GGAIVTFSSQAGRDGGGPGALAYATS 161 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---E--EEEEEEECCHHHHHCCSTTCHHHHHH
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--CCEEEEEcCHHhccCCCCCcHHHHHH
Confidence 999999999873367889999999999999999999999999998752 2 5789999999998 788999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++++|++.++.+.. . .+++.+|.+|... +.|..... ........... -+..+++|..+.+..++...
T Consensus 162 Kaa~~~l~~~la~e~~--~-~I~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~ 233 (259)
T 3edm_A 162 KGAVMTFTRGLAKEVG--P-KIRVNAVCPGMIS-TTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDD 233 (259)
T ss_dssp HHHHHHHHHHHHHHHT--T-TCEEEEEEECCBC-C----------------------CCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHC--C-CCEEEEEEECCCc-CcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999988753 2 2788899887664 44432211 11111111111 12457899999888877543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=234.03 Aligned_cols=223 Identities=13% Similarity=0.065 Sum_probs=174.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+. .+++.+++++. +.++.++.+|++|+++++++++++.+++|
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999875555444444 45556666554 67899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. ..++||++||+++..+.+++..|+++
T Consensus 83 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 158 (260)
T 1x1t_A 83 RIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ---GFGRIINIASAHGLVASANKSAYVAA 158 (260)
T ss_dssp CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEECcHHhCcCCCCCchHHHH
Confidence 9999999999877 6788999999999999999999999999999997542 35899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch------------hhhHH-HHhcC-CCCCCHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFY-FKSSK-QKVLHENDGLKLF 290 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~-~~~~g-~~~l~~~~~~~~l 290 (1005)
|+++..|++.++.+.. ..++++.+|.+|... +.|...... ..... ..... .+..++++..+.+
T Consensus 159 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~ 235 (260)
T 1x1t_A 159 KHGVVGFTKVTALETA--GQGITANAICPGWVR-TPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235 (260)
T ss_dssp HHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-C------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--cCCEEEEEEeecCcc-CchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHH
Confidence 9999999999887743 345688899887664 444321100 00001 11111 1346788888888
Q ss_pred HHHHhc
Q psy612 291 EQLLIQ 296 (1005)
Q Consensus 291 ~~~l~~ 296 (1005)
..++..
T Consensus 236 ~~l~s~ 241 (260)
T 1x1t_A 236 VFLASD 241 (260)
T ss_dssp HHHHSG
T ss_pred HHHhCh
Confidence 877653
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=233.56 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=169.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++ +.++.++.+|++|+++++++++++.+++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 58999999999999999999999987555444333333333333 457899999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.+++..|+++|+++
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 154 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE---RNHGHIINIGSTAGSWPYAGGNVYGATKAFV 154 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCceEEEEccchhccCCCCCchHHHHHHHH
Confidence 9999998632467889999999999999999999999999999754 2458999999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chhhhHHHH-hcCCCCCCHHHHHHHHHHHHhcc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFK-SSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~-~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++|++.++.+.. ..++++.+|.+|...++.|.... ........+ .....++++++..+.+..++..+
T Consensus 155 ~~~~~~la~e~~--~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 155 RQFSLNLRTDLH--GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp HHHHHHHHHHTT--TSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhh--hcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCC
Confidence 999999887743 34568999998877535553211 000000000 01234679999999998888643
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=241.34 Aligned_cols=217 Identities=14% Similarity=0.089 Sum_probs=179.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-------~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+. ..+..++++..+.++.++.||++|+++++++++++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 68999999999999999999999999876555544432 45667778888889999999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--CCC
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFG 217 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--~~g 217 (1005)
.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+| .+.+.++||++||+++..+ .++
T Consensus 124 ~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m---~~~~~g~IV~iSS~~~~~~~~~~~ 199 (346)
T 3kvo_A 124 IKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYL---KKSKVAHILNISPPLNLNPVWFKQ 199 (346)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHH---TTCSSCEEEEECCCCCCCGGGTSS
T ss_pred HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH---HHCCCCEEEEECCHHHcCCCCCCC
Confidence 999999999999999987 7889999999999999999999999999999995 4456789999999999887 789
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+..|+++|+++..|++.++.+.. .++++.+|.+|...++.|....... ....+..++++.++.+..++..
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~---~gIrvn~v~PG~~i~T~~~~~~~~~------~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFK---GEIAVNALWPKTAIHTAAMDMLGGP------GIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTT---TTCEEEEEECSBCBCCHHHHHHCC--------CGGGCBCTHHHHHHHHHHHTS
T ss_pred chHHHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCccccHHHHhhccc------cccccCCCHHHHHHHHHHHHhc
Confidence 99999999999999999988743 4568889988753344432110000 0011246889999998888865
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-25 Score=253.88 Aligned_cols=290 Identities=16% Similarity=0.184 Sum_probs=209.4
Q ss_pred cEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 464 LIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 464 ~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
.+.|+|+++.+|.. .+.++||+.+.. + ++|-. ..+||..+
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~-~~~i~------------------------------~~~Gi~~R 45 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDT--------S-DAWIS------------------------------SRTGVRQR 45 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTC--------C-HHHHH------------------------------HHHCCCEE
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCC--------C-HHHHH------------------------------HhhCceEE
Confidence 47899999999985 677888876531 1 11210 12233333
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcc
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVM 621 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~ 621 (1005)
.....++..+++++++++||+|||+ +++. +|++|+...++. .+ ..+.++++.||++ +|++
T Consensus 46 ~~~~~~~~~~la~~Aa~~al~~ag~--~~id----~vi~~t~~~~~~--------~p-----~~a~~v~~~lgl~~~~~~ 106 (331)
T 2x3e_A 46 HIAGDLGSGDLALRAASAALASAGL--ERVD----AVVLATSTGDFC--------CP-----ATAPRVAARLGLVGALAF 106 (331)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTC--SCCS----EEEEECSSCSEE--------ES-----CSHHHHHHHTTCTTSEEE
T ss_pred EecCCCCHHHHHHHHHHHHHHhCCc--ccCC----EEEEEeCCCCCC--------CC-----hHHHHHHHHhCCCCCcEE
Confidence 3222277899999999999999998 4443 678887654321 11 2578999999998 8999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcc
Q psy612 622 AINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 701 (1005)
Q Consensus 622 ~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~ 701 (1005)
+|+++|+|++.||+.|++.|++|++|.+||+|++.+ ++. +. |+...+|+++|||++++||++
T Consensus 107 ~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~vL~~ 168 (331)
T 2x3e_A 107 DLSAAATGFVYGLASVGSLISAGLADSALLVGVDTF-SHT----------LD-------PADRSTRALFGDGAGAVVLRA 168 (331)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGG----------SC-------TTCHHHHHHBCCEEEEEEEEE
T ss_pred EEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccC----------CC-------ccccccceeeccccEEEEEEe
Confidence 999999999999999999999999999999999973 332 11 222457999999999999998
Q ss_pred cchhhcCCCceEEEEEEeeeccCCCC-CCCCCC------------------CH--------HHHHHHHHHHHHHcCCCCC
Q psy612 702 LSRALSDGDPIHAIIRGSGINYDGKT-NGITAP------------------NG--------ISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 702 l~~A~~~g~~I~avI~g~~~~~dG~~-~~~~~p------------------~~--------~~q~~~i~~al~~agi~~~ 754 (1005)
.++| ++++|++.. +.+||.. ..++.| ++ ..+.++++++|+++|++|+
T Consensus 169 ~~~a--~~~~i~~~~----~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~ 242 (331)
T 2x3e_A 169 GDAE--EEGALLAFD----LGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQAS 242 (331)
T ss_dssp ECTT--STTBEEEEE----EEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred cCCC--CCCceEEEE----EEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 8766 456776543 3445432 122222 22 5788999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcc
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN 834 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n 834 (1005)
||+||.+|+++|++.|. +.+.|+-... .++. .+.++||+.+|+....|..+ ++.+.+.|
T Consensus 243 did~~~~H~~~~~~~d~-----~~~~lg~~~~---~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~~~-------- 301 (331)
T 2x3e_A 243 DLHHLVPHQANTRILAA-----VADQLDLPVE---RVVS--NIAEVGNTVAASIPLALAHG---LRQGILRD-------- 301 (331)
T ss_dssp GCSEEEECCCCHHHHHH-----HHHHHTCCGG---GBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSCT--------
T ss_pred HCCEEEEcCCCHHHHHH-----HHHHcCCCHH---HHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCCCC--------
Confidence 99999999999998775 5556653221 1222 35789999999988877654 23332211
Q ss_pred cccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 835 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 835 ~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
..+.++.+||.|.+.+.++|+-
T Consensus 302 -------------------------G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 302 -------------------------GGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp -------------------------TCEEEEEEEETTTEEEEEEEEC
T ss_pred -------------------------CCEEEEEEEeHHhhheeeEEEE
Confidence 1356799999999999999963
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-26 Score=255.44 Aligned_cols=296 Identities=14% Similarity=0.152 Sum_probs=208.1
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
...+.|+|+++.+|.. .+.++||+.+.. + ++|- ..++||.
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~-~~~i------------------------------~~~~gi~ 50 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDS--------S-DEWI------------------------------YTRTGIK 50 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSC--------C-HHHH------------------------------HHHHCCS
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCC--------C-HHHH------------------------------HHhcCCc
Confidence 3468999999999985 667888764311 1 1121 1134444
Q ss_pred hhhhcc-CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-C
Q psy612 541 PLEAER-MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G 618 (1005)
Q Consensus 541 ~~ea~~-mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G 618 (1005)
.+.... .++..+++++++++||+|||+++++++ +|++|+..+++.. ...++++++.||++ +
T Consensus 51 ~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id----~vi~~t~~~~~~~-------------~~~a~~v~~~lgl~~~ 113 (335)
T 1u6e_A 51 TRRFAADDESAASMATEACRRALSNAGLSAADID----GVIVTTNTHFLQT-------------PPAAPMVAASLGAKGI 113 (335)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCSS-------------SCHHHHHHHHHTCTTS
T ss_pred eEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------ChHHHHHHHHhCCCCC
Confidence 444332 567899999999999999999887776 8999876543321 13688999999998 6
Q ss_pred CcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEE
Q psy612 619 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVV 698 (1005)
Q Consensus 619 ps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vv 698 (1005)
|+++|+++|+|++.||++|++.|++|+||.+||+|++.+.. .++||| ..+|+++|||++++|
T Consensus 114 ~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------~~~~~d-~~~~~~~gDGA~A~v 175 (335)
T 1u6e_A 114 LGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------TIDMYD-RGNCFIFADGAAAVV 175 (335)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------GCCTTC-TTTTTTBCEEEEEEE
T ss_pred cEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------ccCccc-cccceEeccccEEEE
Confidence 99999999999999999999999999999999999997531 134555 358999999999999
Q ss_pred EcccchhhcCCCceEEEEEEee-eccCCCC------------C---CCCCCC--------HHHHHHHHHHHHHHcCCCCC
Q psy612 699 LKRLSRALSDGDPIHAIIRGSG-INYDGKT------------N---GITAPN--------GISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 699 Lk~l~~A~~~g~~I~avI~g~~-~~~dG~~------------~---~~~~p~--------~~~q~~~i~~al~~agi~~~ 754 (1005)
|++.++ + .|++++.++. ..++... . .....+ ...+.++++++|+++|++|+
T Consensus 176 l~~~~~---~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~ 250 (335)
T 1u6e_A 176 VGETPF---Q--GIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPD 250 (335)
T ss_dssp EEECSS---C--CBCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EEecCC---C--CeeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 998764 2 2555554431 1111100 0 000112 34788999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcc
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN 834 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n 834 (1005)
||+|+++|+++|+..|. +.+.|+-... ..+. ..+.++||+.+|+....|... ++.+.+
T Consensus 251 dId~~~~H~~~~~~~~~-----~~~~lg~~~~--~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~---------- 308 (335)
T 1u6e_A 251 QIDVFVPHQANSRINEL-----LVKNLQLRPD--AVVA--NDIEHTGNTSAASIPLAMAEL---LTTGAA---------- 308 (335)
T ss_dssp GCCEEEECCSCHHHHHH-----HHHHHTCCTT--CEEC--CTHHHHCBCGGGHHHHHHHHH---HHHTSS----------
T ss_pred HCCEEEECCCCHHHHHH-----HHHHcCCCch--hhhh--hhhhhhCcHHHHHHHHHHHHH---HHcCCC----------
Confidence 99999999999987776 4455653221 1222 246889999999865433222 111110
Q ss_pred cccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 835 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 835 ~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.+..++++++||+|++++.++|+-
T Consensus 309 -----------------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 -----------------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 012467899999999999999974
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-24 Score=231.35 Aligned_cols=223 Identities=14% Similarity=0.098 Sum_probs=178.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.+++ |+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999875555444344556666777777889999999999999999999999999 99
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.+++..|+++|
T Consensus 88 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (260)
T 2ae2_A 88 LNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA---SERGNVVFISSVSGALAVPYEAVYGATK 163 (260)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEcchhhccCCCCcchHHHHH
Confidence 999999999886 678889999999999999999999999999999753 3468999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhh---HHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTD---FYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~---~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|... +.|.... ..... .......+ +..++++..+.+..++..
T Consensus 164 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~ 238 (260)
T 2ae2_A 164 GAMDQLTRCLAFEWA--KDNIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 238 (260)
T ss_dssp HHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-SHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEecCCCC-CcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 999999999887743 335688899887664 3332110 00001 11111122 356888988888877653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=234.57 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=159.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+. .++..+++++.+.++.++.+|++|.++++++++++.+.+|+
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999976665555432 34556677777888999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-ChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+| ...++||++||+++..+.++ +..|+++
T Consensus 108 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~~~Y~as 181 (283)
T 1g0o_A 108 LDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL-----EIGGRLILMGSITGQAKAVPKHAVYSGS 181 (283)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS-----CTTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-----hcCCeEEEEechhhccCCCCCCcchHHH
Confidence 999999999987 6788999999999999999999999999999985 24589999999999988764 9999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|++++.|++.++.+.. ..++++.+|.+|....
T Consensus 182 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t 213 (283)
T 1g0o_A 182 KGAIETFARCMAIDMA--DKKITVNVVAPGGIKT 213 (283)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBSS
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEecCcccc
Confidence 9999999999887643 3356888998877643
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-24 Score=229.79 Aligned_cols=218 Identities=17% Similarity=0.208 Sum_probs=170.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+|++|||||++|||+++|+.|+++|+ .+|++..|+.. .+++.++ .+.++.++++|++|+++++++++++.+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEK---YGDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHH---HGGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999974 46666667642 2333332 3678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. .++||++||+++..+.++++.|+++|
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~g~iv~isS~~~~~~~~~~~~Y~asK 154 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT----NGNVVFVSSDACNMYFSSWGAYGSSK 154 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCSCCCCSSCCSHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCeEEEEcCchhccCCCCcchHHHHH
Confidence 99999999986535788999999999999999999999999999998642 27899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc----------hhhhHHHHhcC-CCCCCHHHHHHHHHHHH
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----------EQTDFYFKSSK-QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----------~~~~~~~~~~g-~~~l~~~~~~~~l~~~l 294 (1005)
+++..|++.++.+. .++++.+|.+|... +.|..... ........... -+..++++..+.+..++
T Consensus 155 ~a~~~~~~~la~e~----~~i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~ 229 (254)
T 3kzv_A 155 AALNHFAMTLANEE----RQVKAIAVAPGIVD-TDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA 229 (254)
T ss_dssp HHHHHHHHHHHHHC----TTSEEEEEECSSCC-CCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc----cCcEEEEEeCCccc-chhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence 99999999998874 35788999887664 44533211 11111111112 23457788888887777
Q ss_pred hcc
Q psy612 295 IQD 297 (1005)
Q Consensus 295 ~~~ 297 (1005)
...
T Consensus 230 s~~ 232 (254)
T 3kzv_A 230 LHG 232 (254)
T ss_dssp HHC
T ss_pred hhc
Confidence 544
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=238.50 Aligned_cols=223 Identities=13% Similarity=0.078 Sum_probs=176.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+. .+...+.++..+.++.++++|++|+++++++++++.+++|+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999976666555442 34455556677889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+......+.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.+++..|+++|
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~Y~asK 200 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK-----QGDVIINTASIVAYEGNETLIDYSATK 200 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC-----TTCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----hCCEEEEEechHhcCCCCCChhHHHHH
Confidence 999999999875356788999999999999999999999999998752 357899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chh-hhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++.+|.+|.... .|.... ... ......... -+..+++|..+.+..++...
T Consensus 201 aa~~~l~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~ 272 (291)
T 3ijr_A 201 GAIVAFTRSLSQSLV--QKGIRVNGVAPGPIWT-PLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSD 272 (291)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBCS-THHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHh--hcCEEEEEEeeCCCcC-CcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCc
Confidence 999999999988754 3356888998887643 332111 111 111111111 12457888888888776543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-24 Score=234.89 Aligned_cols=220 Identities=16% Similarity=0.123 Sum_probs=171.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC------------CCchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR------------SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 134 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r------------~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~ 134 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++ .+..++..+.++..+.++.++++|++|++++++
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 68999999999999999999999999986665543 122334455566668899999999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
+++++.+++|+||+||||||+.. ... +.++|++++++|+.|++++.++++|+|++. ...++||++||+++..+
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~ 164 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ--GTGGSIVLISSSAGLAG 164 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCcEEEEEccHHhcCC
Confidence 99999999999999999999875 332 589999999999999999999999998542 23689999999999988
Q ss_pred C----CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh--hhHHHH----------hcCC
Q psy612 215 D----FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYFK----------SSKQ 278 (1005)
Q Consensus 215 ~----~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~~----------~~g~ 278 (1005)
. +++..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... ...... ....
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (278)
T 3sx2_A 165 VGSADPGSVGYVAAKHGVVGLMRVYANLLA--GQMIRVNSIHPSGVE-TPMINNEFTREWLAKMAAATDTPGAMGNAMPV 241 (278)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESCBS-STTTSSHHHHHHHHHHHHHCC--CTTSCSSSC
T ss_pred CccCCCCchHhHHHHHHHHHHHHHHHHHHh--ccCcEEEEEecCCcc-CccchhhhHHHHHhhccchhhhhhhhhhhcCc
Confidence 7 7889999999999999999887743 345688999888764 4443221100 000000 0012
Q ss_pred CCCCHHHHHHHHHHHHhc
Q psy612 279 KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 279 ~~l~~~~~~~~l~~~l~~ 296 (1005)
+..+++|..+.+..++..
T Consensus 242 ~~~~p~dvA~~v~~l~s~ 259 (278)
T 3sx2_A 242 EVLAPEDVANAVAWLVSD 259 (278)
T ss_dssp SSBCHHHHHHHHHHHTSG
T ss_pred CcCCHHHHHHHHHHHhCc
Confidence 456789999988877654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=236.01 Aligned_cols=221 Identities=13% Similarity=-0.003 Sum_probs=177.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHH-hCCCcEEEEEecCCCHH--------------
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSDKL-------------- 130 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~-------------- 130 (1005)
.+|++|||||++|||+++|+.|+++|++++++..|+ +..+++.++++ ..+.++.++++|++|++
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 87 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence 578999999999999999999999999766665254 44555666676 56778999999999999
Q ss_pred ---HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCC--------------HHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy612 131 ---KMISEINSIINNIGPIDGVLHIAGISGLTSNILEAN--------------YKNFYSVLSSKISGTIALNYALENTIL 193 (1005)
Q Consensus 131 ---~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t--------------~~~~~~~l~~kv~g~~~L~~~~~~~l~ 193 (1005)
+++++++++.+++|+||+||||||+.. ..++.+.+ .++|++++++|+.|+++++++++|+|+
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 88 LFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887 67788888 999999999999999999999999974
Q ss_pred HHhcCC------CcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch
Q psy612 194 KLQKNK------LDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE 267 (1005)
Q Consensus 194 ~~~~~~------~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~ 267 (1005)
+ .+ .++||++||+++..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|.. ++.| . ...
T Consensus 167 ~---~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v-~T~~-~-~~~ 238 (291)
T 1e7w_A 167 G---TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLS-VLVD-D-MPP 238 (291)
T ss_dssp T---SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSB-CCGG-G-SCH
T ss_pred h---cCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH--hcCeEEEEEeeCCc-cCCc-c-CCH
Confidence 3 23 58999999999999999999999999999999999887743 34568889988766 4556 2 211
Q ss_pred h-hhHHHHhcCC--CCCCHHHHHHHHHHHHhc
Q psy612 268 Q-TDFYFKSSKQ--KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 268 ~-~~~~~~~~g~--~~l~~~~~~~~l~~~l~~ 296 (1005)
. .........+ +..++++..+.+..++..
T Consensus 239 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~ 270 (291)
T 1e7w_A 239 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSS 270 (291)
T ss_dssp HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 1 1111222222 456899999999888753
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=231.46 Aligned_cols=218 Identities=14% Similarity=0.104 Sum_probs=172.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++ +.++.++++|++|+++++++++++.+++|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999996555543333333333333 6689999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| ++ .++||++||+++..+.++++.|+++|+
T Consensus 84 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y~asKa 157 (255)
T 4eso_A 84 DLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI---RE--GGSIVFTSSVADEGGHPGMSVYSASKA 157 (255)
T ss_dssp EEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EE--EEEEEEECCGGGSSBCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH---hc--CCEEEEECChhhcCCCCCchHHHHHHH
Confidence 99999999987 7889999999999999999999999999999874 22 478999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc--cch-hhh----HHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG--NNE-QTD----FYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~--~~~-~~~----~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|.+.. .|... ... ... .......+ +..+++|..+.+..++..
T Consensus 158 a~~~~~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 232 (255)
T 4eso_A 158 ALVSFASVLAAELL--PRGIRVNSVSPGFIDT-PTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE 232 (255)
T ss_dssp HHHHHHHHHHHHTG--GGTCEEEEEEECSBCC-SSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh--hhCcEEEEEecCcccC-cccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999988854 3456888998887743 33221 111 000 01111222 345789998888877653
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-26 Score=262.32 Aligned_cols=320 Identities=13% Similarity=0.088 Sum_probs=226.2
Q ss_pred EEEEeeccccCC-CCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChhh
Q psy612 465 IAIIGMSGRFPA-ARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLE 543 (1005)
Q Consensus 465 IaIvG~~~~~P~-~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~e 543 (1005)
+.|+||++.+|. -.+.++||+.+.... .+.|..+|... .+.. ..+..+ .+..+.+.|+ .+|++++++
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~-i~~~-----~GI~~R--~~~~~~~~~~-~~~~~~~r~ 77 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALR-LIEN-----TGVRTR--HIVQPIEDTL-EHPGFEDRN 77 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHH-HHHH-----TCCCEE--EESSCHHHHT-SCCCHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHH-HHHh-----cCCCcc--eeecChhhhc-cCCChhHHH
Confidence 689999999998 467899999876432 23443333211 1110 001111 2233345565 678899999
Q ss_pred hccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccc
Q psy612 544 AERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVM 621 (1005)
Q Consensus 544 a~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~ 621 (1005)
+...++..+++++++++||+|||++++++. +|++++... +. . ...+.+|++.||++| |++
T Consensus 78 ~~~~~~~~~la~~Aa~~aL~~agl~~~~id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lGl~~~~~~~ 139 (382)
T 1u0m_A 78 KVYEREAKSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM--------M-----PSLTAWLINEMGFDSTTRQI 139 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC--------S-----SCHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEecCC-CC--------C-----CcHHHHHHHHhCCCCCcceE
Confidence 998999999999999999999999887765 677776543 10 1 136789999999999 899
Q ss_pred cc-cccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC----CceecCccEE
Q psy612 622 AI-NTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVA 696 (1005)
Q Consensus 622 ~v-~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~----G~~~gEGa~~ 696 (1005)
.| +++|+|++.||++|++.|++|++|.+||+|++... +. .+|||.+.+ |+++|||+++
T Consensus 140 ~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------------~~~~d~~~~~~~~~~lfGDGA~A 202 (382)
T 1u0m_A 140 PIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC----------------YQPTDLGVGSLLCNGLFGDGIAA 202 (382)
T ss_dssp EECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG----------------CCTTCCSHHHHHHHHHBCEEEEE
T ss_pred EccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh----------------cCcccCCHHHhhccchhcCCcEE
Confidence 99 99999999999999999999999999999999742 21 134554433 8999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCCCC--------------CCCCCCC--HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDGKT--------------NGITAPN--GISQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~--------------~~~~~p~--~~~q~~~i~~al~~agi~~~~I~yve 760 (1005)
+||++.++ +|.+|++...+ .+.|+.. .+-..|+ ...+. +|+++|+++|++++||+||+
T Consensus 203 ~vL~~~~~---~g~~i~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~ 276 (382)
T 1u0m_A 203 AVVRGRGG---TGVRLERNGSY--LIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYI 276 (382)
T ss_dssp EEEETTTC---SEEEEEEEEEE--ECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCE
T ss_pred EEEeccCC---CCcEEEEeeeE--ecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEE
Confidence 99997654 44445544332 2334332 0111233 56778 99999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeE-eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccccc
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 839 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~ 839 (1005)
+|+++|++.|. +.+.++-.. ..+.+ .+++.++||+.+|+....|..++ +.+.+.|
T Consensus 277 ~H~~~~~i~d~-----~~~~lgl~~---~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~~------------- 332 (382)
T 1u0m_A 277 VHAGGPRILDD-----LSTFLEVDP---HAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVEE------------- 332 (382)
T ss_dssp EECSHHHHHHH-----HHHHSCSCG---GGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCCS-------------
T ss_pred ECCCCHHHHHH-----HHHHcCCCH---HHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCCC-------------
Confidence 99999987764 444554321 11222 35678899999999888776554 3332211
Q ss_pred CCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 840 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 840 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
....++.+||.|.+.+.++|+-
T Consensus 333 --------------------Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 333 --------------------GARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp --------------------SCCCEEEEEETTTEEEEEEEEE
T ss_pred --------------------CCEEEEEEEcccceeEEEEEEE
Confidence 1234688999999999999964
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=234.70 Aligned_cols=222 Identities=14% Similarity=0.168 Sum_probs=173.0
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||+||||+++|+.|+++|++++++.++.+..+++.+++... .++.++.+|++|+++++++++.+.+++|+||+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 89999999999999999999999987655544434444555555433 57899999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCc-EEEEecCcccccCCCCChhhhHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~-~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++. ..+ +||++||+++..+.+++..|+++|++
T Consensus 101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~---~~g~~IV~isS~~~~~~~~~~~~Y~asKaa 177 (272)
T 2nwq_A 101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH---GAGASIVNLGSVAGKWPYPGSHVYGGTKAF 177 (272)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeCCchhccCCCCCchHHHHHHH
Confidence 99999987523678899999999999999999999999999997542 346 89999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chhhhHHHH-hcCCCCCCHHHHHHHHHHHHhcc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFK-SSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~-~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.|++.++.+.. ..++++.+|.+|.+. +.|.... ........+ .....++++++..+.+..++..+
T Consensus 178 ~~~l~~~la~el~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 178 VEQFSLNLRCDLQ--GTGVRVTNLEPGLCE-SEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp HHHHHHHHHTTCT--TSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhC--ccCeEEEEEEcCCCc-CcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC
Confidence 9999999988743 445789999988775 4443211 000000000 11234689999999999888643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=229.75 Aligned_cols=221 Identities=12% Similarity=0.055 Sum_probs=170.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++|+.|+++|++++++. |+.. +...+.+++.+.++.++++|++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIAD-LVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc-CCch-hHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999998755554 4431 12223556667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+.+++..|+++|+
T Consensus 84 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (249)
T 2ew8_A 84 DILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN---GWGRIINLTSTTYWLKIEAYTHYISTKA 159 (249)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCeEEEEEcchhhccCCCCchhHHHHHH
Confidence 99999999877 6788999999999999999999999999999997542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccc-ccchhhhHHHHh--cC-CCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-GNNEQTDFYFKS--SK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-~~~~~~~~~~~~--~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|.+. +.|.. ..........+. .. -+..++++..+.+..++..
T Consensus 160 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~ 230 (249)
T 2ew8_A 160 ANIGFTRALASDLG--KDGITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASD 230 (249)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHH--hcCcEEEEEecCcCc-CccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCc
Confidence 99999999887743 334688899887664 34432 111000000110 11 1246788888888877653
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-24 Score=227.37 Aligned_cols=217 Identities=15% Similarity=0.152 Sum_probs=170.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++.. ++.+ +.++.+|++|+++++++++++.+++|++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA---EAVG--AHPVVMDVADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999987655544322222222 2234 6788999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+ +.+.++||++||++ ..+.+++..|+++|+
T Consensus 79 d~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~~~g~iv~isS~~-~~~~~~~~~Y~asK~ 153 (245)
T 1uls_A 79 DGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR---EKNPGSIVLTASRV-YLGNLGQANYAASMA 153 (245)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---TTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH---hcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence 99999999987 77889999999999999999999999999999853 34568999999999 889999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++..|++.++.+.. ..++++.+|.+|.. .+.|....... .........+ +..++++..+.+..++..
T Consensus 154 a~~~~~~~la~e~~--~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~ 222 (245)
T 1uls_A 154 GVVGLTRTLALELG--RWGIRVNTLAPGFI-ETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSD 222 (245)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHh--HhCeEEEEEEeCcC-cCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999887743 33568889987766 45554322111 1111122222 356899999988887754
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=227.46 Aligned_cols=223 Identities=16% Similarity=0.204 Sum_probs=178.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+|++|||||+||||++++++|+++|++++++..|+. ..+++.++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999998777666664 3445556666667789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.++||++||.++..+.+++..|+++|+
T Consensus 81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (244)
T 1edo_A 81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK---KRKGRIINIASVVGLIGNIGQANYAAAKA 156 (244)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh---cCCCEEEEECChhhcCCCCCCccchhhHH
Confidence 99999999987 678889999999999999999999999999999754 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........+ ....+++..+.+..++.++
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1edo_A 157 GVIGFSKTAAREGA--SRNINVNVVCPGFIA-SDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP 226 (244)
T ss_dssp HHHHHHHHHHHHHH--TTTEEEEEEEECSBC-SHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhh--hcCCEEEEEeeCccc-cchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999999887643 345688899988764 34432211111 111111111 2468899998888877443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-24 Score=231.55 Aligned_cols=186 Identities=16% Similarity=0.147 Sum_probs=159.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+..+++.++++.. +.++.++.+|++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999986555544334445555666554 678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.++...|+++|
T Consensus 86 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 161 (263)
T 3ai3_A 86 ADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR---GGGAIIHNASICAVQPLWYEPIYNVTK 161 (263)
T ss_dssp CSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECchhhcCCCCCcchHHHHH
Confidence 999999999887 6788899999999999999999999999999997542 468899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++++.|++.++.+.. ..++++.+|.+|....
T Consensus 162 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t 192 (263)
T 3ai3_A 162 AALMMFSKTLATEVI--KDNIRVNCINPGLILT 192 (263)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEecCcccC
Confidence 999999999887643 3345888998876643
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=230.11 Aligned_cols=224 Identities=14% Similarity=0.093 Sum_probs=176.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.+.+|++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999865555444344556667777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 169 (260)
T 2zat_A 93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEK---RGGGSVLIVSSVGAYHPFPNLGPYNVSKT 169 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence 999999998642467889999999999999999999999999999753 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|... ............. .+...+++..+.+..++..
T Consensus 170 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 240 (260)
T 2zat_A 170 ALLGLTKNLAVELA--PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240 (260)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSG
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEEECccc-CccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999999887743 334588888877664 334221 0000011111111 2346788888877776643
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-25 Score=238.41 Aligned_cols=221 Identities=13% Similarity=0.093 Sum_probs=172.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC---CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~---~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+.. +..+++.++++..+.++.+++||++|+++++++++++.+++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999766654322 23455666777778899999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| + +.++||++||+++..+.++++.|++
T Consensus 90 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m---~--~~g~iv~isS~~~~~~~~~~~~Y~a 163 (262)
T 3ksu_A 90 GKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM---N--PNGHIITIATSLLAAYTGFYSTYAG 163 (262)
T ss_dssp CSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE---E--EEEEEEEECCCHHHHHHCCCCC---
T ss_pred CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh---c--CCCEEEEEechhhccCCCCCchhHH
Confidence 99999999999987 7889999999999999999999999999999875 2 3578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHHHHh-cCCCCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKS-SKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~-~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ........ ..-+..++++..+.+..++..
T Consensus 164 sKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 164 NKAPVEHYTRAASKELM--KQQISVNAIAPGPMD-TSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp --CHHHHHHHHHHHHTT--TTTCEEEEEEECCCC-THHHHTCC------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH--HcCcEEEEEeeCCCc-CccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 99999999999988854 445788999888764 444322111 11111111 112346789999888887754
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-24 Score=233.25 Aligned_cols=223 Identities=13% Similarity=0.139 Sum_probs=177.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+..++..+++++.+.++.++.||++|+++++++++++.+++|++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999876555444444556667777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHH--HHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENT--ILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~--l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|. |++. +.++||++||+++..+.+++..|+++
T Consensus 101 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 176 (277)
T 2rhc_B 101 DVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER---GTGRIVNIASTGGKQGVVHAAPYSAS 176 (277)
T ss_dssp SEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH---TEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc---CCeEEEEECccccccCCCCCccHHHH
Confidence 99999999877 678889999999999999999999999999998 7542 35789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCC-CCCCHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~~~~~~l~ 291 (1005)
|++++.|++.++.+.. ..++++.+|.+|.+. +.|.... ............+ +..++++..+.+.
T Consensus 177 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~ 253 (277)
T 2rhc_B 177 KHGVVGFTKALGLELA--RTGITVNAVCPGFVE-TPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 253 (277)
T ss_dssp HHHHHHHHHHHHHHHT--TTEEEEEEEEECSBC-SHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhCcEEEEEecCcCc-CchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999887643 334588899887664 3342211 0000111111122 3467888888887
Q ss_pred HHHhc
Q psy612 292 QLLIQ 296 (1005)
Q Consensus 292 ~~l~~ 296 (1005)
.++..
T Consensus 254 ~l~s~ 258 (277)
T 2rhc_B 254 YLIGP 258 (277)
T ss_dssp HHHSG
T ss_pred HHhCc
Confidence 77653
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=228.17 Aligned_cols=223 Identities=14% Similarity=0.122 Sum_probs=169.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|++|+++|+++++ +.|+ +..+++.+ +.+.++.++.+|++|.++++++++++.+++|+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVI-VDRDKAGAERVAG---EIGDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHH---HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999987554 4554 33333333 33678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ-KNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~-~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|+||||||+......+.+.+.++|++++++|+.|++++.++++|+|++.. ....++||++||.++..+.++++.|+++
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 163 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNAT 163 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHH
Confidence 999999999875356788899999999999999999999999999987543 2336789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..++++..+.+..++..
T Consensus 164 Kaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (261)
T 3n74_A 164 KGWVVSVTKALAIELA--PAKIRVVALNPVAGE-TPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP 238 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEecCccc-ChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence 9999999999988754 345688888877654 3332211 1111111111112 356899999988887753
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-24 Score=231.61 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=178.8
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
++|++|||||+ +|||+++|++|+++|++++++.++.... ++..+++.+ .+.++.+++||++|+++++++++++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 58999999999 9999999999999999877776666544 556666653 4788999999999999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--CCChh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCD 220 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--~g~~~ 220 (1005)
+|+||+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+. +++..
T Consensus 99 ~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~~ 174 (267)
T 3gdg_A 99 FGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER---GTGSLVITASMSGHIANFPQEQTS 174 (267)
T ss_dssp TSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCSSSCCHH
T ss_pred cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc---CCceEEEEccccccccCCCCCCCc
Confidence 999999999999987 7778999999999999999999999999999997542 45789999999998886 68899
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-HhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|++++.|++.++.+.. .. +++.+|.+|.. .+.|...........+ ....+ +..+++|..+.+..++..
T Consensus 175 Y~~sK~a~~~~~~~la~e~~--~~-i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~ 248 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWR--DF-ARVNSISPGYI-DTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASD 248 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--TT-CEEEEEEECCE-ECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHST
T ss_pred chHHHHHHHHHHHHHHHHhc--cC-cEEEEEECCcc-ccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecC
Confidence 99999999999999988753 22 68888987766 4555433222222111 11122 234588888888877754
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=233.20 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=162.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..+++.++++..+.++.++.||++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999876555444444556667777777889999999999999999999999999999
Q ss_pred cEEEEcCccc-CccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~-~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||+. . ..++.+.+.++|++++++|+.|+++++++++|+|++. ..++||++||+++..+.+++..|+++|
T Consensus 86 d~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 161 (262)
T 1zem_A 86 DFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ---NYGRIVNTASMAGVKGPPNMAAYGTSK 161 (262)
T ss_dssp CEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred CEEEECCCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhccCCCCCchHHHHH
Confidence 9999999987 5 6788999999999999999999999999999997542 458999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 261 (1005)
+++..|++.++.+.. ..++++.+|.+|.+ ++.|
T Consensus 162 ~a~~~~~~~la~e~~--~~gi~vn~v~PG~v-~t~~ 194 (262)
T 1zem_A 162 GAIIALTETAALDLA--PYNIRVNAISPGYM-GPGF 194 (262)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSB-CSSH
T ss_pred HHHHHHHHHHHHHHH--hhCeEEEEEecCCc-Ccch
Confidence 999999999887643 34568889988765 4444
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=231.67 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=171.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+..++.. ++.+.++.++.+|++|+++++++++++.+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA---RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999987555544333222222 2335678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|++. +.++||++||+++..+.++...|+++|+
T Consensus 81 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 156 (254)
T 1hdc_A 81 DGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA---GGGSIVNISSAAGLMGLALTSSYGASKW 156 (254)
T ss_dssp CEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEECchhhccCCCCchhHHHHHH
Confidence 99999999877 6778899999999999999999999999999997642 4689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHHHHhcCC-CCC-CHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSSKQ-KVL-HENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~g~-~~l-~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|..... ...........+ +.. ++++..+.+..++..
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~ 226 (254)
T 1hdc_A 157 GVRGLSKLAAVELG--TDRIRVNSVHPGMTY-TPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecccCc-CccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999887743 335688888887664 33321100 000000111111 234 899999998888754
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-24 Score=228.63 Aligned_cols=220 Identities=15% Similarity=0.162 Sum_probs=176.6
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecC--CCHHHHHHHHHHHHhh
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDV--SDKLKMISEINSIINN 142 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dv--td~~~v~~~~~~i~~~ 142 (1005)
-++|++|||||++|||+++|++|+++|++++++.++.+..++..++++..+ .++.++.+|+ +|.++++++++++.+.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 368999999999999999999999999975555444455566777777665 5677777777 9999999999999999
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
+|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+| .+.+.++||++||+++..+.++.+.|+
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~~iv~isS~~~~~~~~~~~~Y~ 168 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLL---KRSEDASIAFTSSSVGRKGRANWGAYG 168 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTSSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---HhCCCCeEEEEcchhhcCCCCCcchhH
Confidence 99999999999986536788999999999999999999999999999985 445678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++|++++.|++.++.+.. +..++++.+|.+|.. ++.|...... ........+++|..+.+..++..
T Consensus 169 ~sK~a~~~~~~~la~e~~-~~~~i~v~~v~PG~v-~t~~~~~~~~------~~~~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 169 VSKFATEGLMQTLADELE-GVTAVRANSINPGAT-RTGMRAQAYP------DENPLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp HHHHHHHHHHHHHHHHHT-TTSSEEEEEEECCCC-SSHHHHHHST------TSCGGGSCCGGGGTHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcc-cCccchhccc------ccCccCCCCHHHHHHHHHHHhCc
Confidence 999999999999988742 114578889988766 4444321110 01112346788888888776653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=236.59 Aligned_cols=223 Identities=13% Similarity=0.077 Sum_probs=176.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~--~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.. ..+++.+.+++.+.++.++.||++|+++++++++++.+++|
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999997666554422 23455566677788999999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.+++..|+++
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----~~g~Iv~isS~~~~~~~~~~~~Y~as 202 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP-----KGASIITTSSIQAYQPSPHLLDYAAT 202 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC-----TTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-----cCCEEEEECChhhccCCCCchHHHHH
Confidence 9999999999865356789999999999999999999999999998752 24799999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++++|++.++.+.. ..++++.+|.+|.... .|... .............+ +..+++|..+.+..++...
T Consensus 203 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~ 276 (294)
T 3r3s_A 203 KAAILNYSRGLAKQVA--EKGIRVNIVAPGPIWT-ALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE 276 (294)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCS-HHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEecCcCcc-ccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999988754 3356888998887643 33111 11111111111111 3457888888888776543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=232.36 Aligned_cols=225 Identities=12% Similarity=0.039 Sum_probs=175.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHH-hCCCcEEEEEecCCC----HHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSD----KLKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~-~~g~~v~~~~~Dvtd----~~~v~~~~~~i~ 140 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. +..+++.++++ ..+.++.++.+|++| +++++++++++.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 579999999999999999999999999766665555 45556666676 567789999999999 999999999999
Q ss_pred hhcCCccEEEEcCcccCccchh-----cc-----CCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc---CCCcEEEEec
Q psy612 141 NNIGPIDGVLHIAGISGLTSNI-----LE-----ANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFS 207 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~-----~~-----~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~---~~~~~iV~~S 207 (1005)
+.+|+||+||||||+.. ..++ .+ .+.++|++++++|+.|++++.++++|+|++... ...++||++|
T Consensus 102 ~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 102 RAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 99999999999999876 5556 66 889999999999999999999999998643210 0157999999
Q ss_pred CcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCC-C-CCHHH
Q psy612 208 SSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK-V-LHEND 285 (1005)
Q Consensus 208 Sia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~-~-l~~~~ 285 (1005)
|+++..+.+++..|+++|+++..|++.++.+.. ..++++.+|.+|... +.| ...............+. . .++++
T Consensus 181 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~-~~~~~~~~~~~~~~p~~r~~~~ped 256 (288)
T 2x9g_A 181 DAMVDQPCMAFSLYNMGKHALVGLTQSAALELA--PYGIRVNGVAPGVSL-LPV-AMGEEEKDKWRRKVPLGRREASAEQ 256 (288)
T ss_dssp CTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSCS-CCT-TSCHHHHHHHHHTCTTTSSCCCHHH
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHhh--ccCeEEEEEEecccc-Ccc-ccChHHHHHHHhhCCCCCCCCCHHH
Confidence 999999999999999999999999999887743 334688899887664 445 21111111122222222 3 68999
Q ss_pred HHHHHHHHHhc
Q psy612 286 GLKLFEQLLIQ 296 (1005)
Q Consensus 286 ~~~~l~~~l~~ 296 (1005)
..+.+..++..
T Consensus 257 vA~~v~~l~s~ 267 (288)
T 2x9g_A 257 IADAVIFLVSG 267 (288)
T ss_dssp HHHHHHHHHSG
T ss_pred HHHHHHHHhCc
Confidence 99999888754
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-24 Score=232.85 Aligned_cols=222 Identities=14% Similarity=0.077 Sum_probs=175.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~---~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..++++..+. ++.++.+|++|+++++++++++.+++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999998765554444445566667766665 89999999999999999999999999
Q ss_pred CCccEEEEcCcccCccch----hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCC
Q psy612 144 GPIDGVLHIAGISGLTSN----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FGS 218 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~----~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~g~ 218 (1005)
|++|+||||||+.. ..+ +.+.+.++|++++++|+.|++++.++++|+|++. . ++||++||+++..+. ++.
T Consensus 85 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~-g~iv~isS~~~~~~~~~~~ 159 (280)
T 1xkq_A 85 GKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS---K-GEIVNVSSIVAGPQAQPDF 159 (280)
T ss_dssp SCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCGGGSSSCCCSS
T ss_pred CCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC---C-CcEEEecCccccCCCCCcc
Confidence 99999999999876 555 7889999999999999999999999999997532 2 889999999999888 899
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chh----hhHHHHh----cC-CCCCCHHHHH
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ----TDFYFKS----SK-QKVLHENDGL 287 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~----~~~~~~~----~g-~~~l~~~~~~ 287 (1005)
..|+++|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+. .. -+..++++..
T Consensus 160 ~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA 236 (280)
T 1xkq_A 160 LYYAIAKAALDQYTRSTAIDLA--KFGIRVNSVSPGMVE-TGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA 236 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhc--cCCeEEEEEeeCcCc-CCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHH
Confidence 9999999999999999887643 345688999887664 4443211 000 0001111 11 1346899999
Q ss_pred HHHHHHHhc
Q psy612 288 KLFEQLLIQ 296 (1005)
Q Consensus 288 ~~l~~~l~~ 296 (1005)
+.+..++..
T Consensus 237 ~~v~~l~s~ 245 (280)
T 1xkq_A 237 NIILFLADR 245 (280)
T ss_dssp HHHHHHHCH
T ss_pred HHHHHhcCc
Confidence 988887754
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=225.34 Aligned_cols=217 Identities=17% Similarity=0.129 Sum_probs=178.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCc------EEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYST------NLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~------~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
+|++|||||+||||++++++|+++|+. .|+++.|+ +..+++.++++..+.++.++.+|++|+++++++++++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 689999999999999999999999983 55566665 34455566676667889999999999999999999999
Q ss_pred hhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++...
T Consensus 82 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~ 157 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER---QHSGHIFFITSVAATKAFRHSSI 157 (244)
T ss_dssp HHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTCHH
T ss_pred HhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---CCCCEEEEEecchhcCCCCCCch
Confidence 99999999999999987 778889999999999999999999999999999754 24689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
|+++|++++.|++.++.+.. ..++++.+|.+|.+. +.|........ ....+++++..+.+..++..+.
T Consensus 158 Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 158 YCMSKFGQRGLVETMRLYAR--KCNVRITDVQPGAVY-TPMWGKVDDEM-------QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-STTTCCCCSTT-------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred hHHHHHHHHHHHHHHHHHhh--ccCcEEEEEECCCcc-chhhhhccccc-------cccCCCHHHHHHHHHHHHhCCc
Confidence 99999999999998876533 345688899988664 44432211110 1246899999999998887543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=235.48 Aligned_cols=222 Identities=14% Similarity=0.087 Sum_probs=176.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~---~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..+++...+. ++.++.+|++|+++++++++++.+++
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999765554443445566667776666 89999999999999999999999999
Q ss_pred CCccEEEEcCcccCccch--hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCChh
Q psy612 144 GPIDGVLHIAGISGLTSN--ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~--~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~g~~~ 220 (1005)
|++|+||||||+.. ..+ +.+.+.++|++++++|+.|+++++++++|.|++ .. ++||++||+++..+. ++...
T Consensus 105 g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~-g~IV~isS~~~~~~~~~~~~~ 179 (297)
T 1xhl_A 105 GKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK---TK-GEIVNVSSIVAGPQAHSGYPY 179 (297)
T ss_dssp SCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TT-CEEEEECCGGGSSSCCTTSHH
T ss_pred CCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh---cC-CEEEEEcCchhccCCCCCcch
Confidence 99999999999876 556 889999999999999999999999999999753 23 899999999999988 99999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chh----hhHHHHh----cC-CCCCCHHHHHHH
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ----TDFYFKS----SK-QKVLHENDGLKL 289 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~----~~~~~~~----~g-~~~l~~~~~~~~ 289 (1005)
|+++|+++..|++.++.+.. ..++++.+|.+|.+. +.|.... ... ....... .. -+..++++..+.
T Consensus 180 Y~asKaa~~~l~~~la~el~--~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 256 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLI--QHGVRVNSVSPGAVA-TGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANI 256 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCCCc-CccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999887643 345688999988664 4443211 000 0001111 11 134688999998
Q ss_pred HHHHHhc
Q psy612 290 FEQLLIQ 296 (1005)
Q Consensus 290 l~~~l~~ 296 (1005)
+..++..
T Consensus 257 v~~l~s~ 263 (297)
T 1xhl_A 257 IVFLADR 263 (297)
T ss_dssp HHHHHCH
T ss_pred HHHHhCC
Confidence 8887754
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-24 Score=230.03 Aligned_cols=222 Identities=9% Similarity=-0.006 Sum_probs=172.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++.. +.++.++.+|++|+++++++++++.+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999987555544334445555566543 44789999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. ..++||++||+++..+.+++..|+++
T Consensus 86 -id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (260)
T 2z1n_A 86 -ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK---GWGRMVYIGSVTLLRPWQDLALSNIM 160 (260)
T ss_dssp -CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred -CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECchhhcCCCCCCchhHHH
Confidence 999999999876 6788999999999999999999999999999997542 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc----------ccchh--hhHHHHhcCC-CCCCHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI----------GNNEQ--TDFYFKSSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~----------~~~~~--~~~~~~~~g~-~~l~~~~~~~~l~ 291 (1005)
|+++..|++.++.+.. ..++++.+|.+|... +.|.. ..... .........+ +..++++..+.+.
T Consensus 161 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~ 237 (260)
T 2z1n_A 161 RLPVIGVVRTLALELA--PHGVTVNAVLPSLIL-TDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVA 237 (260)
T ss_dssp THHHHHHHHHHHHHHG--GGTEEEEEEEECHHH-HCCCC-----------------------CCTTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEEEECCcc-cchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 9999999999887743 334688888877553 34432 10000 0111111111 2347888888888
Q ss_pred HHHhc
Q psy612 292 QLLIQ 296 (1005)
Q Consensus 292 ~~l~~ 296 (1005)
.++..
T Consensus 238 ~l~s~ 242 (260)
T 2z1n_A 238 FLASE 242 (260)
T ss_dssp HHTSG
T ss_pred HHhCc
Confidence 77654
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-24 Score=233.03 Aligned_cols=224 Identities=13% Similarity=0.076 Sum_probs=176.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++ .|+ +..++..++++..+ ++.++.+|++|+++++++++++.+.+|+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFIC-ARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 57999999999999999999999999875554 554 44455566665555 7889999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCCh-hhhH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK-NKLDFVCYFSSSSAILGDFGSC-DYAM 223 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~-~~~~~iV~~SSia~~~g~~g~~-~Yaa 223 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++... .+.++||++||+++..+.++.. .|++
T Consensus 106 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 184 (276)
T 2b4q_A 106 LDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP 184 (276)
T ss_dssp CSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence 999999999887 677889999999999999999999999999999864321 1238999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHH--hcCC-CCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFK--SSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~--~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++.+|.+|... +.|........ ..... ...+ +..++++.++.+..++..
T Consensus 185 sK~a~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 258 (276)
T 2b4q_A 185 SKAALHQLSRMLAKELV--GEHINVNVIAPGRFP-SRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGT 258 (276)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-STTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEEeccCc-CcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCc
Confidence 99999999999887743 335688899887664 44432111000 11111 1122 346889999988887754
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=228.61 Aligned_cols=215 Identities=14% Similarity=0.065 Sum_probs=166.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+.. .+.+++.+ +.++.+|++|+++++++++++.+++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS---VTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH---HHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999866665554432 33444434 6789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ... .+.+.++|++++++|+.|++++.++++|+|+ +.+.++||++||+++..+.++...|+++|+
T Consensus 101 D~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~---~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 175 (260)
T 3gem_A 101 RAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLT---ASEVADIVHISDDVTRKGSSKHIAYCATKA 175 (260)
T ss_dssp SEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHH---TSSSCEEEEECCGGGGTCCSSCHHHHHHHH
T ss_pred CEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCcEEEEECChhhcCCCCCcHhHHHHHH
Confidence 99999999876 444 6678899999999999999999999999964 345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+... ++++.+|.+|.+.. .|.... ...........+ +..+++|..+.+..++..
T Consensus 176 a~~~l~~~la~e~~~---~Irvn~v~PG~v~t-~~~~~~-~~~~~~~~~~p~~r~~~~edva~~v~~L~~~ 241 (260)
T 3gem_A 176 GLESLTLSFAARFAP---LVKVNGIAPALLMF-QPKDDA-AYRANALAKSALGIEPGAEVIYQSLRYLLDS 241 (260)
T ss_dssp HHHHHHHHHHHHHTT---TCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC---CCEEEEEeeccccc-CCCCCH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhhC
Confidence 999999999887542 37888998887643 332211 111111222222 234688999888888743
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-24 Score=229.86 Aligned_cols=224 Identities=13% Similarity=0.121 Sum_probs=174.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||++|||+++|++|+++|++++++.++.... +...+.++..+.++.++.||++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999877766666433 3334444455678999999999999999999999999999
Q ss_pred ccEEEEcCc--ccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCc-cc-ccCCCCChhh
Q psy612 146 IDGVLHIAG--ISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS-SA-ILGDFGSCDY 221 (1005)
Q Consensus 146 idgvIh~AG--~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSi-a~-~~g~~g~~~Y 221 (1005)
+|+|||||| ... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||. ++ ..+.++.+.|
T Consensus 86 id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~g~iv~iss~~~~~~~~~~~~~~Y 161 (264)
T 3i4f_A 86 IDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK---QNFGRIINYGFQGADSAPGWIYRSAF 161 (264)
T ss_dssp CCEEECCCCCCCCS-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred CCEEEECCcccccC-CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh---cCCCeEEEEeechhcccCCCCCCchh
Confidence 999999999 444 577899999999999999999999999999999754 246889999998 44 5677889999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH-HHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++|+++++|++.++.+.. ..++++.+|.+|... +.|.......... ......+ +..+++|.++.+..++...
T Consensus 162 ~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~ 236 (264)
T 3i4f_A 162 AAAKVGLVSLTKTVAYEEA--EYGITANMVCPGDII-GEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDD 236 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-GGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEccCCcc-CccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999999887743 345688899887664 4443322211111 1111111 2457899999998887644
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-24 Score=231.42 Aligned_cols=221 Identities=13% Similarity=0.035 Sum_probs=171.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEec-CCCchHHHHHHHHhC-CCcEEEEEecCCCH----HHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSG-RSKLNSIIYKKLKKF-NNKAIYIQVDVSDK----LKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~-r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~----~~v~~~~~~i~ 140 (1005)
.+|++|||||+||||+++|+.|+++|++++++.+ +.+..+++.+++++. +.++.++.+|++|+ ++++++++++.
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 5789999999999999999999999987665555 333445566666655 67899999999999 99999999999
Q ss_pred hhcCCccEEEEcCcccCccchhccCCH-----------HHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC------cEE
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANY-----------KNFYSVLSSKISGTIALNYALENTILKLQKNKL------DFV 203 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~-----------~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~------~~i 203 (1005)
+++|++|+||||||+.. ..++.+.+. ++|++++++|+.|++++.++++|+|+ ... ++|
T Consensus 90 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~----~~~~~~~~~g~i 164 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG----EGGAWRSRNLSV 164 (276)
T ss_dssp HHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-----------CCCEEE
T ss_pred HhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh----cCCCCCCCCcEE
Confidence 99999999999999876 667788888 99999999999999999999999863 123 799
Q ss_pred EEecCcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-C-CC
Q psy612 204 CYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-K-VL 281 (1005)
Q Consensus 204 V~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~-~l 281 (1005)
|++||+++..+.+++..|+++|+++..|++.++.+.. ..++++.+|.+|..... ... .............+ + ..
T Consensus 165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~v~~v~PG~v~t~-~~~-~~~~~~~~~~~~p~~r~~~ 240 (276)
T 1mxh_A 165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA--PRHIRVNAVAPGLSLLP-PAM-PQETQEEYRRKVPLGQSEA 240 (276)
T ss_dssp EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBSCC-SSS-CHHHHHHHHTTCTTTSCCB
T ss_pred EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCcccCC-ccC-CHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999999887743 33468899998877543 111 11111111122222 2 56
Q ss_pred CHHHHHHHHHHHHhc
Q psy612 282 HENDGLKLFEQLLIQ 296 (1005)
Q Consensus 282 ~~~~~~~~l~~~l~~ 296 (1005)
++++..+.+..++..
T Consensus 241 ~~~dva~~v~~l~s~ 255 (276)
T 1mxh_A 241 SAAQIADAIAFLVSK 255 (276)
T ss_dssp CHHHHHHHHHHHHSG
T ss_pred CHHHHHHHHHHHhCc
Confidence 899999998887754
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=227.73 Aligned_cols=184 Identities=14% Similarity=0.146 Sum_probs=160.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|+++++ +.|+.. ++..++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVL-NGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-ECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999986555 455544 55667777777789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 81 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 156 (255)
T 2q2v_A 81 DILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA---RNWGRIINIASVHGLVGSTGKAAYVAAKH 156 (255)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence 99999999876 678889999999999999999999999999999753 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++..|++.++.+.. ..++++.+|.+|....
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t 186 (255)
T 2q2v_A 157 GVVGLTKVVGLETA--TSNVTCNAICPGWVLT 186 (255)
T ss_dssp HHHHHHHHHHHHTT--TSSEEEEEEEESSBCC
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEeeCCCcC
Confidence 99999999988743 3456888998877643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=235.91 Aligned_cols=225 Identities=12% Similarity=-0.005 Sum_probs=177.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHH-hCCCcEEEEEecCCCHH--------------
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSDKL-------------- 130 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~-------------- 130 (1005)
.+|++|||||++|||+++|+.|+++|++++++..|+ +..+++.++++ ..+.++.++++|++|++
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 124 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 124 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence 579999999999999999999999999766665254 44455666665 55778999999999999
Q ss_pred ---HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCC--------------HHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy612 131 ---KMISEINSIINNIGPIDGVLHIAGISGLTSNILEAN--------------YKNFYSVLSSKISGTIALNYALENTIL 193 (1005)
Q Consensus 131 ---~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t--------------~~~~~~~l~~kv~g~~~L~~~~~~~l~ 193 (1005)
+++++++++.+++|+||+||||||+.. ..++.+.+ .++|++++++|+.|+++++++++|+|+
T Consensus 125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 125 LFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999877 67778888 999999999999999999999999975
Q ss_pred HHh---cCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh
Q psy612 194 KLQ---KNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD 270 (1005)
Q Consensus 194 ~~~---~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~ 270 (1005)
+.. ....++||++||+++..+.+++..|+++|+++..|++.++.+.. ..++++.+|.+|... +.| ........
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~-T~~-~~~~~~~~ 279 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLSV-LVD-DMPPAVWE 279 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-CCC-CSCHHHHH
T ss_pred hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-CCc-cccHHHHH
Confidence 321 00158999999999999999999999999999999999888743 335688899887664 455 22111111
Q ss_pred HHHHhcCC--CCCCHHHHHHHHHHHHhc
Q psy612 271 FYFKSSKQ--KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 271 ~~~~~~g~--~~l~~~~~~~~l~~~l~~ 296 (1005)
.......+ ...++++..+.+..++..
T Consensus 280 ~~~~~~p~~~r~~~pedvA~~v~~l~s~ 307 (328)
T 2qhx_A 280 GHRSKVPLYQRDSSAAEVSDVVIFLCSS 307 (328)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHHHhCc
Confidence 11222222 456899999999888753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=225.84 Aligned_cols=218 Identities=11% Similarity=0.120 Sum_probs=170.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+. ++..+++. + .++.+|++|+++++++++++.+++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999865555444333 44444442 4 788999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +.+.++||++||+++..+.++...|+++|+
T Consensus 79 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~---~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 154 (256)
T 2d1y_A 79 DVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR---KVGGGAIVNVASVQGLFAEQENAAYNASKG 154 (256)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH---TTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---hcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence 99999999887 67888999999999999999999999999999964 345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-------cchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|... ............. -+..++++..+.+..++..+
T Consensus 155 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~ 230 (256)
T 2d1y_A 155 GLVNLTRSLALDLA--PLRIRVNAVAPGAIA-TEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK 230 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEeeCCcc-CchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999887743 335688889887664 333211 0011111111111 13568899998888877543
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-25 Score=256.78 Aligned_cols=325 Identities=13% Similarity=0.103 Sum_probs=226.7
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 540 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 540 (1005)
..+|.|+|+++.+|.. .+.++||+.+....+ .+.|..||+...+ ... .+..++. ..++ ..||+.||+++
T Consensus 11 ~~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~i~-~~~-----Gi~~R~~-~~~~-~~~~~~~~~~~ 80 (374)
T 2h84_A 11 NNNSFVLGIGISVPGEPISQQSLKDSISNDFS--DKAETNEKVKRIF-EQS-----QIKTRHL-VRDY-TKPENSIKFRH 80 (374)
T ss_dssp -CCCEEEEEEEECSSSCEEHHHHHHHHHHHSC--SCHHHHHHHHHHH-HTT-----CCCEECC-SSCT-TSGGGCGGGGG
T ss_pred CCCeEEEEEEEeCCCcccCHHHHHHHHHHhhc--cChHHHHHHHHHH-HhC-----CcCccee-ecCc-cccccccccCC
Confidence 3468999999999985 678999998865332 2333344432211 110 1111110 1122 36899999999
Q ss_pred hhhhccC-----CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhC
Q psy612 541 PLEAERM-----DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMD 615 (1005)
Q Consensus 541 ~~ea~~m-----dpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~ 615 (1005)
+.+...+ ++..+++++++++||+|||++++++. +|++|+..+ +. . ...+.++++.||
T Consensus 81 ~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lG 142 (374)
T 2h84_A 81 LETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT----HIVSVTSTG-II--------I-----PDVNFKLIDLLG 142 (374)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-CC--------S-----SCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC--------C-----CcHHHHHHHHcC
Confidence 9999988 89999999999999999999988776 678887542 10 1 126789999999
Q ss_pred CCC--Cccccc-ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCC--CCCcee
Q psy612 616 LKG--PVMAIN-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER--ANGLVP 690 (1005)
Q Consensus 616 l~G--ps~~v~-taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~--a~G~~~ 690 (1005)
++| |++.|. ++|+|++.||++|++.|++|++|.+||+|++.+. +. +. .++|.+ .+|+++
T Consensus 143 l~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~---------~~------~~~dr~~~~~~~lf 206 (374)
T 2h84_A 143 LNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LH---------FS------NTDGGDQMVASSIF 206 (374)
T ss_dssp CCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GG---------CC------CSSSHHHHHHHHHB
T ss_pred cCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh---------hc------CCCCHHHHhhhhhh
Confidence 998 899996 8999999999999999999999999999999742 11 00 122222 258999
Q ss_pred cCccEEEEEcccchhhcCCCceEEEEEEeeec--cCCC--------CCC------CCCCC--HHHHHHHHHHHHHHcC--
Q psy612 691 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN--YDGK--------TNG------ITAPN--GISQTELIKSVYKKSN-- 750 (1005)
Q Consensus 691 gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~--~dG~--------~~~------~~~p~--~~~q~~~i~~al~~ag-- 750 (1005)
|||++++||++.+++..+ .++ .|.+.+.. .++. ..+ ...|+ ...+.++|+++|+++|
T Consensus 207 GDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~ 283 (374)
T 2h84_A 207 ADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQ 283 (374)
T ss_dssp CCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999988776433 355 55554432 1211 011 11222 3568889999999999
Q ss_pred ----CCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHhhcCCCC
Q psy612 751 ----LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIP 825 (1005)
Q Consensus 751 ----i~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l~~~~ip 825 (1005)
++++||+|| +|++++++.|.++ +.++-.. ..+.+. .+...+||+.+|+-...|..++ +.+. |
T Consensus 284 ~~~~l~~~did~~-~H~~~~~i~d~~~-----~~lgl~~---~k~~~s~~~~~~~Gnt~sasi~~~L~~~~---~~~~-~ 350 (374)
T 2h84_A 284 TSTAISAKDCEFL-IHTGGKSILMNIE-----NSLGIDP---KQTKNTWDVYHAYGNMSSASVIFVMDHAR---KSKS-L 350 (374)
T ss_dssp SCSCCCSSSSEEE-ECCCCHHHHHHHH-----HHTTCCG---GGGHHHHHHHHHHCBCTTHHHHHHHHHHH---TCSC-C
T ss_pred cccCCChhhcCEe-ECCCCHHHHHHHH-----HHcCCCH---HHHHHHHHHHHHhCCchhhHHHHHHHHHH---hhcC-C
Confidence 999999999 9999998776544 4554321 123332 4567789999998777665543 2221 0
Q ss_pred CCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 826 ASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 826 p~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.++.+||.|-+-+.++|+
T Consensus 351 ----------------------------------Gd~vll~~~G~G~t~~~~ll~ 371 (374)
T 2h84_A 351 ----------------------------------PTYSISLAFGPGLAFEGCFLK 371 (374)
T ss_dssp ----------------------------------CSEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------------------CCeEEEEEeccchhhhhhhhe
Confidence 124568899999999888886
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=227.58 Aligned_cols=221 Identities=12% Similarity=0.129 Sum_probs=172.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++++.|+++|+++++ +.|+. ..++..+++ +.++.++++|++|+++++++++.+.+++|+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999986554 45543 333333333 667899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|.|+ +.. ++||++||+++..+.+++..|+++|
T Consensus 81 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~~-g~iv~isS~~~~~~~~~~~~Y~~sK 155 (253)
T 1hxh_A 81 LNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK---ETG-GSIINMASVSSWLPIEQYAGYSASK 155 (253)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT---TTC-EEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHH---HcC-CEEEEEcchhhcCCCCCCccHHHHH
Confidence 999999999986 67888999999999999999999999999999863 334 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc--cchhhhH-HHH---hcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG--NNEQTDF-YFK---SSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~--~~~~~~~-~~~---~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+....+.++++.+|.+|.... .|... ....... ... ... .+..++++..+.+..++..+
T Consensus 156 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 233 (253)
T 1hxh_A 156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT-PMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE 233 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC-HHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccC-chhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCcc
Confidence 999999999887633221245889998876643 33211 0011111 111 111 12458899999888877543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=229.18 Aligned_cols=215 Identities=11% Similarity=0.102 Sum_probs=170.8
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
..++|++|||||++|||+++|+.|+++|++++++.++.+.. ...+.++++|++|+++++++++++.+++|
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34789999999999999999999999999766554443221 12467789999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+++..+.++++.|+++
T Consensus 81 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~as 156 (269)
T 3vtz_A 81 RIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLA---IGHGSIINIASVQSYAATKNAAAYVTS 156 (269)
T ss_dssp CCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCCEEEEECchhhccCCCCChhHHHH
Confidence 9999999999987 788999999999999999999999999999999754 246889999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCC-CCCCHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~~~~~~l~ 291 (1005)
|++++.|++.++.+.. . ++++.+|.+|... +.|.... ............+ +..+++|..+.+.
T Consensus 157 Kaa~~~l~~~la~e~~--~-~i~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 232 (269)
T 3vtz_A 157 KHALLGLTRSVAIDYA--P-KIRCNAVCPGTIM-TPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVA 232 (269)
T ss_dssp HHHHHHHHHHHHHHHT--T-TEEEEEEEECSBC-CHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--C-CCEEEEEEECCCc-CcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999988753 2 4788899887764 3442110 0011111122222 3457889988888
Q ss_pred HHHhcc
Q psy612 292 QLLIQD 297 (1005)
Q Consensus 292 ~~l~~~ 297 (1005)
.++...
T Consensus 233 ~L~s~~ 238 (269)
T 3vtz_A 233 FLASDR 238 (269)
T ss_dssp HHHSGG
T ss_pred HHhCCc
Confidence 777543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-24 Score=228.52 Aligned_cols=221 Identities=17% Similarity=0.144 Sum_probs=157.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|++|+++|++++++.++.+..+++.+++++.+.++.++.+|++|+++++++++++.+.+|++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999976555554455667777888888899999999999999999999999999999
Q ss_pred cEEEEcCcccC--ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 147 DGVLHIAGISG--LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~--~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
|+||||||+.. ...++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||+++. +++..|+++
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~---~~~~~Y~as 161 (253)
T 3qiv_A 88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK---RGGGAIVNQSSTAAW---LYSNYYGLA 161 (253)
T ss_dssp CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTCEEEEEECC--------------CC
T ss_pred CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCCEEEEECCcccc---CCCchhHHH
Confidence 99999999842 1456788999999999999999999999999999754 246889999999876 567789999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++.+|.+|.+.. .|..... .......+...+ +..++++..+.+..++..
T Consensus 162 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 233 (253)
T 3qiv_A 162 KVGINGLTQQLSRELG--GRNIRINAIAPGPIDT-EANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSD 233 (253)
T ss_dssp HHHHHHHHHHHHHHTT--TTTEEEEEEEC--------------------------------CCHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEEecCCcc-cchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999999988743 4456889999887643 3322111 011111111111 234677888887777654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=232.92 Aligned_cols=220 Identities=14% Similarity=0.012 Sum_probs=173.2
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+| |||+++|+.|+++|+++++ +.|++...+..+++.+....+.+++||++|+++++++++++.+++|
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVAL-TYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE-EESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 589999999986 9999999999999997555 4555443333344333323468899999999999999999999999
Q ss_pred CccEEEEcCcccCcc----chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 145 PIDGVLHIAGISGLT----SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~----~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+||+||||||+.. . .++.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.++++.
T Consensus 108 ~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-----~~g~IV~isS~~~~~~~~~~~~ 181 (296)
T 3k31_A 108 SLDFVVHAVAFSD-KNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMT-----NGGSILTLSYYGAEKVVPHYNV 181 (296)
T ss_dssp CCSEEEECCCCCC-HHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-----TCEEEEEEECGGGTSCCTTTTH
T ss_pred CCCEEEECCCcCC-cccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCEEEEEEehhhccCCCCchh
Confidence 9999999999875 3 6788999999999999999999999999998753 2589999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh---hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..+++|..+.+..++..
T Consensus 182 Y~asKaal~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~ 258 (296)
T 3k31_A 182 MGVCKAALEASVKYLAVDLG--KQQIRVNAISAGPVR-TLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSD 258 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TTTEEEEEEEECCCC-CSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHh--hcCcEEEEEEECCCc-CchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999999999888753 445688999888764 4443322111 1111222222 346889999998887764
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=227.36 Aligned_cols=219 Identities=15% Similarity=0.200 Sum_probs=167.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++. ++. .+..+.++.++++|++|+++++++++.+.+ +|+|
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~i 80 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG---EDV---VADLGDRARFAAADVTDEAAVASALDLAET-MGTL 80 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC---HHH---HHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch---HHH---HHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCC
Confidence 579999999999999999999999999766665533 222 233477899999999999999999998877 9999
Q ss_pred cEEEEcCcccCccchh----ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh-----cCCCcEEEEecCcccccCCCC
Q psy612 147 DGVLHIAGISGLTSNI----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ-----KNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~----~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~-----~~~~~~iV~~SSia~~~g~~g 217 (1005)
|+||||||+.. ...+ .+.+.++|++++++|+.|+++++++++|+|++.. ....++||++||+++..+.++
T Consensus 81 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 159 (257)
T 3tl3_A 81 RIVVNCAGTGN-AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG 159 (257)
T ss_dssp EEEEECGGGSH-HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH
T ss_pred CEEEECCCCCC-CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC
Confidence 99999999875 3333 2489999999999999999999999999964310 145689999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH-HHHhcC--CCCCCHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSK--QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g--~~~l~~~~~~~~l~~~l 294 (1005)
+..|+++|+++..|++.++.+.. ..++++.+|.+|... +.|.......... ...... .+..+++|..+.+..++
T Consensus 160 ~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~ 236 (257)
T 3tl3_A 160 QAAYSASKGGVVGMTLPIARDLA--SHRIRVMTIAPGLFD-TPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHII 236 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEEecCcc-ChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh
Confidence 99999999999999999888754 345688899887664 4554332222111 122222 23568999999988887
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 237 s~ 238 (257)
T 3tl3_A 237 EN 238 (257)
T ss_dssp HC
T ss_pred cC
Confidence 64
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=229.65 Aligned_cols=222 Identities=17% Similarity=0.192 Sum_probs=176.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++++.|+++|+++++ ++|+ +..+++.++++..+.++.++.+|++|+++++++++++.+.+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEE-EESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEE-EcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999987666 5554 4445566677777788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||+++..+.+++..|+++|
T Consensus 122 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~asK 197 (285)
T 2c07_A 122 VDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN---NRYGRIINISSIVGLTGNVGQANYSSSK 197 (285)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH---HTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---CCCCEEEEECChhhccCCCCCchHHHHH
Confidence 999999999987 778889999999999999999999999999998753 2457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........ -...++++.++.+..++..
T Consensus 198 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 267 (285)
T 2c07_A 198 AGVIGFTKSLAKELA--SRNITVNAIAPGFIS-SDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 267 (285)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-C-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHH--HhCcEEEEEEeCcEe-cCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998887643 334588899988774 34432211111 11111111 1356889999888887754
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=225.42 Aligned_cols=216 Identities=13% Similarity=0.127 Sum_probs=170.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..+++ ..++.++.+|++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999987555544333333333333 3358889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++. ..++||++||+++..+.+++..|+++|+
T Consensus 83 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (260)
T 1nff_A 83 HVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA---GRGSIINISSIEGLAGTVACHGYTATKF 158 (260)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 99999999987 6788899999999999999999999999999997542 4688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|.... .|.. .... ... ... -+..++++..+.+..++..
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~-~~~~--~~~-~~~~~~~~~~~dvA~~v~~l~s~ 222 (260)
T 1nff_A 159 AVRGLTKSTALELG--PSGIRVNSIHPGLVKT-PMTD-WVPE--DIF-QTALGRAAEPVEVSNLVVYLASD 222 (260)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBCS-GGGT-TSCT--TCS-CCSSSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhC--ccCcEEEEEEeCCCCC-Cccc-cchh--hHH-hCccCCCCCHHHHHHHHHHHhCc
Confidence 99999999887643 3345888998876643 3322 1000 000 111 1346799999998887754
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=225.92 Aligned_cols=182 Identities=16% Similarity=0.181 Sum_probs=156.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+. +..+.++.+|++|++++++++ +++|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----HHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----HhcC
Confidence 5799999999999999999999999997666655545556667777655 467889999999999887765 4579
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.++...|+++
T Consensus 85 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~as 160 (267)
T 3t4x_A 85 KVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIE---RKEGRVIFIASEAAIMPSQEMAHYSAT 160 (267)
T ss_dssp CCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCCEEEEEcchhhccCCCcchHHHHH
Confidence 9999999999987 778999999999999999999999999999999753 356899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|+++++|++.++.+.. ..++++.+|.+|....
T Consensus 161 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t 192 (267)
T 3t4x_A 161 KTMQLSLSRSLAELTT--GTNVTVNTIMPGSTLT 192 (267)
T ss_dssp HHHHHHHHHHHHHHTT--TSEEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHHhC--CCCeEEEEEeCCeecC
Confidence 9999999999987743 4456888998887643
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=230.09 Aligned_cols=222 Identities=12% Similarity=0.012 Sum_probs=173.0
Q ss_pred cCCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
-++|++|||||+ +|||+++|+.|+++|++++ ++.|++...+..+++.+...++.+++||++|+++++++++++.+++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELA-FTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEE-EEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEE-EEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 368999999999 5599999999999998754 4556544444444554444568899999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|+||+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.+++..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-----~~g~Iv~isS~~~~~~~~~~~~ 182 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA-----DGGSILTLTYYGAEKVMPNYNV 182 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT-----TCEEEEEEECGGGTSBCTTTTH
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCEEEEEeehhhccCCCchHH
Confidence 999999999998752 35788999999999999999999999999999853 2689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++..|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..+++|..+.+..++..
T Consensus 183 Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 259 (293)
T 3grk_A 183 MGVAKAALEASVKYLAVDLG--PQNIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSD 259 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-C------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHh--HhCCEEEEEecCCCc-chhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999999999999988754 345688899888764 444332211 11111222222 356899999998887754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=227.59 Aligned_cols=222 Identities=14% Similarity=0.143 Sum_probs=173.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|++|+++|++++++.++.+..++.. +..+.++.++.+|++|.++++++++++.+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AAYPDRAEAISLDVTDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999987666555544444433 3346789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|++ ...++||++||+++..+.++++.|+++|+
T Consensus 81 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (281)
T 3m1a_A 81 DVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRE---RGSGSVVNISSFGGQLSFAGFSAYSATKA 156 (281)
T ss_dssp SEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence 99999999987 778889999999999999999999999999999754 24688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--------hhhh------HHH-HhcCCCCCCHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--------EQTD------FYF-KSSKQKVLHENDGLKLFE 291 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--------~~~~------~~~-~~~g~~~l~~~~~~~~l~ 291 (1005)
+++.|++.++.+.. ..++++.+|.+|.+.. .|..... .... ... ...+....++++.++.+.
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~ 233 (281)
T 3m1a_A 157 ALEQLSEGLADEVA--PFGIKVLIVEPGAFRT-NLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIR 233 (281)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-TTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh--ccCcEEEEEecCcccc-ccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHH
Confidence 99999999887743 2345888898876643 3311100 0000 000 112233567888888888
Q ss_pred HHHhccc
Q psy612 292 QLLIQDK 298 (1005)
Q Consensus 292 ~~l~~~~ 298 (1005)
.++..+.
T Consensus 234 ~~~~~~~ 240 (281)
T 3m1a_A 234 LALDTEK 240 (281)
T ss_dssp HHHHSSS
T ss_pred HHHhCCC
Confidence 8776654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=228.25 Aligned_cols=222 Identities=12% Similarity=0.076 Sum_probs=164.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH---HhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL---KKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l---~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++|||||+||||+++++.|+++|++++++.++.+..++..+++ ...+.++.++.+|++|+++++++++++.+++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999987555544434445555556 2335678999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccC----CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCC
Q psy612 144 GPIDGVLHIAGISGLTSNILEA----NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGDFGS 218 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~----t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~-~~g~~g~ 218 (1005)
|++|+||||||+.. ..++.+. +.++|++++++|+.|++++.++++|+|++. . ++||++||+++ ..+.++.
T Consensus 85 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~-g~iv~isS~~~~~~~~~~~ 159 (278)
T 1spx_A 85 GKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST---K-GEIVNISSIASGLHATPDF 159 (278)
T ss_dssp SCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCTTSSSSCCTTS
T ss_pred CCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---C-CeEEEEecccccccCCCCc
Confidence 99999999999876 6677777 999999999999999999999999997542 2 78999999999 8899999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc----chh------hhHHHHhcCC-CCCCHHHHH
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQ------TDFYFKSSKQ-KVLHENDGL 287 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~------~~~~~~~~g~-~~l~~~~~~ 287 (1005)
..|+++|++++.|++.++.+.. ..++++.+|.+|.+. +.|.... ... .........+ +..++++..
T Consensus 160 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 236 (278)
T 1spx_A 160 PYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSISPGLVA-TGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA 236 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-CCC--------------HHHHHHHHHHCTTSSCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-CccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHH
Confidence 9999999999999999887643 335688899988774 3342211 000 1111111111 356788888
Q ss_pred HHHHHHHhc
Q psy612 288 KLFEQLLIQ 296 (1005)
Q Consensus 288 ~~l~~~l~~ 296 (1005)
+.+..++..
T Consensus 237 ~~v~~l~s~ 245 (278)
T 1spx_A 237 EVIAFLADR 245 (278)
T ss_dssp HHHHHHHCH
T ss_pred HHHHHHcCc
Confidence 888777653
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=225.68 Aligned_cols=221 Identities=12% Similarity=0.103 Sum_probs=173.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHH---cCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~---~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
++|++|||||++|||+++|+.|++ +|++++++.++.+..+++.+++++. +.++.++.+|++|+++++++++++.+
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999999 8886555544434455566666654 67899999999999999999999988
Q ss_pred --hcCCcc--EEEEcCcccCc-cchhcc-CCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC--CCcEEEEecCccccc
Q psy612 142 --NIGPID--GVLHIAGISGL-TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKN--KLDFVCYFSSSSAIL 213 (1005)
Q Consensus 142 --~~g~id--gvIh~AG~~~~-~~~~~~-~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~--~~~~iV~~SSia~~~ 213 (1005)
.+|++| +||||||+... ..++.+ .+.++|++++++|+.|+++++++++|+| .+. ..++||++||+++..
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAF---QDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTS---CCCTTCEEEEEEECCGGGTS
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhccCCCceEEEEcCchhcC
Confidence 778999 99999998641 246777 7999999999999999999999999985 333 468999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----hh-hhHHHHhc-CCCCCCHHHH
Q psy612 214 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----EQ-TDFYFKSS-KQKVLHENDG 286 (1005)
Q Consensus 214 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~~-~~~~~~~~-g~~~l~~~~~ 286 (1005)
+.+++..|+++|+++++|++.++.+.. ++++.+|.+|.. ++.|..... .. ........ .-+..++++.
T Consensus 162 ~~~~~~~Y~asKaa~~~~~~~la~e~~----~i~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv 236 (259)
T 1oaa_A 162 PYKGWGLYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPL-DNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTS 236 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCT----TEEEEEEECCSB-SSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhhCC----CceEEEecCCCc-CcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHH
Confidence 999999999999999999999988742 278889988766 445532110 00 01111111 2245788999
Q ss_pred HHHHHHHHh
Q psy612 287 LKLFEQLLI 295 (1005)
Q Consensus 287 ~~~l~~~l~ 295 (1005)
.+.+..++.
T Consensus 237 A~~v~~l~~ 245 (259)
T 1oaa_A 237 AQKLLGLLQ 245 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 988888775
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=229.46 Aligned_cols=222 Identities=15% Similarity=0.101 Sum_probs=180.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..+++.++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 57999999999999999999999999875555544444556667777778889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 110 D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 185 (272)
T 1yb1_A 110 SILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK---NNHGHIVTVASAAGHVSVPFLLAYCSSKF 185 (272)
T ss_dssp SEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred cEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence 99999999887 677888899999999999999999999999999653 35689999999999988888999999999
Q ss_pred HHHHHHHHHHhcccc-ccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 227 FQTVYAKYLNNKNIY-KKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~-~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
+++.|++.++.+... +..++++.+|.+|.. ++.|... . . .. ....+++++.++.+..++..+...+
T Consensus 186 a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v-~t~~~~~--~--~---~~-~~~~~~~~dva~~i~~~~~~~~~~~ 252 (272)
T 1yb1_A 186 AAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKN--P--S---TS-LGPTLEPEEVVNRLMHGILTEQKMI 252 (272)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEETHH-HHCSTTC--T--H---HH-HCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCCcc-cCCcccc--c--c---cc-ccCCCCHHHHHHHHHHHHHcCCCEE
Confidence 999999988776321 123568889988754 4555321 0 0 11 1246899999999999988765543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=228.97 Aligned_cols=216 Identities=18% Similarity=0.205 Sum_probs=167.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++ .|+. ..++. .++.+.++.++.+|++|+++++++++++.+++|+
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAV-DREERLLAEA---VAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHH---HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH---HHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999865554 5543 22222 2333467899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++++++.|+| +. .++||++||+++. +.+++..|+++|
T Consensus 81 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~-~g~iv~isS~~~~-~~~~~~~Y~asK 153 (263)
T 2a4k_A 81 LHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL----EE-GGSLVLTGSVAGL-GAFGLAHYAAGK 153 (263)
T ss_dssp CCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC----CT-TCEEEEECCCTTC-CHHHHHHHHHCS
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hc-CCEEEEEecchhc-CCCCcHHHHHHH
Confidence 999999999987 6778899999999999999999999999999984 22 6899999999998 888899999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++..|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..++++..+.+..++..
T Consensus 154 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 223 (263)
T 2a4k_A 154 LGVVGLARTLALELA--RKGVRVNVLLPGLIQ-TPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSE 223 (263)
T ss_dssp SHHHHHHHHHHHHHT--TTTCEEEEEEECSBC-CGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEEeCcCc-CchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999887743 345688899887664 4443321111 1111122222 356899999999888764
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-23 Score=221.91 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=173.0
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+|++|||||+||||++++++|+++|++++++.++.+..++..+++ +..+.++.++.+|++|+++++++++++.+++|++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999999986555444333444455555 4446789999999999999999999999999999
Q ss_pred cEEEEcCcccCccch---hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 147 DGVLHIAGISGLTSN---ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~---~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|+||||||+.. ..+ +.+.+.++|++++++|+.|++++.+.++|.|++. +.++||++||.++..+.+++..|++
T Consensus 82 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~ 157 (250)
T 2cfc_A 82 DVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ---GAGVIVNIASVASLVAFPGRSAYTT 157 (250)
T ss_dssp CEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCEEEEECChhhccCCCCchhHHH
Confidence 99999999876 555 8889999999999999999999999999997542 4578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cc--hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~--~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++.+|.+|...+ .|... .. ...........+ ...++++..+.+..++..
T Consensus 158 sK~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T 2cfc_A 158 SKGAVLQLTKSVAVDYA--GSGIRCNAVCPGMIET-PMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGE 231 (250)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-TTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEEeCcCcc-CccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999887643 2345888998876643 33221 00 111111111111 245889998888887754
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=227.27 Aligned_cols=224 Identities=13% Similarity=0.007 Sum_probs=174.9
Q ss_pred cccCCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 64 YIKQGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 64 ~~~~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
...++|++|||||+ +|||+++|+.|+++|++++ ++.|++...+..+++.+...++.++.||++|+++++++++++.+
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELA-FTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEE-EEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEE-EEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 34578999999998 9999999999999998654 45555555555566655445688999999999999999999999
Q ss_pred hcCCccEEEEcCcccCcc----chhcc-CCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 142 NIGPIDGVLHIAGISGLT----SNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~----~~~~~-~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
++|+||+||||||+.. . ..+.+ .+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.+
T Consensus 89 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~ 162 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAP-REAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS-----DDASLLTLSYLGAERAIP 162 (271)
T ss_dssp HCSCEEEEEECCCCCC-GGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE-----EEEEEEEEECGGGTSBCT
T ss_pred HcCCCCEEEECCccCc-cccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc-----cCceEEEEeccccccCCC
Confidence 9999999999999876 3 45555 89999999999999999999999988752 257899999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHH
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQ 292 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~ 292 (1005)
+++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..
T Consensus 163 ~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~ 239 (271)
T 3ek2_A 163 NYNTMGLAKAALEASVRYLAVSLG--AKGVRVNAISAGPIK-TLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAF 239 (271)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCC------CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-chhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 999999999999999999988743 445688999888764 445432211 11111222222 35789999999988
Q ss_pred HHhcc
Q psy612 293 LLIQD 297 (1005)
Q Consensus 293 ~l~~~ 297 (1005)
++...
T Consensus 240 l~s~~ 244 (271)
T 3ek2_A 240 LLSDL 244 (271)
T ss_dssp HHSGG
T ss_pred HcCcc
Confidence 87643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-23 Score=224.65 Aligned_cols=233 Identities=12% Similarity=0.050 Sum_probs=179.6
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCC-cEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNN-KAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+|++|||||+ +|||+++|++|+++|+++++ +.|++...+..+++ ++.+. ++.+++||++|+++++++++++.++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIF-TYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE-EESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE-ecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 57999999999 66999999999999997554 45555444444444 44444 7899999999999999999999999
Q ss_pred cCCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 143 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+|+||+||||||+... ...+.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.++++
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~ 159 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT-----EGGSIVTLTYLGGELVMPNYN 159 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-----TCEEEEEEECGGGTSCCTTTH
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC-----CCceEEEEecccccccCCCcc
Confidence 9999999999998652 35678899999999999999999999999998753 357999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..++.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s 236 (266)
T 3oig_A 160 VMGVAKASLDASVKYLAADLG--KENIRVNSISAGPIR-TLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFS 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-ccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999988753 345688899887664 444332211 11112222222 35789999999988876
Q ss_pred ccc----hhhhhhchhh
Q psy612 296 QDK----IQYLVLSGEL 308 (1005)
Q Consensus 296 ~~~----~~~~v~~~~~ 308 (1005)
... .+.+.+++.+
T Consensus 237 ~~~~~~tG~~i~vdGG~ 253 (266)
T 3oig_A 237 DMSRGITGENLHVDSGF 253 (266)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred CchhcCcCCEEEECCCe
Confidence 432 2334445544
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=221.48 Aligned_cols=223 Identities=17% Similarity=0.233 Sum_probs=171.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..+++ +.++.++.+|++|+++++++++++.+++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRV 87 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999999999999999999997666665555555555444 6679999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhc------cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc---CCCcEEEEecCcccccCCCC
Q psy612 147 DGVLHIAGISGLTSNIL------EANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~------~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~---~~~~~iV~~SSia~~~g~~g 217 (1005)
|+||||||+.. ...+. +.+.++|++++++|+.|++++.+++.|+|++... ...++||++||+++..+.++
T Consensus 88 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 166 (265)
T 2o23_A 88 DVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG 166 (265)
T ss_dssp CEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred CEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC
Confidence 99999999876 44443 4789999999999999999999999998642100 04689999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC--CCCCCHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~~~~~~l~~~l 294 (1005)
+..|+++|+++..|++.++.+.. ..++++.+|.+|.. .+.|........ ........ ....++++..+.+..++
T Consensus 167 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 243 (265)
T 2o23_A 167 QAAYSASKGGIVGMTLPIARDLA--PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 243 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCB-CCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEEeccc-cCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHh
Confidence 99999999999999998887743 33468889988766 444432211111 11111111 23568999999988887
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 244 ~~ 245 (265)
T 2o23_A 244 EN 245 (265)
T ss_dssp HC
T ss_pred hc
Confidence 54
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=222.90 Aligned_cols=223 Identities=15% Similarity=0.186 Sum_probs=156.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++++.+|+ +..++..++++..+.++.++.+|++|+++++++++++.+.+|+
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999998766664655 3445666677777888999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++ .+.++||++||.++..+.+++..|+++|
T Consensus 84 ~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 84 IDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK---QKSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp CCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHH---HTCEEEEEECC---------CHHHHHHH
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 999999999876 677888899999999999999999999999999754 2457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........ ....++++..+.+..++..
T Consensus 160 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 229 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFA--AKGIYCNAVAPGIIK-TDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASD 229 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHH--HcCcEEEEEEEEEEe-ccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCc
Confidence 999999999877643 234588888877654 34422111111 11111111 2346788888888777653
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-23 Score=220.73 Aligned_cols=226 Identities=12% Similarity=0.112 Sum_probs=178.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC-CCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r-~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||++++++|+++|++++++.++ .+..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999876666555 45566677777777888999999999999999999999999999
Q ss_pred ccEEEEcCcc-cCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh--cCCCcEEEEecCccccc-CCCCChhh
Q psy612 146 IDGVLHIAGI-SGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFVCYFSSSSAIL-GDFGSCDY 221 (1005)
Q Consensus 146 idgvIh~AG~-~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~--~~~~~~iV~~SSia~~~-g~~g~~~Y 221 (1005)
+|+||||||+ .. ..++.+.+.++|++++++|+.|++++.++++|.|++.. ....++||++||+.+.. +.++...|
T Consensus 86 id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y 164 (258)
T 3afn_B 86 IDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY 164 (258)
T ss_dssp CSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred CCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence 9999999998 54 67788999999999999999999999999999986432 22337899999999988 88999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|++++.|++.++.+.. ..++++.+|.+|... +.|....... .....+...+ ....+++..+.+..++..
T Consensus 165 ~~sK~a~~~~~~~~~~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 238 (258)
T 3afn_B 165 GAAKAFLHNVHKNWVDFHT--KDGVRFNIVSPGTVD-TAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBS-SGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHhhc--ccCeEEEEEeCCCcc-cccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence 9999999999998877632 234588888887664 3343221111 1111111111 346788888888777653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=221.10 Aligned_cols=224 Identities=13% Similarity=0.150 Sum_probs=176.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999865555444344455667777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaaa 224 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.+++.|+|++ .+.++||++||+++..+.+++ ..|+++
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~~~Y~~s 168 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE---QKQGVIVAIGSMSGLIVNRPQQQAAYNAS 168 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCSSSCCHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh---cCCCEEEEEecchhcccCCCCCccccHHH
Confidence 999999998642456788999999999999999999999999998754 246889999999999888888 999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccc-cc--chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-GN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-~~--~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|++++.|++.++.+.. ..++++++|.+|.+.. .|.. .. ............+ ...++++..+.+..++..
T Consensus 169 K~a~~~~~~~l~~e~~--~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 241 (260)
T 3awd_A 169 KAGVHQYIRSLAAEWA--PHGIRANAVAPTYIET-TLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASD 241 (260)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-TTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEeeeecc-chhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 9999999998877633 2345888999887754 3322 10 0111111122222 356889998888887754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=224.75 Aligned_cols=220 Identities=14% Similarity=0.133 Sum_probs=169.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++ .|+. ..++.. +....++.++++|++|+++++++++++.+++|+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIA-DLDVMAAQAVV---AGLENGGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHH---HTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHH---HHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999865554 5543 222222 222336788999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ....++||++||+++..+.++...|+++|
T Consensus 87 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (263)
T 3ak4_A 87 FDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLA--SNTKGVIVNTASLAAKVGAPLLAHYSASK 163 (263)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCeEEEEecccccccCCCCchhHHHHH
Confidence 999999999876 678889999999999999999999999999999753 22258999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----------hh-hhHHHHhcCC-CCCCHHHHHHHHHH
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQ-TDFYFKSSKQ-KVLHENDGLKLFEQ 292 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~-~~~~~~~~g~-~~l~~~~~~~~l~~ 292 (1005)
++++.|++.++.+.. ..++++.+|.+|... +.|..... .. .........+ +..++++..+.+..
T Consensus 164 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~ 240 (263)
T 3ak4_A 164 FAVFGWTQALAREMA--PKNIRVNCVCPGFVK-TAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF 240 (263)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBT-THHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--HcCeEEEEEeccccc-ChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999887643 334588899887664 33321110 00 0111111111 35678888888887
Q ss_pred HHhc
Q psy612 293 LLIQ 296 (1005)
Q Consensus 293 ~l~~ 296 (1005)
++..
T Consensus 241 l~s~ 244 (263)
T 3ak4_A 241 LASD 244 (263)
T ss_dssp HHSG
T ss_pred HhCc
Confidence 7654
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=224.23 Aligned_cols=222 Identities=14% Similarity=0.046 Sum_probs=178.9
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-++|++|||||++|||+++|++|+++|++++++.+|+. ..++..++++..+.++.++.+|++|.++++++++.+.+.++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999998877766654 45666777888888999999999999999999999887764
Q ss_pred ------CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 145 ------PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 145 ------~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
+||+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|+| + +.++||++||.++..+.+++
T Consensus 85 ~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~--~~~~iv~isS~~~~~~~~~~ 158 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL---R--DNSRIINISSAATRISLPDF 158 (255)
T ss_dssp HHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE---E--EEEEEEEECCGGGTSCCTTB
T ss_pred ccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh---C--CCCEEEEeCChhhccCCCCc
Confidence 5999999999987 7889999999999999999999999999998874 2 35789999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh--hH-HHHhcC-CCCCCHHHHHHHHHHHH
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--DF-YFKSSK-QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~~-~~~~~g-~~~l~~~~~~~~l~~~l 294 (1005)
..|+++|++++.|++.++.+.. ..++++.+|.+|.. .+.|........ .. ...... .+..+++|..+.+..++
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 235 (255)
T 3icc_A 159 IAYSMTKGAINTMTFTLAKQLG--ARGITVNAILPGFV-KTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLA 235 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCB-CCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHH--hcCeEEEEEEEeee-cccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHh
Confidence 9999999999999999988753 33568888887766 455543321111 11 111122 23457889988888776
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 236 s~ 237 (255)
T 3icc_A 236 SP 237 (255)
T ss_dssp SG
T ss_pred Cc
Confidence 53
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=221.08 Aligned_cols=224 Identities=15% Similarity=0.118 Sum_probs=176.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++++.+++ +..+++.++++..+.++.++.+|++|++++.++++++.+++|+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998765555424 3345566677777788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ....++||++||+.+..+.++...|+++|
T Consensus 86 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (261)
T 1gee_A 86 LDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--CCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence 999999999886 677889999999999999999999999999999753 12257999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++++|.+|.+. +.|.... ............+ ...++++..+.+..++..
T Consensus 163 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (261)
T 1gee_A 163 GGMKLMTETLALEYA--PKGIRVNNIGPGAIN-TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234 (261)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeeCCcC-CchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999998877643 234688899887764 3343211 0101111111111 346889999988887753
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.6e-23 Score=224.08 Aligned_cols=221 Identities=11% Similarity=-0.011 Sum_probs=174.7
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||+ +|||+++|+.|+++|++++ ++.|+. ..+..+++.+...++.++.||++|+++++++++++.+++|
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-EeeCch-HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 57999999988 7899999999999998654 445544 4556667766656788999999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhcc-CCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 145 PIDGVLHIAGISGL---TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~-~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+||+||||||+... ...+.+ .+.++|++++++|+.|++++.++++|+|+ + ..++||++||+++..+.++++.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~---~-~~g~iv~isS~~~~~~~~~~~~ 178 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK---N-RNASMVALTYIGAEKAMPSYNT 178 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT---T-TTCEEEEEECGGGTSCCTTTHH
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh---c-CCCeEEEEeccccccCCCCchh
Confidence 99999999998752 144555 99999999999999999999999999863 2 2689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|...... .......... -+..++++..+.+..++..
T Consensus 179 Y~asKaal~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~ 255 (280)
T 3nrc_A 179 MGVAKASLEATVRYTALALG--EDGIKVNAVSAGPIK-TLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 255 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCCC-CSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSG
T ss_pred hHHHHHHHHHHHHHHHHHHH--HcCcEEEEEeecccc-chhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999888754 345688899888775 444332211 1111112222 2357889998888887654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=226.43 Aligned_cols=218 Identities=14% Similarity=0.107 Sum_probs=167.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++ .|+.. ...+..+..+.++.++.+|++|+++++++++++.+++|+|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~r~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVL-DKSAE--RLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI 80 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ESCHH--HHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE-eCCHH--HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999865555 45431 2222223456789999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhc----cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 147 DGVLHIAGISGLTSNIL----EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~----~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
|+||||||+......+. +.+.++|++++++|+.|++++.++++|+|++. .++||++||+++..+.+++..|+
T Consensus 81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~ 156 (281)
T 3zv4_A 81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS----RGSVVFTISNAGFYPNGGGPLYT 156 (281)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGTSSSSSCHHHH
T ss_pred CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCeEEEEecchhccCCCCCchhH
Confidence 99999999864222333 44577899999999999999999999998542 37899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----------hhhhHHHHhcCC-CCCCHHHHHHHH
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQTDFYFKSSKQ-KVLHENDGLKLF 290 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~~~~~~~~g~-~~l~~~~~~~~l 290 (1005)
++|+++.+|++.++.+.. .. +++.+|.+|... +.|..... ...........+ +..+++|....+
T Consensus 157 asKaa~~~l~~~la~e~~--~~-Irvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 232 (281)
T 3zv4_A 157 ATKHAVVGLVRQMAFELA--PH-VRVNGVAPGGMN-TDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAY 232 (281)
T ss_dssp HHHHHHHHHHHHHHHHHT--TT-SEEEEEEECSSC-C--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHhc--CC-CEEEEEECCcCc-CCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999988854 22 789999887664 44432110 011111222222 245788888888
Q ss_pred HHHHh
Q psy612 291 EQLLI 295 (1005)
Q Consensus 291 ~~~l~ 295 (1005)
..++.
T Consensus 233 ~fL~s 237 (281)
T 3zv4_A 233 VFFAT 237 (281)
T ss_dssp HHHHS
T ss_pred HHhhc
Confidence 87776
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=220.88 Aligned_cols=223 Identities=16% Similarity=0.192 Sum_probs=175.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|++++++.++.+..++..++++. .+.++.++.+|++|+++++++++++.+.+|+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999998655554443444455555554 4678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.++||++||.++..+.+++..|+++|
T Consensus 86 ~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 161 (248)
T 2pnf_A 86 IDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIK---QRWGRIVNISSVVGFTGNVGQVNYSTTK 161 (248)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHH---HTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence 999999999887 677889999999999999999999999999998754 2467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHH-HhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.+. +.|...........+ .... ....++++..+.+..++..
T Consensus 162 ~a~~~~~~~la~e~~--~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (248)
T 2pnf_A 162 AGLIGFTKSLAKELA--PRNVLVNAVAPGFIE-TDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSE 231 (248)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEeceec-CchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 999999998877643 234588888887664 334322111111111 1111 1346788888888877753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=232.92 Aligned_cols=185 Identities=17% Similarity=0.104 Sum_probs=157.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-C----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-K----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
++|++|||||+||||+++|+.|+++|+++++..++. . ..+++.+.++..+.++.++.+|++|+++++++++++.+
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999766655432 1 22334444555678899999999999999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-CCCChh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSCD 220 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-~~g~~~ 220 (1005)
++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+ .++.+.
T Consensus 84 ~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~---~~~g~iV~isS~~~~~~~~~~~~~ 159 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR---QKHGLLIWISSSSSAGGTPPYLAP 159 (324)
T ss_dssp HHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCCSSCHH
T ss_pred HcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEEecchhccCCCCcchh
Confidence 9999999999999987 788999999999999999999999999999999754 34688999999999865 477899
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+++|+++++|++.++.+.. ..++++.+|.+|.+.
T Consensus 160 Y~asKaa~~~~~~~la~el~--~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELS--RWGIETSIIVPGAFT 194 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TTTEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHhh--hhCcEEEEEECCccc
Confidence 99999999999999888743 345689999988764
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=224.88 Aligned_cols=224 Identities=13% Similarity=0.072 Sum_probs=169.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-------CcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-------NKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-------~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..++++..+ .++.++.+|++|+++++++++.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 47899999999999999999999999865555443333344444444444 56889999999999999999999
Q ss_pred HhhcCCc-cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 140 INNIGPI-DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 140 ~~~~g~i-dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
.+++|++ |+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ...++||++||+++..+.+++
T Consensus 86 ~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~ 162 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN--GCRGSIINISSIVGKVGNVGQ 162 (264)
T ss_dssp HHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCTHHHHCCTTB
T ss_pred HHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc--CCCceEEEECChhhccCCCCC
Confidence 9999999 99999999987 7788899999999999999999999999999987532 225789999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
..|+++|++++.|++.++.+.. ..++++.+|.+|... +.|....... ......... ....++++..+.+..++..
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (264)
T 2pd6_A 163 TNYAASKAGVIGLTQTAARELG--RHGIRCNSVLPGFIA-TPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASE 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred hhhHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeeccc-ccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCC
Confidence 9999999999999998877633 234588899888654 3332211110 011111111 1245789999888887754
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=230.00 Aligned_cols=219 Identities=16% Similarity=0.136 Sum_probs=170.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC------------CCchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR------------SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 134 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r------------~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~ 134 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++ ....++...+++..+.++.++.||++|++++++
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 58999999999999999999999999976666544 122334455666678899999999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 135 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 135 ~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
+++++.+++|+||+||||||+.. .. .+.+.++|++++++|+.|++++.++++|+| .+.++||++||+++..+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-----~~~g~iv~isS~~~~~~ 160 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYL-----TSGASIITTGSVAGLIA 160 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC-----CTTCEEEEECCHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh-----hcCcEEEEeccchhccc
Confidence 99999999999999999999876 44 347899999999999999999999999874 24578999999999877
Q ss_pred C-----------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc------------hhhhH
Q psy612 215 D-----------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------------EQTDF 271 (1005)
Q Consensus 215 ~-----------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------------~~~~~ 271 (1005)
. ++.+.|+++|++++.|++.++.+.. ..++++.+|.+|... +.|..... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T 3pxx_A 161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA--PQSIRANVIHPTNVN-TDMLNSAPMYRQFRPDLEAPSRADA 237 (287)
T ss_dssp HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEESSBS-STTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-cccccccchhhhhccccccchhHHH
Confidence 6 7788999999999999999988753 335688999988764 44432110 00000
Q ss_pred -----HHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 272 -----YFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 272 -----~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
......-+...++|..+.+..++..
T Consensus 238 ~~~~~~~~~~~~~~~~p~dva~~v~fL~s~ 267 (287)
T 3pxx_A 238 LLAFPAMQAMPTPYVEASDISNAVCFLASD 267 (287)
T ss_dssp HHHGGGGCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred HhhhhhhcccCCCCCCHHHHHhhHheecch
Confidence 0111123356788888888877653
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=222.79 Aligned_cols=228 Identities=12% Similarity=0.077 Sum_probs=175.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++++.|+++|++++++.++.+..+++.++++..+ .++.++.+|++|+++++++++++.+.+|
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 57999999999999999999999999875555444344455666676655 5788999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--cCCCCChhhh
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI--LGDFGSCDYA 222 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~--~g~~g~~~Ya 222 (1005)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.+++.|++. ..+.++||++||+++. .+.++...|+
T Consensus 111 ~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 1xg5_A 111 GVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVLPLSVTHFYS 188 (279)
T ss_dssp CCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcccCCCCCCchhH
Confidence 9999999999877 6778889999999999999999999999999997542 1113799999999988 6778889999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-c-hhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++|++++.|++.++.+......++++.+|.+|.+. +.|.... . ..............+++++.++.+..++..+
T Consensus 189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~ 264 (279)
T 1xg5_A 189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVE-TQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 264 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC-SSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc-chhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCC
Confidence 99999999999887763211345688899877664 3442110 0 0001111112234678999999998888754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=225.79 Aligned_cols=225 Identities=16% Similarity=0.062 Sum_probs=176.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||+++|++|+++|++++++.++.+..++..+++++. +.++.++.+|++|.++++++++.+.+.+|+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999987555544434445556666554 678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.|++ ....++||++||+++..+.++...|+++|
T Consensus 105 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 181 (302)
T 1w6u_A 105 PNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK--AQKGAAFLSITTIYAETGSGFVVPSASAK 181 (302)
T ss_dssp CSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hcCCCEEEEEcccccccCCCCcchhHHHH
Confidence 999999999876 677889999999999999999999999999998742 33468999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh---hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.+.+.+|........ ........+ ...++++.++.+..++..
T Consensus 182 ~a~~~~~~~la~~~~--~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~ 254 (302)
T 1w6u_A 182 AGVEAMSKSLAAEWG--KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSD 254 (302)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCC
Confidence 999999999877632 334588999998886655532211111 111121111 246889999998887754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-23 Score=227.65 Aligned_cols=211 Identities=18% Similarity=0.207 Sum_probs=170.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-CcEEEEEecCCCH-HHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDK-LKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~-~~v~~~~~~i~~~~ 143 (1005)
..+|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+ .++.++.+|++|+ ++++++++.+.+++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999865554444445566777777664 5799999999998 99999999999999
Q ss_pred CCccEEEEcCcccCc-----------------------------cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy612 144 GPIDGVLHIAGISGL-----------------------------TSNILEANYKNFYSVLSSKISGTIALNYALENTILK 194 (1005)
Q Consensus 144 g~idgvIh~AG~~~~-----------------------------~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~ 194 (1005)
|+||+||||||+... ...+.+.+.++|++++++|+.|++++.++++|+|
T Consensus 90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l-- 167 (311)
T 3o26_A 90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL-- 167 (311)
T ss_dssp SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH--
T ss_pred CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh--
Confidence 999999999998631 1245678999999999999999999999999985
Q ss_pred HhcCCCcEEEEecCcccccCC-------------------------------------------CCChhhhHHHHHHHHH
Q psy612 195 LQKNKLDFVCYFSSSSAILGD-------------------------------------------FGSCDYAMGNRFQTVY 231 (1005)
Q Consensus 195 ~~~~~~~~iV~~SSia~~~g~-------------------------------------------~g~~~Yaaana~l~~l 231 (1005)
.+.+.++||++||+++..+. ++...|+++|+++..|
T Consensus 168 -~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 168 -QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp -TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred -ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 34456899999999987764 4668999999999999
Q ss_pred HHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 232 AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 232 a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.++.+.. ++++.+|++|.. .+.|.. +...++++++.+.+..++..+
T Consensus 247 ~~~la~e~~----~i~v~~v~PG~v-~T~~~~-------------~~~~~~~~~~a~~~~~~~~~~ 294 (311)
T 3o26_A 247 TRVLANKIP----KFQVNCVCPGLV-KTEMNY-------------GIGNYTAEEGAEHVVRIALFP 294 (311)
T ss_dssp HHHHHHHCT----TSEEEEECCCSB-CSGGGT-------------TCCSBCHHHHHHHHHHHHTCC
T ss_pred HHHHHhhcC----CceEEEecCCce-ecCCcC-------------CCCCCCHHHHHHHHHHHHhCC
Confidence 999988742 368889987765 455532 123478889988887776544
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=221.21 Aligned_cols=211 Identities=12% Similarity=0.108 Sum_probs=169.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+. +.++.++.+|++|+++++++++++.+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999876555444332 4567889999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|+ +...++||++||+++..+.++...|+++|+
T Consensus 76 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (264)
T 2dtx_A 76 SVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMI---RSRDPSIVNISSVQASIITKNASAYVTSKH 151 (264)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHT---TSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH---HcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence 99999999887 77888999999999999999999999999999853 345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-------c-----hhhhHHHHhcC-CCCCCHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------N-----EQTDFYFKSSK-QKVLHENDGLKLFEQL 293 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~-----~~~~~~~~~~g-~~~l~~~~~~~~l~~~ 293 (1005)
+++.|++.++.+.. .. +++.+|.+|... +.|.... . ........... .+..++++.++.+..+
T Consensus 152 a~~~~~~~la~e~~--~~-i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 227 (264)
T 2dtx_A 152 AVIGLTKSIALDYA--PL-LRCNAVCPATID-TPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL 227 (264)
T ss_dssp HHHHHHHHHHHHHT--TT-SEEEEEEECSBC-SHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--CC-cEEEEEEeCCCc-CcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999987753 23 788899887663 4443211 0 00111111112 2356889999988887
Q ss_pred Hhc
Q psy612 294 LIQ 296 (1005)
Q Consensus 294 l~~ 296 (1005)
+..
T Consensus 228 ~s~ 230 (264)
T 2dtx_A 228 ASR 230 (264)
T ss_dssp HSG
T ss_pred hCc
Confidence 754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-23 Score=220.68 Aligned_cols=222 Identities=12% Similarity=0.168 Sum_probs=175.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEE-EEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIY-IQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~-~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+|++|||||+||||++++++|+++|++++++.+|+. ..++..++++..+.++.+ +.+|++|.++++++++++.+.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999987776646653 344555667666767777 999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. +.++||++||+++..+.+++..|+++|
T Consensus 81 ~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 156 (245)
T 2ph3_A 81 LDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA---RFGRIVNITSVVGILGNPGQANYVASK 156 (245)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc---CCCEEEEEeChhhccCCCCCcchHHHH
Confidence 999999999887 6788899999999999999999999999999997542 457899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++++|.+|.+. +.|....... ......... ....++++..+.+..++..
T Consensus 157 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 226 (245)
T 2ph3_A 157 AGLIGFTRAVAKEYA--QRGITVNAVAPGFIE-TEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSE 226 (245)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEEEEeec-CcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999998877643 234588889887664 3332211111 111111111 2346888888888877654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=219.33 Aligned_cols=224 Identities=17% Similarity=0.150 Sum_probs=173.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+...+..+++.+ .+.++.++.+|++|+++++++++++.+.+|+
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999998665555445544444555543 3678999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-------C
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-------S 218 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-------~ 218 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ...++||++||+++..+.++ +
T Consensus 93 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 169 (265)
T 1h5q_A 93 ISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK--QQKGSIVVTSSMSSQIINQSSLNGSLTQ 169 (265)
T ss_dssp EEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred CCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc--CCCceEEEeCCchhhccccccccccccc
Confidence 999999999987 6788899999999999999999999999999997532 23588999999998877653 7
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
..|+++|++++.|++.++.+.. ..++++++|.+|.+. +.|........ ........+ ...++++..+.+..++..
T Consensus 170 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 246 (265)
T 1h5q_A 170 VFYNSSKAACSNLVKGLAAEWA--SAGIRVNALSPGYVN-TDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSD 246 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred cccHHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-cccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccC
Confidence 8999999999999998887643 234588899887664 44432211111 111111122 246788888888877754
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=222.34 Aligned_cols=223 Identities=14% Similarity=0.161 Sum_probs=172.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|++|+++|++++++.++.+..+++.+++ +.++.+++||++|.++++++++.+ ++++++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~i 104 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRL 104 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTSSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHhCCC
Confidence 6899999999999999999999999997555443333334444433 678999999999999999999999 889999
Q ss_pred cEEEEc-CcccCccchh-----ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh---cCCCcEEEEecCcccccCCCC
Q psy612 147 DGVLHI-AGISGLTSNI-----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 147 dgvIh~-AG~~~~~~~~-----~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~---~~~~~~iV~~SSia~~~g~~g 217 (1005)
|+|||| ||+.. ...+ .+.+.++|++++++|+.|++++.+++.+.|.+.. ....++||++||+++..+.++
T Consensus 105 d~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 183 (281)
T 3ppi_A 105 RYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG 183 (281)
T ss_dssp EEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT
T ss_pred CeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC
Confidence 999999 66544 3333 4689999999999999999999999999975311 135689999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC--CCCCCHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~~~~~~l~~~l 294 (1005)
...|+++|+++..|++.++.+.. ..++++.+|.+|.. .+.|........ ........ .+..++++.++.+..++
T Consensus 184 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~ 260 (281)
T 3ppi_A 184 QTAYAAAKAGVIGLTIAAARDLS--SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCcC-CchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999888753 34568889988766 445543222211 11222222 23568999999999888
Q ss_pred hcc
Q psy612 295 IQD 297 (1005)
Q Consensus 295 ~~~ 297 (1005)
..+
T Consensus 261 s~~ 263 (281)
T 3ppi_A 261 TNG 263 (281)
T ss_dssp HCS
T ss_pred cCC
Confidence 643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-23 Score=220.53 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=154.2
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
...++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++ ..++.++.+|+++.+++.+++++ +
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~----~ 82 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK----T 82 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT----C
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh----c
Confidence 3457899999999999999999999999987555544333333333333 45788999999999998877754 4
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
+++|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||.++..+.++++.|++
T Consensus 83 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~ 158 (249)
T 3f9i_A 83 SNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ---KRYGRIINISSIVGIAGNPGQANYCA 158 (249)
T ss_dssp SCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCCCC--CCSCSHHHHH
T ss_pred CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEccHHhccCCCCCchhHH
Confidence 78999999999987 777888999999999999999999999999999754 34678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|++++.|++.++.+.. ..++++.+|.+|.+. +.|....... .........+ ....+++..+.+..++...
T Consensus 159 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 231 (249)
T 3f9i_A 159 SKAGLIGMTKSLSYEVA--TRGITVNAVAPGFIK-SDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN 231 (249)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHH--HcCcEEEEEecCccc-cCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence 99999999998887643 334688899887764 4443322221 1112222222 3456888888888877643
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=216.82 Aligned_cols=210 Identities=14% Similarity=0.075 Sum_probs=164.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||++++++|+++|++++++ .|+. ..++..+++ + ++.++.+|++|.++++++++.+.+.+|+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLM-ARDEKRLQALAAEL---E-GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHh---h-hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999865554 4543 222222222 2 5788999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|+ +.+.++||++||+++..+.++...|+++|
T Consensus 79 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 154 (234)
T 2ehd_A 79 LSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALL---RRGGGTIVNVGSLAGKNPFKGGAAYNASK 154 (234)
T ss_dssp CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH---TTTCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---hCCCcEEEEECCchhcCCCCCCchhhHHH
Confidence 999999999876 67888999999999999999999999999999864 34568999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++..|++.++.+.. ..++++.+|.+|.. .+.|..... .. +.++++++..+.+..++..+
T Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~~~---~~------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 155 FGLLGLAGAAMLDLR--EANVRVVNVLPGSV-DTGFAGNTP---GQ------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEECC--------------------------CCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEEeCCC-cCCcccccc---cc------cCCCCHHHHHHHHHHHhCCC
Confidence 999999998877643 33458889988765 444432211 00 12689999999999888754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=224.17 Aligned_cols=213 Identities=15% Similarity=0.203 Sum_probs=164.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..+ .+.++.+|++|+++++++++++.+++|++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETHGPV 88 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999987665554433221 26788999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. +.++||++||+++..+.+++..|+++|+
T Consensus 89 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 164 (253)
T 2nm0_A 89 EVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA---KKGRVVLISSVVGLLGSAGQANYAASKA 164 (253)
T ss_dssp SEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence 99999999987 6778889999999999999999999999999997542 4689999999999998889999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++..|++.++.+.. ..++++.+|.+|.+ ++.|....... ......... .+..++++..+.+..++..+
T Consensus 165 a~~~~~~~la~e~~--~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~ 234 (253)
T 2nm0_A 165 GLVGFARSLARELG--SRNITFNVVAPGFV-DTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDD 234 (253)
T ss_dssp HHHHHHHHHHHHHC--SSSEEEEEEEECSB-CC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEEeCcC-cCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999887743 34568888988765 44553221111 111111112 23578999999888877543
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-23 Score=221.77 Aligned_cols=188 Identities=11% Similarity=0.088 Sum_probs=155.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh-cCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-IGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-~g~ 145 (1005)
.+|++|||||+||||+++|+.|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++.+.++ +|+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999987555544434455566677666778999999999999999999999876 999
Q ss_pred ccEEEEcCc--cc-----CccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 146 IDGVLHIAG--IS-----GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 146 idgvIh~AG--~~-----~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
||+|||||| +. . ..++.+.+.++|++++++|+.|++++.+++.|+|+ +.+.++||++||+++..+. +.
T Consensus 84 id~lvnnAg~g~~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~g~iv~isS~~~~~~~-~~ 158 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTR-NKAFWETPASMWDDINNVGLRGHYFCSVYGARLMV---PAGQGLIVVISSPGSLQYM-FN 158 (260)
T ss_dssp CCEEEECCCTTHHHHHHTT-TCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHG---GGTCCEEEEECCGGGTSCC-SS
T ss_pred ceEEEECCccccccccccC-CCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHh---hcCCcEEEEEcChhhcCCC-CC
Confidence 999999995 33 2 45677889999999999999999999999999863 3346899999999987754 46
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
..|+++|++++.|++.++.+.. ..++++.+|.+|.. ++.|.
T Consensus 159 ~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v-~T~~~ 199 (260)
T 2qq5_A 159 VPYGVGKAACDKLAADCAHELR--RHGVSCVSLWPGIV-QTELL 199 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEECCCS-CTTTC
T ss_pred CchHHHHHHHHHHHHHHHHHhc--cCCeEEEEEecCcc-ccHHH
Confidence 8999999999999999887643 33568999998866 45553
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=223.86 Aligned_cols=223 Identities=9% Similarity=0.016 Sum_probs=176.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-.++++|||||+||||+++++.|+++|++++++.++.+..++..+++++.+. ++.++.+|++|.++++++++++.+.+|
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999998655554443445555666665554 789999999999999999999999999
Q ss_pred CccEEEEc-CcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 145 PIDGVLHI-AGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 145 ~idgvIh~-AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
++|+|||| ||+.. ..+.+.+.++|++++++|+.|++++.++++|.|++ ..++||++||+++..+.+++..|++
T Consensus 106 ~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y~a 179 (286)
T 1xu9_A 106 GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ----SNGSIVVVSSLAGKVAYPMVAAYSA 179 (286)
T ss_dssp SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred CCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH----CCCEEEEECCcccccCCCCccHHHH
Confidence 99999999 57654 34556789999999999999999999999998753 2478999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchhh
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~~ 301 (1005)
+|++++.|++.++.+......++++.+|.+|.+. +.|...... .......++++++++.+...+..+....
T Consensus 180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~------~~~~~~~~~~~~vA~~i~~~~~~~~~~~ 250 (286)
T 1xu9_A 180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID-TETAMKAVS------GIVHMQAAPKEECALEIIKGGALRQEEV 250 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC-CHHHHHHSC------GGGGGGCBCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC-ChhHHHhcc------ccccCCCCCHHHHHHHHHHHHhcCCceE
Confidence 9999999999888764223456788888877654 444321000 0112346899999999998887665443
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=224.01 Aligned_cols=222 Identities=13% Similarity=0.022 Sum_probs=172.4
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+ ||||+++|+.|+++|++++++ .|+...++..+++.+....+.++.+|++|+++++++++++.+++|
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFT-YATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999 999999999999999875554 455444555566654323477899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+|+ + ..++||++||+++..+.+++..|
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~-~~g~iv~isS~~~~~~~~~~~~Y 174 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLME---G-RNGAIVTLSYYGAEKVVPHYNVM 174 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGT---T-SCCEEEEEECGGGTSBCTTTTHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH---H-cCCEEEEEccchhccCCCCccHH
Confidence 99999999998752 15678899999999999999999999999999853 2 25899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|++++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..++..
T Consensus 175 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~ 250 (285)
T 2p91_A 175 GIAKAALESTVRYLAYDIA--KHGHRINAISAGPVK-TLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSD 250 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCcEEEEEEeCccc-CchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 9999999999999887743 345688999987664 344322111 11111122222 346899999988887753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=222.12 Aligned_cols=221 Identities=14% Similarity=0.049 Sum_probs=173.5
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+ ||||+++|+.|+++|++++++ .|+...++..+++.+....+.++.+|++|+++++++++++.+++|
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFT-YLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEE-ESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999 999999999999999875555 444435555566654323478899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+|+ + .++||++||+++..+.+++..|
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~--~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---N--GASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---E--EEEEEEEECGGGTSBCTTCHHH
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---c--CCEEEEEecchhcCCCCCchhh
Confidence 99999999998752 15688999999999999999999999999998752 2 4799999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++..|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..++..
T Consensus 159 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~ 234 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLG--KHHIRVNALSAGPIR-TLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 234 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeCccc-cchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999887743 345688999987664 444322111 11111122222 346899999999888754
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=222.28 Aligned_cols=222 Identities=15% Similarity=0.126 Sum_probs=174.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..+.++..+.++.++.+|++|+++++++++++.+.+|++
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999876666555555566666666667789999999999999999999999999999
Q ss_pred cEEEEcCcccCcc-chhc-cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--CCCChhhh
Q psy612 147 DGVLHIAGISGLT-SNIL-EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFGSCDYA 222 (1005)
Q Consensus 147 dgvIh~AG~~~~~-~~~~-~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--~~g~~~Ya 222 (1005)
|+||||||+.. . .++. +.+.++|++++++|+.|++++.+.+++.|++ .+.++||++||.++..+ .++...|+
T Consensus 113 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 3ctm_A 113 DVFVANAGVTW-TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK---NGKGSLIITSSISGKIVNIPQLQAPYN 188 (279)
T ss_dssp SEEEECGGGST-TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCCTTSCC---CCHHHHH
T ss_pred CEEEECCcccc-cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCeEEEECchHhccCCCCCCcccHH
Confidence 99999999876 4 5666 8889999999999999999999999999754 24689999999999888 78899999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++|++++.|++.++.+.. ..+ ++.+|.+|.. .+.|....... .........+ ...++++..+.+..++..
T Consensus 189 ~sK~a~~~~~~~la~e~~--~~~-~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 260 (279)
T 3ctm_A 189 TAKAACTHLAKSLAIEWA--PFA-RVNTISPGYI-DTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASN 260 (279)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTC-EEEEEEECSB-SSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhc--ccC-CEEEEeccCC-ccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCc
Confidence 999999999999988753 233 7778876655 44553211111 1111122222 356788888888887754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=218.53 Aligned_cols=224 Identities=16% Similarity=0.168 Sum_probs=171.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||++++++|+++|++++++.++.+..++..+++... .++.++.+|++|+++++++++.+.+.+|++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999987555443333334444444322 578999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKL-DFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~-~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|+ +.+. ++||++||.++..+.+++..|+++|
T Consensus 84 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (251)
T 1zk4_A 84 STLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMK---NKGLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp CEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT---TSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHH---hcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence 99999999876 67788999999999999999999999999999853 3344 7999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh-H-HHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-F-YFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~-~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+......++++.+|.+|... +.|......... . ......+ ...++++..+.+..++..
T Consensus 160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 232 (251)
T 1zk4_A 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASN 232 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC-CHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCc-chhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999877653211345688899877654 444322111100 0 0011111 245889999988887754
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=218.04 Aligned_cols=222 Identities=11% Similarity=0.083 Sum_probs=174.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+||||++++++|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.++++++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999865555444344455666777777889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++ +.+.++|++++++|+.|++++.++++|+|++ ...++||++||.++..+.++...|+++|+
T Consensus 90 d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (255)
T 1fmc_A 90 DILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEK---NGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_dssp CEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 99999999876 5555 7899999999999999999999999999754 24678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-ch-hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NE-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|..... |.... .. ..........+ ....+++..+.+..++..
T Consensus 165 a~~~~~~~~~~~~~--~~~i~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (255)
T 1fmc_A 165 AASHLVRNMAFDLG--EKNIRVNGIAPGAILTD-ALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp HHHHHHHHHHHHHH--TTTEEEEEEEECSBCSH-HHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEecccCcch-hhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCC
Confidence 99999998877632 33458888888766543 22111 11 11111221121 245788888888877754
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=224.67 Aligned_cols=180 Identities=19% Similarity=0.196 Sum_probs=152.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||+||||+++++.|+++|++++++ .|+. ..+++.+++ ..+.++.+|++|+++++++++++.+++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC-DKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999865554 5543 222222222 24788999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. .++||++||+++..+.+++..|+++|
T Consensus 83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asK 158 (270)
T 1yde_A 83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS----QGNVINISSLVGAIGQAQAVPYVATK 158 (270)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC----CCEEEEEcCccccCCCCCCcccHHHH
Confidence 99999999986534678899999999999999999999999999997542 47899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++++.|++.++.+.. ..++++.+|.+|.+.
T Consensus 159 aa~~~~~~~la~e~~--~~gi~vn~v~Pg~v~ 188 (270)
T 1yde_A 159 GAVTAMTKALALDES--PYGVRVNCISPGNIW 188 (270)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEEeCccc
Confidence 999999999887643 344688889887664
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-23 Score=222.42 Aligned_cols=222 Identities=11% Similarity=0.062 Sum_probs=155.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..++++..+.++.++.+|++|+++++++++++.+.+ ++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999865555443344555666777777789999999999999999999999999 89
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.++||++||+++..+.++...|+++|
T Consensus 93 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK 168 (266)
T 1xq1_A 93 LDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA---SGCGNIIFMSSIAGVVSASVGSIYSATK 168 (266)
T ss_dssp CSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HSSCEEEEEC----------CCHHHHHH
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEEccchhccCCCCCchHHHHH
Confidence 999999999876 677888999999999999999999999999999754 2467899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hh-hhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++++.|++.++.+.. ..++++++|.+|.+. +.|..... .. .........+ ...++++..+.+..++.
T Consensus 169 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (266)
T 1xq1_A 169 GALNQLARNLACEWA--SDGIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238 (266)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHh--HhCcEEEEEeeCCCc-cchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999999999887643 234588899877664 33322110 00 0001111111 23567777777776664
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=219.09 Aligned_cols=211 Identities=12% Similarity=0.066 Sum_probs=167.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|++++++.++.+.. ...++.++.+|++|+++++++++++.+++|++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS---------ADPDIHTVAGDISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC---------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---------ccCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence 579999999999999999999999999766655443321 12368899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--cCCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI--LGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~--~g~~g~~~Yaaa 224 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ...++||++||.++. .+..+...|+++
T Consensus 98 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~~~Y~~s 173 (260)
T 3un1_A 98 DSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK---QGSGHIVSITTSLVDQPMVGMPSALASLT 173 (260)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEEechhhccCCCCCccHHHHHH
Confidence 99999999987 788999999999999999999999999999999753 456899999998876 345667899999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
|+++..|++.++.+.. ..++++.+|.+|... +.|.... ..........+ +..+++|.++.+..+..
T Consensus 174 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~--~~~~~~~~~p~~r~~~~~dva~av~~L~~ 240 (260)
T 3un1_A 174 KGGLNAVTRSLAMEFS--RSGVRVNAVSPGVIK-TPMHPAE--THSTLAGLHPVGRMGEIRDVVDAVLYLEH 240 (260)
T ss_dssp HHHHHHHHHHHHHHTT--TTTEEEEEEEECCBC-CTTSCGG--GHHHHHTTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC--cCCeEEEEEeecCCC-CCCCCHH--HHHHHhccCCCCCCcCHHHHHHHHHHhcc
Confidence 9999999999988753 445688899887664 4443221 11111111122 34578999888887743
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=218.89 Aligned_cols=213 Identities=10% Similarity=0.074 Sum_probs=162.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++++.|+++|++++++. |+... +..+ +.++.+|++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~-r~~~~-------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD-QAFTQ-------EQYP--FATEVMDVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-SCCCS-------SCCS--SEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe-Cchhh-------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998765554 44321 1223 6788999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+.++...|+++|+
T Consensus 76 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 76 DALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ---RGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp CEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc---CCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 99999999877 6788899999999999999999999999999997542 4688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chh-hh-HHHH-------hcC-CCCCCHHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ-TD-FYFK-------SSK-QKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~-~~-~~~~-------~~g-~~~l~~~~~~~~l~~~l 294 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|.... ... .. .... ... .+..++++..+.+..++
T Consensus 152 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (250)
T 2fwm_X 152 ALKSLALSVGLELA--GSGVRCNVVSPGSTD-TDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228 (250)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--ccCCEEEEEECCccc-CccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence 99999999887743 334588889887664 3342211 000 00 1100 111 12467888888888776
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 229 s~ 230 (250)
T 2fwm_X 229 SD 230 (250)
T ss_dssp SG
T ss_pred Cc
Confidence 54
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-23 Score=220.09 Aligned_cols=212 Identities=15% Similarity=0.179 Sum_probs=158.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++++.|+++|++++++.++.+..++ +..+.+|++|+++++++++++.+++|++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999876655544332211 1138899999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 83 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (247)
T 1uzm_A 83 EVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR---NKFGRMIFIGSVSGLWGIGNQANYAASKA 158 (247)
T ss_dssp SEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence 99999999987 678889999999999999999999999999999753 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|........ ........ .+..++++..+.+..++..
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 227 (247)
T 1uzm_A 159 GVIGMARSIARELS--KANVTANVVAPGYID-TDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASE 227 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEEeCCCc-ccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999887743 334688889887664 44432111111 11111111 2356889999888887753
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=220.11 Aligned_cols=221 Identities=12% Similarity=0.040 Sum_probs=171.6
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+ ||||+++|+.|+++|++++++ .|+...++..+++.+....+.++.+|++|+++++++++++.+++|
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALS-YQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEE-ESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-cCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999 999999999999999875554 555444445555654323478899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.+++.|+| .+ .++||++||+++..+.+++..|
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y 160 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL---RE--GGGIVTLTYYASEKVVPKYNVM 160 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE---EE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHh---cc--CCEEEEEecccccCCCCCchHH
Confidence 99999999998651 1568889999999999999999999999998874 22 4799999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|++++.|++.++.+.. ..++++.+|.+|... +.|..... .......+...+ +..++++..+.+..++..
T Consensus 161 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~ 236 (261)
T 2wyu_A 161 AIAKAALEASVRYLAYELG--PKGVRVNAISAGPVR-TVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSP 236 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCCC-CTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHh--hhCcEEEEEeeCCCc-CchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 9999999999999887743 334688899887664 34432211 111111122222 346889999988887753
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=224.52 Aligned_cols=213 Identities=11% Similarity=0.077 Sum_probs=167.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|+++ +++.|+... . .....+.+|++|.+++.++++++.+++|+|
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V-~~~~r~~~~---------~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 95 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARV-AVADRAVAG---------I-AADLHLPGDLREAAYADGLPGAVAAGLGRL 95 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEE-EECSSCCTT---------S-CCSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEE-EEEeCCHHH---------H-HhhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999864 555554321 0 112345899999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.++++.|+++|+
T Consensus 96 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKa 171 (266)
T 3uxy_A 96 DIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA---AGGGAIVNVASCWGLRPGPGHALYCLTKA 171 (266)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCcEEEEECCHHhCCCCCCChHHHHHHH
Confidence 99999999987 788999999999999999999999999999999754 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--------hhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--------QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--------~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..+++|..+.+..++...
T Consensus 172 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 248 (266)
T 3uxy_A 172 ALASLTQCMGMDHA--PQGIRINAVCPNEVN-TPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA 248 (266)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEESSBC-CHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEeeCCCc-chHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999888753 335688899887664 333211100 00111111122 2457888888888776543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-23 Score=218.15 Aligned_cols=211 Identities=12% Similarity=0.066 Sum_probs=163.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||++|||+++|+.|+++|++++++.++.+..++. .+..+.++.++.+|++|.++++++++++.+. .|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~ 75 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV---TNCLSNNVGYRARDLASHQEVEQLFEQLDSI---PST 75 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---HHTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCE
Confidence 6799999999999999999999999755554433333322 2334677889999999999999999887654 399
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +. .++||++||.++..+.++.+.|+++|+++
T Consensus 76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~-~~~iv~isS~~~~~~~~~~~~Y~asKaa~ 150 (230)
T 3guy_A 76 VVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK---DQ-PVNVVMIMSTAAQQPKAQESTYCAVKWAV 150 (230)
T ss_dssp EEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHT---TS-CCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred EEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC-CCeEEEEeecccCCCCCCCchhHHHHHHH
Confidence 999999987 78899999999999999999999999999999863 22 34899999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
..|++.++.+.. ..++++.+|.+|... +.|........ .....+++++..+.+..++..+..
T Consensus 151 ~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~------~~~~~~~~~dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 151 KGLIESVRLELK--GKPMKIIAVYPGGMA-TEFWETSGKSL------DTSSFMSAEDAALMIHGALANIGN 212 (230)
T ss_dssp HHHHHHHHHHTT--TSSCEEEEEEECCC-----------------------CCCHHHHHHHHHHHCCEETT
T ss_pred HHHHHHHHHHHH--hcCeEEEEEECCccc-ChHHHhcCCCC------CcccCCCHHHHHHHHHHHHhCcCC
Confidence 999999988854 445788899887664 44432211110 112467899999999888875543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=219.53 Aligned_cols=221 Identities=10% Similarity=0.002 Sum_probs=171.3
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+ ||||+++|+.|+++|++++++. |+...++..+++.+......++++|++|+++++++++++.+++|
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY-QNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE-SSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEc-CcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999999 9999999999999998755554 44444555566654323347899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhcc-CCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 145 PIDGVLHIAGISGL---TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~-~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
++|+||||||+... ..++.+ .+.++|++++++|+.|++++.++++|+| .+ .++||++||+++..+.+++..
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~ 161 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML---NP--GSALLTLSYLGAERAIPNYNV 161 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EE--EEEEEEEECGGGTSBCTTTTH
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHh---cc--CCEEEEEcchhhccCCCCchH
Confidence 99999999998652 156778 9999999999999999999999998874 22 478999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch---hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|++++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..++..
T Consensus 162 Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~ 238 (265)
T 1qsg_A 162 MGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIR-TLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD 238 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHHhh--hcCeEEEEEEeCCCc-cchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999887743 345688899887664 444322111 11111112222 346899999988887753
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.5e-23 Score=247.90 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=171.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|+++++. .+. ..++..+++++.+.++..+.+|++ ++.+++++++.++||+|
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~-~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~i 396 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFK-DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTI 396 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSS-CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCc-cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999976654 443 245667778777888888889984 45677889999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ +..++||++||+++..+.+++++|+++|+
T Consensus 397 DiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~---~~~G~IVnisS~ag~~~~~~~~~Y~asKa 472 (604)
T 2et6_A 397 DILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE---KQFGRIINITSTSGIYGNFGQANYSSSKA 472 (604)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCEEEEECChhhccCCCCChhHHHHHH
Confidence 99999999987 788999999999999999999999999999999753 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+| + .+.|...... ......++|++....+..++..
T Consensus 473 al~~lt~~la~El~--~~gIrVn~v~PG-~-~T~m~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~ 531 (604)
T 2et6_A 473 GILGLSKTMAIEGA--KNNIKVNIVAPH-A-ETAMTLSIMR-------EQDKNLYHADQVAPLLVYLGTD 531 (604)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEEC-C-CCCC----------------CCSSCGGGTHHHHHHTTST
T ss_pred HHHHHHHHHHHHhC--ccCeEEEEEcCC-C-CCccccccCc-------hhhccCCCHHHHHHHHHHHhCC
Confidence 99999999998864 456788999988 4 5666432110 0112356888888888776543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-23 Score=229.63 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=153.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh------CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK------FNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~------~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
++|++|||||++|||+++|++|+++|++++++.++....++..+.++. .+.++.++.+|++|+++++++++++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~- 79 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV- 79 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence 368999999999999999999999999866665543333222222221 2467999999999999999999988
Q ss_pred hhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
.+|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ ...++||++||+++..+.++...
T Consensus 80 -~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~~~g~IV~isS~~~~~~~~~~~~ 154 (327)
T 1jtv_A 80 -TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR---RGSGRVLVTGSVGGLMGLPFNDV 154 (327)
T ss_dssp -TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEEEEGGGTSCCTTCHH
T ss_pred -hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEECCcccccCCCCChH
Confidence 3589999999999876 678889999999999999999999999999999754 24689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
|+++|++++.|++.++.+.. ..++++++|.+|... +.|.
T Consensus 155 Y~aSK~a~~~~~~~la~el~--~~gI~v~~v~PG~v~-T~~~ 193 (327)
T 1jtv_A 155 YCASKFALEGLCESLAVLLL--PFGVHLSLIECGPVH-TAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-C---
T ss_pred HHHHHHHHHHHHHHHHHHhh--hcCcEEEEEEeCccc-ChHH
Confidence 99999999999999887643 345688999988764 4553
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=214.90 Aligned_cols=219 Identities=11% Similarity=0.121 Sum_probs=169.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcE-EEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA-IYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v-~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||++++++|+++|++++++.++.+..++..+++ +.++ .++.+|++|+++++++++++.+ +++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-VAP 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-HSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-hCC
Confidence 5789999999999999999999999987555544333333333333 4567 8899999999999999999988 999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAM 223 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaa 223 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. +.++||++||.++..+.+++ ..|++
T Consensus 86 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~~Y~~ 161 (254)
T 2wsb_A 86 VSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR---GAGAIVNLGSMSGTIVNRPQFASSYMA 161 (254)
T ss_dssp CCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCSSSCBHHHHH
T ss_pred CcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEecchhccCCCCCcchHHHH
Confidence 999999999887 6778889999999999999999999999999997542 46889999999999988888 99999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++++|.+|... +.|..... ........... ....++++..+.+..++..
T Consensus 162 sK~a~~~~~~~~~~~~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 235 (254)
T 2wsb_A 162 SKGAVHQLTRALAAEWA--GRGVRVNALAPGYVA-TEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASP 235 (254)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-SHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHh--hcCeEEEEEEecccC-chhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999998877643 234588899887664 33322110 11111112112 1356889999888887754
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=218.77 Aligned_cols=217 Identities=12% Similarity=0.016 Sum_probs=166.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||++|||+++|+.|+++|++++++.++.+..++..+ ++..+.++.++ |+++++++++++.+++|++|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence 689999999999999999999999865554443344444444 66556665544 667788899999999999999
Q ss_pred EEEcCccc-CccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 149 VLHIAGIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 149 vIh~AG~~-~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
||||||+. . ..++.+.+.++|++++++|+.|+++++++++|+|++. +.++||++||+++..+.+++..|+++|++
T Consensus 76 lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 151 (254)
T 1zmt_A 76 LVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR---KSGHIIFITSATPFGPWKELSTYTSARAG 151 (254)
T ss_dssp EEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCSTTTSCCTTCHHHHHHHHH
T ss_pred EEECCCcCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECCcccccCCCCchHHHHHHHH
Confidence 99999987 5 6788999999999999999999999999999997542 45899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCccc--------CcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhcc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWN--------NSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~--------~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~ 297 (1005)
++.|++.++.+.. ..++++.+|.+|... ++.|................+ +..++++..+.+..++...
T Consensus 152 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 228 (254)
T 1zmt_A 152 ACTLANALSKELG--EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS 228 (254)
T ss_dssp HHHHHHHHHHHHG--GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhh--hcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999887743 334688888887662 333432211111111122222 3568999999888877643
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=217.40 Aligned_cols=184 Identities=17% Similarity=0.133 Sum_probs=158.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+||||++++++|+++|++++++.+++ +..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998766665534 3345566677777888999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++++.| .+ .++||++||.++. .+.+++..|+++
T Consensus 100 ~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~--~~~iv~~sS~~~~~~~~~~~~~Y~~s 173 (274)
T 1ja9_A 100 LDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC---RR--GGRIILTSSIAAVMTGIPNHALYAGS 173 (274)
T ss_dssp EEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHE---EE--EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred CCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hh--CCEEEEEcChHhccCCCCCCchHHHH
Confidence 999999999887 6778899999999999999999999999999874 22 2799999999998 788999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|++++.|++.++.+.. ..++++.+|.+|.+..
T Consensus 174 K~a~~~~~~~~~~e~~--~~gi~v~~v~Pg~v~t 205 (274)
T 1ja9_A 174 KAAVEGFCRAFAVDCG--AKGVTVNCIAPGGVKT 205 (274)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBSS
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEeeCcccc
Confidence 9999999998877643 2345888898876643
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-22 Score=214.15 Aligned_cols=213 Identities=13% Similarity=0.128 Sum_probs=166.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||+||||+++++.|+++|++++++ .|+... ..+++ + +.++.+|++| ++++++++++.+.+|++|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~-~r~~~~--~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id 72 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIA-SRNPEE--AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH 72 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCHH--HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCHHH--HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999865554 554322 33333 3 6788999999 999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--CCChhhhHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCDYAMGN 225 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--~g~~~Yaaan 225 (1005)
+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+. ++...|+++|
T Consensus 73 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~~Y~~sK 148 (239)
T 2ekp_A 73 VLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA---GWGRVLFIGSVTTFTAGGPVPIPAYTTAK 148 (239)
T ss_dssp EEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECchhhccCCCCCCCccHHHHH
Confidence 9999999877 6788899999999999999999999999999997542 46899999999999888 8999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..++++..+.+..++..
T Consensus 149 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 220 (239)
T 2ekp_A 149 TALLGLTRALAKEWA--RLGIRVNLLCPGYVE-TEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGD 220 (239)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEEeCCcc-CchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999887743 334588889887664 4443211 0111111111112 346889998888877653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=245.77 Aligned_cols=212 Identities=19% Similarity=0.215 Sum_probs=171.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC---------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~---------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
.+|++|||||++|||+++|+.|+++|+++++...+. +..+++.+++++.|.++. +|++|.++++++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v~ 83 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIVE 83 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHHH
Confidence 579999999999999999999999999876654322 344566777777776543 68888888899999
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
++.++||+||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++. ..++||++||+++..+.++
T Consensus 84 ~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~---~~G~IVnisS~ag~~~~~~ 159 (604)
T 2et6_A 84 TAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ---KYGRIVNTSSPAGLYGNFG 159 (604)
T ss_dssp HHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTT
T ss_pred HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECCHHHcCCCCC
Confidence 99999999999999999987 7889999999999999999999999999999998642 4589999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++|+++.+|++.++.+.. ..++++.+|.++. .+.|...... ... ...++|++....+..++..
T Consensus 160 ~~~Y~asKaal~~lt~~la~El~--~~gIrVn~v~Pg~--~T~m~~~~~~--~~~-----~~~~~pe~vA~~v~~L~s~ 227 (604)
T 2et6_A 160 QANYASAKSALLGFAETLAKEGA--KYNIKANAIAPLA--RSRMTESIMP--PPM-----LEKLGPEKVAPLVLYLSSA 227 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECC--CCHHHHTTSC--HHH-----HTTCSHHHHHHHHHHHTSS
T ss_pred chHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEccCC--cCccccccCC--hhh-----hccCCHHHHHHHHHHHhCC
Confidence 99999999999999999998865 4567888888863 4445321100 111 1236899998888877654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9e-22 Score=215.69 Aligned_cols=222 Identities=14% Similarity=0.165 Sum_probs=171.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+|++|||||+||||++++++|+++|++++++ .|+. ..++..+++.. ..++.++.+|++|+++++++++++.+++|+
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIA-DIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-cCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999865555 5543 33334444422 237899999999999999999999999999
Q ss_pred ccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhhH
Q psy612 146 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAM 223 (1005)
Q Consensus 146 idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Yaa 223 (1005)
+|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|.|+ +.+.++||++||.++..+.+ +...|++
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~~iv~isS~~~~~~~~~~~~~Y~~ 169 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI---PAKKGSIVFTASISSFTAGEGVSHVYTA 169 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG---GGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---hcCCCeEEEEeeccccCCCCCCCcchHH
Confidence 9999999998641 25678899999999999999999999999999863 33568999999999998888 8899999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---h-hhhHHHHhc---CCCCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---E-QTDFYFKSS---KQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~-~~~~~~~~~---g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++++|.+|.+.. .|..... . ......... .....++++..+.+..++..
T Consensus 170 sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 246 (278)
T 2bgk_A 170 TKHAVLGLTTSLCTELG--EYGIRVNCVSPYIVAS-PLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGD 246 (278)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEESCCSC-CCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHh--hcCcEEEEEEeceecc-hhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCc
Confidence 99999999999887632 2345888998877644 3322111 1 111111111 12357899999998888754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=225.71 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=170.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEe--------cCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILS--------GRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~--------~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
.+|++|||||++|||+++|+.|+++|++++++. +|+ +..++..++++..+..+ .+|+++.++++++++
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKLVK 84 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHHHH
Confidence 579999999999999999999999999766652 233 33455666777666543 489999999999999
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
++.+++|+||+||||||+.. ..++.+.+.++|+.++++|+.|+++++++++|+|++. +.++||++||+++..+.++
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~grIV~vsS~~~~~~~~~ 160 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ---NYGRIIMTASASGIYGNFG 160 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTT
T ss_pred HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECChhhccCCCC
Confidence 99999999999999999987 6778899999999999999999999999999997642 4589999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+..|+++|+++..|++.++.+.. ..++++.+|.+|.+ +.|...... .... ..++++++...+..++..
T Consensus 161 ~~~Y~aSK~a~~~~~~~la~el~--~~gI~vn~v~PG~~--t~~~~~~~~--~~~~-----~~~~p~dvA~~~~~l~s~ 228 (319)
T 1gz6_A 161 QANYSAAKLGLLGLANTLVIEGR--KNNIHCNTIAPNAG--SRMTETVMP--EDLV-----EALKPEYVAPLVLWLCHE 228 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEEECC--STTTGGGSC--HHHH-----HHSCGGGTHHHHHHHTST
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc--ccCEEEEEEeCCCc--cccccccCC--hhhh-----ccCCHHHHHHHHHHHhCc
Confidence 99999999999999999988753 34568889988765 334321100 0111 136788888887776653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=214.00 Aligned_cols=216 Identities=15% Similarity=0.085 Sum_probs=172.1
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCC--cEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga--~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
..+++++|||||+||||+++|++|+++|+ ..|+++.|+ +..+. .+++...+.++.++.+|++|.++++++++++.+
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 34678999999999999999999999993 345555555 33333 345555567899999999999999999999999
Q ss_pred hcC--CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc----C----CCcEEEEecCccc
Q psy612 142 NIG--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK----N----KLDFVCYFSSSSA 211 (1005)
Q Consensus 142 ~~g--~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~----~----~~~~iV~~SSia~ 211 (1005)
.+| ++|+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++... . ..++||++||+++
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 999 89999999998653467888999999999999999999999999999865310 1 1578999999999
Q ss_pred ccCCC---CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHH
Q psy612 212 ILGDF---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 288 (1005)
Q Consensus 212 ~~g~~---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~ 288 (1005)
..+.+ ++..|+++|++++.|++.++.+.. ..++++++|.+|.. .+.|... ..+++++++++
T Consensus 177 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~-------------~~~~~~~~~a~ 240 (267)
T 1sny_A 177 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLY--PQRIMCVSLHPGWV-KTDMGGS-------------SAPLDVPTSTG 240 (267)
T ss_dssp CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCSB-CSTTTCT-------------TCSBCHHHHHH
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHhh--cCCcEEEEeCCcce-ecCCCCC-------------CCCCCHHHHHH
Confidence 88764 788999999999999998887643 23458889987765 4555321 23688999999
Q ss_pred HHHHHHhcc
Q psy612 289 LFEQLLIQD 297 (1005)
Q Consensus 289 ~l~~~l~~~ 297 (1005)
.+..++...
T Consensus 241 ~~~~~~~~~ 249 (267)
T 1sny_A 241 QIVQTISKL 249 (267)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 998888654
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=217.95 Aligned_cols=223 Identities=14% Similarity=0.080 Sum_probs=174.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-----~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++|||||+||||+++|+.|+++|++++++.++.+..++..++++. .+.++.++.+|++|+++++++++.+.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 579999999999999999999999998755554443445556666665 467899999999999999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.+.+. ..++||++||.+ ..+.+++..|
T Consensus 97 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~~~iv~isS~~-~~~~~~~~~Y 171 (303)
T 1yxm_A 97 TFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE---HGGSIVNIIVPT-KAGFPLAVHS 171 (303)
T ss_dssp HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH---HCEEEEEECCCC-TTCCTTCHHH
T ss_pred HcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh---cCCeEEEEEeec-ccCCCcchhh
Confidence 9999999999999876 6778899999999999999999999999999964321 257899999998 8888999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcc-ccccc---chhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK-FKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G-m~~~~---~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++.+|++.++.+.. ..++++++|.+|...+.+ |.... ............ ....++++..+.+..++..
T Consensus 172 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~ 249 (303)
T 1yxm_A 172 GAARAGVYNLTKSLALEWA--CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 249 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence 9999999999999888743 234688899887765432 22111 001111111111 1356889999999888754
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-22 Score=214.92 Aligned_cols=215 Identities=12% Similarity=0.093 Sum_probs=164.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCH-HHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDK-LKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~-~~v~~~~~~i~~~~ 143 (1005)
++|++|||||+||||+++|+.|+++|+++|+++.|+... +..+++.+. +.++.++.+|++|+ ++++++++++.+++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 478999999999999999999999999856666665432 333444433 56789999999998 99999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|++|+||||||+. +.++|++++++|+.|++++.++++|+|++....+.++||++||+++..+.+++..|++
T Consensus 83 g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 153 (254)
T 1sby_A 83 KTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSA 153 (254)
T ss_dssp SCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHH
T ss_pred CCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHH
Confidence 9999999999974 2356899999999999999999999874322223588999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc------hhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
+|++++.|++.++.+.. ..++++.+|.+|... +.|..... ....... ......++++.++.+..++..
T Consensus 154 sK~a~~~~~~~la~~~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dvA~~i~~~~~~ 227 (254)
T 1sby_A 154 SKAAVVSFTNSLAKLAP--ITGVTAYSINPGITR-TPLVHTFNSWLDVEPRVAELL--LSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHH--HHSEEEEEEEECSEE-SHHHHSCCCGGGSCTTHHHHH--TTSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--cCCeEEEEEecCCcc-CccccccchhhhhhHHHHHHH--hcCCCCCHHHHHHHHHHHHHc
Confidence 99999999998876521 234588899877654 44432110 1111111 122334789999988887753
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=222.62 Aligned_cols=187 Identities=10% Similarity=-0.098 Sum_probs=154.6
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHH-cCCcEEEEecCCCch------------HHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRSKLN------------SIIYKKLKKFNNKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~-~Ga~~vil~~r~~~~------------~~~~~~l~~~g~~v~~~~~Dvtd~~~v 132 (1005)
..+|++|||||++|||+++|+.|++ +|++++++..+.+.. +...+.+++.|.++..+.+|++|++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 5689999999999999999999999 999877665544332 123445677788899999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCcccC------------ccchh---------------------ccCCHHHHHHHHhhhhh
Q psy612 133 ISEINSIINNIGPIDGVLHIAGISG------------LTSNI---------------------LEANYKNFYSVLSSKIS 179 (1005)
Q Consensus 133 ~~~~~~i~~~~g~idgvIh~AG~~~------------~~~~~---------------------~~~t~~~~~~~l~~kv~ 179 (1005)
+++++++.++||+||+||||||+.. ...++ .+.+.++|++++++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 9999999999999999999999741 02333 77899999999999999
Q ss_pred HHH-HHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhHHHHHHHHHHHHHHhccccccC-CceEEEEeCCc
Q psy612 180 GTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKY-TNKLITINWPL 255 (1005)
Q Consensus 180 g~~-~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~-~~~~~si~wg~ 255 (1005)
+.| .+++++.+.+ +.. ..+.||++||+++..+.+++ +.|+++|++|.+|++.++.+.. .. ++++.+|.+|.
T Consensus 205 ~~~~~~~~~~~~~~--m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela--~~~GIRVNaVaPG~ 279 (405)
T 3zu3_A 205 EDWQMWIDALLDAG--VLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA--AHGGGDARVSVLKA 279 (405)
T ss_dssp HHHHHHHHHHHHHT--CEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH--TTTSCEEEEEECCC
T ss_pred hHHHHHHHHHHHHh--hhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC--cccCeEEEEEEeCC
Confidence 998 7777765431 222 35899999999999999987 9999999999999999998854 45 67999999887
Q ss_pred cc
Q psy612 256 WN 257 (1005)
Q Consensus 256 w~ 257 (1005)
..
T Consensus 280 i~ 281 (405)
T 3zu3_A 280 VV 281 (405)
T ss_dssp CC
T ss_pred Cc
Confidence 64
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=215.47 Aligned_cols=214 Identities=13% Similarity=0.129 Sum_probs=161.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||+||||+++++.|+++|++++++ .|+.. . .+++.+. .++.++.+|++|+++++ ++.++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~--~-~~~~~~~-~~~~~~~~D~~~~~~~~----~~~~~~~~i 75 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIAT-DINES--K-LQELEKY-PGIQTRVLDVTKKKQID----QFANEVERL 75 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESCHH--H-HGGGGGS-TTEEEEECCTTCHHHHH----HHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-ECCHH--H-HHHHHhc-cCceEEEeeCCCHHHHH----HHHHHhCCC
Confidence 47899999999999999999999999865554 55431 1 1122222 26889999999999887 444567999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-g~~~Yaaan 225 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+.+ +...|+++|
T Consensus 76 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~~Y~~sK 151 (246)
T 2ag5_A 76 DVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA---QKSGNIINMSSVASSVKGVVNRCVYSTTK 151 (246)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred CEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCceEEEEechHhCcCCCCCCccHHHHH
Confidence 99999999987 678889999999999999999999999999999754 2467999999999998888 999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-c------chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-N------NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~------~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.... .|... . ............. +..++++..+.+..++..
T Consensus 152 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~ 227 (246)
T 2ag5_A 152 AAVIGLTKSVAADFI--QQGIRCNCVCPGTVDT-PSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASD 227 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEESCEEC-HHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEeeCcCcC-cchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999999887643 3345888998876643 33211 0 0001111111111 345788888888877653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=213.22 Aligned_cols=211 Identities=17% Similarity=0.187 Sum_probs=164.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|++++..+|++..|+... ....+.++++|++|+++++++++.+. ++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------SAENLKFIKADLTKQQDITNVLDIIK--NVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------CCTTEEEEECCTTCHHHHHHHHHHTT--TCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------ccccceEEecCcCCHHHHHHHHHHHH--hCCC
Confidence 478999999999999999999999545566666665421 12357899999999999999996553 7899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+| .+ .++||++||.++..+.+++..|+++|+
T Consensus 72 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~--~g~iv~~sS~~~~~~~~~~~~Y~asKa 145 (244)
T 4e4y_A 72 DGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL---KV--GASIVFNGSDQCFIAKPNSFAYTLSKG 145 (244)
T ss_dssp EEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE---EE--EEEEEEECCGGGTCCCTTBHHHHHHHH
T ss_pred CEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh---cc--CcEEEEECCHHHccCCCCCchhHHHHH
Confidence 99999999987 7889999999999999999999999999998874 22 278999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch------------hhhHHHHhcCC-CCCCHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFYFKSSKQ-KVLHENDGLKLFEQL 293 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~~~~~g~-~~l~~~~~~~~l~~~ 293 (1005)
++..|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..+
T Consensus 146 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 146 AIAQMTKSLALDLA--KYQIRVNTVCPGTVD-TDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL 222 (244)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEESCBC-CHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HcCeEEEEEecCccC-chhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999987743 345688999988764 444321110 00111111111 246789999888887
Q ss_pred Hhcc
Q psy612 294 LIQD 297 (1005)
Q Consensus 294 l~~~ 297 (1005)
+...
T Consensus 223 ~s~~ 226 (244)
T 4e4y_A 223 LSDK 226 (244)
T ss_dssp HSGG
T ss_pred hcCc
Confidence 7543
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=209.75 Aligned_cols=212 Identities=13% Similarity=0.116 Sum_probs=163.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCC-chHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSK-LNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~-~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+++++|||||+||||++++++|+++|. .+|+++.|+. ..++ +.+ .+.++.++.+|++|+++++++++++.+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH----HHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999993 3455555553 3332 222 26689999999999999999999999999
Q ss_pred C--CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc-C--C-----CcEEEEecCccccc
Q psy612 144 G--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK-N--K-----LDFVCYFSSSSAIL 213 (1005)
Q Consensus 144 g--~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~-~--~-----~~~iV~~SSia~~~ 213 (1005)
| ++|+||||||+..+..++.+.+.++|++++++|+.|++++.++++|+|++... . + .++||++||..+..
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 8 99999999998653467788899999999999999999999999999764310 0 2 57899999999988
Q ss_pred CC-------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHH
Q psy612 214 GD-------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDG 286 (1005)
Q Consensus 214 g~-------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~ 286 (1005)
+. ++...|+++|++++.|++.++.+.. ..++++.+|.+|.. .+.|... ...++++++
T Consensus 158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~-------------~~~~~~~~~ 221 (250)
T 1yo6_A 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVLVVNFCPGWV-QTNLGGK-------------NAALTVEQS 221 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECCCC---------------------------HHH
T ss_pred CCcccccccCCccHHHHHHHHHHHHHHHHHHHhc--cCCeEEEEEcCCce-ecCCCCC-------------CCCCCHHHH
Confidence 86 6889999999999999999887743 33468889988765 4444321 135789999
Q ss_pred HHHHHHHHhccc
Q psy612 287 LKLFEQLLIQDK 298 (1005)
Q Consensus 287 ~~~l~~~l~~~~ 298 (1005)
.+.+..++..+.
T Consensus 222 a~~~~~~~~~~~ 233 (250)
T 1yo6_A 222 TAELISSFNKLD 233 (250)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhccc
Confidence 999998887543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=226.12 Aligned_cols=191 Identities=13% Similarity=-0.082 Sum_probs=154.6
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHH-cCCcEEEEecCCCchH------------HHHHHHHhCCCcEEEEEecCCCHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRSKLNS------------IIYKKLKKFNNKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~-~Ga~~vil~~r~~~~~------------~~~~~l~~~g~~v~~~~~Dvtd~~~v 132 (1005)
+.+|++|||||++|||+++|+.|++ +|++++++.++.+..+ .+.+.+++.|.++..+.+|++|++++
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 4689999999999999999999999 9998776655543322 23466777888999999999999999
Q ss_pred HHHHHHHHhhc-CCccEEEEcCccc------------Cccchh---------------------ccCCHHHHHHHHhhhh
Q psy612 133 ISEINSIINNI-GPIDGVLHIAGIS------------GLTSNI---------------------LEANYKNFYSVLSSKI 178 (1005)
Q Consensus 133 ~~~~~~i~~~~-g~idgvIh~AG~~------------~~~~~~---------------------~~~t~~~~~~~l~~kv 178 (1005)
+++++.+.++| |+||+||||||+. ....++ .+++.++|++++++|.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 99999999999 9999999999972 002233 3689999999999999
Q ss_pred hHHH-HHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCc
Q psy612 179 SGTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 255 (1005)
Q Consensus 179 ~g~~-~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 255 (1005)
.+.| .+++.+.+.+ +. ...+.||++||+++..+.+++ +.|+++|++|.+|++.++.+.. ..++++.+|.+|.
T Consensus 219 ~~~~~~~~~a~~~~~--m~-~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela--~~GIRVNaVaPG~ 293 (422)
T 3s8m_A 219 GQDWELWIDALEGAG--VL-ADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA--KHGGGANVAVLKS 293 (422)
T ss_dssp SHHHHHHHHHHHHTT--CE-EEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECC
T ss_pred hhHHHHHHHHHHHHH--Hh-hCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC--ccCEEEEEEEcCC
Confidence 9987 7777765431 11 235899999999999988866 9999999999999999998855 4567889999887
Q ss_pred ccCcccc
Q psy612 256 WNNSKFK 262 (1005)
Q Consensus 256 w~~~Gm~ 262 (1005)
.. +.|.
T Consensus 294 i~-T~~~ 299 (422)
T 3s8m_A 294 VV-TQAS 299 (422)
T ss_dssp CC-CTTG
T ss_pred Cc-Chhh
Confidence 74 4443
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=211.99 Aligned_cols=208 Identities=12% Similarity=0.066 Sum_probs=164.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--C
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI--G 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~--g 144 (1005)
++|++|||||+||||+++++.|+++|++++++.++.+... ..+.++.+|++|+++++++++++.+.+ |
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 71 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS 71 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999999986555544433211 246778999999999999999999999 7
Q ss_pred CccEEEEcCcccCccchh-ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 145 PIDGVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~-~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
++|+||||||+.. ..++ .+.+.++|++++++|+.|++++.++++|+| .+ .++||++||+++..+.++...|++
T Consensus 72 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y~~ 145 (236)
T 1ooe_A 72 QVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL---KP--GGLLQLTGAAAAMGPTPSMIGYGM 145 (236)
T ss_dssp CEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---EE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred CCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh---cc--CCEEEEECchhhccCCCCcHHHHH
Confidence 9999999999876 5666 788899999999999999999999999985 22 478999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+|++++.|++.++.+......++++.+|.+|.. .+.|........ .-...+++++..+.+..+|.++
T Consensus 146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~------~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNA------DHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB-CCHHHHHHSTTC------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcc-cCcchhhcCCCc------cccccCCHHHHHHHHHHHHcCC
Confidence 999999999999877421134578899988754 444432110000 0012468899999988777554
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=214.57 Aligned_cols=213 Identities=10% Similarity=-0.081 Sum_probs=163.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEec--CCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSG--RSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~--r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+|++|||||++|||+++|+.|+++|++++++.. |+. ..++..+++ .+ +|+.|+++++++++++.+++|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence 479999999999999999999999986555424 553 233333333 12 234477888999999999999
Q ss_pred CccEEEEcCcccCcc---chhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGLT---SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~---~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
++|+||||||+.. . .++.+.+.++|++++++|+.|+++++++++|+|++ .+.++||++||+++..+.+++..|
T Consensus 72 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y 147 (244)
T 1zmo_A 72 AIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRA---AGGASVIFITSSVGKKPLAYNPLY 147 (244)
T ss_dssp CEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCGGGTSCCTTCTTH
T ss_pred CCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEECChhhCCCCCCchHH
Confidence 9999999999876 6 78889999999999999999999999999999753 346899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc---ccc--chhhhHHHH-hcCC-CCCCHHHHHHHHHHHH
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK---IGN--NEQTDFYFK-SSKQ-KVLHENDGLKLFEQLL 294 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~---~~~--~~~~~~~~~-~~g~-~~l~~~~~~~~l~~~l 294 (1005)
+++|+++..|++.++.+.. ..++++.+|.+|.. ++.|. ... ......... ...+ +..++++..+.+..++
T Consensus 148 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~ 224 (244)
T 1zmo_A 148 GPARAATVALVESAAKTLS--RDGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLA 224 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSB-CBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh--hcCcEEEEEeeCCC-cCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence 9999999999999887743 33568889988765 45554 211 011111111 2222 3568999999988877
Q ss_pred hc
Q psy612 295 IQ 296 (1005)
Q Consensus 295 ~~ 296 (1005)
..
T Consensus 225 s~ 226 (244)
T 1zmo_A 225 SR 226 (244)
T ss_dssp TT
T ss_pred Cc
Confidence 64
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.3e-22 Score=212.56 Aligned_cols=208 Identities=12% Similarity=0.063 Sum_probs=164.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 143 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-- 143 (1005)
.++|++|||||+||||+++++.|+++|++++++.++.+... ..+.++.+|++|+++++++++++.+++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999987555544433211 246778999999999999999999999
Q ss_pred CCccEEEEcCcccCccchh-ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 144 GPIDGVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~-~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
|++|+||||||+.. ..++ .+.+.++|++++++|+.|++++.++++|+| ++ .++||++||+++..+.+++..|+
T Consensus 75 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y~ 148 (241)
T 1dhr_A 75 QKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL---KE--GGLLTLAGAKAALDGTPGMIGYG 148 (241)
T ss_dssp CCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---EE--EEEEEEECCGGGGSCCTTBHHHH
T ss_pred CCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhh---cc--CCEEEEECCHHHccCCCCchHHH
Confidence 79999999999876 6667 788899999999999999999999999985 22 47899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++|++++.|++.++.+......++++.+|.+|.. ++.|........ .-...+++++..+.+..++..
T Consensus 149 asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~~------~~~~~~~~~~vA~~v~~l~~~ 215 (241)
T 1dhr_A 149 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPEA------DFSSWTPLEFLVETFHDWITG 215 (241)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE-ECHHHHHHSTTS------CGGGSEEHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc-cCccccccCcch------hhccCCCHHHHHHHHHHHhcC
Confidence 9999999999999877431134578889988755 444432110000 001246788998888877754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=209.48 Aligned_cols=207 Identities=13% Similarity=0.044 Sum_probs=163.6
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+.+|++|||||++|||+++|+.|+++|++++++.++.+... ...+.+|++|.++++++++++.+++|+
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 34789999999999999999999999987555544433211 135789999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+......+.+.+.++|++++++|+.|++++.++++|+| ++ .++||++||+++..+.++...|+++|
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL---NQ--GGLFVLTGASAALNRTSGMIAYGATK 162 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---EE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh---cc--CCEEEEEechhhccCCCCCchhHHHH
Confidence 99999999987623337788899999999999999999999999985 22 47899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+......++++.+|.+|... +.|....... .......++++.++.+..++..
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~-t~~~~~~~~~------~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLD-TPTNRKYMSD------ANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBC-CHHHHHHCTT------SCGGGSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCc-Ccchhhhccc------ccccccCCHHHHHHHHHHHhcC
Confidence 99999999998873212456788899887653 4442211000 0112357899999999998876
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=211.65 Aligned_cols=218 Identities=12% Similarity=0.129 Sum_probs=166.4
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+|++||||| ++|||+++|+.|+++|++++++ .|+.. +..+++ ++.+.++.++.+|++|+++++++++++.+++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~-~r~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT-GFDRL--RLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 82 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE-ECSCH--HHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE-ecChH--HHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence 5799999999 9999999999999999875554 45432 111222 2335678899999999999999999999999
Q ss_pred C---CccEEEEcCcccCc----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 144 G---PIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 144 g---~idgvIh~AG~~~~----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
| ++|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+| .+ .++||++||..+ .+.+
T Consensus 83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~iss~~~-~~~~ 156 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM---NP--GGSIVGMDFDPS-RAMP 156 (269)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EE--EEEEEEEECCCS-SCCT
T ss_pred CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhh---cc--CCeEEEEcCccc-cccC
Confidence 9 99999999998641 2567889999999999999999999999999875 22 378999999876 6788
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-----chh--------hhHHHHhcCC--CCC
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQ--------TDFYFKSSKQ--KVL 281 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~--------~~~~~~~~g~--~~l 281 (1005)
++..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.... ... .........+ +..
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~ 233 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAG--KYGVRSNLVAAGPIR-TLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 233 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEecCccc-chhhhccccccchhhHHHHHHHHHHhhhccCCcccCCC
Confidence 999999999999999999888743 345688999887664 4442210 010 0111122233 246
Q ss_pred CHHHHHHHHHHHHhc
Q psy612 282 HENDGLKLFEQLLIQ 296 (1005)
Q Consensus 282 ~~~~~~~~l~~~l~~ 296 (1005)
+++|..+.+..++..
T Consensus 234 ~p~dvA~~v~~L~s~ 248 (269)
T 2h7i_A 234 DATPVAKTVCALLSD 248 (269)
T ss_dssp CCHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHhCc
Confidence 788888888877653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-22 Score=240.06 Aligned_cols=212 Identities=16% Similarity=0.175 Sum_probs=160.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEec---------CCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSG---------RSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~---------r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
.+|++|||||++|||+++|+.|+++|++++++.+ +.+..++..++++..+..+ .+|++|.++++++++
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIE 94 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHH
Confidence 6899999999999999999999999997766644 2344566777787777654 379999999999999
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
++.+++|+||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|+ +.+.++||++||+++..+.++
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~---~~~~g~IV~isS~a~~~~~~~ 170 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMK---KQNYGRIIMTSSNSGIYGNFG 170 (613)
T ss_dssp ----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCCEEEEECCHHHcCCCCC
Confidence 99999999999999999987 78899999999999999999999999999999964 345689999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
++.|+++|+++.+|++.++.+.. ..++++.+|.+|.. +.|....... . . ...+++++....+..++..
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~--~~gI~vn~v~Pg~~--t~~~~~~~~~--~-~----~~~~~pedvA~~v~~L~s~ 238 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGA--RNNVLCNVIVPTAA--SRMTEGILPD--I-L----FNELKPKLIAPVVAYLCHE 238 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEEC--------CCCCCH--H-H----HTTCCGGGTHHHHHHTTST
T ss_pred ChHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEECCCC--Chhhhhccch--h-h----hhcCCHHHHHHHHHHhcCC
Confidence 99999999999999999988864 44568888888753 2343221111 1 1 1235788888888776654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=211.58 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=146.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+|++|||||+||||+++++.|+++|++++++.++.+..++..+++.+. +.++.++.+|++|+++++++++.+.+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999987555544333344445555442 45789999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. .++|++++++|+.|++.+++.++|+|++....+.++||++||+++..+.++...|+++
T Consensus 86 ~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 156 (267)
T 2gdz_A 86 RLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS 156 (267)
T ss_dssp CCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHH
Confidence 9999999999753 2468999999999999999999999753222236899999999999999999999999
Q ss_pred HHHHHHHHHHH--HhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYL--NNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~--~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|++++.|++.+ +.+. ...++++.+|.+|...
T Consensus 157 K~a~~~~~~~~ala~e~--~~~gi~v~~v~Pg~v~ 189 (267)
T 2gdz_A 157 KHGIVGFTRSAALAANL--MNSGVRLNAICPGFVN 189 (267)
T ss_dssp HHHHHHHHHHHHHHHHH--HTCCEEEEEEEESCBS
T ss_pred HHHHHHHHHHHHHHHHh--ccCCcEEEEEecCcCc
Confidence 99999999974 2321 1345588899887663
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.8e-21 Score=204.62 Aligned_cols=215 Identities=12% Similarity=0.087 Sum_probs=162.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||+++++.|+++|+++++ +.|+. ..+++.++ .. .+.++.+|++|+++++++++ .+|+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~----~~~~ 76 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVA-VSRTQADLDSLVRE---CP-GIEPVCVDLGDWEATERALG----SVGP 76 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHH---ST-TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHH---cC-CCCEEEEeCCCHHHHHHHHH----HcCC
Confidence 5789999999999999999999999986554 45543 22222222 21 34567999999999888775 6789
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.|++. ...++||++||.++..+.++...|+++|
T Consensus 77 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 3d3w_A 77 VDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR--GVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCcEEEEeCchhhccCCCCCchHHHHH
Confidence 999999999877 6778899999999999999999999999999997542 2257899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc---cchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
++++.|++.++.+.. ..++++.+|.+|.... .|... ............. ....++++..+.+..++..
T Consensus 154 ~a~~~~~~~la~e~~--~~~i~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 225 (244)
T 3d3w_A 154 GALDMLTKVMALELG--PHKIRVNAVNPTVVMT-SMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBTT-TTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEeccccc-cchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998877632 2345888998876643 33211 0111111122111 2356899999998888764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.9e-22 Score=212.76 Aligned_cols=216 Identities=13% Similarity=0.111 Sum_probs=143.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|++ |+. |++++|+.. ..+++.+ ...+.++.+|+++.+. .+.+.+..+++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~-v~~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHI-VYALGRNPE---HLAALAE-IEGVEPIESDIVKEVL-EEGGVDKLKNLDHV 76 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSE-EEEEESCHH---HHHHHHT-STTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCe-EEEEeCCHH---HHHHHHh-hcCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence 478999999999999999999987 765 555556532 2223333 2458899999999877 55555566788999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|++. .++||++||.++..+.++++.|+++|+
T Consensus 77 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asK~ 151 (245)
T 3e9n_A 77 DTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA----SGCVIYINSGAGNGPHPGNTIYAASKH 151 (245)
T ss_dssp SEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEC----------CHHHHHHHH
T ss_pred CEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----CCeEEEEcCcccccCCCCchHHHHHHH
Confidence 99999999987 7788899999999999999999999999999997542 278999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
+++.|++.++.+.. ..++++.+|.+|.+. +.|.......... .......+++++.++.+..++..+..
T Consensus 152 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~--~~~~~~~~~p~dvA~~i~~l~~~~~~ 219 (245)
T 3e9n_A 152 ALRGLADAFRKEEA--NNGIRVSTVSPGPTN-TPMLQGLMDSQGT--NFRPEIYIEPKEIANAIRFVIDAGET 219 (245)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECCC-------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCCcc-Cchhhhhhhhhhc--ccccccCCCHHHHHHHHHHHHcCCCc
Confidence 99999999888743 334688899887664 3443221111100 11122357899999999998876643
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-22 Score=224.97 Aligned_cols=189 Identities=13% Similarity=0.041 Sum_probs=150.1
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCC--chHH-------HHHHHHhCC---CcEEEEEecCCCH--H
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSK--LNSI-------IYKKLKKFN---NKAIYIQVDVSDK--L 130 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~--~~~~-------~~~~l~~~g---~~v~~~~~Dvtd~--~ 130 (1005)
.+|++||||+++ |||+++|+.|+++|+++++...+.. .... ..+.+...+ ..+.++.||+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 368999999875 9999999999999997665543321 0000 011111112 3478899999988 7
Q ss_pred ------------------HHHHHHHHHHhhcCCccEEEEcCcccC-ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy612 131 ------------------KMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALENT 191 (1005)
Q Consensus 131 ------------------~v~~~~~~i~~~~g~idgvIh~AG~~~-~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~ 191 (1005)
+++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|+
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999742 2577899999999999999999999999999998
Q ss_pred HHHHhcCCCcEEEEecCcccccCCCCCh-hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 192 ILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 192 l~~~~~~~~~~iV~~SSia~~~g~~g~~-~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
|+ +. ++||++||+++..+.+++. .|+++|+++.+|++.++.+... ..++++.+|.+|.. .+.|.
T Consensus 161 m~---~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~-~~gI~vn~v~PG~v-~T~~~ 225 (329)
T 3lt0_A 161 MK---PQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGR-NYNIRINTISAGPL-KSRAA 225 (329)
T ss_dssp EE---EE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCC-CCHHH
T ss_pred Hh---hC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCC-ccCeEEEEEeccee-echhH
Confidence 53 22 8999999999999999996 9999999999999998877532 03568889988766 45553
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.7e-21 Score=203.30 Aligned_cols=216 Identities=15% Similarity=0.063 Sum_probs=162.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|+++|+++++ +.|+. ..++..+ .. ..+.++.+|++|+++++++++ .+++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~----~~~~ 76 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVA-VTRTNSDLVSLAK---EC-PGIEPVCVDLGDWDATEKALG----GIGP 76 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHH---HS-TTCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHH---hc-cCCCcEEecCCCHHHHHHHHH----HcCC
Confidence 5789999999999999999999999986554 45543 2222222 22 234567999999999888776 6789
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ...++||++||.++..+.++...|+++|
T Consensus 77 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 1cyd_A 77 VDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR--GVPGSIVNVSSMVAHVTFPNLITYSSTK 153 (244)
T ss_dssp CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC--CCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence 999999999887 6788899999999999999999999999999987542 2257899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcC-CCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++++.|++.++.+.. ..++++.+|.+|...+ .|.... ........+... .....+++..+.+..++..+
T Consensus 154 ~a~~~~~~~~a~~~~--~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 154 GAMTMLTKAMAMELG--PHKIRVNSVNPTVVLT-DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBTT-HHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecCcccC-ccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence 999999998877632 2345888888876643 332110 111111122222 23568899999888877543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=204.83 Aligned_cols=212 Identities=17% Similarity=0.203 Sum_probs=161.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||+||||++++++|+++|++++++.++.+ . .++.++.+|++|+++++++++++ ++++++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence 589999999999999999999999987655544433 1 13478999999999999999999 8899999
Q ss_pred EEEEcCcccCccchhccCC----HHHHHHHHhhhhhHHHHHHHHHHHHHHHHh---cCCCcEEEEecCcccccCCCCChh
Q psy612 148 GVLHIAGISGLTSNILEAN----YKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t----~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~---~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
+||||||+.. ...+.+.+ .++|++++++|+.|++++.+++.+.|++.. ....++||++||+++..+.++...
T Consensus 69 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 69 AVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred EEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 9999999876 55555544 459999999999999999999999864311 112349999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcC--CCCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|++++.|++.++.+.. ..++++++|.+|.+. +.|........ ........ ....++++..+.+..++..
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 223 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELA--GWGIRVVTVAPGLFD-TPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSCS-SHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHh--hcCcEEEEEEeccCc-chhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence 99999999999998877643 234588899887664 33432221111 11111111 1345889999998888765
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=216.26 Aligned_cols=213 Identities=15% Similarity=0.098 Sum_probs=156.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++ +.|+.. ...+..+..+.++.++.+|++|.++++++++++ +++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~-~~r~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~i 87 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIM-AVRDTR--KGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGA 87 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEE-EESCHH--HHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EECCHH--HHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCC
Confidence 6899999999999999999999999986554 455432 122223344678999999999999999888766 799
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 215 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~----------- 215 (1005)
|+||||||+.. +..+.+.++|++++++|+.|++++.++++|+| . .+||++||+++..+.
T Consensus 88 D~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~---~----~riv~isS~~~~~~~~~~~~~~~~~~ 157 (291)
T 3rd5_A 88 DVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRL---T----DRVVTVSSMAHWPGRINLEDLNWRSR 157 (291)
T ss_dssp EEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE---E----EEEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred CEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---H----hheeEeechhhccCCCCccccccccc
Confidence 99999999865 23567889999999999999999999998874 2 279999999988763
Q ss_pred --CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhc--CCCCCCHHHHHHHHH
Q psy612 216 --FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSS--KQKVLHENDGLKLFE 291 (1005)
Q Consensus 216 --~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~--g~~~l~~~~~~~~l~ 291 (1005)
++...|+++|+++..|++.++.+....+.++++++|++|.. .+.|...........+... +....+++++.+.+.
T Consensus 158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 236 (291)
T 3rd5_A 158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYS-HTNLQGASGRKLGDALMSAATRVVATDADFGARQTL 236 (291)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGG-GSCC--------------------CHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCC-ccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 45678999999999999998887554444579999998876 4555433221111111111 111234888988888
Q ss_pred HHHhcc
Q psy612 292 QLLIQD 297 (1005)
Q Consensus 292 ~~l~~~ 297 (1005)
.++..+
T Consensus 237 ~l~~~~ 242 (291)
T 3rd5_A 237 YAASQD 242 (291)
T ss_dssp HHHHSC
T ss_pred HHHcCC
Confidence 887764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=203.45 Aligned_cols=210 Identities=11% Similarity=0.013 Sum_probs=158.7
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-.++|++|||||+||||+++|+.|+++|++++ ++.|+. +. +++.+ .+.++ +|+ .++++++++.+ .
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r~~---~~---~~~~~-~~~~~-~D~--~~~~~~~~~~~----~ 80 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVT-ICARNE---EL---LKRSG-HRYVV-CDL--RKDLDLLFEKV----K 80 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESCH---HH---HHHTC-SEEEE-CCT--TTCHHHHHHHS----C
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEcCCH---HH---HHhhC-CeEEE-eeH--HHHHHHHHHHh----c
Confidence 34689999999999999999999999998654 455553 22 22234 57777 999 45666666655 3
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|.|++. +.++||++||+++..+.++...|+++
T Consensus 81 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 156 (249)
T 1o5i_A 81 EVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK---GWGRIVAITSFSVISPIENLYTSNSA 156 (249)
T ss_dssp CCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEcchHhcCCCCCCchHHHH
Confidence 8999999999877 7788999999999999999999999999999997542 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hh-HHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TD-FYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~-~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++..|++.++.+.. ..++++.+|.+|.... .|....... .. .......+ +..++++..+.+..++..
T Consensus 157 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~ 228 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVA--PYGITVNCVAPGWTET-ERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE 228 (249)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-TTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEeeCCCcc-CcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999887643 3356888998876643 332111111 11 11111111 345899999988887754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=200.56 Aligned_cols=196 Identities=15% Similarity=0.097 Sum_probs=155.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++ ..|+.. +|++|++++++++++ +|++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~-~~r~~~-------------------~D~~~~~~v~~~~~~----~g~i 60 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHV-ASRQTG-------------------LDISDEKSVYHYFET----IGAF 60 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEE-ESGGGT-------------------CCTTCHHHHHHHHHH----HCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-ecCCcc-------------------cCCCCHHHHHHHHHH----hCCC
Confidence 5789999999999999999999999986544 455432 899999999988865 4899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|+| ++ .++||++||+++..+.+++..|+++|+
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~ 135 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYL---KQ--GGSITLTSGMLSRKVVANTYVKAAINA 135 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGE---EE--EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhc---cC--CeEEEEecchhhccCCCCchHHHHHHH
Confidence 9999999987436788999999999999999999999999999874 22 478999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-----hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-----DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-----~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. . +++.+|.+|... +.|........ ........+ +..++++..+.+..++..
T Consensus 136 a~~~~~~~la~e~~--~--i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 206 (223)
T 3uce_A 136 AIEATTKVLAKELA--P--IRVNAISPGLTK-TEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN 206 (223)
T ss_dssp HHHHHHHHHHHHHT--T--SEEEEEEECSBC-SGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhc--C--cEEEEEEeCCCc-chhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC
Confidence 99999999988753 2 788899887664 44433221111 111122222 345788888888887764
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.8e-21 Score=207.87 Aligned_cols=210 Identities=14% Similarity=0.064 Sum_probs=164.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHH-cCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~-~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||++++++|++ +|++++++.++.+..++..++++..+.++.++.+|++|.++++++++++.+++|+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999 8986555544434455666777777778899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCC-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--C-------
Q psy612 146 IDGVLHIAGISGLTSNILEAN-YKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--D------- 215 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t-~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--~------- 215 (1005)
+|+||||||+.. ... ...+ .++|++++++|+.|++++.++++|.| .+ .++||++||.++..+ .
T Consensus 83 id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~--~g~iv~~sS~~~~~~~~~~~~~~~~ 155 (276)
T 1wma_A 83 LDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLI---KP--QGRVVNVSSIMSVRALKSCSPELQQ 155 (276)
T ss_dssp EEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE---EE--EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred CCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhh---CC--CCEEEEECChhhhcccccCChhHHh
Confidence 999999999875 333 3344 58999999999999999999998864 22 368999999887643 0
Q ss_pred --------------------------------CCChhhhHHHHHHHHHHHHHHhcccccc--CCceEEEEeCCcccCccc
Q psy612 216 --------------------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKK--YTNKLITINWPLWNNSKF 261 (1005)
Q Consensus 216 --------------------------------~g~~~Yaaana~l~~la~~~~~~g~~~~--~~~~~~si~wg~w~~~Gm 261 (1005)
.....|+++|++++.|++.++.+..... .++++.+|.+|.. .+.|
T Consensus 156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v-~t~~ 234 (276)
T 1wma_A 156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDM 234 (276)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB-CSTT
T ss_pred hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcc-ccCc
Confidence 1237899999999999998877643110 3568899988765 4444
Q ss_pred ccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 262 KIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 262 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
... ....+++++.+.+..++..+
T Consensus 235 ~~~-------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 235 AGP-------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TCT-------------TCSBCHHHHTHHHHHHHSCC
T ss_pred CCc-------------cccCChhHhhhhHhhhhcCc
Confidence 321 23578999999998888644
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-20 Score=212.56 Aligned_cols=188 Identities=13% Similarity=-0.045 Sum_probs=152.7
Q ss_pred ccCCCEEEEECChhHHHHH--HHHHHHHcCCcEEEEecCCCc------------hHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 65 IKQGGTYLITGGTGRLGML--FSDYLINKYSTNLILSGRSKL------------NSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~a--iA~~La~~Ga~~vil~~r~~~------------~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
+..+|++|||||++|||++ +++.|+++|++++++.++... .+.+.+.+++.|.++.+++||++|++
T Consensus 57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence 4679999999999999999 999999999976666554332 24444556677888999999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccC------------ccchh---------------------ccCCHHHHHHHHhhh
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISG------------LTSNI---------------------LEANYKNFYSVLSSK 177 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~------------~~~~~---------------------~~~t~~~~~~~l~~k 177 (1005)
+++++++++.+++|+||+||||||... ...++ .+.+.++|++++++|
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 999999999999999999999999741 01222 467999999999999
Q ss_pred hhHHH-HHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--hhhhHHHHHHHHHHHHHHhcccccc-CCceEEEEeC
Q psy612 178 ISGTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKK-YTNKLITINW 253 (1005)
Q Consensus 178 v~g~~-~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~-~~~~~~si~w 253 (1005)
..+.| .+.+.+.+.+ +. .+.+.||++||+++..+.+++ +.|+++|++|.+|++.++.+.. . .++++.+|.+
T Consensus 217 ~~~~~~~~~~~l~~~~--~~-~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa--~~~GIrVN~V~P 291 (418)
T 4eue_A 217 GGEDWQEWCEELLYED--CF-SDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN--RVIGGRAFVSVN 291 (418)
T ss_dssp SSHHHHHHHHHHHHTT--CE-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH--HHHSCEEEEEEC
T ss_pred hHHHHHHHHHHHHHHh--hh-cCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC--CccCeEEEEEEC
Confidence 99988 6666655432 11 235789999999999999988 9999999999999999988854 3 4568899998
Q ss_pred Cccc
Q psy612 254 PLWN 257 (1005)
Q Consensus 254 g~w~ 257 (1005)
|.+.
T Consensus 292 G~v~ 295 (418)
T 4eue_A 292 KALV 295 (418)
T ss_dssp CCCC
T ss_pred CcCc
Confidence 8774
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=194.81 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=154.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
|++|||||+||||++++++|+++ .|+++.|+.. .++..+++ +. .++.+|++|++++++++++ +|++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~----~~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREV---GA--RALPADLADELEAKALLEE----AGPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHH---TC--EECCCCTTSHHHHHHHHHH----HCSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhc---cC--cEEEeeCCCHHHHHHHHHh----cCCCC
Confidence 57999999999999999999998 6777777642 23333333 22 7889999999999998876 78999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
+||||||... ..++.+.+.++|++++++|+.|++++.+++ ...+.++||++||..+..+.++...|+++|++
T Consensus 69 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 140 (207)
T 2yut_A 69 LLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA-------RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGA 140 (207)
T ss_dssp EEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC-------CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHH
T ss_pred EEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH-------HhcCCcEEEEEcChhhccCCCCcchHHHHHHH
Confidence 9999999876 677888899999999999999999999984 33356899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccch
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 299 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~ 299 (1005)
++.|++.++.+.. ..++++++|.||.+... |..... ......+.+++.++.+..++..+..
T Consensus 141 ~~~~~~~~~~~~~--~~gi~v~~v~pg~v~t~-~~~~~~--------~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 141 LEAYLEAARKELL--REGVHLVLVRLPAVATG-LWAPLG--------GPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp HHHHHHHHHHHHH--TTTCEEEEECCCCBCSG-GGGGGT--------SCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHHHHHh--hhCCEEEEEecCcccCC-CccccC--------CCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999998877632 33458999999887543 311100 0113468999999999988876543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-20 Score=206.81 Aligned_cols=223 Identities=13% Similarity=0.042 Sum_probs=135.3
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecC----------C-CchH-----------HHHHHHHhCCCc---E
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGR----------S-KLNS-----------IIYKKLKKFNNK---A 119 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r----------~-~~~~-----------~~~~~l~~~g~~---v 119 (1005)
.+|++||||| ++|||+++|+.|+++|++++++.++ + +..+ ++.+++++.+.. +
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD 87 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence 5799999999 8999999999999999976665421 1 1111 222333333321 2
Q ss_pred EEEEec------------CCC--------HHHHHHHHHHHHhhcCCccEEEEcCcccC-ccchhccCCHHHHHHHHhhhh
Q psy612 120 IYIQVD------------VSD--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKI 178 (1005)
Q Consensus 120 ~~~~~D------------vtd--------~~~v~~~~~~i~~~~g~idgvIh~AG~~~-~~~~~~~~t~~~~~~~l~~kv 178 (1005)
.++.+| ++| +++++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+
T Consensus 88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 167 (319)
T 2ptg_A 88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS 167 (319)
T ss_dssp EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence 334433 333 45899999999999999999999999752 146788999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 179 ~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
.|+++++++++|+|+ + .++||++||+++..+.+++ ..|+++|+++.+|++.++.+... ..++++.+|.+|.+.
T Consensus 168 ~g~~~l~~~~~~~m~---~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~-~~gIrvn~v~PG~v~ 241 (319)
T 2ptg_A 168 YSFVSLLQHFLPLMK---E--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGR-ARAVRVNCISAGPLK 241 (319)
T ss_dssp HHHHHHHHHHGGGEE---E--EEEEEEEEECC------------------THHHHHHHHHHHHH-HHCCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHh---c--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcc-ccCeeEEEEeeCCcc
Confidence 999999999999852 2 3799999999999999998 79999999999999998876421 134688899888664
Q ss_pred Ccccccccchh-----hhH----HHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 258 NSKFKIGNNEQ-----TDF----YFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 258 ~~Gm~~~~~~~-----~~~----~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+.|....... ... ......+ +..++++..+.+..++..
T Consensus 242 -T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~ 289 (319)
T 2ptg_A 242 -SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSP 289 (319)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTSG
T ss_pred -ChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCc
Confidence 4453221100 000 0011111 346889999888877653
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.4e-20 Score=207.02 Aligned_cols=260 Identities=16% Similarity=0.075 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taC 627 (1005)
...|+.+++++||++||++++++. .|++|+...++.. ...+.+++..+|+. +|++.|+++|
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~~-------------p~~a~~v~~~lGl~~~~~~~~v~~aC 130 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG----LLINTSVSRDYLE-------------PSTASIVSGNLGVSDHCMTFDVANAC 130 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEECCSCCSCSS-------------SCHHHHHHHHHTCCTTCEEEECCCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------ChHHHHHHHHhCCCCCceEEeECCcC
Confidence 468999999999999999988876 6888865433211 13578999999996 7999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
+|++.||+.|++.|++|+++.+||+|++.+... ..+...+++++++.|++||...+++++|||++++||++.+.. .
T Consensus 131 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~---~~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~-~ 206 (345)
T 3s21_A 131 LAFINGMDIAARMLERGEIDYALVVDGETANLV---YEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELV-P 206 (345)
T ss_dssp GHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHH---HHHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGS-T
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEcccchh---hccccccccCCccchhhhhhhccceeeccceeEEEEecCCCC-C
Confidence 999999999999999999999999999985433 222334466778899999999999999999999999986542 1
Q ss_pred CCCceEEEEEEeeeccCCCCCCCCCCC---------------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy612 708 DGDPIHAIIRGSGINYDGKTNGITAPN---------------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 772 (1005)
Q Consensus 708 ~g~~I~avI~g~~~~~dG~~~~~~~p~---------------~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~ 772 (1005)
.+.+|. ++....++....+..+. .....++++++|+++|++++||+|+..|-.+..+
T Consensus 207 ~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---- 278 (345)
T 3s21_A 207 DAPRYK----GGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---- 278 (345)
T ss_dssp TSCEEE----EEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH----
T ss_pred CCccee----eeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH----
Confidence 233444 44433443222111111 1234577899999999999999999999887764
Q ss_pred HHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeecccccc
Q psy612 773 EINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKK 852 (1005)
Q Consensus 773 E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~ 852 (1005)
++++.+.++-... + +. .+-..+||+.+|+-...|..++ +.|.+.|
T Consensus 279 -~~~~~~~lgl~~e--k-~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~~-------------------------- 323 (345)
T 3s21_A 279 -TAAFVKSFGIDPA--K-VM--TIFGEHGNIGPASVPIVLSKLK---ELGRLKK-------------------------- 323 (345)
T ss_dssp -HHHHHHHHTCCGG--G-BC--CCHHHHCBCGGGHHHHHHHHHH---HHTCCCT--------------------------
T ss_pred -HHHHHHHcCcCHH--H-ce--eeHhhcCchHHHHHHHHHHHHH---HcCCCCC--------------------------
Confidence 3455555653221 1 22 1224679999998777766543 3332211
Q ss_pred ccccccCccEEEEcccCCCCceEEEEEe
Q psy612 853 WNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 853 w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
....+..+||.|-+-..++|+
T Consensus 324 -------Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 324 -------GDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp -------TCEEEEEEEETTTEEEEEEEE
T ss_pred -------CCEEEEEEEChhhhheEEEEE
Confidence 124578899999999888886
|
| >3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=220.46 Aligned_cols=139 Identities=12% Similarity=0.064 Sum_probs=92.5
Q ss_pred EcccCCCCceEEEEEeccccccccc-----------CCCCCccCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhC--CCC
Q psy612 865 VSAFGMSGTNAHIVLQEYISTNFKN-----------IKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN--NTV 931 (1005)
Q Consensus 865 v~sfG~gG~nah~il~~~~~~~~~~-----------~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~--~~~ 931 (1005)
+++||+.|||+|+|+|+.|...... ..........+..+++|||+|+++|++++++|.+||+.+ ...
T Consensus 6 ~~~fg~sgtnah~~~e~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~lSA~s~~aL~~~a~~l~~~L~~~~~~~~ 85 (491)
T 3tzy_A 6 FDEFGNIITDSAVAEEPEPELPGVTEEALRLKEAALEELAAQEVTAPLVPLAVSAFLTSRKKAAAAELADWMQSPEGQAS 85 (491)
T ss_dssp -------------------CCCCCCHHHHHHHHHHHHHHTTSCCCCCCEEEEEEESSHHHHHHHHHHHHHHHHSHHHHTS
T ss_pred HhhcCCCCcccccccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 7899999999999999986432100 000111223456789999999999999999999999864 367
Q ss_pred CHHHHHHHHHhcCCcCCcEEEEEeCCHHHHHHHHHhhhcccccc---ccCccccccccccccCccchHHHHHhhhc
Q psy612 932 CIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKI---LHTNYLKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 932 ~l~~~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
+|.|+||||+ +|.||+||++++++|.+||++.|+.+..|.... .......+++.|+|+|||+||.||||.||
T Consensus 86 ~l~dla~tla-~R~~~~~R~~vva~~~~el~~~L~a~a~g~~~~~~~~~~~~~~~~~vfvF~GQGsQ~~gMG~~L~ 160 (491)
T 3tzy_A 86 SLESIGRSLS-RRNHGRSRAVVLAHDHDEAIKGLRAVAAGKQAPNVFSVDGPVTTGPVWVLAGFGAQHRKMGKSLY 160 (491)
T ss_dssp CHHHHHHHHH-HSCCCSEEEEEEESSHHHHHHHHHHHHTTCCCTTEEEESSCCSSCCEEEECCTTTCCTTTTHHHH
T ss_pred CHHHHHHHHh-cccCCCceEEEEECCHHHHHHhhhhhhcCCCCCCceeccCCCCCCEEEEECCCCcchhhhHHHHh
Confidence 8999999996 899999999999999999999999998875431 00112245789999999999999999998
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=199.83 Aligned_cols=220 Identities=12% Similarity=0.062 Sum_probs=158.4
Q ss_pred CCCEEEEECCh--hHHHHHHHHHHHHcCCcEEEEecCCC------------chHHHHHHHHhCCC---cEEEEEec----
Q psy612 67 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSK------------LNSIIYKKLKKFNN---KAIYIQVD---- 125 (1005)
Q Consensus 67 ~~~~~lITGg~--gGIG~aiA~~La~~Ga~~vil~~r~~------------~~~~~~~~l~~~g~---~v~~~~~D---- 125 (1005)
.+|++|||||+ +|||+++|+.|+++|++++++. |++ ..++. +++.. +. ....+.+|
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT-WVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE-EHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTTCC
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEee-ccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccceecc
Confidence 57899999999 9999999999999999765554 321 11111 11111 11 13444443
Q ss_pred ----CC----C--------HHHHHHHHHHHHhhcCCccEEEEcCcccC-ccchhccCCHHHHHHHHhhhhhHHHHHHHHH
Q psy612 126 ----VS----D--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYAL 188 (1005)
Q Consensus 126 ----vt----d--------~~~v~~~~~~i~~~~g~idgvIh~AG~~~-~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~ 188 (1005)
++ | +++++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|++++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 32 2 56899999999999999999999999742 1457889999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-
Q psy612 189 ENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN- 266 (1005)
Q Consensus 189 ~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~- 266 (1005)
+|+|+ + .++||++||+++..+.+++ ..|+++|+++.+|++.++.+..+ ..++++.+|.+|... +.|.....
T Consensus 164 ~~~m~---~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~~gi~vn~v~PG~v~-T~~~~~~~~ 236 (297)
T 1d7o_A 164 LPIMN---P--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR-KQNIRVNTISAGPLG-SRAAKAIGF 236 (297)
T ss_dssp GGGEE---E--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCCB-CCCSSCCSH
T ss_pred HHHhc---c--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCc-ccCcEEEEEeccccc-cchhhhccc
Confidence 99852 2 3789999999999999998 69999999999999998876321 134688899887664 44533211
Q ss_pred -hh-hhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 267 -EQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 267 -~~-~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
.. .........+ +..++++..+.+..++..
T Consensus 237 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~ 269 (297)
T 1d7o_A 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSP 269 (297)
T ss_dssp HHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSG
T ss_pred cHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCc
Confidence 11 1111122222 346899999988877653
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=202.03 Aligned_cols=222 Identities=15% Similarity=0.082 Sum_probs=158.9
Q ss_pred CCCEEEEECC--hhHHHHHHHHHHHHcCCcEEEEecCCCch--------HHHHHHHHhC--CCc---EEEEEec------
Q psy612 67 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLN--------SIIYKKLKKF--NNK---AIYIQVD------ 125 (1005)
Q Consensus 67 ~~~~~lITGg--~gGIG~aiA~~La~~Ga~~vil~~r~~~~--------~~~~~~l~~~--g~~---v~~~~~D------ 125 (1005)
.+|++||||| ++|||+++|+.|+++|++++++ .|++.. .+..+++++. +.. +.++.+|
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALG-TWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEE-ECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEE-ecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence 5799999999 8999999999999999875554 443210 0001112221 211 2334443
Q ss_pred ------CCC--------HHHHHHHHHHHHhhcCCccEEEEcCcccC-ccchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 126 ------VSD--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 126 ------vtd--------~~~v~~~~~~i~~~~g~idgvIh~AG~~~-~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
++| +++++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 343 56899999999999999999999999753 146788999999999999999999999999998
Q ss_pred HHHHHhcCCCcEEEEecCcccccCCCCC-hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---
Q psy612 191 TILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--- 266 (1005)
Q Consensus 191 ~l~~~~~~~~~~iV~~SSia~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--- 266 (1005)
+|+ + .++||++||+++..+.+++ +.|+++|+++.+|++.++.+..+ ..++++.+|.+|... +.|.....
T Consensus 167 ~m~---~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~-~~gIrvn~v~PG~v~-T~~~~~~~~~~ 239 (315)
T 2o2s_A 167 IMN---E--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQ-KYGVRVNAISAGPLK-SRAASAIGKSG 239 (315)
T ss_dssp TEE---E--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECCCC-CHHHHHTTCSS
T ss_pred HHh---c--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCc-ccCeEEEEEeccccc-chhhhhccccc
Confidence 852 2 3799999999999999998 59999999999999998876421 145688999887664 44422111
Q ss_pred --hhhhH----HHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 267 --EQTDF----YFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 267 --~~~~~----~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
..... ..+...+ +..++++....+..++..
T Consensus 240 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 276 (315)
T 2o2s_A 240 EKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSP 276 (315)
T ss_dssp SSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSG
T ss_pred cchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCc
Confidence 00000 1112222 346899999988887653
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=200.69 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=198.3
Q ss_pred cEEEEeeccccCC-CCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 464 LIAIIGMSGRFPA-ARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 464 ~IaIvG~~~~~P~-~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
+|.|+|+++.+|. ..+.++||+.|.+.. + ..+ +.|-.+. +||..+
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~-~~~-~~~i~~r------------------------------tgi~~r 56 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--I-ETS-DEWIVAR------------------------------TGIHAR 56 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----C-CCC-HHHHHHH------------------------------HCCSEE
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--C-CCC-HHHhHHh------------------------------cCceEE
Confidence 6999999999999 578999999875411 1 011 1121100 011111
Q ss_pred hh-ccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCC
Q psy612 543 EA-ERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGP 619 (1005)
Q Consensus 543 ea-~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gp 619 (1005)
.. ..-.+...|+++++++||++||++++++. .|++|+...++.. ...+.+++..+|+ ++|
T Consensus 57 ~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~~-------------p~~a~~v~~~lgl~~~~~ 119 (333)
T 4dfe_A 57 YFAEPDVTTSDLAFIASQRAIEAADIDPQSID----LIIVATSTPDFVF-------------PSTACLLQNKLGIRNHGA 119 (333)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSSSB-------------SCHHHHHHHHTTCCSCCE
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------CcHHHHHHHHhCCCCCCc
Confidence 00 00134678999999999999999988876 7888876543321 1357899999999 789
Q ss_pred cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEE
Q psy612 620 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVL 699 (1005)
Q Consensus 620 s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvL 699 (1005)
++.|+++|+|++.||+.|++.|++|+++.+||+|++.+... + .|+.+..++++|||++++||
T Consensus 120 ~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-------~~~d~~~~~lfGDGA~A~vl 181 (333)
T 4dfe_A 120 AFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRI-----------L-------DFKDRTTCVLFGDGAGAVIL 181 (333)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------C-------CTTCTTTTTTBCEEEEEEEE
T ss_pred EEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccc-----------c-------CcccccceeeeccccEEEEE
Confidence 99999999999999999999999999999999999974321 1 13334567899999999999
Q ss_pred cccchhhcCCCceEEEEEEeeeccCCCC-CCCCCC------------------------CHHHHHHHHHHHHHHcCCCCC
Q psy612 700 KRLSRALSDGDPIHAIIRGSGINYDGKT-NGITAP------------------------NGISQTELIKSVYKKSNLNPE 754 (1005)
Q Consensus 700 k~l~~A~~~g~~I~avI~g~~~~~dG~~-~~~~~p------------------------~~~~q~~~i~~al~~agi~~~ 754 (1005)
++.+ +..|.. +.+.+||.. ..+..| ....+.++++++|+++|++++
T Consensus 182 ~~~~-----~~~i~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~ 252 (333)
T 4dfe_A 182 QASD-----EPGVLA----SALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAE 252 (333)
T ss_dssp EEES-----SCSEEE----EEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred EEcC-----CCCeEE----EEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9754 233433 223333321 111111 125678899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcc
Q psy612 755 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN 834 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n 834 (1005)
||+|+.+|-.+.++ ++++.+.++-... .+.. ....+||+.+|+=...|..+ ++.+.+.|
T Consensus 253 did~~~~Hq~~~~i-----~~~~~~~lgl~~~---~~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~~-------- 311 (333)
T 4dfe_A 253 QIDWLIPHQANIRI-----MQSTCRKLGLPQE---RMIV--TVGEHGNTSAASIPLALDVA---VRDGRIKR-------- 311 (333)
T ss_dssp GCSEEEECCSCHHH-----HHHHHHHTTCCGG---GBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSCT--------
T ss_pred HCCEEEEcCCCHHH-----HHHHHHHhCCCHH---Hhhh--hHHhcCchHHHHHHHHHHHH---HHcCCCCC--------
Confidence 99999999888763 3455555543221 1222 34578999999866655443 23332211
Q ss_pred cccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 835 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 835 ~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
....++.+||.|-+-+.++|+
T Consensus 312 -------------------------Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 312 -------------------------GQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp -------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------------CCEEEEEEEchhheeEEEEEE
Confidence 123467789999999999886
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=181.60 Aligned_cols=187 Identities=17% Similarity=0.143 Sum_probs=150.0
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||+||||++++++|+ +|++++ ++.|+.. ++.+|++|+++++++++.+ |++|+|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~-~~~r~~~----------------~~~~D~~~~~~~~~~~~~~----~~~d~v 62 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVI-TAGRHSG----------------DVTVDITNIDSIKKMYEQV----GKVDAI 62 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEE-EEESSSS----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEE-EEecCcc----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence 69999999999999999999 987654 4455432 4789999999999988764 899999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHHH
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 229 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~ 229 (1005)
|||||... ..++.+.+.++|++.+++|+.|++++.+++.+.| .+ .++||++||..+..+.++...|+++|++++
T Consensus 63 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 63 VSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSL---ND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT 136 (202)
T ss_dssp EECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGE---EE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHh---cc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence 99999876 6778899999999999999999999999987763 22 378999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 230 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 230 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
.|++.++.+. ..++++.+|.+|...+ .|... .. .......+.+++.++.+..++.
T Consensus 137 ~~~~~~~~e~---~~gi~v~~v~pg~v~~-~~~~~-----~~--~~~~~~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 137 AFAKSAAIEM---PRGIRINTVSPNVLEE-SWDKL-----EP--FFEGFLPVPAAKVARAFEKSVF 191 (202)
T ss_dssp HHHHHHTTSC---STTCEEEEEEECCBGG-GHHHH-----GG--GSTTCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc---cCCeEEEEEecCccCC-chhhh-----hh--hccccCCCCHHHHHHHHHHhhh
Confidence 9999988763 2345888888776543 22110 00 0112346889999998877764
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-20 Score=236.40 Aligned_cols=277 Identities=13% Similarity=0.088 Sum_probs=194.1
Q ss_pred CCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC
Q psy612 538 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK 617 (1005)
Q Consensus 538 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~ 617 (1005)
.+..++.+.++....++++++.+||+|||++++++. .+++++... + . ....+.+|+..||++
T Consensus 677 ~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId----~ii~~t~~~-~--------~-----~p~~a~~v~~~lGl~ 738 (979)
T 3tsy_A 677 SLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT----HLVFCTTSG-V--------E-----MPGADYKLANLLGLE 738 (979)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C--------C-----SSCHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEeeCC-C--------C-----CCcHHHHHHHHcCCC
Confidence 356666666777888999999999999999988776 577776322 1 0 124688999999999
Q ss_pred CCc---ccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCcc
Q psy612 618 GPV---MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 694 (1005)
Q Consensus 618 Gps---~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa 694 (1005)
|+. +.+.+||+|++.||..|+++|++|.++.|||+|++..... -.+...++++...+++++|||+
T Consensus 739 ~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~------------~~~~~~~~~~~~~~~~lfGDGA 806 (979)
T 3tsy_A 739 PSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVT------------FRGPSEDALDSLVGQALFGDGS 806 (979)
T ss_dssp TTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTT------------CCCCCSSCHHHHHHHHHBCCEE
T ss_pred cccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchh------------eeCCCccCHHHHhhhhhccCce
Confidence 865 9999999999999999999999999999999999963211 0111223344444578999999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCC--------------CC--HHHHHHHHHHHHHHcCCCCCCccE
Q psy612 695 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITA--------------PN--GISQTELIKSVYKKSNLNPEDINY 758 (1005)
Q Consensus 695 ~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~--------------p~--~~~q~~~i~~al~~agi~~~~I~y 758 (1005)
|++||++.+++...+..++....+.....+.....-.. |+ .....++++++|+++|++++||+|
T Consensus 807 ~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~ 886 (979)
T 3tsy_A 807 AAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLF 886 (979)
T ss_dssp EEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSE
T ss_pred EEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccce
Confidence 99999998887777888888888877655443211000 10 133678999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 837 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i 837 (1005)
+++|.+++++.|.+| +.++-... + +... .+-..+||+-+||=...|-.++-.++.|-. +
T Consensus 887 ~~~Hq~~~~i~~~~~-----~~lgl~~~--k-~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~------------v 946 (979)
T 3tsy_A 887 WIAHPGGPAILDAVE-----AKLNLDKK--K-LEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER------------A 946 (979)
T ss_dssp EEECCSCHHHHHHHH-----HHHTCCTT--T-THHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC------------S
T ss_pred EEECCCChHHHHHHH-----HHcCCChH--H-HHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc------------c
Confidence 999999987665544 44442211 1 1111 123456999999877777665443333210 0
Q ss_pred ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 838 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 838 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
. ........+..+||.|-+-+.++|+-
T Consensus 947 ~-----------------~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 947 T-----------------TGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp B-----------------TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred c-----------------CCCCcceeEEEEeCCchHHHHHHHHh
Confidence 0 01112345788999999999999873
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.4e-19 Score=205.21 Aligned_cols=254 Identities=15% Similarity=0.140 Sum_probs=181.2
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCC--cccc-c
Q psy612 548 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP--VMAI-N 624 (1005)
Q Consensus 548 dpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gp--s~~v-~ 624 (1005)
.....++++++.+||+|||++++++. .|++|+... +. . ..++.+++..||++++ ++.+ +
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lGl~~~~~~~~v~~ 172 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG----LLVLATSTG-FI--------A-----PGVDVAIVKELGLSPSISRVVVNF 172 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESSC-CC--------S-----SCHHHHHHHHHTCCTTCEEEEEES
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-Cc--------c-----ChHHHHHHHHcCcCCCcceeEecc
Confidence 35678999999999999999876554 566666543 11 1 1367899999999996 5777 9
Q ss_pred ccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC----CceecCccEEEEEc
Q psy612 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLK 700 (1005)
Q Consensus 625 taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~----G~~~gEGa~~vvLk 700 (1005)
++|+|++.||+.|++.|++|.+|.+||+|++.+... + -|+.+.+ |+++|||++++||+
T Consensus 173 ~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~-----------~-------~~~~~r~~~~~~~lfGDGA~A~vL~ 234 (393)
T 1ted_A 173 MGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN-----------A-------VFADDINDVVIHSLFGDGCAALVIG 234 (393)
T ss_dssp CGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGG-----------C-------CCCSSHHHHHHHHHBCEEEEEEEEE
T ss_pred chhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccc-----------C-------CCCCCHHHhhhhhhhcCccEEEEEe
Confidence 999999999999999999999999999999974321 0 0444554 89999999999999
Q ss_pred ccchhhcCCCceEEEEEEeee--ccCCCCC--------------CCCCCC--HHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy612 701 RLSRALSDGDPIHAIIRGSGI--NYDGKTN--------------GITAPN--GISQTELIKSVYKKSNLNPEDINYIITH 762 (1005)
Q Consensus 701 ~l~~A~~~g~~I~avI~g~~~--~~dG~~~--------------~~~~p~--~~~q~~~i~~al~~agi~~~~I~yve~h 762 (1005)
+.+++..+|. .++.|.+++. ..||... +-..|+ ...+.++|+++|+++|++++||+||.+|
T Consensus 235 ~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H 313 (393)
T 1ted_A 235 ASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIH 313 (393)
T ss_dssp EECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEEC
T ss_pred cCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEEC
Confidence 8776644454 5667777643 3666321 111122 3467889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCCCceeE-eccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCC
Q psy612 763 GTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 841 (1005)
Q Consensus 763 gtgt~~gD~~E~~al~~~~~~~~~~~~~~~i-gsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~ 841 (1005)
++++++.|.+| +.++-.. ..+.+ ..+...+||+.+|+-...|-.++ +.+.+.
T Consensus 314 ~~~~~i~d~~~-----~~lgl~~---~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~~---------------- 366 (393)
T 1ted_A 314 PGGPKIIEQSV-----RSLGISA---ELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAESA---------------- 366 (393)
T ss_dssp CSCHHHHHHHH-----HHHTCCG---GGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSSS----------------
T ss_pred CCcHHHHHHHH-----HHcCCCH---HHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCccC----------------
Confidence 99998776554 3444221 11222 24567789999988666553332 232110
Q ss_pred CCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 842 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 842 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
.+..+.++.+||.|.+.+.++|+-
T Consensus 367 ----------------~~Gd~vll~~~G~G~t~~~~~l~~ 390 (393)
T 1ted_A 367 ----------------KAISTGVAFAFGPGVTVEGMLFDI 390 (393)
T ss_dssp ----------------SSSEEEEEEEEETTTEEEEEEEEE
T ss_pred ----------------CCCCeEEEEEeccchhhhhhheee
Confidence 011356789999999999999873
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-19 Score=189.76 Aligned_cols=199 Identities=14% Similarity=0.045 Sum_probs=140.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||+||||+++|+.|+++|++++++.++.+..+. .+.+|++|.++++++++++ +|+||+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~---~~~id~ 65 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKC---SKGMDG 65 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------ccccCCCCHHHHHHHHHHh---CCCCCE
Confidence 689999999999999999999999876555444332210 1678999999988887633 389999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc----------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI---------------- 212 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~---------------- 212 (1005)
||||||+.. .. +.|++++++|+.|++++.++++|+|+ +...++||++||+++.
T Consensus 66 lv~~Ag~~~-~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~ 134 (257)
T 1fjh_A 66 LVLCAGLGP-QT-------KVLGNVVSVNYFGATELMDAFLPALK---KGHQPAAVVISSVASAHLAFDKNPLALALEAG 134 (257)
T ss_dssp EEECCCCCT-TC-------SSHHHHHHHHTHHHHHHHHHHHHHHH---TSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred EEECCCCCC-Cc-------ccHHHHHHHhhHHHHHHHHHHHHHHh---hcCCcEEEEECChhhhccccccchhhhhhccc
Confidence 999999754 11 12899999999999999999999964 3346899999999988
Q ss_pred ------------cCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-chh-hhHHHH--hc
Q psy612 213 ------------LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFK--SS 276 (1005)
Q Consensus 213 ------------~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~--~~ 276 (1005)
.+.++...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+ ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~ 211 (257)
T 1fjh_A 135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG--EAGVRLNTIAPGATE-TPLLQAGLQDPRYGESIAKFVP 211 (257)
T ss_dssp CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECC----------------------CCC
T ss_pred chhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh--hcCeEEEEEeeCCCC-CccchhhccchhHHHHHHhccc
Confidence 3445778999999999999998877632 334588999987664 4443221 110 011111 11
Q ss_pred C-CCCCCHHHHHHHHHHHHhcc
Q psy612 277 K-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 277 g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
. ....++++.++.+..++..+
T Consensus 212 ~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 212 PMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp STTSCCCTHHHHHHHHHHTSGG
T ss_pred ccCCCCCHHHHHHHHHHHhCch
Confidence 1 13578899999988887543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=172.00 Aligned_cols=199 Identities=14% Similarity=0.039 Sum_probs=143.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||+||||+++++.|+++|++++++.++.+..+. .+.+|++|.++++++++++ .+++|+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~ 65 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG 65 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence 589999999999999999999999875555444332110 1678999999998888754 378999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------- 215 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------------- 215 (1005)
||||||... . .+.|+..+++|+.|++++.+++.+.|+ +...++||++||.++..+.
T Consensus 66 vi~~Ag~~~-~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~ 134 (255)
T 2dkn_A 66 LVCCAGVGV-T-------AANSGLVVAVNYFGVSALLDGLAEALS---RGQQPAAVIVGSIAATQPGAAELPMVEAMLAG 134 (255)
T ss_dssp EEECCCCCT-T-------SSCHHHHHHHHTHHHHHHHHHHHHHHH---TSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred EEECCCCCC-c-------chhHHHHHHHHhHHHHHHHHHHHHHhh---hcCCceEEEEeccccccccccccchhhhhccc
Confidence 999999754 1 123889999999999999999999864 3346889999999988765
Q ss_pred -------------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhc--C-
Q psy612 216 -------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSS--K- 277 (1005)
Q Consensus 216 -------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~--g- 277 (1005)
++...|+++|++++.+++.++.+.. ..++++++|.+|...+. |.... ........... .
T Consensus 135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~gi~v~~v~pg~v~~~-~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T 2dkn_A 135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA--GRGVRLNVVAPGAVETP-LLQASKADPRYGESTRRFVAPL 211 (255)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECCBCSH-HHHHHHHCTTTHHHHHSCCCTT
T ss_pred chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEcCCcccch-hhhhcccchhhHHHHHHHHHHh
Confidence 5677899999999999998776521 22348888888766432 22111 00011111111 1
Q ss_pred CCCCCHHHHHHHHHHHHhcc
Q psy612 278 QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 278 ~~~l~~~~~~~~l~~~l~~~ 297 (1005)
...+.+++.++.+..++..+
T Consensus 212 ~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 212 GRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp SSCBCHHHHHHHHHHHHSGG
T ss_pred cCCCCHHHHHHHHHHHhCCC
Confidence 13578999999998888654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.6e-16 Score=168.75 Aligned_cols=182 Identities=18% Similarity=0.187 Sum_probs=135.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||+||||+++++.|+++|++++++.++..... +.++.++.+|++|.+++.++++ ++|
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~D 66 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GCD 66 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence 578999999999999999999999976555544432211 4678999999999999988775 689
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc------------cCC
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------------LGD 215 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~------------~g~ 215 (1005)
+||||||+.. .+.|++++++|+.|++++.+++.+ ...++||++||++++ .+.
T Consensus 67 ~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~-------~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~ 130 (267)
T 3rft_A 67 GIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA-------HGQPRIVFASSNHTIGYYPQTERLGPDVPA 130 (267)
T ss_dssp EEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEEEEGGGGTTSBTTSCBCTTSCC
T ss_pred EEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEcchHHhCCCCCCCCCCCCCCC
Confidence 9999999843 234788999999999999999632 356799999998876 233
Q ss_pred CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHH
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l 294 (1005)
.....|+++|.+++.|++.+..+ ++ +++.|..+.... ++... .. . ...+..++..+.+..++
T Consensus 131 ~~~~~Y~~sK~~~e~~~~~~a~~~g~------~~~~vr~~~v~~-~~~~~-----~~-~----~~~~~~~d~a~~~~~~~ 193 (267)
T 3rft_A 131 RPDGLYGVSKCFGENLARMYFDKFGQ------ETALVRIGSCTP-EPNNY-----RM-L----STWFSHDDFVSLIEAVF 193 (267)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECBCSS-SCCST-----TH-H----HHBCCHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhCC------eEEEEEeecccC-CCCCC-----Cc-e----eeEEcHHHHHHHHHHHH
Confidence 45688999999999999876543 33 666666655543 22111 01 1 12467888888888887
Q ss_pred hccc
Q psy612 295 IQDK 298 (1005)
Q Consensus 295 ~~~~ 298 (1005)
..+.
T Consensus 194 ~~~~ 197 (267)
T 3rft_A 194 RAPV 197 (267)
T ss_dssp HCSC
T ss_pred hCCC
Confidence 7654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.2e-15 Score=157.77 Aligned_cols=189 Identities=16% Similarity=0.179 Sum_probs=135.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcE-EEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA-IYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v-~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
-.++++|||||+|+||+++++.|+++|..++++.++.+..+ .+... .+ .++.+|++ +.+.+.++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~----~~~~~--~~~~~~~~Dl~---------~~~~~~~~ 83 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP----ELRER--GASDIVVANLE---------EDFSHAFA 83 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHT--TCSEEEECCTT---------SCCGGGGT
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH----HHHhC--CCceEEEcccH---------HHHHHHHc
Confidence 36889999999999999999999999986555554433332 23332 46 78899999 34456677
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---CCChhh
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---FGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~---~g~~~Y 221 (1005)
++|+||||||... . ++|+..+++|+.|+.++.+++.. ...++||++||..+..+. .....|
T Consensus 84 ~~D~vi~~ag~~~-~--------~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~iv~~SS~~~~~~~~~~~~~~~Y 147 (236)
T 3e8x_A 84 SIDAVVFAAGSGP-H--------TGADKTILIDLWGAIKTIQEAEK-------RGIKRFIMVSSVGTVDPDQGPMNMRHY 147 (236)
T ss_dssp TCSEEEECCCCCT-T--------SCHHHHHHTTTHHHHHHHHHHHH-------HTCCEEEEECCTTCSCGGGSCGGGHHH
T ss_pred CCCEEEECCCCCC-C--------CCccccchhhHHHHHHHHHHHHH-------cCCCEEEEEecCCCCCCCCChhhhhhH
Confidence 9999999999754 2 35788999999999999999632 246789999998776654 467899
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++|.+++.+.+ ..++ +++.|.++.+.+.+. ........ ........+.+++.++.+..++..+
T Consensus 148 ~~sK~~~e~~~~---~~gi------~~~~lrpg~v~~~~~-~~~~~~~~--~~~~~~~~i~~~Dva~~~~~~~~~~ 211 (236)
T 3e8x_A 148 LVAKRLADDELK---RSSL------DYTIVRPGPLSNEES-TGKVTVSP--HFSEITRSITRHDVAKVIAELVDQQ 211 (236)
T ss_dssp HHHHHHHHHHHH---HSSS------EEEEEEECSEECSCC-CSEEEEES--SCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHH---HCCC------CEEEEeCCcccCCCC-CCeEEecc--CCCcccCcEeHHHHHHHHHHHhcCc
Confidence 999999998875 4444 888888877654321 11100000 0001145678999999999988765
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.5e-15 Score=170.39 Aligned_cols=277 Identities=10% Similarity=0.093 Sum_probs=188.1
Q ss_pred CCCCCCccCCCChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHH
Q psy612 529 IDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 529 ~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ 608 (1005)
...||+.|++++.++...+.+...|+.+++.+||++||++++++. .|++++..+ + . ....+.
T Consensus 77 p~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~-~--------~-----~p~~a~ 138 (387)
T 3a5r_A 77 PNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT----HLIVCCLAG-V--------D-----MPGADY 138 (387)
T ss_dssp HHHHSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C--------E-----ESCHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC-C--------C-----CCcHHH
Confidence 345888899999999999999999999999999999999887775 577776542 1 0 113678
Q ss_pred HHHHHhCCCCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCC---
Q psy612 609 RLAYFMDLKGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFD--- 682 (1005)
Q Consensus 609 ris~~~~l~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd--- 682 (1005)
+++..+|++++ .+.|..+|+|++.||+.|++.|++|.++.+||+|++.+.. .+ ..|+|
T Consensus 139 ~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~----------~~------~~~~d~~~ 202 (387)
T 3a5r_A 139 QLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT----------CF------RGPSETHL 202 (387)
T ss_dssp HHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTT----------TC------CCCCSSCC
T ss_pred HHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccch----------hh------cCCCccch
Confidence 99999999986 7899999999999999999999999999999999997432 01 12333
Q ss_pred -CCCCCceecCccEEEEEcccchhhcCC-CceEEEEEEeeecc--CCC-C-------CC--C-CCCC-----HHHHHHHH
Q psy612 683 -ERANGLVPSEAVVAVVLKRLSRALSDG-DPIHAIIRGSGINY--DGK-T-------NG--I-TAPN-----GISQTELI 742 (1005)
Q Consensus 683 -~~a~G~~~gEGa~~vvLk~l~~A~~~g-~~I~avI~g~~~~~--dG~-~-------~~--~-~~p~-----~~~q~~~i 742 (1005)
....++++|||++++||++.+.. + ......+.+.+... ++. . .+ + ..+. .....+++
T Consensus 203 ~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (387)
T 3a5r_A 203 DSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCL 279 (387)
T ss_dssp SSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHH
Confidence 23467899999999999875431 1 11012333322111 110 0 00 0 0111 23455788
Q ss_pred HHHHHHcCCC-CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHh-
Q psy612 743 KSVYKKSNLN-PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSI- 819 (1005)
Q Consensus 743 ~~al~~agi~-~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l- 819 (1005)
+++|+++|++ ++|| ++-.|-.+..+ ++++.+.++-.. ..+... .+...+||+-+|+-...|-.++-.=
T Consensus 280 ~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~---ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~ 350 (387)
T 3a5r_A 280 SDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEK---EKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL 350 (387)
T ss_dssp HHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCG---GGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCCh---HHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc
Confidence 9999999998 8899 89999887654 334555554221 112222 3456789999999877776654321
Q ss_pred hcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 820 KYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 820 ~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+.|.+.| .+.....++.+||.|-+-+.++|+-
T Consensus 351 ~~G~~~~------------------------------G~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 351 ENGQATT------------------------------GEGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HTTCSBT------------------------------TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred ccCCCCC------------------------------CCCcceEEEEEecCcceeeehhhee
Confidence 1110100 0011345788999999999999874
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=160.70 Aligned_cols=183 Identities=11% Similarity=-0.055 Sum_probs=136.0
Q ss_pred cCCCEEEEECChhHHHHHHHHHHH-HcCCcEEEEecCCCc------------hHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSKL------------NSIIYKKLKKFNNKAIYIQVDVSDKLKM 132 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La-~~Ga~~vil~~r~~~------------~~~~~~~l~~~g~~v~~~~~Dvtd~~~v 132 (1005)
...|++|||||++|||++++..|+ +.|+.++++...++. .....+.+++.|.+...+.||+++++++
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 457999999999999999999999 678877766654432 1345667788899999999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCcccCcc------------c---------------------hhccCCHHHH---HHHHhh
Q psy612 133 ISEINSIINNIGPIDGVLHIAGISGLT------------S---------------------NILEANYKNF---YSVLSS 176 (1005)
Q Consensus 133 ~~~~~~i~~~~g~idgvIh~AG~~~~~------------~---------------------~~~~~t~~~~---~~~l~~ 176 (1005)
+++++++.+++|+||+||||++..... + .+...+.+++ ..+|..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~ 207 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG 207 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence 999999999999999999999965210 0 0112344444 445555
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCC
Q psy612 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 254 (1005)
Q Consensus 177 kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~--g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 254 (1005)
.....|...+...++| .+.+.+|.+|++.+.. +.++.+.+++||+.|++.+++++.+.. ++++.++..+
T Consensus 208 s~~s~w~~al~~a~ll-----a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~----~~~a~v~v~~ 278 (401)
T 4ggo_A 208 EDWERWIKQLSKEGLL-----EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP----SIRAFVSVNK 278 (401)
T ss_dssp HHHHHHHHHHHHTTCE-----EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT----TEEEEEEECC
T ss_pred hHHHHHHHHHHhhhcc-----cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC----CCcEEEEEcC
Confidence 5556666666655542 2468899999988754 444566899999999999999998743 3456666555
Q ss_pred ccc
Q psy612 255 LWN 257 (1005)
Q Consensus 255 ~w~ 257 (1005)
+..
T Consensus 279 a~v 281 (401)
T 4ggo_A 279 GLV 281 (401)
T ss_dssp CCC
T ss_pred ccc
Confidence 553
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=153.72 Aligned_cols=194 Identities=10% Similarity=-0.014 Sum_probs=130.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCC--cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga--~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++++|||||+||||+++++.|+++|+ +++++.++.+..++.. ...+.++.+|++|++++.+++ .
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~-------~ 83 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF-------Q 83 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG-------S
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh-------c
Confidence 468999999999999999999999998 6555554433221110 124778899999988776554 3
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
++|+||||||... . .+.++..+++|+.++.++.+++. +...++||++||.++.. +....|+++
T Consensus 84 ~~d~vi~~ag~~~-~-------~~~~~~~~~~n~~~~~~~~~~~~-------~~~~~~iv~~SS~~~~~--~~~~~Y~~s 146 (242)
T 2bka_A 84 GHDVGFCCLGTTR-G-------KAGAEGFVRVDRDYVLKSAELAK-------AGGCKHFNLLSSKGADK--SSNFLYLQV 146 (242)
T ss_dssp SCSEEEECCCCCH-H-------HHHHHHHHHHHTHHHHHHHHHHH-------HTTCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred CCCEEEECCCccc-c-------cCCcccceeeeHHHHHHHHHHHH-------HCCCCEEEEEccCcCCC--CCcchHHHH
Confidence 6999999999754 2 13467899999999999988742 23467899999987754 345689999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhc-----CCCCCCHHHHHHHHHHHHhccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSS-----KQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~-----g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
|++++.+++.. +. . +++.|.++.+.+.+........ ........ ....+.+++.++.+..++..+.
T Consensus 147 K~~~e~~~~~~---~~----~-~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 218 (242)
T 2bka_A 147 KGEVEAKVEEL---KF----D-RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR 218 (242)
T ss_dssp HHHHHHHHHTT---CC----S-EEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHhc---CC----C-CeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence 99999988643 22 0 4778887766543211100000 00000000 1124678888888888776553
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=7.8e-14 Score=156.94 Aligned_cols=168 Identities=15% Similarity=0.222 Sum_probs=124.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||+++++.|+++|++++++.++.....+..+.+... +..+.++.+|++|++++.++++. ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence 4679999999999999999999999987766665555444445555432 55788999999999999988875 47
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|+||||||... .... .+.....+++|+.|+.++.+++ .+...++||++||.+.+ |.+
T Consensus 79 ~d~vih~A~~~~-~~~~----~~~~~~~~~~n~~~~~~l~~~~-------~~~~~~~iv~~SS~~~~-g~~~~~~~~e~~ 145 (341)
T 3enk_A 79 ITAAIHFAALKA-VGES----VAKPIEYYRNNLDSLLSLLRVM-------RERAVKRIVFSSSATVY-GVPERSPIDETF 145 (341)
T ss_dssp CCEEEECCCCCC-HHHH----HHCHHHHHHHHHHHHHHHHHHH-------HHTTCCEEEEEEEGGGB-CSCSSSSBCTTS
T ss_pred CcEEEECccccc-cCcc----ccChHHHHHHHHHHHHHHHHHH-------HhCCCCEEEEEecceEe-cCCCCCCCCCCC
Confidence 999999999865 3222 2334567888999999988874 23356789999997654 322
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 217 ---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 ---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
....|+.+|.+.+.+++.++.+.- +.+++.+.++..
T Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~lRp~~v 184 (341)
T 3enk_A 146 PLSATNPYGQTKLMAEQILRDVEAADP----SWRVATLRYFNP 184 (341)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEECEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHhhcCC----CceEEEEeeccc
Confidence 236899999999999998765521 236666665444
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.51 E-value=5.1e-14 Score=162.67 Aligned_cols=340 Identities=12% Similarity=0.107 Sum_probs=207.8
Q ss_pred cCcEEEEeeccccCCC-CCHHHHHHHHHcCC--ccccccC-cccccccccccCCcCCCCCccceeeeccCCCCCCCCccC
Q psy612 462 EELIAIIGMSGRFPAA-RNINEFWKILINNK--DVISEIP-EKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF 537 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~-~~~~~fw~~L~~g~--~~i~~~p-~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f 537 (1005)
+.++.|+|+++.+|.- .+.++|++.+.... +...+++ ..+|-. .. ..+..++...-+.+...+|.||
T Consensus 36 ~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~----~~-----tGI~~R~~a~~~~~~~~~p~~~ 106 (413)
T 1xes_A 36 DGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRIC----ER-----SAIKQRYMYLTEEILKKNPDVC 106 (413)
T ss_dssp CSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHH----HT-----SCCCEEECSCCHHHHHTCHHHH
T ss_pred CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHH----hh-----cCcCceEEeeChhhhccCcccc
Confidence 4568999999999984 55667776653211 1111111 011110 00 0011111000000111344444
Q ss_pred C------CChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHH
Q psy612 538 E------ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLA 611 (1005)
Q Consensus 538 ~------is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris 611 (1005)
. +..+....++....|+.+++.+||++||++++++. .|++|+..+ + .. ...+.+|+
T Consensus 107 ~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id----~li~~t~~~-~--------~~-----p~~a~~v~ 168 (413)
T 1xes_A 107 AFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT----HLIFCSTTT-P--------DL-----PGADFEVA 168 (413)
T ss_dssp SSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESCC-C--------EE-----SCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-C--------cc-----chHHHHHH
Confidence 2 34466666788899999999999999999987776 677776543 1 01 12577899
Q ss_pred HHhCCCCC---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCc
Q psy612 612 YFMDLKGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGL 688 (1005)
Q Consensus 612 ~~~~l~Gp---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~ 688 (1005)
..+|++++ .+.|..+|+|++.||..|++.|++|.++.+||+|++.+.. .+..++. ++|+...+++
T Consensus 169 ~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~----------~~~~~~d--~~~~~~~~~~ 236 (413)
T 1xes_A 169 KLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAV----------TFRGPSE--THLDSLVGQA 236 (413)
T ss_dssp HHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTT----------TCCCCCT--TCHHHHHHHH
T ss_pred HHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhh----------hhcCCCc--cchhhcccce
Confidence 99999985 7899999999999999999999999999999999997432 1122322 4666667899
Q ss_pred eecCccEEEEEcccchhhcCCC-ceEEEEEEeeec--cCC-CC-------CC----C--CCCC--HHHHHHHHHHHHHHc
Q psy612 689 VPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGIN--YDG-KT-------NG----I--TAPN--GISQTELIKSVYKKS 749 (1005)
Q Consensus 689 ~~gEGa~~vvLk~l~~A~~~g~-~I~avI~g~~~~--~dG-~~-------~~----~--~~p~--~~~q~~~i~~al~~a 749 (1005)
++|||++++||++.+.. +- .....+.+.+.. .++ .. .+ + ..|. .....++++++|+++
T Consensus 237 lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~ 313 (413)
T 1xes_A 237 LFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQF 313 (413)
T ss_dssp HBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGG
T ss_pred eEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999875431 10 001233333221 111 00 00 0 1111 234567889999999
Q ss_pred CCC-CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHh-hcCCCCC
Q psy612 750 NLN-PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSI-KYKIIPA 826 (1005)
Q Consensus 750 gi~-~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l-~~~~ipp 826 (1005)
|++ .+|| ++-.|-.+..+ ++++.+.++-.. .+ +... .+...+||+-+|+-...|-.++-.= +.|.+.|
T Consensus 314 gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~--ek-~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~ 384 (413)
T 1xes_A 314 KISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDP--TK-LIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTT 384 (413)
T ss_dssp TCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCT--TT-THHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT
T ss_pred CCCCccce-eEEECCCCHHH-----HHHHHHHcCCCh--HH-hHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCC
Confidence 998 8888 88899776543 334555555322 11 2221 2345689999999877776654322 1111100
Q ss_pred CCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 827 SLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 827 ~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
.+.....++.+||.|-+-..++|+-.
T Consensus 385 ------------------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 385 ------------------------------GEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp ------------------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------------------------CCCcceEEEEEecCCcEEeEEEEEec
Confidence 00113457889999999999999743
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.4e-15 Score=167.75 Aligned_cols=104 Identities=12% Similarity=0.027 Sum_probs=87.5
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH-hcCCcCCcEEEEEeCCHHHHHHHHHhhhc----cccc-
Q psy612 901 YHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLM-QGRHHFQYRCAIIISSIEEVVKIINDTLN----SKEK- 974 (1005)
Q Consensus 901 ~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l~~~a~tl~-~~r~~~~~R~a~~~~~~~~l~~~l~~~~~----~~~~- 974 (1005)
++||+|||+|+++|++++++|.+||+.++...|.|+||||+ .+|.||+||.+++++|.+||.++|+.+.. +...
T Consensus 3 ~~ll~lSA~s~~aL~~~~~~l~~~l~~~~~~~l~dla~tl~~~rr~~~~~R~avva~~~~~l~~~L~~~~~~~~~~~~~~ 82 (401)
T 4amm_A 3 HELVVCGAPDAAALTGLLTRVRAAATALSRPELTDLAAGLAAAHRGDVPARFAAAVRDADGLVAALDRALGHLAEGGRRL 82 (401)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSCSSCSEEEEEEESSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccccCCCceEEEEECCHHHHHHHHHHHHhhhccCCccc
Confidence 47999999999999999999999999887778999999999 57889999999999999999999987642 2110
Q ss_pred -cccCcc-----ccccccccccCccchHHHHHhhhc
Q psy612 975 -ILHTNY-----LKGIVSHKFTSNKIIDSYINKLFY 1004 (1005)
Q Consensus 975 -~~~~~~-----~~~~~~~~f~g~g~~~~~~~~~~~ 1004 (1005)
...+++ ..+++.|+|+|||+||+||||.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~fvF~GQGsq~~gMg~~L~ 118 (401)
T 4amm_A 83 LDAGRGLFLVVGGPLRVGLLFPGQAAPVHADRGALG 118 (401)
T ss_dssp EEGGGTEEEESSCCCCEEEEECCCCCCBTTCCCSCC
T ss_pred cCCCCceeecCCCCCCEEEEECCcccchhhhHHHHH
Confidence 001111 356899999999999999999998
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.6e-13 Score=156.09 Aligned_cols=166 Identities=19% Similarity=0.245 Sum_probs=122.8
Q ss_pred CEEEEECChhHHHHHHHHHHH-HcCCcEEEEecCCCc---------hHHHHHHHHhCC-----Cc---EEEEEecCCCHH
Q psy612 69 GTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSKL---------NSIIYKKLKKFN-----NK---AIYIQVDVSDKL 130 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La-~~Ga~~vil~~r~~~---------~~~~~~~l~~~g-----~~---v~~~~~Dvtd~~ 130 (1005)
.++|||||+|+||.++++.|+ ++|..++++.++... .+.+.+.+++.. .. +.++.+|++|++
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 479999999999999999999 999866655443332 233333344331 24 889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
++.++++. ++++|+||||||... ... +.++++..+++|+.|+.++.+++. +...++||++||.+
T Consensus 83 ~~~~~~~~----~~~~d~vih~A~~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~a~~-------~~~~~~iv~~SS~~ 146 (397)
T 1gy8_A 83 FLNGVFTR----HGPIDAVVHMCAFLA-VGE----SVRDPLKYYDNNVVGILRLLQAML-------LHKCDKIIFSSSAA 146 (397)
T ss_dssp HHHHHHHH----SCCCCEEEECCCCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGG
T ss_pred HHHHHHHh----cCCCCEEEECCCccC-cCc----chhhHHHHHHHHhHHHHHHHHHHH-------HhCCCEEEEECCHH
Confidence 98877753 567999999999764 221 345678899999999999999853 23467899999964
Q ss_pred cccCCCC-------------------ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 211 AILGDFG-------------------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 211 ~~~g~~g-------------------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
.+|... ...|+++|.+++.+++.+..+ ++ +++.+.++.+-
T Consensus 147 -v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi------~~~ilRp~~v~ 206 (397)
T 1gy8_A 147 -IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGI------KGICLRYFNAC 206 (397)
T ss_dssp -GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEE
T ss_pred -HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCC------cEEEEecccee
Confidence 444433 578999999999999887654 43 77777765553
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.5e-13 Score=153.22 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=122.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc------hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL------NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~------~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
++++|||||+|+||.++++.|+++|.+++++.++... ..+..+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 4789999999999999999999999877766543322 2233344443 2556888999999999988887652
Q ss_pred hhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------ 214 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------ 214 (1005)
++|+|||+||... ... +.++++..+++|+.|+.++.+++. +...++||++||.+.+-.
T Consensus 81 ----~~d~vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~iv~~SS~~~~g~~~~~~~ 144 (348)
T 1ek6_A 81 ----SFMAVIHFAGLKA-VGE----SVQKPLDYYRVNLTGTIQLLEIMK-------AHGVKNLVFSSSATVYGNPQYLPL 144 (348)
T ss_dssp ----CEEEEEECCSCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred ----CCCEEEECCCCcC-ccc----hhhchHHHHHHHHHHHHHHHHHHH-------HhCCCEEEEECcHHHhCCCCCCCc
Confidence 7999999999754 221 345678899999999999998742 234678999999765421
Q ss_pred ------CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCc
Q psy612 215 ------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 255 (1005)
Q Consensus 215 ------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 255 (1005)
.++...|+.+|.+++.+++....++ .+.+++.+.++.
T Consensus 145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~ 187 (348)
T 1ek6_A 145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD----KTWNAVLLRYFN 187 (348)
T ss_dssp CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC----TTCEEEEEEECE
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHhcC----CCcceEEEeecc
Confidence 1336789999999999998876553 112666666543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.7e-13 Score=153.79 Aligned_cols=147 Identities=14% Similarity=0.104 Sum_probs=112.3
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
...++++|||||+|+||+++++.|+++|..++++.++.....+..+.+ ..+.++.+|++|.+++.++++.+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~----- 87 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF----- 87 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-----
Confidence 346789999999999999999999999986665555333221111111 36888999999999999888765
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----C---
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----F--- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-----~--- 216 (1005)
++|+||||||... .. +.++++ +++|+.|+.++.+++.. ...++||++||.+.+-.. +
T Consensus 88 ~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~-------~~~~~iV~~SS~~~~~~~~~~~~~~~E 152 (330)
T 2pzm_A 88 KPTHVVHSAAAYK-DP-----DDWAED--AATNVQGSINVAKAASK-------AGVKRLLNFQTALCYGRPATVPIPIDS 152 (330)
T ss_dssp CCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHH-------HTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred CCCEEEECCccCC-Cc-----cccChh--HHHHHHHHHHHHHHHHH-------cCCCEEEEecCHHHhCCCccCCCCcCC
Confidence 7999999999765 22 445666 99999999999999753 245789999998764332 2
Q ss_pred ---CChhhhHHHHHHHHHHHHH
Q psy612 217 ---GSCDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 217 ---g~~~Yaaana~l~~la~~~ 235 (1005)
....|+++|.+++.+++..
T Consensus 153 ~~~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 153 PTAPFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp CCCCCSHHHHHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHHHHHHc
Confidence 5678999999999998765
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-13 Score=153.21 Aligned_cols=176 Identities=17% Similarity=0.128 Sum_probs=128.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+|+||..+++.|+++|..++++.++........+.+. .+.++.++.+|++|++++.++++.+ ++
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 81 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----QP 81 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence 46899999999999999999999999876666555443333333332 2456788999999999999888765 69
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------------C
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------G 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~------------g 214 (1005)
|+|||+||... .+.+.++++..+++|+.|+.++.+++.+. ...++||++||.+.+- +
T Consensus 82 d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~E~~~ 150 (357)
T 1rkx_A 82 EIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV------GGVKAVVNITSDKCYDNKEWIWGYRENEA 150 (357)
T ss_dssp SEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH------CCCCEEEEECCGGGBCCCCSSSCBCTTSC
T ss_pred CEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh------CCCCeEEEecCHHHhCCCCcCCCCCCCCC
Confidence 99999999632 12245667889999999999999997542 2357899999986421 1
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccc----ccCCceEEEEeCCcccCc
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIY----KKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~----~~~~~~~~si~wg~w~~~ 259 (1005)
......|+.+|.+.+.+++..+.+... +..+++++.+.++..-+.
T Consensus 151 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~ 199 (357)
T 1rkx_A 151 MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 199 (357)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCC
Confidence 234578999999999999887654100 001238888887766543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=144.99 Aligned_cols=180 Identities=18% Similarity=0.237 Sum_probs=132.4
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~~~g~idg 148 (1005)
++|||||+|+||+++++.|+++|.+++++.++.+..+. . ..+.++.+|++| ++++.++++ .+|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~-~~~~~~~~D~~d~~~~~~~~~~-------~~d~ 66 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------Y-NNVKAVHFDVDWTPEEMAKQLH-------GMDA 66 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------C-TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------c-CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence 58999999999999999999999765555544332111 1 468999999999 888776553 6999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-------Chhh
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-------SCDY 221 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-------~~~Y 221 (1005)
||||||... . ..+++|+.|+.++.+++. +...++||++||+.+..+.+. ...|
T Consensus 67 vi~~ag~~~-~------------~~~~~n~~~~~~l~~a~~-------~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y 126 (219)
T 3dqp_A 67 IINVSGSGG-K------------SLLKVDLYGAVKLMQAAE-------KAEVKRFILLSTIFSLQPEKWIGAGFDALKDY 126 (219)
T ss_dssp EEECCCCTT-S------------SCCCCCCHHHHHHHHHHH-------HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHH
T ss_pred EEECCcCCC-C------------CcEeEeHHHHHHHHHHHH-------HhCCCEEEEECcccccCCCcccccccccccHH
Confidence 999999865 2 167889999999998852 335678999999887766665 7899
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+.+|.+++.+.+ +..++ +++.|.++.+.+.+... . .. +.......+..++.++.+..++..+.
T Consensus 127 ~~sK~~~e~~~~--~~~~i------~~~ilrp~~v~g~~~~~-~---~~--~~~~~~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 127 YIAKHFADLYLT--KETNL------DYTIIQPGALTEEEATG-L---ID--INDEVSASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp HHHHHHHHHHHH--HSCCC------EEEEEEECSEECSCCCS-E---EE--ESSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred HHHHHHHHHHHH--hccCC------cEEEEeCceEecCCCCC-c---cc--cCCCcCCcccHHHHHHHHHHHHhCcc
Confidence 999999998886 33443 88888887775432111 0 00 11233456889999999999987654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.6e-13 Score=152.20 Aligned_cols=166 Identities=19% Similarity=0.195 Sum_probs=125.0
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
-.++++|||||+|+||++++++|+++ |...|+++.|++. ..++.+.+. ...+.++.+|++|.+++.++++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~------ 90 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE------ 90 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT------
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh------
Confidence 46799999999999999999999999 8856666666642 223333332 3578999999999988877653
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
++|.|||+||... . +.. .......+++|+.|+.++.+++.+. ..++||++||..+..+ ...|++
T Consensus 91 -~~D~Vih~Aa~~~-~-~~~---~~~~~~~~~~Nv~gt~~l~~aa~~~-------~v~~~V~~SS~~~~~p---~~~Y~~ 154 (344)
T 2gn4_A 91 -GVDICIHAAALKH-V-PIA---EYNPLECIKTNIMGASNVINACLKN-------AISQVIALSTDKAANP---INLYGA 154 (344)
T ss_dssp -TCSEEEECCCCCC-H-HHH---HHSHHHHHHHHHHHHHHHHHHHHHT-------TCSEEEEECCGGGSSC---CSHHHH
T ss_pred -cCCEEEECCCCCC-C-Cch---hcCHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEEecCCccCCC---ccHHHH
Confidence 6899999999754 2 222 2334678999999999999997542 4678999999876543 578999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
+|.+++.+++..+.+.. ..+++++++.++...
T Consensus 155 sK~~~E~~~~~~~~~~~--~~g~~~~~vRpg~v~ 186 (344)
T 2gn4_A 155 TKLCSDKLFVSANNFKG--SSQTQFSVVRYGNVV 186 (344)
T ss_dssp HHHHHHHHHHHGGGCCC--SSCCEEEEECCCEET
T ss_pred HHHHHHHHHHHHHHHhC--CCCcEEEEEEeccEE
Confidence 99999999988765421 234588888876653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=7.3e-13 Score=149.17 Aligned_cols=168 Identities=16% Similarity=0.152 Sum_probs=125.4
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||+|+||+.+++.|+++|..++++.++. .......+.+... .++.++.+|++|.+++.++++.. ++|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d 75 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY-----MPD 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence 5799999999999999999999998766655432 2233334455443 35788999999999998888762 799
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------- 214 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------- 214 (1005)
+|||+||... . +.+.++++..+++|+.|+.++.+++.+.+ ..++||++||.+.+-+
T Consensus 76 ~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~------~~~~iv~~SS~~v~g~~~~~~~~e~~~~~ 144 (347)
T 1orr_A 76 SCFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQYN------SNCNIIYSSTNKVYGDLEQYKYNETETRY 144 (347)
T ss_dssp EEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC------TTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred EEEECCcccC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC------CCceEEEeccHHHhCCCCcCCcccccccc
Confidence 9999999754 1 22345678899999999999999986641 1258999999764321
Q ss_pred --------------CCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCc
Q psy612 215 --------------DFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 215 --------------~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~ 259 (1005)
......|+.+|.+.+.+++....+ ++ +++.|.++.+.+.
T Consensus 145 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilrp~~v~g~ 198 (347)
T 1orr_A 145 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL------NTVVFRHSSMYGG 198 (347)
T ss_dssp EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCEECT
T ss_pred cccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCC------cEEEEccCceeCc
Confidence 124678999999999999886554 33 7888887766543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=151.92 Aligned_cols=163 Identities=17% Similarity=0.100 Sum_probs=120.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
...+.+++|||||+|+||+.+++.|+++|..++++.++... .. + .+.++.+|++|.+++.++++.
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~----- 72 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD----- 72 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence 34577899999999999999999999999865555443332 11 1 578899999999999888865
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-------- 215 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-------- 215 (1005)
+++|+|||+||... .. .+.++++..+++|+.|+.++.+++ +. + ...++||++||.+.+-+.
T Consensus 73 ~~~d~vih~A~~~~-~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~---~--~~~~~iv~~SS~~v~g~~~~~~~~~~ 141 (321)
T 2pk3_A 73 IKPDYIFHLAAKSS-VK----DSWLNKKGTFSTNVFGTLHVLDAV-RD---S--NLDCRILTIGSSEEYGMILPEESPVS 141 (321)
T ss_dssp HCCSEEEECCSCCC-HH----HHTTCHHHHHHHHHHHHHHHHHHH-HH---H--TCCCEEEEEEEGGGTBSCCGGGCSBC
T ss_pred cCCCEEEEcCcccc-hh----hhhhcHHHHHHHHHHHHHHHHHHH-HH---h--CCCCeEEEEccHHhcCCCCCCCCCCC
Confidence 47999999999754 21 223357889999999999999997 33 2 135789999998654322
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 216 -----FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 -----~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
.....|+.+|.+.+.+++..+.+ ++ +++.+.++..-+
T Consensus 142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilrp~~v~g 184 (321)
T 2pk3_A 142 EENQLRPMSPYGVSKASVGMLARQYVKAYGM------DIIHTRTFNHIG 184 (321)
T ss_dssp TTSCCBCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEEC
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHHHcCC------CEEEEEeCcccC
Confidence 35678999999999999877654 33 777777665543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.4e-13 Score=151.68 Aligned_cols=153 Identities=20% Similarity=0.174 Sum_probs=115.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+|+||.++++.|+++|.+++++.++...... ..++.. +.++.++.+|++|.+++.++++.+ +
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 75 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q 75 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence 5789999999999999999999999865555544332211 223332 246889999999999999888776 7
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cC
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-----------LG 214 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-----------~g 214 (1005)
+|+||||||... . +.+.++++..+++|+.|+.++.+++... . ..++||++||.+.+ .+
T Consensus 76 ~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~~iv~~SS~~vyg~~~~~~~~e~~~ 144 (345)
T 2z1m_A 76 PDEVYNLAAQSF-V----GVSFEQPILTAEVDAIGVLRILEALRTV----K--PDTKFYQASTSEMFGKVQEIPQTEKTP 144 (345)
T ss_dssp CSEEEECCCCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----C--TTCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred CCEEEECCCCcc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C--CCceEEEEechhhcCCCCCCCCCccCC
Confidence 999999999754 1 1233467889999999999999997642 1 13789999998543 12
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhc
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
......|+++|.+.+.+++..+.+
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (345)
T 2z1m_A 145 FYPRSPYAVAKLFGHWITVNYREA 168 (345)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHH
Confidence 344678999999999999887654
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-12 Score=142.92 Aligned_cols=241 Identities=16% Similarity=0.191 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCs 628 (1005)
...|+.+++.+||++||+++++++ .|++|+...++. . + ..+.+++..+|++ .|++.|+.+|+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~--------~----p-~~a~~v~~~lGl~~~~~~~v~~~C~ 120 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE----LIIVATTSHSHA--------Y----P-SAACQVQGLLNIDDAISFDLAAACT 120 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC----EEEEECSCCSCS--------S----S-CHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C----c-cHHHHHHHHhCCCCccEEEECCccH
Confidence 457899999999999999988876 788887654321 1 1 2578899999995 59999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||..|++.|++|.++.+||+|++.+.. .+.++ .......+|+|++++||++-+
T Consensus 121 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-----------~~~~~-------d~~~~~lfGDGA~A~vl~~~~----- 177 (323)
T 3il3_A 121 GFVYALSVADQFIRAGKVKKALVIGSDLNSR-----------KLDET-------DRSTVVLFGDGAGAVILEASE----- 177 (323)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-----------SCCTT-------CTTTTTTBCEEEEEEEEEEES-----
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEeecccc-----------ccCcc-------ccccccccccceEEEEEEEcC-----
Confidence 9999999999999999999999999997421 11111 122467899999999998643
Q ss_pred CCceEEEEEEeeeccCCCCC-CCCCC--------------C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy612 709 GDPIHAIIRGSGINYDGKTN-GITAP--------------N--------GISQTELIKSVYKKSNLNPEDINYIITHGTG 765 (1005)
Q Consensus 709 g~~I~avI~g~~~~~dG~~~-~~~~p--------------~--------~~~q~~~i~~al~~agi~~~~I~yve~hgtg 765 (1005)
+..|.....+ +||... .+..| + .....++++++|+++|++++||+++-.|-.+
T Consensus 178 ~~~i~~~~~~----s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~ 253 (323)
T 3il3_A 178 QEGIISTHLH----ASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQAN 253 (323)
T ss_dssp SCCEEEEEEE----ECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSC
T ss_pred CCCeEEEEEE----EcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 2345443222 222110 00000 1 1234567899999999999999999999766
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCee
Q psy612 766 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 845 (1005)
Q Consensus 766 t~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~ 845 (1005)
.+ =++++.+.++-... .+.. .+ ..+||+.+|+=...|..+ ++.+.+.|
T Consensus 254 ~~-----i~~~~~~~lgl~~e---k~~~-~l-~~~GNt~sasi~~~L~~~---~~~g~~~~------------------- 301 (323)
T 3il3_A 254 LR-----IITATAKKLEMDMS---QVVV-TL-DKYANNSAATVPVALDEA---IRDGRIQR------------------- 301 (323)
T ss_dssp HH-----HHHHHHHHTTCCGG---GBCC-CH-HHHCBCGGGHHHHHHHHH---HHTTSSCT-------------------
T ss_pred HH-----HHHHHHHHcCcCHH---Hhhc-cH-hhcCchHHHHHHHHHHHH---HHcCCCCC-------------------
Confidence 53 23555555543221 1221 22 356999999866665543 33332211
Q ss_pred eccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 846 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 846 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
....+..+||.|-+-+.++|+
T Consensus 302 --------------Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 302 --------------GQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp --------------TCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCEEEEEEEehhheeEEEEEE
Confidence 123568899999999999886
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=7.3e-13 Score=149.90 Aligned_cols=167 Identities=18% Similarity=0.175 Sum_probs=122.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-C----CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-F----NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~----g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++|||||+|+||..+++.|+++|..++++.++.....+..+.+.+ . +..+.++.+|++|.+++.++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 101 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---- 101 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc----
Confidence 467899999999999999999999998666655543322222222221 1 2468899999999988877764
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 216 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----- 216 (1005)
++|.|||+||... .. .+.++++..+++|+.|+.++.+++.+ ...++||++||.+.+-+..
T Consensus 102 ---~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~v~~SS~~~~~~~~~~~~~ 166 (352)
T 1sb8_A 102 ---GVDYVLHQAALGS-VP----RSINDPITSNATNIDGFLNMLIAARD-------AKVQSFTYAASSSTYGDHPGLPKV 166 (352)
T ss_dssp ---TCSEEEECCSCCC-HH----HHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred ---CCCEEEECCcccC-ch----hhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEeccHHhcCCCCCCCCC
Confidence 6999999999754 21 13456888999999999999998643 2567899999987654332
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 ------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|.+.+.+++..+.+ ++ +++.+.++.+-+
T Consensus 167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~------~~~ilRp~~v~G 209 (352)
T 1sb8_A 167 EDTIGKPLSPYAVTKYVNELYADVFSRCYGF------STIGLRYFNVFG 209 (352)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CCEEEEECCEEC
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHcCC------CEEEEEECceeC
Confidence 3578999999999999876544 33 667777665543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-12 Score=146.67 Aligned_cols=154 Identities=14% Similarity=0.125 Sum_probs=115.1
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++|||||+|+||..+++.|+++|..++++.++... ..+.++.+|++|.+++.++++ .
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM-------G 77 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT-------T
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh-------C
Confidence 467889999999999999999999999877666555432 356788999999998887764 6
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------- 214 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g----------- 214 (1005)
+|+|||+|+... . +.+.++..+++|+.|+.++.+++. ....++||++||...+-.
T Consensus 78 ~d~vih~A~~~~-~------~~~~~~~~~~~nv~~~~~ll~a~~-------~~~~~~~V~~SS~~vyg~~~~~~~~~~E~ 143 (347)
T 4id9_A 78 VSAVLHLGAFMS-W------APADRDRMFAVNVEGTRRLLDAAS-------AAGVRRFVFASSGEVYPENRPEFLPVTED 143 (347)
T ss_dssp CSEEEECCCCCC-S------SGGGHHHHHHHHTHHHHHHHHHHH-------HTTCSEEEEEEEGGGTTTTSCSSSSBCTT
T ss_pred CCEEEECCcccC-c------chhhHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEECCHHHhCCCCCCCCCcCCC
Confidence 999999999754 2 223458899999999999999853 235678999999654321
Q ss_pred --CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 215 --DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 215 --~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
......|+.+|...+.+++...... +.+++.+..+.+-
T Consensus 144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~ 183 (347)
T 4id9_A 144 HPLCPNSPYGLTKLLGEELVRFHQRSG-----AMETVILRFSHTQ 183 (347)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHS-----SSEEEEEEECEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhc-----CCceEEEccceEe
Confidence 1345789999999999998765542 2377777766554
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.3e-13 Score=142.66 Aligned_cols=194 Identities=11% Similarity=0.054 Sum_probs=133.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+|+||+.+++.|+++|.++++ +.|+... +......+.++.+|++|.+++.++++ .+|
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 69 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTA-VVRHPEK------IKIENEHLKVKKADVSSLDEVCEVCK-------GAD 69 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEE-ECSCGGG------CCCCCTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEE-EEcCccc------chhccCceEEEEecCCCHHHHHHHhc-------CCC
Confidence 368999999999999999999999975444 4554321 11122568999999999998887764 589
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG---------- 217 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g---------- 217 (1005)
.|||+||... .. ...+++|+.++.++.+++. +....+||++||.....+.++
T Consensus 70 ~vi~~a~~~~-~~----------~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p 131 (227)
T 3dhn_A 70 AVISAFNPGW-NN----------PDIYDETIKVYLTIIDGVK-------KAGVNRFLMVGGAGSLFIAPGLRLMDSGEVP 131 (227)
T ss_dssp EEEECCCC-----------------CCSHHHHHHHHHHHHHH-------HTTCSEEEEECCSTTSEEETTEEGGGTTCSC
T ss_pred EEEEeCcCCC-CC----------hhHHHHHHHHHHHHHHHHH-------HhCCCEEEEeCChhhccCCCCCccccCCcch
Confidence 9999998643 11 1267889999999998853 234568999999887665543
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch--hhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
...|+.+|...+.+.+.++.. .+.+++.+.++.+-+.+....... .........+...+..++.++++..++.
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~ 206 (227)
T 3dhn_A 132 ENILPGVKALGEFYLNFLMKE-----KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELE 206 (227)
T ss_dssp GGGHHHHHHHHHHHHHTGGGC-----CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc-----cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHh
Confidence 678999999999888877632 133888888776543332211100 0000011223446788999999999888
Q ss_pred ccc
Q psy612 296 QDK 298 (1005)
Q Consensus 296 ~~~ 298 (1005)
.+.
T Consensus 207 ~~~ 209 (227)
T 3dhn_A 207 HPK 209 (227)
T ss_dssp SCC
T ss_pred Ccc
Confidence 764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-12 Score=149.42 Aligned_cols=176 Identities=12% Similarity=0.083 Sum_probs=123.3
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch----------------HHHHHHH-HhCCCcEEEEEecC
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----------------SIIYKKL-KKFNNKAIYIQVDV 126 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~----------------~~~~~~l-~~~g~~v~~~~~Dv 126 (1005)
....+..+|||||+|.||.++++.|+++|.+++++.++.... .+....+ ...+.++.++.+|+
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 345788999999999999999999999998666554322111 0111111 11245688899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEe
Q psy612 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYF 206 (1005)
Q Consensus 127 td~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~ 206 (1005)
+|.+++.++++.. ++|+||||||... .. ....+.+.+...+++|+.|+.++.+++.+. ....+||++
T Consensus 87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~-~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~------~~~~~~V~~ 153 (404)
T 1i24_A 87 CDFEFLAESFKSF-----EPDSVVHFGEQRS-AP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF------GEECHLVKL 153 (404)
T ss_dssp TSHHHHHHHHHHH-----CCSEEEECCSCCC-HH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCEEEEE
T ss_pred CCHHHHHHHHhcc-----CCCEEEECCCCCC-cc-chhhCccchhhhHHHHHHHHHHHHHHHHHh------CCCcEEEEe
Confidence 9999998888765 6999999999754 22 223367778899999999999999997542 112489999
Q ss_pred cCccccc------------------------CCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 207 SSSSAIL------------------------GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 207 SSia~~~------------------------g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
||.+.+- +......|+.+|.+.+.+++....+ ++ +++.|.++..-+
T Consensus 154 SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi------~~~ivrp~~v~G 224 (404)
T 1i24_A 154 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI------RATDLNQGVVYG 224 (404)
T ss_dssp CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEEC
T ss_pred CcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCC------eEEEEecceeeC
Confidence 9975431 1123567999999999998876543 44 778887765543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-13 Score=146.04 Aligned_cols=200 Identities=15% Similarity=0.033 Sum_probs=131.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||++++++|+++| ...|+++.|+.. . +...+..+.++.+|++|.+++.++++ .
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~--~----~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 69 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--G----KEKIGGEADVFIGDITDADSINPAFQ-------G 69 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH--H----HHHTTCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC--c----hhhcCCCeeEEEecCCCHHHHHHHHc-------C
Confidence 46789999999999999999999994 334555555531 1 11224456788999999998887764 4
Q ss_pred ccEEEEcCcccCccchh---------ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy612 146 IDGVLHIAGISGLTSNI---------LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~---------~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~ 216 (1005)
+|.||||||... .... .+.+.+++++.+++|+.++.++.+++.. ...++||++||..+.....
T Consensus 70 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~iv~~SS~~~~~~~~ 141 (253)
T 1xq6_A 70 IDALVILTSAVP-KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV-------AGVKHIVVVGSMGGTNPDH 141 (253)
T ss_dssp CSEEEECCCCCC-EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH-------HTCSEEEEEEETTTTCTTC
T ss_pred CCEEEEeccccc-cccccccccccccchhhccccccceeeeHHHHHHHHHHHHH-------cCCCEEEEEcCccCCCCCC
Confidence 899999999754 2111 2223344566889999999999988543 2457899999998765443
Q ss_pred CCh-----hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcCCCCCCHHHHHHH
Q psy612 217 GSC-----DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQKVLHENDGLKL 289 (1005)
Q Consensus 217 g~~-----~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~~~l~~~~~~~~ 289 (1005)
... .|+.+|.+++.+.+. .++ +++.|.++.+.+.+..... ........ ......+.+++..+.
T Consensus 142 ~~~~~~~~~y~~sK~~~e~~~~~---~~i------~~~~vrpg~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dva~~ 211 (253)
T 1xq6_A 142 PLNKLGNGNILVWKRKAEQYLAD---SGT------PYTIIRAGGLLDKEGGVRELLVGKDDELL-QTDTKTVPRADVAEV 211 (253)
T ss_dssp GGGGGGGCCHHHHHHHHHHHHHT---SSS------CEEEEEECEEECSCSSSSCEEEESTTGGG-GSSCCEEEHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHh---CCC------ceEEEecceeecCCcchhhhhccCCcCCc-CCCCcEEcHHHHHHH
Confidence 333 356689999887752 333 7788877766443211000 00001111 122345778888888
Q ss_pred HHHHHhcc
Q psy612 290 FEQLLIQD 297 (1005)
Q Consensus 290 l~~~l~~~ 297 (1005)
+..++..+
T Consensus 212 ~~~~~~~~ 219 (253)
T 1xq6_A 212 CIQALLFE 219 (253)
T ss_dssp HHHHTTCG
T ss_pred HHHHHcCc
Confidence 88887654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=147.49 Aligned_cols=166 Identities=20% Similarity=0.226 Sum_probs=124.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC-----CcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-----NKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g-----~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++|||||+|.||..+++.|+++|..++++.++..........+.... .++.++.+|++|.+++.++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 99 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---- 99 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc----
Confidence 57899999999999999999999999877766665554455555554431 468999999999988877664
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC----
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG---- 217 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g---- 217 (1005)
.+|.|||+||... . ..+.+++...+++|+.|+.++.+++.. ....+||++||.+.+-...+
T Consensus 100 ---~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~-------~~~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 100 ---GVDHVLHQAALGS-V----PRSIVDPITTNATNITGFLNILHAAKN-------AQVQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp ---TCSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred ---CCCEEEECCccCC-c----chhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEecHHhcCCCCCCCCc
Confidence 6999999999754 2 123455778899999999999998532 34678999999865433222
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 218 -------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 218 -------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
...|+.+|...+.+++....+ ++ +++.+..+..-
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilRp~~v~ 206 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTYGF------KTIGLRYFNVF 206 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CCEEEEECSEE
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeeCcee
Confidence 468999999999998876544 44 66666655443
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-13 Score=156.53 Aligned_cols=217 Identities=15% Similarity=0.163 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEE-EEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Cccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGM-FVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv-~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~ta 626 (1005)
...+.++++.+||++ ++ ..+++. ++|+..+.+. ....+..++..||+++ |++.|.++
T Consensus 51 ~~~la~~Aa~~aL~~--~~-----~~~Id~li~~t~~~~~~-------------~p~~a~~v~~~lGl~~~~~~~~v~~a 110 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--ED-----KKKIGMVIVATESAVDA-------------AKAAAVQIHNLLGIQPFARCFEMKEA 110 (396)
T ss_dssp HHHHHHHHHHTTCCH--HH-----HHHEEEEEEECSSCSBS-------------SSCHHHHHHHHTTCCSSCEEEEEEST
T ss_pred HHHHHHHHHHHHHhc--CC-----HHHCCEEEEEeCCCCCC-------------CCCHHHHHHHHhCCCCCceEEEeccc
Confidence 457889999999987 33 345665 4565443211 0136788999999974 99999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||..|++.|++|.++.+||+|++. .... ++ ..++++.|||++++||++.
T Consensus 111 C~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~-------------------~~-~~~~~~~GdGA~A~vl~~~---- 165 (396)
T 1xpm_A 111 CYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYG-------------------LN-SGGEPTQGAGAVAMVIAHN---- 165 (396)
T ss_dssp TTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCC-------------------TT-CSSGGGCEEEEEEEEEEES----
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hccc-------------------cC-CCCCcccccceEEEEeccC----
Confidence 999999999999999999999999999996 2110 11 1368999999999999853
Q ss_pred cCCCceEEEEEEeeecc-CCCCCCCCCC--------CHHH--------HHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy612 707 SDGDPIHAIIRGSGINY-DGKTNGITAP--------NGIS--------QTELIKSVYKKSNLNPEDINYIITHGTGTKLG 769 (1005)
Q Consensus 707 ~~g~~I~avI~g~~~~~-dG~~~~~~~p--------~~~~--------q~~~i~~al~~agi~~~~I~yve~hgtgt~~g 769 (1005)
.+|++...+.+... |... +..| ++.. ..++++++|+++|++++||+|+-.|++++++.
T Consensus 166 ---~~i~~~~~~~g~~~~d~~~--~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~ 240 (396)
T 1xpm_A 166 ---PSILALNEDAVAYTEDVYD--FWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMG 240 (396)
T ss_dssp ---CSSEEECSCCEEEECCCCS--EECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHH
T ss_pred ---CceEEEEeccccccceEEE--eeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHH
Confidence 35776655533322 3221 1222 4443 67889999999999999999999999999987
Q ss_pred CHHHHHHHHHHhccCCCC--CCceeEeccCCCcCchhhchhhHHHHHHH
Q psy612 770 DPVEINALHDVFKNKTYN--QKFCAITSNKSNIGHTFAASGLVSLINLV 816 (1005)
Q Consensus 770 D~~E~~al~~~~~~~~~~--~~~~~igsvK~~iGH~~~AaG~~~lik~~ 816 (1005)
|.+....+....+-...+ .+.-+--.+-..+||+.+|+-..+|..++
T Consensus 241 ~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l 289 (396)
T 1xpm_A 241 KKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL 289 (396)
T ss_dssp HHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHH
Confidence 776532211100000000 00000001235689999999888776654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=137.59 Aligned_cols=181 Identities=10% Similarity=0.013 Sum_probs=122.4
Q ss_pred CCEEEEECChhHHHHHHHHHHH-HcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La-~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.|++|||||+|+||+++++.|+ ++|++++++ .|++. ...+++...+..+.++.+|++|++++.++++ .+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~-~r~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~ 74 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLY-GRQLK--TRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NA 74 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEE-ESSHH--HHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEE-ecCcc--ccchhhccCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence 3689999999999999999999 888865554 45421 0222333345678999999999999887774 58
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh-------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC------- 219 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~------- 219 (1005)
|+||||||.. |+. .+.+++.|+ +...++||++||+.+..+.++..
T Consensus 75 d~vv~~ag~~--------------------n~~-----~~~~~~~~~---~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~ 126 (221)
T 3r6d_A 75 EVVFVGAMES--------------------GSD-----MASIVKALS---RXNIRRVIGVSMAGLSGEFPVALEKWTFDN 126 (221)
T ss_dssp SEEEESCCCC--------------------HHH-----HHHHHHHHH---HTTCCEEEEEEETTTTSCSCHHHHHHHHHT
T ss_pred CEEEEcCCCC--------------------Chh-----HHHHHHHHH---hcCCCeEEEEeeceecCCCCcccccccccc
Confidence 9999999853 111 445555543 34567899999998877666555
Q ss_pred ---hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHH--
Q psy612 220 ---DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL-- 294 (1005)
Q Consensus 220 ---~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l-- 294 (1005)
.|+++|..++.+.+ ..++ +++.|.+|.+.+..+......... .....-.++++++..+.+..++
T Consensus 127 ~~~~y~~~K~~~e~~~~---~~~i------~~~~vrpg~v~~~~~~~~~~~~~~--~~~~~~~~~~~~dvA~~~~~l~~~ 195 (221)
T 3r6d_A 127 LPISYVQGERQARNVLR---ESNL------NYTILRLTWLYNDPEXTDYELIPE--GAQFNDAQVSREAVVKAIFDILHA 195 (221)
T ss_dssp SCHHHHHHHHHHHHHHH---HSCS------EEEEEEECEEECCTTCCCCEEECT--TSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHH---hCCC------CEEEEechhhcCCCCCcceeeccC--CccCCCceeeHHHHHHHHHHHHHh
Confidence 89999999988775 3444 788888877644312111100000 0011112578899999998888
Q ss_pred hcc
Q psy612 295 IQD 297 (1005)
Q Consensus 295 ~~~ 297 (1005)
..+
T Consensus 196 ~~~ 198 (221)
T 3r6d_A 196 ADE 198 (221)
T ss_dssp SCC
T ss_pred cCh
Confidence 544
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=147.57 Aligned_cols=163 Identities=15% Similarity=0.258 Sum_probs=115.6
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++|||||+|+||+++++.|+++|..++++.+......+..+.++.. +.++.++.+|++|++++.++++. + ++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~D~ 76 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----H-AIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----T-TCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----c-CCCE
Confidence 5899999999999999999999987666643222111222333322 45678889999999998888765 2 6999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------CC
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------DF 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------~~ 216 (1005)
||||||... ... ..+++...+++|+.|+.++.+++.. ...++||++||.+.+-. .+
T Consensus 77 vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 144 (338)
T 1udb_A 77 VIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAMRA-------ANVKNFIFSSSATVYGDNPKIPYVESFPTGT 144 (338)
T ss_dssp EEECCSCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred EEECCccCc-ccc----chhcHHHHHHHHHHHHHHHHHHHHh-------cCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence 999999754 221 2344567899999999999887432 24578999999764311 12
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeC
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINW 253 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~w 253 (1005)
+...|+++|.+++.+++.++.+. .+.+++.+.+
T Consensus 145 ~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~ 177 (338)
T 1udb_A 145 PQSPYGKSKLMVEQILTDLQKAQ----PDWSIALLRY 177 (338)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHS----TTCEEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHhc----CCCceEEEee
Confidence 36789999999999999876552 1126665543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.4e-13 Score=145.58 Aligned_cols=182 Identities=19% Similarity=0.222 Sum_probs=131.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+|+||+.+++.|+++|.+ |+++.|+.... ....+.++.+|++|++++.++++ .+|.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 66 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHE-VRLSDIVDLGA--------AEAHEEIVACDLADAQAVHDLVK-------DCDG 66 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEE-EEECCSSCCCC--------CCTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCE-EEEEeCCCccc--------cCCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence 57999999999999999999999864 55555553211 01347889999999988877764 4899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------ 216 (1005)
||||||... .+.++..+++|+.|+.++.+++.+ ...++||++||....-..+
T Consensus 67 vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~ 130 (267)
T 3ay3_A 67 IIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARN-------LGKPRIVFASSNHTIGYYPRTTRIDTEVPRR 130 (267)
T ss_dssp EEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHH-------TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCC
T ss_pred EEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHH-------hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCC
Confidence 999999752 124678999999999999998642 3467899999987654333
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~ 296 (1005)
....|+.+|.+++.+++..... .+++++.+.++.+-+..+ .. .. ....+..++..+.+..++..
T Consensus 131 ~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrp~~v~~~~~----~~--~~-----~~~~~~~~dva~~~~~~~~~ 194 (267)
T 3ay3_A 131 PDSLYGLSKCFGEDLASLYYHK-----FDIETLNIRIGSCFPKPK----DA--RM-----MATWLSVDDFMRLMKRAFVA 194 (267)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHT-----TCCCEEEEEECBCSSSCC----SH--HH-----HHHBCCHHHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHHHHHHHH-----cCCCEEEEeceeecCCCC----CC--Ce-----eeccccHHHHHHHHHHHHhC
Confidence 2478999999999999876432 223778888776532211 11 01 11257889999988888876
Q ss_pred cc
Q psy612 297 DK 298 (1005)
Q Consensus 297 ~~ 298 (1005)
+.
T Consensus 195 ~~ 196 (267)
T 3ay3_A 195 PK 196 (267)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-12 Score=145.96 Aligned_cols=157 Identities=14% Similarity=0.104 Sum_probs=112.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
.++|||||+|+||..+++.|+++|.+++++.++....++ +.. ..+.++.+|++|.+++.++++ .+|.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 80 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERALR-------GLDG 80 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence 479999999999999999999999866666554433221 221 246788999999988876663 5999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 217 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g----------- 217 (1005)
|||+||... .+.++++..+++|+.|+.++.+++.+. ..++||++||.+.+-+..+
T Consensus 81 vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~ 146 (342)
T 2x4g_A 81 VIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-------RVPRILYVGSAYAMPRHPQGLPGHEGLFYD 146 (342)
T ss_dssp EEEC-------------------CHHHHHHHHHHHHHHHHHHH-------TCSCEEEECCGGGSCCCTTSSCBCTTCCCS
T ss_pred EEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-------CCCeEEEECCHHhhCcCCCCCCCCCCCCCC
Confidence 999999643 134567889999999999999997542 4568999999877654444
Q ss_pred -----ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 218 -----SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 -----~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|...+.+++..+..++ +++.+.++.+.+
T Consensus 147 p~~~~~~~Y~~sK~~~e~~~~~~~~~g~------~~~ilrp~~v~g 186 (342)
T 2x4g_A 147 SLPSGKSSYVLCKWALDEQAREQARNGL------PVVIGIPGMVLG 186 (342)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHHHHTTC------CEEEEEECEEEC
T ss_pred ccccccChHHHHHHHHHHHHHHHhhcCC------cEEEEeCCceEC
Confidence 67899999999999987764344 777777766544
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=146.60 Aligned_cols=166 Identities=14% Similarity=0.049 Sum_probs=117.8
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++++|||||+|+||.++++.|+++|..++++.++.... ....+.+. .+..+.++.+|++|.+++.++++.+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----- 85 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence 4678999999999999999999999998666665544321 11122221 2346889999999999999888765
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCC------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSSAILGDFG------ 217 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia~~~g~~g------ 217 (1005)
++|+|||+||... .. .+.++++..+++|+.|+.++.+++.+. . ..+||++||.+.+-+..+
T Consensus 86 ~~d~Vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~~~v~~SS~~v~g~~~~~~~~E~ 153 (335)
T 1rpn_A 86 QPQEVYNLAAQSF-VG----ASWNQPVTTGVVDGLGVTHLLEAIRQF-------SPETRFYQASTSEMFGLIQAERQDEN 153 (335)
T ss_dssp CCSEEEECCSCCC-HH----HHTTSHHHHHHHHTHHHHHHHHHHHHH-------CTTSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred CCCEEEECccccc-hh----hhhhChHHHHHHHHHHHHHHHHHHHHh-------CCCCeEEEEeCHHHhCCCCCCCCCcc
Confidence 6999999999754 21 112346788999999999999996432 3 368999999765432222
Q ss_pred -----ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCc
Q psy612 218 -----SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPL 255 (1005)
Q Consensus 218 -----~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~ 255 (1005)
...|+.+|.+.+.+++....+ ++ +++.+..+.
T Consensus 154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~i~r~~~ 191 (335)
T 1rpn_A 154 TPFYPRSPYGVAKLYGHWITVNYRESFGL------HASSGILFN 191 (335)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECC
T ss_pred cCCCCCChhHHHHHHHHHHHHHHHHHcCC------cEEEEeeCc
Confidence 457999999999999877654 43 555554433
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.8e-13 Score=138.96 Aligned_cols=188 Identities=12% Similarity=-0.001 Sum_probs=127.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|+||+++++.|+++|..++++ .|+.. ....+ ....+.++.+|++|+++ +.++.+|.|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~---~~~~~--~~~~~~~~~~D~~d~~~---------~~~~~~d~v 66 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAV-VRDPQ---KAADR--LGATVATLVKEPLVLTE---------ADLDSVDAV 66 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCHH---HHHHH--TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEE-Eeccc---ccccc--cCCCceEEecccccccH---------hhcccCCEE
Confidence 48999999999999999999999765555 44431 11222 23457889999999876 234579999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC------------
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------------ 217 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g------------ 217 (1005)
|||||... ... ....|+.++.++.++ +.+.. .+||++||+++..+.++
T Consensus 67 i~~ag~~~-~~~-----------~~~~n~~~~~~l~~a-------~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~ 126 (224)
T 3h2s_A 67 VDALSVPW-GSG-----------RGYLHLDFATHLVSL-------LRNSD-TLAVFILGSASLAMPGADHPMILDFPESA 126 (224)
T ss_dssp EECCCCCT-TSS-----------CTHHHHHHHHHHHHT-------CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGG
T ss_pred EECCccCC-Ccc-----------hhhHHHHHHHHHHHH-------HHHcC-CcEEEEecceeeccCCCCccccccCCCCC
Confidence 99999853 111 124678888777777 44445 89999999988776665
Q ss_pred --ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCCCCCCHHHHHHHHHHHH
Q psy612 218 --SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 218 --~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~~~~~~l~~~l 294 (1005)
...|+.+|...+.+....+..++ +++.|.++.+.+.+......... .......+...+..++.++.+..++
T Consensus 127 ~~~~~y~~sK~~~e~~~~~~~~~~i------~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 127 ASQPWYDGALYQYYEYQFLQMNANV------NWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp GGSTTHHHHHHHHHHHHHHTTCTTS------CEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHhcCCC------cEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHh
Confidence 67899999999976544434444 88888887765433221100000 0001122345688999999999998
Q ss_pred hccc
Q psy612 295 IQDK 298 (1005)
Q Consensus 295 ~~~~ 298 (1005)
..+.
T Consensus 201 ~~~~ 204 (224)
T 3h2s_A 201 EHPT 204 (224)
T ss_dssp HSCC
T ss_pred cCcc
Confidence 8764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.3e-12 Score=148.69 Aligned_cols=157 Identities=17% Similarity=0.121 Sum_probs=110.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
++++|||||+|+||.++++.|+++|..++++.++.... .+..+.+.. .+.++.++.+|++|.+++.++++.+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 36899999999999999999999997555544433211 111122211 2457889999999999999888765
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
++|+||||||... . ..+.++++..+++|+.|+.++.+++.+.. .. ..++||++||.+.+-+.
T Consensus 78 --~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~~~iv~~SS~~v~g~~~~~~~~E 146 (372)
T 1db3_A 78 --QPDEVYNLGAMSH-V----AVSFESPEYTADVDAMGTLRLLEAIRFLG---LE-KKTRFYQASTSELYGLVQEIPQKE 146 (372)
T ss_dssp --CCSEEEECCCCCT-T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTT---CT-TTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred --CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhC---CC-CCcEEEEeCChhhhCCCCCCCCCc
Confidence 6999999999754 2 12344577899999999999999975431 00 12789999997654221
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhc
Q psy612 216 ----FGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 216 ----~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
.....|+.+|.+++.+++..+.+
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (372)
T 1db3_A 147 TTPFYPRSPYAVAKLYAYWITVNYRES 173 (372)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 23578999999999999887654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.2e-13 Score=155.40 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=116.3
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc---hHHHHHHHHh---------CCCcEEEEEecCCCHHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL---NSIIYKKLKK---------FNNKAIYIQVDVSDKLKMI 133 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~---~~~~~~~l~~---------~g~~v~~~~~Dvtd~~~v~ 133 (1005)
.+.+++|||||+|+||.++++.|+++|++++++.++... .+.+.+.++. .+.++.++.+|++|++++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 356799999999999999999999888866666555441 2223333322 2467999999999987776
Q ss_pred HHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy612 134 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 134 ~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~ 213 (1005)
.++++|.||||||... ..+.++..+++|+.|+.++.+++.+ ....||++||+..
T Consensus 147 --------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~--------~~~~~v~~SS~~~-- 200 (427)
T 4f6c_A 147 --------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ--------HHARLIYVSTISV-- 200 (427)
T ss_dssp --------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH--------TTCEEEEEEEGGG--
T ss_pred --------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh--------cCCcEEEECchHh--
Confidence 5679999999999754 1246788999999999999999642 4578999999887
Q ss_pred CC--------------------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 214 GD--------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 214 g~--------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|. .....|+.+|...+.+++..+..|+ +++.+.++.+-+
T Consensus 201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~------~~~ivRpg~v~G 259 (427)
T 4f6c_A 201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGL------DGRIVRVGNLTS 259 (427)
T ss_dssp GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTC------CEEEEEECCEES
T ss_pred CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCC------CEEEEeCCeeec
Confidence 32 2668899999999999998776655 777777665543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.42 E-value=5e-13 Score=150.12 Aligned_cols=169 Identities=17% Similarity=0.087 Sum_probs=120.5
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEE-EecCCCHHHHHHHHHHHHhh
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYI-QVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~-~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+.+++++|||||+|+||.++++.|+++|.+++++.++....+.+.+.+.. .+.++.++ .+|++|.+++.++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK----- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence 44678999999999999999999999998655554433322333333332 24568888 799999877665543
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C-----
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F----- 216 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~----- 216 (1005)
++|+||||||... .. +++++.+++|+.|+.++.+++.+ ....++||++||.+..... +
T Consensus 83 --~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~------~~~~~~iv~~SS~~~~~~~~~~~~~~ 146 (342)
T 1y1p_A 83 --GAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAA------TPSVKRFVLTSSTVSALIPKPNVEGI 146 (342)
T ss_dssp --TCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHT------CTTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred --CCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHh------CCCCcEEEEeccHHHhcCCCCCCCCc
Confidence 6999999999765 21 24567999999999999998632 2345789999998765321 1
Q ss_pred -------------------------CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 217 -------------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 -------------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+++|.+.+.+++....+.. .+++++.+.++...
T Consensus 147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~~~rp~~v~ 209 (342)
T 1y1p_A 147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK---PHFTLNAVLPNYTI 209 (342)
T ss_dssp EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC---CSSEEEEEEESEEE
T ss_pred ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC---CCceEEEEcCCceE
Confidence 235799999999999988765421 13467777665543
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.1e-12 Score=143.40 Aligned_cols=248 Identities=13% Similarity=0.183 Sum_probs=161.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCccccccc
Q psy612 547 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTA 626 (1005)
Q Consensus 547 mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~ta 626 (1005)
..-...|+.+++.+||++||+++++++ .|++|+...++. .+ ..+.+++..+|++.|++.|+.+
T Consensus 114 ~~~~~~La~~Aa~~AL~~agi~~~dId----~vi~~t~t~~~~--------~p-----~~a~~v~~~LGl~~~~~dv~~a 176 (392)
T 3led_A 114 LSILAEMAVTAAEQAIERWGKPRERIG----AVLCACSNMQRA--------YP-----AMAIEVQNALGLGGFAFDMNVA 176 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSCGGGEE----EEEEESSCCSCS--------BS-----CHHHHHHHHTTCCSEEEEEECG
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC--------cc-----HHHHHHHHHhCCCCeEEEECCc
Confidence 334578999999999999999887765 677776544322 11 2678899999999999999999
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|+|++.||..|++.|++|.++.+||+|++.+. . .+.++ | ....+.+|+|++++||++-+...
T Consensus 177 C~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S-~----------~~d~~------d-r~t~~lFGDGA~A~vl~~~~~~~ 238 (392)
T 3led_A 177 CSSATFGLKTAADFVGGGSVDAVLMVNPEICS-G----------HLNFR------D-RDSHFIFGDVATAAIVERADDAQ 238 (392)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------GCCTT------C-TTTTTTBCEEEEEEEEEEGGGCC
T ss_pred cHHHHHHHHHHHHHHHCCCCCEEEEEeehhcC-C----------cCCcC------c-ccCCcccccccEEEEEEecCCCC
Confidence 99999999999999999999999999999742 1 11111 1 12467899999999998754310
Q ss_pred cCCCceEEEEEEeeeccCCCC-----CC---------------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccE
Q psy612 707 SDGDPIHAIIRGSGINYDGKT-----NG---------------ITAPNG--------ISQTELIKSVYKKSNLNPEDINY 758 (1005)
Q Consensus 707 ~~g~~I~avI~g~~~~~dG~~-----~~---------------~~~p~~--------~~q~~~i~~al~~agi~~~~I~y 758 (1005)
.+..|.+. ....++.. .+ ...-++ ....++++++|+++|++++||++
T Consensus 239 -~~~~i~~~----~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~ 313 (392)
T 3led_A 239 -GGWSILGT----KLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKR 313 (392)
T ss_dssp -SSEEEEEE----EEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSE
T ss_pred -CCCeEEEE----EEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 12233332 22222210 00 001122 23346789999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHh-ccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 837 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~-~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i 837 (1005)
+-.|-.+.. =++++.+.+ +-..+..+ ++ .+=...||+-+|+=...|-. + .+.+.
T Consensus 314 ~v~Hqan~~-----i~~~~~~~llgl~~~~~k-~~--~~l~~~GNtssAsipl~L~~----~-~~~~~------------ 368 (392)
T 3led_A 314 MWLHQANIN-----MNEIIGRKVLGRDPTRDE-NV--IILDDYANTSSAGSIIAFHK----H-QDDMA------------ 368 (392)
T ss_dssp EEECSSCHH-----HHHHHHHHHHTSCCCTTT-BC--CCHHHHCBCGGGHHHHHHHH----C-CTTCC------------
T ss_pred EEEcCCCHH-----HHHHHHHHhcCCCCCHHH-HH--HHHhhhCccHHHHHHHHHHH----H-hCCCC------------
Confidence 999966543 234444443 42111111 11 12245699987764433321 1 11100
Q ss_pred ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 838 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 838 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+....++.+||.|-+-+.++|+
T Consensus 369 ---------------------~Gd~vll~gfG~G~t~~~~ll~ 390 (392)
T 3led_A 369 ---------------------QGDLGLICSFGAGYSAGTVFVQ 390 (392)
T ss_dssp ---------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCEEEEEEEChhhEeEEEEEE
Confidence 0134578899999999999987
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-12 Score=147.23 Aligned_cols=158 Identities=20% Similarity=0.132 Sum_probs=115.5
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+++|||||+|+||.++++.|+++|..++++.++... .+.+...+...+. .+.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 689999999999999999999999866665554332 1111112222233 6889999999999999888765
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-------- 214 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-------- 214 (1005)
++|+|||+||... . ..+.++++..+++|+.|+.++.+++.+...+ ..+.++||++||.+.+-+
T Consensus 106 --~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~--~~~~~~~v~~SS~~vyg~~~~~~~E~ 176 (381)
T 1n7h_A 106 --KPDEVYNLAAQSH-V----AVSFEIPDYTADVVATGALRLLEAVRSHTID--SGRTVKYYQAGSSEMFGSTPPPQSET 176 (381)
T ss_dssp --CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHH--HCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred --CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCc--cCCccEEEEeCcHHHhCCCCCCCCCC
Confidence 6999999999754 2 1235668889999999999999998876422 122458999999764321
Q ss_pred --CCCChhhhHHHHHHHHHHHHHHhc
Q psy612 215 --DFGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 215 --~~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
......|+.+|.+.+.+++....+
T Consensus 177 ~~~~~~~~Y~~sK~~~E~~~~~~~~~ 202 (381)
T 1n7h_A 177 TPFHPRSPYAASKCAAHWYTVNYREA 202 (381)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 234678999999999999877654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=146.94 Aligned_cols=156 Identities=16% Similarity=0.111 Sum_probs=113.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+++|||||+|+||.++++.|+++|..++++.++... .+.+.+.+.. .+..+.++.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 689999999999999999999999866666554332 1111111110 2346888999999999999888765
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
++|+||||||... .. .+.++++..+++|+.|+.++.+++.+.. ..+.++||++||.+.+-+.
T Consensus 102 --~~d~vih~A~~~~-~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~E 170 (375)
T 1t2a_A 102 --KPTEIYNLGAQSH-VK----ISFDLAEYTADVDGVGTLRLLDAVKTCG----LINSVKFYQASTSELYGKVQEIPQKE 170 (375)
T ss_dssp --CCSEEEECCSCCC-HH----HHHHSHHHHHHHHTHHHHHHHHHHHHTT----CTTTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred --CCCEEEECCCccc-cc----ccccCHHHHHHHHHHHHHHHHHHHHHhC----CCccceEEEecchhhhCCCCCCCCCc
Confidence 6999999999754 21 1346678899999999999999975431 1112689999998764321
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhc
Q psy612 216 ----FGSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 216 ----~g~~~Yaaana~l~~la~~~~~~ 238 (1005)
.....|+.+|.+++.+++..+.+
T Consensus 171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 197 (375)
T 1t2a_A 171 TTPFYPRSPYGAAKLYAYWIVVNFREA 197 (375)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 23568999999999999887654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=146.97 Aligned_cols=152 Identities=17% Similarity=0.113 Sum_probs=114.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCC------cEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga------~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
.++++|||||+|+||..+++.|+++|. ..|+++.|+. .... ..+.++.++.+|++|++++.++++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~-- 84 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE-- 84 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh--
Confidence 567899999999999999999999993 3444444543 2111 134578899999999998887775
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-C--
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F-- 216 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-~-- 216 (1005)
+++|+|||+||... . .+.++++..+++|+.|+.++.+++.+..++ ....++||++||++.+-+. +
T Consensus 85 ----~~~d~vih~A~~~~-~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~--~~~~~~iv~~SS~~~~~~~~~~~ 152 (342)
T 2hrz_A 85 ----ARPDVIFHLAAIVS-G-----EAELDFDKGYRINLDGTRYLFDAIRIANGK--DGYKPRVVFTSSIAVFGAPLPYP 152 (342)
T ss_dssp ----TCCSEEEECCCCCH-H-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHH--HCCCCEEEEEEEGGGCCSSCCSS
T ss_pred ----cCCCEEEECCccCc-c-----cccccHHHHHHHHHHHHHHHHHHHHhcccc--cCCCcEEEEeCchHhhCCCCCCC
Confidence 47999999999753 2 235678899999999999999987654211 1125689999998654322 2
Q ss_pred --------CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 --------GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 --------g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+++|.+.+.+++....+
T Consensus 153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 182 (342)
T 2hrz_A 153 IPDEFHTTPLTSYGTQKAICELLLSDYSRR 182 (342)
T ss_dssp BCTTCCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 5678999999999999887655
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-12 Score=146.10 Aligned_cols=166 Identities=18% Similarity=0.155 Sum_probs=119.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCC---chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSK---LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~---~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+.++|||||+|+||.++++.|+++| ...|+.+.|.. ..+. .+.+. .+.++.++.+|++|.+++.+++
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------- 73 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE-DDPRYTFVKGDVADYELVKELV------- 73 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT-TCTTEEEEECCTTCHHHHHHHH-------
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc-cCCceEEEEcCCCCHHHHHHHh-------
Confidence 3579999999999999999999997 23455444432 1111 11121 1457889999999999888776
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------- 213 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~---------- 213 (1005)
+++|+||||||... . +.+.++++..+++|+.|+.++.+++.+. ...++||++||.+.+-
T Consensus 74 ~~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------~~~~~iv~~SS~~vyg~~~~~~~~E~ 142 (336)
T 2hun_A 74 RKVDGVVHLAAESH-V----DRSISSPEIFLHSNVIGTYTLLESIRRE------NPEVRFVHVSTDEVYGDILKGSFTEN 142 (336)
T ss_dssp HTCSEEEECCCCCC-H----HHHHHCTHHHHHHHHHHHHHHHHHHHHH------CTTSEEEEEEEGGGGCCCSSSCBCTT
T ss_pred hCCCEEEECCCCcC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh------CCCcEEEEeccHHHHCCCCCCCcCCC
Confidence 36999999999754 1 1234567889999999999999997653 1236899999975321
Q ss_pred -CCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 214 -GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 214 -g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+......|+++|.+.+.+++..+.+. +.+++.+.++...+
T Consensus 143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~v~g 183 (336)
T 2hun_A 143 DRLMPSSPYSATKAASDMLVLGWTRTY-----NLNASITRCTNNYG 183 (336)
T ss_dssp BCCCCCSHHHHHHHHHHHHHHHHHHHT-----TCEEEEEEECEEES
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHh-----CCCEEEEeeeeeeC
Confidence 22345789999999999998776541 23778887765543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.6e-12 Score=147.33 Aligned_cols=171 Identities=18% Similarity=0.161 Sum_probs=121.1
Q ss_pred EEEEECChhHHHHHHHHHHHHc-CCcEEEEecCC--CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 70 TYLITGGTGRLGMLFSDYLINK-YSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|||||+|+||.++++.|+++ |.+++++.++. ...+.+ ..+.. +.++.++.+|++|.+++.+++++ +++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQ-----YQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhh-----cCC
Confidence 4899999999999999999998 56544444332 111111 11211 45788999999999999888865 279
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh--cCCCcEEEEecCcccc--cC--------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFVCYFSSSSAI--LG-------- 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~--~~~~~~iV~~SSia~~--~g-------- 214 (1005)
|+||||||... . +.+.++++..+++|+.|+.++.+++.+.|+..+ ....++||++||.+.+ .+
T Consensus 75 d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 75 DAVMHLAAESH-V----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp SEEEECCSCCC-H----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CEEEECCCCcC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 99999999754 1 224456788999999999999999988753110 0012489999997532 11
Q ss_pred -----------CCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 215 -----------DFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 215 -----------~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
......|+++|.+++.+++..+.+ ++ +++.+.++...+
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi------~~~~vrp~~v~G 199 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGL------PTIVTNCSNNYG 199 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEES
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCC------cEEEEeeceeEC
Confidence 134578999999999999887654 33 777887765543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.40 E-value=6e-13 Score=151.23 Aligned_cols=162 Identities=18% Similarity=0.146 Sum_probs=114.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHH--cCCcEEEEecCCCchHHH-------HHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLIN--KYSTNLILSGRSKLNSII-------YKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~--~Ga~~vil~~r~~~~~~~-------~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
.++++|||||+|+||+++++.|++ +|.+++++.++....... .......+..+.++.+|++|++++.++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-- 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-- 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh--
Confidence 468999999999999999999999 888766665543311000 000111244678899999999988776
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
...++|+||||||... . +.++++..+++|+.|+.++.+++.. .... ||++||.+ .+|...
T Consensus 87 ----~~~~~D~vih~A~~~~-~------~~~~~~~~~~~Nv~gt~~ll~aa~~-------~~~~-~V~~SS~~-vyg~~~ 146 (362)
T 3sxp_A 87 ----EKLHFDYLFHQAAVSD-T------TMLNQELVMKTNYQAFLNLLEIARS-------KKAK-VIYASSAG-VYGNTK 146 (362)
T ss_dssp ----TTSCCSEEEECCCCCG-G------GCCCHHHHHHHHTHHHHHHHHHHHH-------TTCE-EEEEEEGG-GGCSCC
T ss_pred ----hccCCCEEEECCccCC-c------cccCHHHHHHHHHHHHHHHHHHHHH-------cCCc-EEEeCcHH-HhCCCC
Confidence 3458999999999654 2 3345788999999999999999632 2333 99999954 344322
Q ss_pred -----------ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 218 -----------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 218 -----------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
...|+.+|.+.+.+++....+ + +++.|..+..-
T Consensus 147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~------~~~~lR~~~v~ 190 (362)
T 3sxp_A 147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-N------VQVGLRYFNVY 190 (362)
T ss_dssp SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-S------CEEEEEECSEE
T ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-C------CEEEEEeCcee
Confidence 345999999999999877654 3 55666654443
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.2e-12 Score=143.80 Aligned_cols=247 Identities=15% Similarity=0.166 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
..|+.+++.+||++||+++++++ .|++|+...++. . ...+.+++..+|++. |++.|..+|+|
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId----~vi~~t~~~~~~--------~-----p~~a~~v~~~lGl~~~~~~~v~~aC~s 137 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDID----LLLVNTLSPDHH--------D-----PSQACLIQPLLGLRHIPVLDIRAQASG 137 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCSSS--------B-----SCHHHHHHHHHTCCSCCEEEEECGGGH
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEeCCCCCC--------C-----CcHHHHHHHHcCCCCCcEEEECCHhHH
Confidence 57899999999999999988876 788887654321 1 125778999999974 89999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||..|+..|++|.++.+||+|++.+... +.++... ....+.+|+|++++||++-+. ++
T Consensus 138 ~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-----------~~~~d~~-----~~t~~lfGDGAaA~vl~~~~~---~~ 198 (359)
T 3h78_A 138 LLYGLQMARGQILAGLARHVLVVCGEVLSKR-----------MDCSDRG-----RNLSILLGDGAGAVVVSAGES---LE 198 (359)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEECGGG-----------CCCSTTT-----HHHHTTBCEEEEEEEEECCSC---SS
T ss_pred HHHHHHHHHHHHHCCCcCEEEEEEEchhccc-----------CCccccc-----ccccceecceeEEEEEEecCC---CC
Confidence 9999999999999999999999999974221 1111100 113467899999999986432 13
Q ss_pred CceEEEEEEeeec------cC--CCCC-C------------CCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy612 710 DPIHAIIRGSGIN------YD--GKTN-G------------ITAPN--------GISQTELIKSVYKKSNLNPEDINYII 760 (1005)
Q Consensus 710 ~~I~avI~g~~~~------~d--G~~~-~------------~~~p~--------~~~q~~~i~~al~~agi~~~~I~yve 760 (1005)
..|.+...++.-. -. |... . +..-+ .....++++++|+++|++++||+++-
T Consensus 199 ~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v 278 (359)
T 3h78_A 199 DGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVI 278 (359)
T ss_dssp SEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455433332111 00 1100 0 00001 12345678999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccC
Q psy612 761 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 840 (1005)
Q Consensus 761 ~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~ 840 (1005)
.|-.+.++ ++++.+.++-... .+.. .+ ..+||+.+|+=...|..++- . +.
T Consensus 279 ~Hq~n~~i-----~~~~~~~lgl~~e---k~~~-~l-~~~GNt~sAsi~l~L~~~~~---~--l~--------------- 328 (359)
T 3h78_A 279 CHQPNLRI-----LDAVQEQLGIPQH---KFAV-TV-DRLGNMASASTPVTLAMFWP---D--IQ--------------- 328 (359)
T ss_dssp ECCSCHHH-----HHHHHHHHTCCGG---GBCC-CH-HHHCBCGGGHHHHHHHHHGG---G--SC---------------
T ss_pred ECCCCHHH-----HHHHHHHhCcCHH---Hhhh-hh-hcccchHHHHHHHHHHHHHH---h--CC---------------
Confidence 99766543 4566666653221 1222 22 35699999986665544321 1 10
Q ss_pred CCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 841 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 841 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+....++.+||.|-+-+.++|+=
T Consensus 329 ------------------~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 329 ------------------PGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp ------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ------------------CCCEEEEEEEchhhhheeeeEEe
Confidence 01234678899999999999983
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=135.58 Aligned_cols=186 Identities=12% Similarity=0.063 Sum_probs=118.4
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|+||+++++.|+++|.+++++.++.+.. ..+. ..+.++.+|++|+++ +.+..+|.|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~---~~~~~~~~D~~d~~~---------~~~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI----TQTH---KDINILQKDIFDLTL---------SDLSDQNVV 65 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH----HHHC---SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh----hhcc---CCCeEEeccccChhh---------hhhcCCCEE
Confidence 489999999999999999999997655554443221 2221 457889999999876 233579999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC------------
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------------ 217 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g------------ 217 (1005)
|||||... . ....++.++.++.++ +++...++||++||..++.+.++
T Consensus 66 i~~ag~~~-~-------------~~~~~~~~~~~l~~a-------~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~ 124 (221)
T 3ew7_A 66 VDAYGISP-D-------------EAEKHVTSLDHLISV-------LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE 124 (221)
T ss_dssp EECCCSST-T-------------TTTSHHHHHHHHHHH-------HCSCCSSEEEEECCCC-------------------
T ss_pred EECCcCCc-c-------------ccchHHHHHHHHHHH-------HHhcCCceEEEEecceEEEcCCCCccccccCCCCC
Confidence 99999854 2 134577777777776 45555789999999988776554
Q ss_pred ChhhhHHHHHHHHHHHHHH-hccccccCCceEEEEeCCcccCcccccccch--hhhHHHHhcCCCCCCHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSKQKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g~~~l~~~~~~~~l~~~l 294 (1005)
...|+.+|...+.+...+. ..++ +++.|.++.+.+.+.....-. .........+...+..++.++++..++
T Consensus 125 ~~~y~~~k~~~e~~~~~~~~~~gi------~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 198 (221)
T 3ew7_A 125 APYYPTARAQAKQLEHLKSHQAEF------SWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEI 198 (221)
T ss_dssp CCCSCCHHHHHHHHHHHHTTTTTS------CEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCc------cEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHH
Confidence 3559999999998854333 4444 888898887754322111000 000011123345788999999999988
Q ss_pred hccc
Q psy612 295 IQDK 298 (1005)
Q Consensus 295 ~~~~ 298 (1005)
..+.
T Consensus 199 ~~~~ 202 (221)
T 3ew7_A 199 ERPN 202 (221)
T ss_dssp HSCS
T ss_pred hCcc
Confidence 7664
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.8e-12 Score=140.91 Aligned_cols=160 Identities=14% Similarity=0.203 Sum_probs=118.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+|+||..+++.|+++|..++++.++..... + .....+.++.+|++|.+++.++++. +++|.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~ 70 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA 70 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence 57999999999999999999999976666554332211 1 1122577899999999998888765 37999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------ 216 (1005)
|||+||... .. .+.++++..+++|+.|+.++.+++. +...++||++||.+.+ +..
T Consensus 71 vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~-------~~~~~~~v~~Ss~~~~-~~~~~~~~~E~~~~~ 137 (330)
T 2c20_A 71 VMHFAADSL-VG----VSMEKPLQYYNNNVYGALCLLEVMD-------EFKVDKFIFSSTAATY-GEVDVDLITEETMTN 137 (330)
T ss_dssp EEECCCCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEECCGGGG-CSCSSSSBCTTSCCC
T ss_pred EEECCcccC-cc----ccccCHHHHHHHHhHHHHHHHHHHH-------HcCCCEEEEeCCceee-CCCCCCCCCcCCCCC
Confidence 999999754 21 1345678899999999999999853 2345789999997653 322
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|.+.+.+++....+. +.+++.+..+..-
T Consensus 138 ~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~v~ 173 (330)
T 2c20_A 138 PTNTYGETKLAIEKMLHWYSQAS-----NLRYKIFRYFNVA 173 (330)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTS-----SCEEEEEECSEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEecCccc
Confidence 35789999999999998876541 2377777765543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.7e-12 Score=142.26 Aligned_cols=166 Identities=18% Similarity=0.158 Sum_probs=116.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+++++|||||+|+||..+++.|+++|..++++.++.+...+. ..+.... .++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIK------ 76 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence 468899999999999999999999998766555544332222 2222221 358889999999988776663
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
.+|+|||+|+... . ...+ ..+..+++|+.|+.++.+++.+. ...++||++||.+++.+.+
T Consensus 77 -~~d~Vih~A~~~~-~---~~~~--~~~~~~~~nv~gt~~ll~a~~~~------~~~~riV~~SS~~~~~~~~~~~~~~~ 143 (337)
T 2c29_D 77 -GCTGVFHVATPMD-F---ESKD--PENEVIKPTIEGMLGIMKSCAAA------KTVRRLVFTSSAGTVNIQEHQLPVYD 143 (337)
T ss_dssp -TCSEEEECCCCCC-S---SCSS--HHHHTHHHHHHHHHHHHHHHHHH------SCCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred -CCCEEEEeccccC-C---CCCC--hHHHHHHHHHHHHHHHHHHHHhC------CCccEEEEeeeHhhcccCCCCCcccC
Confidence 4799999998542 1 1122 23568899999999999987543 1257899999988665432
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 217 ---------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ---------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+++|.+.+.++..... .++ +++.+.++...+
T Consensus 144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~~lrp~~v~G 195 (337)
T 2c29_D 144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNI------DFITIIPTLVVG 195 (337)
T ss_dssp TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTC------CEEEEEECEEES
T ss_pred cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceEC
Confidence 234699999999998876543 344 777777665543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.2e-12 Score=143.71 Aligned_cols=165 Identities=19% Similarity=0.188 Sum_probs=111.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC---CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~---g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+|++|||||+|+||+++++.|+++|..++++.+++.........+... +.++.++.+|++|++++.++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence 578999999999999999999999987665554232110001112221 1357888999999988877664
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS------ 218 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~------ 218 (1005)
.+|+|||+|+... .. ..+.+++.+++|+.|+.++.+++.+ ....++||++||.++..+.+..
T Consensus 74 ~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~l~~aa~~------~~~~~~iV~~SS~~~~~~~~~~~~~~~e 141 (322)
T 2p4h_X 74 GCVGIFHTASPID----FA--VSEPEEIVTKRTVDGALGILKACVN------SKTVKRFIYTSSGSAVSFNGKDKDVLDE 141 (322)
T ss_dssp TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTT------CSSCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred CCCEEEEcCCccc----CC--CCChHHHHHHHHHHHHHHHHHHHHh------cCCccEEEEeccHHHcccCCCCCeecCC
Confidence 4799999996321 11 1122456899999999999998532 1145789999999866543211
Q ss_pred ----------------hhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCccc
Q psy612 219 ----------------CDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 219 ----------------~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~ 257 (1005)
..|+++|.+.+.++..... .++ +++.+.++...
T Consensus 142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi------~~~~lrp~~v~ 191 (322)
T 2p4h_X 142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI------DVVTLILPFIV 191 (322)
T ss_dssp TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTC------CEEEEEECEEE
T ss_pred ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCC------cEEEEcCCceE
Confidence 1699999999988876543 344 77777766553
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=145.40 Aligned_cols=157 Identities=15% Similarity=0.140 Sum_probs=117.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+|+||+++++.|+++| .++++.+++....+ .....+.++.+|++| +++.++++ .+|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~------~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~ 66 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE------FVNEAARLVKADLAA-DDIKDYLK-------GAEE 66 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG------GSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh------hcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence 469999999999999999999999 66777666543221 124568899999999 77776653 6999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------CCCC
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-----------GDFG 217 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-----------g~~g 217 (1005)
|||+|+... .+.+.++++..+++|+.|+.++.+++.. ...++||++||.+.+- +...
T Consensus 67 vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~-------~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~ 134 (313)
T 3ehe_A 67 VWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK-------AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHP 134 (313)
T ss_dssp EEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred EEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence 999998643 2334556788999999999999998532 2457899999976542 2234
Q ss_pred ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 218 SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|.+.+.+++....+ ++ +++.+..+..-+
T Consensus 135 ~~~Y~~sK~~~e~~~~~~~~~~g~------~~~ilRp~~v~G 170 (313)
T 3ehe_A 135 ISLYGASKLACEALIESYCHTFDM------QAWIYRFANVIG 170 (313)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTC------EEEEEECSCEES
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC------CEEEEeeccccC
Confidence 578999999999999887654 33 778887766544
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=144.60 Aligned_cols=159 Identities=16% Similarity=0.192 Sum_probs=116.7
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||+|+||+++++.|+++|..++++.+......+ .....+.++.+|++|++++.++++. ..+|.|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~v 70 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFRE-----FRPTHV 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHH-----HCCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence 58999999999999999999999876655432321111 1113466789999999999888764 268999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------------C
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-------------F 216 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-------------~ 216 (1005)
||+|+... . ..+.++++..+++|+.|++++.+++.. ...++||++||.++.+|. .
T Consensus 71 i~~a~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~-------~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~ 138 (311)
T 2p5y_A 71 SHQAAQAS-V----KVSVEDPVLDFEVNLLGGLNLLEACRQ-------YGVEKLVFASTGGAIYGEVPEGERAEETWPPR 138 (311)
T ss_dssp EECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred EECccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence 99998754 2 124466788999999999999998532 245789999998444432 1
Q ss_pred CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+++|.+++.+++....+ ++ +++.+.++..-
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~lrp~~v~ 174 (311)
T 2p5y_A 139 PKSPYAASKAAFEHYLSVYGQSYGL------KWVSLRYGNVY 174 (311)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHHcCC------CEEEEeecccc
Confidence 3568999999999999876543 33 77777766543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=144.27 Aligned_cols=144 Identities=16% Similarity=0.182 Sum_probs=107.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+|+||+++++.|+++|..++++.++.....+ .+... ..+.++.+|++|.+++.++++. +++
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 90 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDH-PNLTFVEGSIADHALVNQLIGD-----LQP 90 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCC-TTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhc-CCceEEEEeCCCHHHHHHHHhc-----cCC
Confidence 56899999999999999999999999766666544322111 11111 3688899999999999888865 379
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----C--------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL----G-------- 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~----g-------- 214 (1005)
|+||||||... .. +.++++ +++|+.|+.++.+++.+ ...++||++||.+.+- .
T Consensus 91 D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~-------~~~~~iV~~SS~~~~g~~~~~~~~~~~E~ 155 (333)
T 2q1w_A 91 DAVVHTAASYK-DP-----DDWYND--TLTNCVGGSNVVQAAKK-------NNVGRFVYFQTALCYGVKPIQQPVRLDHP 155 (333)
T ss_dssp SEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred cEEEECceecC-CC-----ccCChH--HHHHHHHHHHHHHHHHH-------hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence 99999999765 22 334455 99999999999999643 2457899999976542 1
Q ss_pred -CCCChhhhHHHHHHHHHHHH
Q psy612 215 -DFGSCDYAMGNRFQTVYAKY 234 (1005)
Q Consensus 215 -~~g~~~Yaaana~l~~la~~ 234 (1005)
.+....|+.+|.+++.+++.
T Consensus 156 ~~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 156 RNPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp CCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHh
Confidence 22227899999999999876
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.36 E-value=5.3e-11 Score=135.21 Aligned_cols=247 Identities=11% Similarity=0.065 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC--CCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--Gps~~v~taC 627 (1005)
...|+.+++.+||++||+++++++ .|++|+...++. . ...+.+++..+|+. .|++.|+.+|
T Consensus 80 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~--------~-----p~~a~~v~~~lGl~~~~~~~~v~~~C 142 (365)
T 3gwa_A 80 AADLAYEAARKLFAQGAVGADQVD----FVILCTQAPDYV--------L-----PTSACMLQHRLGIPTHAGALDVNLGC 142 (365)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGCC----EEEEEESSCSCS--------B-----SCHHHHHHHHTTCCTTSEEEEEECST
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C-----CcHHHHHHHHcCCCCCceEEEecccC
Confidence 457899999999999999988876 688887544321 1 12578899999997 7999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
+|++.||..|++.|++|.++.+||+|++.+... +.++. ......+|+|++++||++-+..
T Consensus 143 ~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~~~d-------r~~~~lfGDGAaA~vl~~~~~~-- 202 (365)
T 3gwa_A 143 SGYVYGLSLAKGLVETGAARCVLLLTADTYSKY-----------LHPLD-------KSVRTLFGDGASATAVIAEHGE-- 202 (365)
T ss_dssp THHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG-----------SCTTC-------HHHHTTBCCEEEEEEEEEECSS--
T ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEEEchhhcc-----------CCccc-------ccccccccceeEEEEEEecCCC--
Confidence 999999999999999999999999999974321 11111 1124579999999999864321
Q ss_pred CCCceEEEEEEee-e-------ccCCCCCCCC--------------------CCC--------HHHHHHHHHHHHHHcCC
Q psy612 708 DGDPIHAIIRGSG-I-------NYDGKTNGIT--------------------APN--------GISQTELIKSVYKKSNL 751 (1005)
Q Consensus 708 ~g~~I~avI~g~~-~-------~~dG~~~~~~--------------------~p~--------~~~q~~~i~~al~~agi 751 (1005)
...|.....++. . ..+|.....+ .-+ .....++++++|+++|+
T Consensus 203 -~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl 281 (365)
T 3gwa_A 203 -LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGE 281 (365)
T ss_dssp -SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 112433322221 1 0111110000 001 23345778999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCC
Q psy612 752 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831 (1005)
Q Consensus 752 ~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 831 (1005)
+++||+++-.|-.+.. =++++.+.++-...+ +. ..=..+||+-+|+=...|-.+ ++.+.+.|
T Consensus 282 ~~~did~~v~Hq~n~~-----i~~~~~~~Lgl~~ek---~~--~~l~~~GNtssAsipl~L~~~---~~~g~~~~----- 343 (365)
T 3gwa_A 282 PRENIDCFVLHQANRF-----MLDALRKKMKIPEHK---FP--VLMEHCGNTVSSTLPLALETM---RANGTLAR----- 343 (365)
T ss_dssp CGGGCSEEEECCCCHH-----HHHHHHHHHTCCGGG---SC--CCCTTTCBCGGGHHHHHHHHH---HHTTCCCT-----
T ss_pred CHHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHH---HH--HHHhcccchHHHHHHHHHHHH---HHcCCCCC-----
Confidence 9999999999976554 245666666532211 22 223577999988865554433 23332211
Q ss_pred CcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 832 ~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
....+..+||.|-+-+.++|+
T Consensus 344 ----------------------------Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 344 ----------------------------GMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp ----------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------------CCEEEEEEEehhheeEEEEEE
Confidence 124568899999999999886
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.7e-12 Score=145.04 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC----CCCcccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL----KGPVMAINT 625 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l----~Gps~~v~t 625 (1005)
...|+++++.+||++||++++++. .|++|+....+. ...++..++..||+ ..|++.|..
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~-------------~p~~a~~v~~~lgl~g~~~~~~~~v~~ 114 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQIG----RLEVGSETVIDK-------------SKSIKTFLMQLFEKCGNTDVEGVDSTN 114 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECCCCSCS-------------SSCHHHHHTHHHHTTTCCCCBCCEECS
T ss_pred HHHHHHHHHHHHHHHcCcCHHHCC----EEEEEecCCCCC-------------CCcHHHHHHHHhCCcCCCCceEEEhhh
Confidence 357899999999999999876543 455566543221 12357788888888 458899999
Q ss_pred cchhHHHHHHHHHHHHhcCCc--CEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccc
Q psy612 626 ACSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703 (1005)
Q Consensus 626 aCsSsl~Al~~A~~~l~~G~~--d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~ 703 (1005)
+|+|++.||..|.+.|++|.+ +.+||+|++... |+....+.+.|+|++++||++.+
T Consensus 115 aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------~~~~~~~~~fGDGA~A~ll~~~~ 172 (450)
T 2f82_A 115 ACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------YAEGPARPTGGAAAIAMLIGPDA 172 (450)
T ss_dssp GGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------CSSSTTGGGCEEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------ccCCCCCcccccceEEEEeccCC
Confidence 999999999999999999998 999999999742 11123678899999999998643
Q ss_pred hhhcCCCceEEEEEEeeecc--CCCCC----CCCCCCHH--------HHHHHHHHHHH------HcCCCCCCccEEEecC
Q psy612 704 RALSDGDPIHAIIRGSGINY--DGKTN----GITAPNGI--------SQTELIKSVYK------KSNLNPEDINYIITHG 763 (1005)
Q Consensus 704 ~A~~~g~~I~avI~g~~~~~--dG~~~----~~~~p~~~--------~q~~~i~~al~------~agi~~~~I~yve~hg 763 (1005)
. + .+.....|+...+ |.... .+...++. ...++++.+++ ++|++++||+|+-.|.
T Consensus 173 ~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq 247 (450)
T 2f82_A 173 P----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHS 247 (450)
T ss_dssp S----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECC
T ss_pred c----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCEEEecC
Confidence 2 1 2222234444332 11111 11122332 34467788886 8999999999999999
Q ss_pred CCCCCCCHHHHH
Q psy612 764 TGTKLGDPVEIN 775 (1005)
Q Consensus 764 tgt~~gD~~E~~ 775 (1005)
+++++.+.+...
T Consensus 248 ~~~~i~~~~~~~ 259 (450)
T 2f82_A 248 PYNKLVQKSFAR 259 (450)
T ss_dssp SSHHHHHHHHHH
T ss_pred ChHHHHHHHHHH
Confidence 999887766443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=7.6e-12 Score=129.63 Aligned_cols=185 Identities=14% Similarity=0.070 Sum_probs=124.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++++||||+|+||+++++.|+++|.+++++.++.+.... ....++.++.+|++|++++.++++ .+|.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~ 70 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS------EGPRPAHVVVGDVLQAADVDKTVA-------GQDA 70 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS------SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc------ccCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence 689999999999999999999999755555443322111 013467889999999988877663 4799
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----CChhhhHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----GSCDYAMG 224 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----g~~~Yaaa 224 (1005)
|||+||... . .+. .++|+.++.++.+++.. ...++||++||.......+ ....|+.+
T Consensus 71 vi~~a~~~~-~---~~~--------~~~n~~~~~~~~~~~~~-------~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~ 131 (206)
T 1hdo_A 71 VIVLLGTRN-D---LSP--------TTVMSEGARNIVAAMKA-------HGVDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (206)
T ss_dssp EEECCCCTT-C---CSC--------CCHHHHHHHHHHHHHHH-------HTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred EEECccCCC-C---CCc--------cchHHHHHHHHHHHHHH-------hCCCeEEEEeeeeeccCcccccccchhHHHH
Confidence 999999765 2 111 13778888888887543 2457899999986554433 56789999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
|..++.+.+ ..++ +++.+.++.+.+..+........ ....+...+.+++..+.+..++..+
T Consensus 132 K~~~e~~~~---~~~i------~~~~lrp~~~~~~~~~~~~~~~~---~~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 132 HIRMHKVLR---ESGL------KYVAVMPPHIGDQPLTGAYTVTL---DGRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHH---HTCS------EEEEECCSEEECCCCCSCCEEES---SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHH---hCCC------CEEEEeCCcccCCCCCcceEecc---cCCCCCCccCHHHHHHHHHHHhcCc
Confidence 999998874 2344 78888877663222111000000 0001124677888888888877654
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-11 Score=139.44 Aligned_cols=247 Identities=14% Similarity=0.105 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~taC 627 (1005)
...|..+++.+||++||++++++. .|++|+...++.. ...+.+++..+|+ +.|.+.|..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id----~vi~~t~~~~~~~-------------p~~a~~v~~~lGl~~~~~~~~v~~aC 128 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID----ALIFVSQTPNYRL-------------PATAFVLQAELDLPASCLALDINLGC 128 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCSS-------------SCHHHHHHHHTTCCTTSEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------CcHHHHHHHHcCcCCCccEEeeCccc
Confidence 357899999999999999988876 7888876543211 1357889999999 47999999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
+|++.||..|++.|++|.++.+||+|++.+... +.++. .......|+|++++||++-+..
T Consensus 129 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~~~d-------~~~~~lfGDGA~A~vl~~~~~~-- 188 (354)
T 4efi_A 129 SGYPQALWLGMNLIQTGAAKRVLLAVGDTISKM-----------IDPTD-------RSTSLLFGDAGTMTALETSNGD-- 188 (354)
T ss_dssp THHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG-----------CCTTC-------HHHHTTBCCEEEEEEEEECCSC--
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------CCccc-------cccccccccceeEEEEeecCCC--
Confidence 999999999999999999999999999974211 11111 1225678999999999864321
Q ss_pred CCCceEEEEEEeeec-------cCCCC--------------CCCCCCC--------HHHHHHHHHHHHHHcCCCCCCccE
Q psy612 708 DGDPIHAIIRGSGIN-------YDGKT--------------NGITAPN--------GISQTELIKSVYKKSNLNPEDINY 758 (1005)
Q Consensus 708 ~g~~I~avI~g~~~~-------~dG~~--------------~~~~~p~--------~~~q~~~i~~al~~agi~~~~I~y 758 (1005)
..+...+...+.. .+|.. .....-+ .....++++++|+++|++++||++
T Consensus 189 --~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~ 266 (354)
T 4efi_A 189 --AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSYDA 266 (354)
T ss_dssp --CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSE
T ss_pred --CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 1121222211110 11110 0000011 133456789999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII 838 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~ 838 (1005)
+-.|-.+.++ ++++.+.++-...+ +. ..-..+||+.+|+=...|..++ +.+.+.
T Consensus 267 ~v~Hq~~~~i-----~~~~~~~Lgl~~ek---~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~------------- 320 (354)
T 4efi_A 267 FLFHQANLFM-----LKHLAKKAGLPAER---VP--VNIGEYGNTSCASIPLLITTEL---KDRLKE------------- 320 (354)
T ss_dssp EEECCCCHHH-----HHHHHHHTTCCGGG---SC--CCHHHHCBCGGGHHHHHHHHHS---HHHHHH-------------
T ss_pred EEeCCCCHHH-----HHHHHHHhCcCHHH---HH--HHHhhhCcHHHHHHHHHHHHHH---HhCCCC-------------
Confidence 9999766542 45566666432211 11 1225679999988665554432 221110
Q ss_pred cCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 839 LKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 839 ~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
+....++.+||.|-+-+.++|+-
T Consensus 321 --------------------~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 321 --------------------ETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp --------------------SCEEEEEEEEETTTEEEEEEEEE
T ss_pred --------------------CCCEEEEEEEchhhhheeeEEEE
Confidence 11345788999999999999984
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.34 E-value=7.1e-12 Score=141.23 Aligned_cols=168 Identities=14% Similarity=0.170 Sum_probs=116.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++|||||+|+||..+++.|+++|.. .|+...|..... ....++.. ...+.++.+|++|.+++.++++..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 97 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG-NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER---- 97 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC-CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc-chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc----
Confidence 5678999999999999999999999943 333333332110 01112221 247899999999999999888763
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
++|+|||+||... . ..+.++++..+++|+.|+.++.+++.. ....+||++||.+.+-...
T Consensus 98 -~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~-------~~~~~~v~~SS~~vy~~~~~~~~~~E 164 (346)
T 4egb_A 98 -DVQVIVNFAAESH-V----DRSIENPIPFYDTNVIGTVTLLELVKK-------YPHIKLVQVSTDEVYGSLGKTGRFTE 164 (346)
T ss_dssp -TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHH-------STTSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred -CCCEEEECCcccc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeCchHHhCCCCcCCCcCC
Confidence 6999999999765 2 124466788999999999999998532 3567899999975433221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|...+.+++....+ ++ +++.+..+..-+
T Consensus 165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilRp~~v~G 206 (346)
T 4egb_A 165 ETPLAPNSPYSSSKASADMIALAYYKTYQL------PVIVTRCSNNYG 206 (346)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEES
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeecceeC
Confidence 1378999999999999877654 44 677777665543
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.1e-12 Score=146.66 Aligned_cols=274 Identities=14% Similarity=0.098 Sum_probs=174.5
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCC
Q psy612 540 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP 619 (1005)
Q Consensus 540 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gp 619 (1005)
..+....++....|..+++.+||++||++++++. .|++++..+ +. . ...+.++...+|+.+.
T Consensus 92 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~t~-~~--------~-----p~~a~~v~~~LGl~~~ 153 (393)
T 3ov2_A 92 DDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT----HLVFCSISG-ID--------M-----PGADYRLATLLGLPLT 153 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CC--------B-----SCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-CC--------C-----CCHHHHHHHHcCCCCC
Confidence 3444455566788999999999999999988876 688887654 21 1 1367889999999985
Q ss_pred ---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEE
Q psy612 620 ---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 696 (1005)
Q Consensus 620 ---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~ 696 (1005)
.+.+..+|+|++.||..|...|++|.++.+||+|++.+.. .+..++.+ .++.....+.+|+|+++
T Consensus 154 ~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d~--~~~~~~~~~lFGDGAaA 221 (393)
T 3ov2_A 154 VNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SFRGPNEG--DFEALAGQAGFGDGAGA 221 (393)
T ss_dssp SEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TCCCCCTT--CHHHHHHHHHBCCEEEE
T ss_pred cceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hccCCccc--chhhhcccccccCccEE
Confidence 6899999999999999999999999999999999997421 12222211 11111246779999999
Q ss_pred EEEcccchhhcCCCceEEEEEEeeeccCC-CC--------CC---CCCCCHH-----HHHHHHHHHHHHcCCCC-CCccE
Q psy612 697 VVLKRLSRALSDGDPIHAIIRGSGINYDG-KT--------NG---ITAPNGI-----SQTELIKSVYKKSNLNP-EDINY 758 (1005)
Q Consensus 697 vvLk~l~~A~~~g~~I~avI~g~~~~~dG-~~--------~~---~~~p~~~-----~q~~~i~~al~~agi~~-~~I~y 758 (1005)
+||++-+..- -.+.++-.+........+ .. .+ ...+... ...++++++|+++|+++ +|| +
T Consensus 222 ~vl~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~ 299 (393)
T 3ov2_A 222 VVVGADPLEG-IEKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-F 299 (393)
T ss_dssp EEEESSCCTT-TCCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-E
T ss_pred EEEEecCCCc-ccCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-E
Confidence 9998644321 112334333322211111 00 00 0012221 23468999999999997 888 8
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHH-hhcCCCCCCCCCCCcccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQS-IKYKIIPASLHCEKENNY 836 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~-l~~~~ipp~~~~~~~n~~ 836 (1005)
+-.|=.+.. =++++.+.++-...+ +... .+=..+||+-+|+=...|-.++-. ++.|.+.|-
T Consensus 300 ~v~Hq~n~~-----i~~~v~~~Lgl~~ek---~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G--------- 362 (393)
T 3ov2_A 300 WVAHPGNWA-----IIDAIEAKLQLSPDK---LSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTG--------- 362 (393)
T ss_dssp EEECCCCHH-----HHHHHHHHHTCCTTT---THHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTT---------
T ss_pred EEECCCChH-----HHHHHHHHcCCCHHH---HHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCC---------
Confidence 888855433 345666666532211 1111 012346999999876666554432 222322210
Q ss_pred cccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 837 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 837 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
++.......+||.|-+-..++|+..+
T Consensus 363 ---------------------~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (393)
T 3ov2_A 363 ---------------------DGLQWGVLLGFGPGLSIETVVLRSMP 388 (393)
T ss_dssp ---------------------TTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred ---------------------CCCCeEEEEEECccceeeeeeeEEcc
Confidence 01134578899999999999999654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=7.5e-12 Score=143.21 Aligned_cols=163 Identities=12% Similarity=0.021 Sum_probs=118.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
..+++|||||+|+||..+++.|+++|.+++++.++...... + ....+.++.+|++|.+++.++++ .+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~ 94 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT----E--DMFCDEFHLVDLRVMENCLKVTE-------GV 94 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC----G--GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh----h--ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence 45789999999999999999999999866655544332111 0 12356788999999998887763 69
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 214 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------ 214 (1005)
|.|||+||... ...+. .++++..+++|+.|+.++.+++.. ...++||++||.+.+-.
T Consensus 95 d~Vih~A~~~~-~~~~~---~~~~~~~~~~Nv~g~~~ll~a~~~-------~~~~~~V~~SS~~v~~~~~~~~~~~~~~~ 163 (379)
T 2c5a_A 95 DHVFNLAADMG-GMGFI---QSNHSVIMYNNTMISFNMIEAARI-------NGIKRFFYASSACIYPEFKQLETTNVSLK 163 (379)
T ss_dssp SEEEECCCCCC-CHHHH---TTCHHHHHHHHHHHHHHHHHHHHH-------TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred CEEEECceecC-ccccc---ccCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence 99999999754 22221 245778899999999999998632 34578999999764321
Q ss_pred ------CCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccCc
Q psy612 215 ------DFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 215 ------~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~ 259 (1005)
......|+.+|.+.+.+++....+ ++ +++.|..+.+-+.
T Consensus 164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilrp~~v~G~ 209 (379)
T 2c5a_A 164 ESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI------ECRIGRFHNIYGP 209 (379)
T ss_dssp GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCEECT
T ss_pred cccCCCCCCCChhHHHHHHHHHHHHHHHHHHCC------CEEEEEeCceeCc
Confidence 123568999999999999876543 43 7788877665443
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=9.6e-11 Score=130.76 Aligned_cols=246 Identities=15% Similarity=0.130 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCC-CCcccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-Gps~~v~taCs 628 (1005)
...|+.+++.+||++||++++++. .|++|+...++. . ...+.+++..+|++ .|++.|+.+|+
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~~~~--------~-----p~~a~~v~~~lGl~~~~~~~v~~aC~ 114 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID----FILVATVTPDFN--------M-----PSVACQVQGAIGATEAFAFDISAACS 114 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS--------S-----SCHHHHHHHHTTCTTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcC--------C-----CcHHHHHHHHcCCCCceEEEeCcccH
Confidence 568999999999999999988776 788887553321 1 12578899999997 69999999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcC
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 708 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~ 708 (1005)
|++.||..|+..|++|.++.+||+|++.+. .. +.++ .......+|+|++++||++-+.
T Consensus 115 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~~~~-------dr~~~~lfGDGA~A~vl~~~~~---- 172 (321)
T 3il6_A 115 GFVYALSMAEKLVLSGRYQTGLVIGGETFS-KM----------LDWT-------DRSTAVLFGDGAAGVLIEAAET---- 172 (321)
T ss_dssp HHHHHHHHHHHHHHTSSCCCEEEEEEECGG-GG----------SCTT-------CTTTGGGBCCEEEEEEEEEESS----
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------CCcc-------ccccceeeccccEEEEEEEcCC----
Confidence 999999999999999999999999999742 11 1111 1224578899999999987442
Q ss_pred CCceEEEEEEe-e-----eccC--CCCCCC----------CCCCHHHH----HHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy612 709 GDPIHAIIRGS-G-----INYD--GKTNGI----------TAPNGISQ----TELIKSVYKKSNLNPEDINYIITHGTGT 766 (1005)
Q Consensus 709 g~~I~avI~g~-~-----~~~d--G~~~~~----------~~p~~~~q----~~~i~~al~~agi~~~~I~yve~hgtgt 766 (1005)
..|.....++ + +... |..... ..-++... .+.+.++++++ +.++||+++-.|-.+.
T Consensus 173 -~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~Hq~~~ 250 (321)
T 3il6_A 173 -PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLLHQANV 250 (321)
T ss_dssp -CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEECCSCH
T ss_pred -CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEEcCCCH
Confidence 2354433322 1 1001 111111 11112111 12233333332 2389999999996654
Q ss_pred CCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeee
Q psy612 767 KLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYI 846 (1005)
Q Consensus 767 ~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v 846 (1005)
. =++++.+.++-...+ +. .+=..+||+-+|+=...|-.+ ++.+.+.|
T Consensus 251 ~-----i~~~~~~~lgl~~ek---~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~~-------------------- 297 (321)
T 3il6_A 251 R-----IIDKIARKTKISREK---FL--TNMDKYGNTSAASIPILLDEA---VENGTLIL-------------------- 297 (321)
T ss_dssp H-----HHHHHHHHHTCCGGG---BC--CCGGGTCBCGGGHHHHHHHHH---HHTTSSCT--------------------
T ss_pred H-----HHHHHHHHcCcCHHH---hh--hhHhhcccHHHHHHHHHHHHH---HHhCCCCC--------------------
Confidence 4 345666666532211 22 133567999998866555443 33333221
Q ss_pred ccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 847 NKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 847 ~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+.....+..+||.|-+-+.++|+
T Consensus 298 -----------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 298 -----------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp -----------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred -----------CCCCEEEEEEEehhheeEEEEEE
Confidence 00124568899999999999886
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-11 Score=138.04 Aligned_cols=246 Identities=13% Similarity=0.089 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccc
Q psy612 549 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTAC 627 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taC 627 (1005)
....|+.+++.+||++||+++++++ .|++|+..... +. . ...+.++...+|+.+ |.+.|+.+|
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~~~~~------~d-~-----~~~a~~v~~~lG~~~~~~~~v~~aC 116 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS----LVLHSSLWFQG------ID-L-----WPAASYVAHEAVGRHVPAFGLAQRC 116 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSSCCS------SS-S-----SCHHHHHHHHHTCSSSCEEEEECGG
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------cc-c-----ccHHHHHHHHhCCCCCcEEEEcCcc
Confidence 3567899999999999999887765 56777642100 00 0 024778888999975 899999999
Q ss_pred hhHHHHHHHHHHHHhcCCcC--EEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchh
Q psy612 628 SSSLVATHIACQSLRQHECD--TAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRA 705 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d--~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A 705 (1005)
+|++.||..|...|++|.++ .+||+|++.+..+. + ..|+. +..+++|+|++++||++-+.
T Consensus 117 ~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~------~~~~~-~~~~lfGDGA~A~vl~~~~~- 178 (357)
T 3s3l_A 117 NGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------I------DRWNS-VDVTMYGDGAAALVLSTRDG- 178 (357)
T ss_dssp GHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------C------CTTTS-SSSCCBCCEEEEEEEESSCC-
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------c------ccccc-cCCcccccccEEEEEecCCC-
Confidence 99999999999999999999 99999999753210 1 11222 25788999999999986431
Q ss_pred hcCCCceEEEEEEeeeccCCCC------C-CCCCC--------C--H-------------------HHHHHHHHHHHHHc
Q psy612 706 LSDGDPIHAIIRGSGINYDGKT------N-GITAP--------N--G-------------------ISQTELIKSVYKKS 749 (1005)
Q Consensus 706 ~~~g~~I~avI~g~~~~~dG~~------~-~~~~p--------~--~-------------------~~q~~~i~~al~~a 749 (1005)
+.+|.+. ....||.. . ....| . + ....++++++|+++
T Consensus 179 ---~~~i~~~----~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~ 251 (357)
T 3s3l_A 179 ---FARVLST----ATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDA 251 (357)
T ss_dssp ---SEEEEEE----EEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CCeEEEE----EEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHc
Confidence 2234433 33333321 0 00001 1 1 13456789999999
Q ss_pred CCCCCCccEEEe-cCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCC
Q psy612 750 NLNPEDINYIIT-HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 828 (1005)
Q Consensus 750 gi~~~~I~yve~-hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~ 828 (1005)
|++++||+++-. |-.... -+ ++.+.++-... + +.. .+-..+||+.+|+=...|..++ +.|.+.|
T Consensus 252 gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~e--k-~~~-~~~~~~GNt~aAsipl~L~~~~---~~g~l~~-- 316 (357)
T 3s3l_A 252 GTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDE--R-TSW-AYGRTTGHVGAGDQYAGLAHLV---ENALVQP-- 316 (357)
T ss_dssp TCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGG--G-BTH-HHHHHHCBCTTCHHHHHHHHHH---HTTCCCT--
T ss_pred CCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHH--H-hHH-HhccccccchHhHHHHHHHHHH---HcCCCCC--
Confidence 999999999996 876655 33 34444543211 1 111 1212368888888665554432 3332211
Q ss_pred CCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEec
Q psy612 829 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881 (1005)
Q Consensus 829 ~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 881 (1005)
....++.+||.|-+-+.++|+-
T Consensus 317 -------------------------------Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 317 -------------------------------GDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp -------------------------------TCEEEEECCBTTTEEEEEEEEE
T ss_pred -------------------------------CCEEEEEEEchhhhheeeeEEe
Confidence 1245788999999999999984
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-12 Score=116.50 Aligned_cols=78 Identities=10% Similarity=0.236 Sum_probs=72.0
Q ss_pred chhHHHHHHHHHHHHHHhC-CCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 332 NIEKFIENDIKNHICNILN-TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 332 ~~~~~~~~~l~~~ia~~L~-~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
...+.++..+++.|+++|+ .+.++|+++++|++||+|||++++|+++|++.||++++.+.+|++||+.+|++||.++.
T Consensus 16 ~~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 16 ERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 3455678899999999999 67889999999999999999999999999999999999999999999999999997753
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=7.4e-12 Score=141.14 Aligned_cols=162 Identities=16% Similarity=0.149 Sum_probs=116.5
Q ss_pred CEEEEECChhHHHHHHHHHHHHc--CCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~--Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++|||||+|+||..+++.|+++ |..++++.++.. ...+....+ .+.++.++.+|++|++++.++++ .
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 75 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K 75 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence 68999999999999999999999 665555544321 111111111 13568899999999988877664 3
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------ 213 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~------------ 213 (1005)
+|+|||+||... . +.+.++++..+++|+.|+.++.+++.+. .. +||++||.+.+-
T Consensus 76 ~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-------~~-~~v~~SS~~vyg~~~~~~~~~~~~ 142 (348)
T 1oc2_A 76 ADAIVHYAAESH-N----DNSLNDPSPFIHTNFIGTYTLLEAARKY-------DI-RFHHVSTDEVYGDLPLREDLPGHG 142 (348)
T ss_dssp CSEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred CCEEEECCcccC-c----cchhhCHHHHHHHHHHHHHHHHHHHHHh-------CC-eEEEecccceeCCCcccccccccc
Confidence 599999999754 1 2234567789999999999999997653 23 899999976331
Q ss_pred -----------CCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 214 -----------GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 214 -----------g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
+......|+.+|.+.+.+++....+ ++ +++.+.++.+-+
T Consensus 143 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi------~~~ilrp~~v~G 193 (348)
T 1oc2_A 143 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV------KATISNCSNNYG 193 (348)
T ss_dssp CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCEES
T ss_pred cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCC------CEEEEeeceeeC
Confidence 1224578999999999999876544 33 778887766543
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=9.4e-12 Score=139.71 Aligned_cols=161 Identities=16% Similarity=0.168 Sum_probs=115.0
Q ss_pred EEEEECChhHHHHHHHHHHHHc---C---CcEEEEecCCCc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 70 TYLITGGTGRLGMLFSDYLINK---Y---STNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~---G---a~~vil~~r~~~--~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
++|||||+|+||..+++.|+++ | .+++++ .|... ..+..+.+. .+.++.++.+|++|++++.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEE-ECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEE-ECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 5899999999999999999996 6 554444 44321 111111121 1357889999999998877665
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--------
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-------- 213 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-------- 213 (1005)
.++|.|||+||... . +.+.++++..+++|+.|+.++.+++.+. ..++||++||.+.+-
T Consensus 75 --~~~d~Vih~A~~~~-~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-------~~~~~v~~SS~~vyg~~~~~~~~ 140 (337)
T 1r6d_A 75 --RGVDAIVHFAAESH-V----DRSIAGASVFTETNVQGTQTLLQCAVDA-------GVGRVVHVSTNQVYGSIDSGSWT 140 (337)
T ss_dssp --TTCCEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-------TCCEEEEEEEGGGGCCCSSSCBC
T ss_pred --cCCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEecchHHhCCCCCCCCC
Confidence 47999999999754 1 1234556789999999999999996542 456899999976432
Q ss_pred ---CCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 214 ---GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 214 ---g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
+......|+.+|.+.+.+++....+ ++ +++.+.++..-
T Consensus 141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~------~~~ilrp~~v~ 182 (337)
T 1r6d_A 141 ESSPLEPNSPYAASKAGSDLVARAYHRTYGL------DVRITRCCNNY 182 (337)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEE
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHCC------CEEEEEeeeeE
Confidence 1234578999999999999876543 33 67777765543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=136.74 Aligned_cols=158 Identities=14% Similarity=0.136 Sum_probs=117.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHc--CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~--Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+|+||..+++.|+++ |..++++.++.... +. .. .+.++.+|++|.+++.++++.. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~----~~---~~~~~~~D~~d~~~~~~~~~~~-----~ 68 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-DV----VN---SGPFEVVNALDFNQIEHLVEVH-----K 68 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-HH----HH---SSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-cc----cC---CCceEEecCCCHHHHHHHHhhc-----C
Confidence 367999999999999999999999 77766666544332 11 11 3467899999999988887653 6
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+||... .. ..++++..+++|+.|+.++.+++. ....++||++||.+.+-+..
T Consensus 69 ~d~vih~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~SS~~~~~~~~~~~~~~e~~ 135 (312)
T 2yy7_A 69 ITDIYLMAALLS-AT-----AEKNPAFAWDLNMNSLFHVLNLAK-------AKKIKKIFWPSSIAVFGPTTPKENTPQYT 135 (312)
T ss_dssp CCEEEECCCCCH-HH-----HHHCHHHHHHHHHHHHHHHHHHHH-------TTSCSEEECCEEGGGCCTTSCSSSBCSSC
T ss_pred CCEEEECCccCC-Cc-----hhhChHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEeccHHHhCCCCCCCCccccC
Confidence 999999999754 21 135577889999999999999853 33457899999986543322
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 217 ---GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 ---g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|.+.+.+++....+ ++ +++.+..+.+-
T Consensus 136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~lrp~~v~ 174 (312)
T 2yy7_A 136 IMEPSTVYGISKQAGERWCEYYHNIYGV------DVRSIRYPGLI 174 (312)
T ss_dssp BCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEECEEECEEE
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHhcCC------cEEEEeCCeEe
Confidence 2568999999999999876543 33 77777665543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=9.6e-12 Score=138.28 Aligned_cols=153 Identities=18% Similarity=0.265 Sum_probs=115.2
Q ss_pred EEEECChhHHHHHHHHHHHHc--CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 71 YLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~--Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+|||||+|+||..+++.|+++ |..++++.++..... .+.++.+|++|++++.++++. .++|.
T Consensus 2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d~ 65 (317)
T 3ajr_A 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSIDA 65 (317)
T ss_dssp EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCCE
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCcE
Confidence 799999999999999999998 666666655443221 346789999999998888765 26999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------ 216 (1005)
|||+||... .. ..++++..+++|+.|+.++.+++.. ...++||++||.+.+-+..
T Consensus 66 vih~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 132 (317)
T 3ajr_A 66 IFHLAGILS-AK-----GEKDPALAYKVNMNGTYNILEAAKQ-------HRVEKVVIPSTIGVFGPETPKNKVPSITITR 132 (317)
T ss_dssp EEECCCCCH-HH-----HHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCC
T ss_pred EEECCcccC-Cc-----cccChHHHhhhhhHHHHHHHHHHHH-------cCCCEEEEecCHHHhCCCCCCCCccccccCC
Confidence 999999754 21 2345778899999999999998532 3467899999987654321
Q ss_pred CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|.+.+.+++..... ++ +++.+..+.+-+
T Consensus 133 p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~lR~~~~~g 169 (317)
T 3ajr_A 133 PRTMFGVTKIAAELLGQYYYEKFGL------DVRSLRYPGIIS 169 (317)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHHhcCC------eEEEEecCcEec
Confidence 3578999999999999876443 44 777776655544
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-11 Score=139.71 Aligned_cols=163 Identities=15% Similarity=0.229 Sum_probs=116.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||..+++.|+++| ..++++.++.....+ .+. ....+.++.+|++|++++.++++ +
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~ 99 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-------E 99 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh-------C
Confidence 46799999999999999999999999 655555433322111 111 14568899999999887765543 7
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc-----------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAIL----------- 213 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~-~~~~iV~~SSia~~~----------- 213 (1005)
+|.|||+||... .. .+.++++..+++|+.|+.++.+++ ... ..++||++||.+.+-
T Consensus 100 ~d~Vih~A~~~~-~~----~~~~~~~~~~~~nv~~~~~ll~a~-------~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E 167 (377)
T 2q1s_A 100 YDYVFHLATYHG-NQ----SSIHDPLADHENNTLTTLKLYERL-------KHFKRLKKVVYSAAGCSIAEKTFDDAKATE 167 (377)
T ss_dssp CSEEEECCCCSC-HH----HHHHCHHHHHHHHTHHHHHHHHHH-------TTCSSCCEEEEEEEC--------------C
T ss_pred CCEEEECCCccC-ch----hhhhCHHHHHHHHHHHHHHHHHHH-------HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence 999999999754 21 234567889999999999999984 334 457899999975321
Q ss_pred -----CC-CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 214 -----GD-FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 214 -----g~-~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
+. .....|+.+|.+.+.+++....+ ++ +++.+.++.+-+
T Consensus 168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilRp~~v~G 213 (377)
T 2q1s_A 168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQL------PTVRARFQNVYG 213 (377)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCEEC
T ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHhCC------CEEEEeeccEEC
Confidence 11 34568999999999999876543 33 677777665543
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.29 E-value=9.9e-12 Score=138.12 Aligned_cols=136 Identities=16% Similarity=0.083 Sum_probs=82.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++|||||+|+||.++++.|+++|.+++++ .|+... + . ++.+|++|++++.++++.. ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d 62 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGC-GFRRAR----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH 62 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEE-C-------------------------------CHHHHHHH-----CCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEE-ccCCCC----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence 4789999999999999999999999765555 443211 1 1 6789999999988888764 699
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------CCC
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------DFG 217 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g----------~~g 217 (1005)
.|||+||... . +.+.++++..+++|+.|+.++.+++.+. . .+||++||.+.+-+ ...
T Consensus 63 ~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~-~~~v~~SS~~v~~~~~~~~~E~~~~~~ 129 (315)
T 2ydy_A 63 VIVHCAAERR-P----DVVENQPDAASQLNVDASGNLAKEAAAV-------G-AFLIYISSDYVFDGTNPPYREEDIPAP 129 (315)
T ss_dssp EEEECC------------------------CHHHHHHHHHHHHH-------T-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred EEEECCcccC-h----hhhhcCHHHHHHHHHHHHHHHHHHHHHc-------C-CeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence 9999999754 2 2245678899999999999999997542 2 38999999876543 234
Q ss_pred ChhhhHHHHHHHHHHHHH
Q psy612 218 SCDYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~ 235 (1005)
...|+.+|.+++.+++..
T Consensus 130 ~~~Y~~sK~~~e~~~~~~ 147 (315)
T 2ydy_A 130 LNLYGKTKLDGEKAVLEN 147 (315)
T ss_dssp CSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHh
Confidence 678999999999999876
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.8e-12 Score=142.31 Aligned_cols=157 Identities=15% Similarity=0.104 Sum_probs=113.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+|+||+++++.|+++|..++++.++.....+. ....+.++.+|++|.+ +.+++ .. |.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~-------~~-d~ 65 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGI-------KG-DV 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTC-------CC-SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhc-------CC-CE
Confidence 3689999999999999999999998766655443322211 1345788999999976 54333 23 99
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------CC
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FG 217 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-----------~g 217 (1005)
|||+||... . ..+.++++..+++|+.|+.++.+++.. ...++||++||.+.+-.. ..
T Consensus 66 vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p 133 (312)
T 3ko8_A 66 VFHFAANPE-V----RLSTTEPIVHFNENVVATFNVLEWARQ-------TGVRTVVFASSSTVYGDADVIPTPEEEPYKP 133 (312)
T ss_dssp EEECCSSCS-S----SGGGSCHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred EEECCCCCC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence 999999643 1 234455778899999999999998643 245689999997654221 23
Q ss_pred ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 218 SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|.+.+.+++....+ ++ +++.+.++..-+
T Consensus 134 ~~~Y~~sK~~~e~~~~~~~~~~g~------~~~~lrp~~v~g 169 (312)
T 3ko8_A 134 ISVYGAAKAAGEVMCATYARLFGV------RCLAVRYANVVG 169 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEEC
T ss_pred CChHHHHHHHHHHHHHHHHHHhCC------CEEEEeeccccC
Confidence 578999999999999877654 44 777787765543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.2e-11 Score=138.76 Aligned_cols=161 Identities=12% Similarity=0.133 Sum_probs=118.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCC-CHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS-DKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvt-d~~~v~~~~~~i~~~~g 144 (1005)
..+++|||||+|.||..+++.|+++ |..++++.++....... .. ...+.++.+|++ |.+.+.++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~~d~~~~~~~~~------- 90 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL----VK-HERMHFFEGDITINKEWVEYHVK------- 90 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG----GG-STTEEEEECCTTTCHHHHHHHHH-------
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh----cc-CCCeEEEeCccCCCHHHHHHHhc-------
Confidence 4689999999999999999999999 76655555443322211 11 246899999999 9998888775
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------- 215 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--------- 215 (1005)
.+|.|||+||... ... ..++....+++|+.|+.++.+++... . .+||++||.+ .+|.
T Consensus 91 ~~d~Vih~A~~~~-~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~-------~-~~~v~~SS~~-vyg~~~~~~~~e~ 156 (372)
T 3slg_A 91 KCDVILPLVAIAT-PAT----YVKQPLRVFELDFEANLPIVRSAVKY-------G-KHLVFPSTSE-VYGMCADEQFDPD 156 (372)
T ss_dssp HCSEEEECBCCCC-HHH----HHHCHHHHHHHHTTTTHHHHHHHHHH-------T-CEEEEECCGG-GGBSCCCSSBCTT
T ss_pred cCCEEEEcCcccc-HHH----HhhCHHHHHHHHHHHHHHHHHHHHHh-------C-CcEEEeCcHH-HhCCCCCCCCCcc
Confidence 4899999999765 221 23445678899999999999986432 3 6899999954 3333
Q ss_pred ----------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCc
Q psy612 216 ----------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 259 (1005)
Q Consensus 216 ----------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 259 (1005)
.....|+.+|...+.+++.....++ +++.+..+.+-+.
T Consensus 157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~------~~~ilRp~~v~G~ 204 (372)
T 3slg_A 157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGL------NFTLFRPFNWIGP 204 (372)
T ss_dssp TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTC------EEEEEEECSEECS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCC------CEEEEccccccCC
Confidence 1233799999999999988766554 7788877665443
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.8e-12 Score=144.01 Aligned_cols=165 Identities=19% Similarity=0.159 Sum_probs=111.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchH--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~--~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+|+||..+++.|+++|..++++.++.+... .....+. .+.++.++.+|++|.+++.++++ .
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~ 80 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G 80 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence 678999999999999999999999987666555433211 1112232 23468889999999887776653 4
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|+|||+|+... . . ..+..++.+++|+.|+.++.+++.+. ...++||++||.+++.+.+
T Consensus 81 ~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~------~~v~r~V~~SS~~~~~~~~~~~~~~~~~ 148 (338)
T 2rh8_A 81 CDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRA------KSVKRVILTSSAAAVTINQLDGTGLVVD 148 (338)
T ss_dssp CSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHC------TTCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred CCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHc------CCcCEEEEEecHHHeecCCcCCCCcccC
Confidence 799999998643 1 1 11222458999999999999986431 1257899999987433210
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 217 ---------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ---------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+++|.+.+.++..... .++ +++.|.++...+
T Consensus 149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~~lrp~~v~G 200 (338)
T 2rh8_A 149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNI------DLITVIPTLMAG 200 (338)
T ss_dssp TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTC------CEEEEEECEEES
T ss_pred hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceEC
Confidence 011599999999998876543 344 778887766543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=8.8e-12 Score=141.23 Aligned_cols=163 Identities=14% Similarity=0.150 Sum_probs=114.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+|+||..+++.|+++| ..+++ +.|+..... ...+. + +. +.+|++|.+.++++++. ..+++
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~-~~~~~--~--~~-~~~d~~~~~~~~~~~~~--~~~~~ 115 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILV-VDNLKDGTK-FVNLV--D--LN-IADYMDKEDFLIQIMAG--EEFGD 115 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEE-EECCSSGGG-GGGTT--T--SC-CSEEEEHHHHHHHHHTT--CCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEE-EecCCCcch-hhccc--C--ce-EeeecCcHHHHHHHHhh--cccCC
Confidence 45789999999999999999999999 55554 455432211 11111 1 12 67899999888877754 23678
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC--------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-------- 217 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-------- 217 (1005)
+|.|||+||... . +.++++..+++|+.|+.++.+++.+. .. +||++||.+.+-...+
T Consensus 116 ~d~Vih~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~a~~~~-------~~-r~V~~SS~~v~g~~~~~~~~E~~~ 180 (357)
T 2x6t_A 116 VEAIFHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER-------EI-PFLYASSAATYGGRTSDFIESREY 180 (357)
T ss_dssp CCEEEECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH-------TC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred CCEEEECCcccC-C------ccCCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence 999999999765 2 22346789999999999999997542 34 7999999875433322
Q ss_pred ---ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 218 ---SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 ---~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|.+.+.+++....+. +.+++.|.++.+-+
T Consensus 181 ~~p~~~Y~~sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~G 219 (357)
T 2x6t_A 181 EKPLNVFGYSKFLFDEYVRQILPEA-----NSQIVGFRYFNVYG 219 (357)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHGGGC-----SSCEEEEEECEEES
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEecCeEEC
Confidence 5689999999999998876541 23677777665543
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=99.27 E-value=9.1e-12 Score=111.02 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
...++..+.+.|+++|+++.++|+++++|++||+|||++++|..+|++.||+++++..+|++||+.+|++||.+++
T Consensus 12 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 12 VEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 3457788999999999998889999999999999999999999999999999999999999999999999997754
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-11 Score=132.47 Aligned_cols=132 Identities=16% Similarity=0.145 Sum_probs=103.3
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||+|+||+++++.|+ +|.+++++ .|+.... .+ +.+|++|++++.++++.+ ++|+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~-~r~~~~~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v 61 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKV-YNSSEIQ--------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI 61 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEE-ESSSCCT--------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEe-cCCCcCC--------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999 47655554 4443221 12 789999999999888765 69999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC----------Ch
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------SC 219 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g----------~~ 219 (1005)
|||||... . +.+.++++..+++|+.|+.++.+++.+ .. .+||++||.+.+.+..+ ..
T Consensus 62 i~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~ 128 (273)
T 2ggs_A 62 INAAAMTD-V----DKCEIEKEKAYKINAEAVRHIVRAGKV-------ID-SYIVHISTDYVFDGEKGNYKEEDIPNPIN 128 (273)
T ss_dssp EECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred EECCcccC-h----hhhhhCHHHHHHHhHHHHHHHHHHHHH-------hC-CeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence 99999764 2 123567889999999999999999643 23 48999999987655443 57
Q ss_pred hhhHHHHHHHHHHHH
Q psy612 220 DYAMGNRFQTVYAKY 234 (1005)
Q Consensus 220 ~Yaaana~l~~la~~ 234 (1005)
.|+++|.+++.+++.
T Consensus 129 ~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 129 YYGLSKLLGETFALQ 143 (273)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999998865
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=5.3e-12 Score=131.93 Aligned_cols=149 Identities=13% Similarity=0.017 Sum_probs=112.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++||||+|+||+++++.|+++|. ..|+++.|++.. ...++.++.+|++|++++.+++ +
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~---------~ 66 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS---------I 66 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC---------C
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh---------h
Confidence 57899999999999999999999997 356666665432 1346788899999876654433 9
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|.||||||... . +.++++..+++|+.++.++.+++.+ ...++||++||..... .....|+.+|.
T Consensus 67 d~vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~Ss~~~~~--~~~~~y~~sK~ 130 (215)
T 2a35_A 67 DTAFCCLGTTI-K------EAGSEEAFRAVDFDLPLAVGKRALE-------MGARHYLVVSALGADA--KSSIFYNRVKG 130 (215)
T ss_dssp SEEEECCCCCH-H------HHSSHHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEECCTTCCT--TCSSHHHHHHH
T ss_pred cEEEECeeecc-c------cCCCHHHHHHhhHHHHHHHHHHHHH-------cCCCEEEEECCcccCC--CCccHHHHHHH
Confidence 99999999754 2 1345778889999999999998532 3457899999987653 24568999999
Q ss_pred HHHHHHHHHHhccccccCCce-EEEEeCCcccCc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNK-LITINWPLWNNS 259 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~-~~si~wg~w~~~ 259 (1005)
.++.+.+. .++ + ++.|.++.+.+.
T Consensus 131 ~~e~~~~~---~~~------~~~~~vrp~~v~g~ 155 (215)
T 2a35_A 131 ELEQALQE---QGW------PQLTIARPSLLFGP 155 (215)
T ss_dssp HHHHHHTT---SCC------SEEEEEECCSEEST
T ss_pred HHHHHHHH---cCC------CeEEEEeCceeeCC
Confidence 99988753 233 6 788887776543
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.4e-11 Score=133.43 Aligned_cols=132 Identities=17% Similarity=0.159 Sum_probs=103.4
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+.+++|||||+|.||.++++.|+++|..+++ +.|+ .+|++|.+++.++++.. +
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~--------------------~~Dl~d~~~~~~~~~~~-----~ 63 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIP-TDVQ--------------------DLDITNVLAVNKFFNEK-----K 63 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEE-ECTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEe-ccCc--------------------cCCCCCHHHHHHHHHhc-----C
Confidence 35689999999999999999999999875444 4553 27999999998888764 6
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+||... . +.+.++++..+++|+.|+.++.+++.+. .. +||++||.+.+-+..
T Consensus 64 ~d~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-------~~-~iv~~SS~~v~~~~~~~~~~E~~~ 130 (292)
T 1vl0_A 64 PNVVINCAAHTA-V----DKCEEQYDLAYKINAIGPKNLAAAAYSV-------GA-EIVQISTDYVFDGEAKEPITEFDE 130 (292)
T ss_dssp CSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred CCEEEECCccCC-H----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEechHHeECCCCCCCCCCCCC
Confidence 999999999754 2 2234678899999999999999997542 33 899999986543322
Q ss_pred --CChhhhHHHHHHHHHHHHHH
Q psy612 217 --GSCDYAMGNRFQTVYAKYLN 236 (1005)
Q Consensus 217 --g~~~Yaaana~l~~la~~~~ 236 (1005)
....|+.+|.+.+.+++...
T Consensus 131 ~~~~~~Y~~sK~~~E~~~~~~~ 152 (292)
T 1vl0_A 131 VNPQSAYGKTKLEGENFVKALN 152 (292)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHHHHHHHHhhC
Confidence 35689999999999997754
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-11 Score=147.81 Aligned_cols=167 Identities=19% Similarity=0.214 Sum_probs=117.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|+||+++++.|+++|.+++++.++.....+..+.++. .+..+.++.+|++|.+++.++++.. +
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~ 84 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----K 84 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----C
Confidence 468999999999999999999999998766665544332222333332 1345778899999999988887653 7
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 215 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~---------- 215 (1005)
+|+|||+||... .... .+.....+++|+.|+.++.+++.. ...++||++||.+.. |.
T Consensus 85 ~D~Vih~A~~~~-~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~-------~~~~~iV~~SS~~vy-g~~~~~~~~~~~ 151 (699)
T 1z45_A 85 IDSVIHFAGLKA-VGES----TQIPLRYYHNNILGTVVLLELMQQ-------YNVSKFVFSSSATVY-GDATRFPNMIPI 151 (699)
T ss_dssp CCEEEECCSCCC-HHHH----HHSHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEEEEGGGG-CCGGGSTTCCSB
T ss_pred CCEEEECCcccC-cCcc----ccCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEECcHHHh-CCCccccccCCc
Confidence 999999999764 2222 122356789999999999887532 245789999997643 21
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCC
Q psy612 216 ------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 254 (1005)
Q Consensus 216 ------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 254 (1005)
.....|+.+|.+++.+++....+. ..+.+++.+..+
T Consensus 152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~g~~~~ilR~~ 193 (699)
T 1z45_A 152 PEECPLGPTNPYGHTKYAIENILNDLYNSD---KKSWKFAILRYF 193 (699)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---TTSCEEEEEEEC
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHhc---cCCCcEEEEEec
Confidence 124689999999999998775531 012266666543
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.2e-11 Score=141.37 Aligned_cols=163 Identities=17% Similarity=0.175 Sum_probs=117.1
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHc---CCcEEEEecCCCchHHHHHHHHh----------------CCCcEEEEEec
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINK---YSTNLILSGRSKLNSIIYKKLKK----------------FNNKAIYIQVD 125 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~---Ga~~vil~~r~~~~~~~~~~l~~----------------~g~~v~~~~~D 125 (1005)
..+++++|||||+|+||.++++.|+++ |.+++++ .|+.......+++.+ ...++.++.+|
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l-~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICL-VRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEE-ECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEE-ECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 346899999999999999999999999 6655554 454433333333322 13579999999
Q ss_pred CC------CHHHHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC
Q psy612 126 VS------DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK 199 (1005)
Q Consensus 126 vt------d~~~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~ 199 (1005)
++ |.+.+.++++ .+|+||||||... . +.++..+++|+.|+.++.+++ ....
T Consensus 149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-~--------~~~~~~~~~Nv~gt~~ll~aa-------~~~~ 205 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-A--------FPYHELFGPNVAGTAELIRIA-------LTTK 205 (478)
T ss_dssp TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-B--------SSCCEEHHHHHHHHHHHHHHH-------TSSS
T ss_pred CCCcccCCCHHHHHHHHc-------CCCEEEECccccC-C--------cCHHHHHHHHHHHHHHHHHHH-------HhCC
Confidence 99 6566666654 4899999999865 3 123457889999999999984 3345
Q ss_pred CcEEEEecCcccccCCCCC-----------------------hhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCc
Q psy612 200 LDFVCYFSSSSAILGDFGS-----------------------CDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPL 255 (1005)
Q Consensus 200 ~~~iV~~SSia~~~g~~g~-----------------------~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~ 255 (1005)
...||++||.+. .+.... ..|+.+|...+.+++.... .++ +++.+.++.
T Consensus 206 ~~~~V~iSS~~v-~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ivRpg~ 278 (478)
T 4dqv_A 206 LKPFTYVSTADV-GAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCAL------PVAVFRCGM 278 (478)
T ss_dssp CCCEEEEEEGGG-GTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCC------CEEEEEECE
T ss_pred CCeEEEEeehhh-cCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCC------CeEEEECce
Confidence 568999999754 332111 3399999999999988765 344 788888776
Q ss_pred ccC
Q psy612 256 WNN 258 (1005)
Q Consensus 256 w~~ 258 (1005)
+-+
T Consensus 279 v~G 281 (478)
T 4dqv_A 279 ILA 281 (478)
T ss_dssp EEC
T ss_pred eeC
Confidence 643
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-11 Score=112.18 Aligned_cols=75 Identities=12% Similarity=0.179 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 333 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 333 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+...++..|.++|+++|++ ++|+++++|+++|+|||++++|..+|++.||++++...+|++|||.+|+++|.+..
T Consensus 13 ~~~~~e~~l~~i~~~vL~~--~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~ 87 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGR--DSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATL 87 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTC--SCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCC--CCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHc
Confidence 3456788899999999999 46999999999999999999999999999999999999999999999999998754
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.23 E-value=8.3e-11 Score=132.15 Aligned_cols=159 Identities=14% Similarity=0.069 Sum_probs=111.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~~~g~i 146 (1005)
+++|||||+|+||..+++.|+++ |..++++.++....+. +. ....+.++.+|++| .+.+.++++ .+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~-------~~ 68 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL-NHPHFHFVEGDISIHSEWIEYHVK-------KC 68 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GT-TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hh-cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence 36899999999999999999998 6655555444332211 11 12468899999998 455666553 47
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC---------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--------- 217 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g--------- 217 (1005)
|.|||+||... ... ..++++..+++|+.|+.++.+++.. .. .+||++||.+..-...+
T Consensus 69 d~vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~~v~~SS~~v~g~~~~~~~~e~~~~ 135 (345)
T 2bll_A 69 DVVLPLVAIAT-PIE----YTRNPLRVFELDFEENLRIIRYCVK-------YR-KRIIFPSTSEVYGMCSDKYFDEDHSN 135 (345)
T ss_dssp SEEEECBCCCC-HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred CEEEEcccccC-ccc----hhcCHHHHHHHHHHHHHHHHHHHHH-------hC-CeEEEEecHHHcCCCCCCCcCCcccc
Confidence 99999999754 221 1245677899999999999988532 23 78999999764322111
Q ss_pred ---------ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 218 ---------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 ---------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|...+.+++....+ ++ +++.+..+.+-+
T Consensus 136 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~------~~~ilrp~~v~G 180 (345)
T 2bll_A 136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL------QFTLFRPFNWMG 180 (345)
T ss_dssp CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECSEEC
T ss_pred cccCcccCcccccHHHHHHHHHHHHHHHHhcCC------CEEEEcCCcccC
Confidence 127999999999999876543 33 777777666543
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-11 Score=109.56 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCc--cccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMP--SIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~--~~lf~~~Ti~~La~~l~~ 407 (1005)
...+...+++.|+++|++++++|+++.+|++||+|||++++|.++|+++||++++. ..+|++||+.+|++||.+
T Consensus 9 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 9 SNEKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHCcCHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 34577889999999999998899999999999999999999999999999999999 999999999999999975
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-11 Score=112.24 Aligned_cols=77 Identities=26% Similarity=0.447 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
...+++.|++.|+++|+++.++|+++.+|++||+|||++++|+++|++.||++++...+|++||+.+|++||.+++.
T Consensus 19 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~ 95 (99)
T 2liu_A 19 LSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILS 95 (99)
T ss_dssp HHHHHHHHHHHHHHHTTSCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhh
Confidence 45678889999999999998999999999999999999999999999999999999999999999999999987654
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.9e-11 Score=137.19 Aligned_cols=272 Identities=14% Similarity=0.146 Sum_probs=165.3
Q ss_pred CChhhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC
Q psy612 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG 618 (1005)
Q Consensus 539 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G 618 (1005)
+..+....++....|..+++.+||++||++++++. .|++++..+ +. . ...+.++...+|+++
T Consensus 85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~~--------~-----p~~a~~v~~~LGl~~ 146 (387)
T 3oit_A 85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSG-AH--------V-----PGVDFRLVPLLGLRP 146 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CE--------E-----SCHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC--------c-----ccHHHHHHHHhCCCC
Confidence 44555555667889999999999999999988876 678877543 11 1 135788999999998
Q ss_pred C---cccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccE
Q psy612 619 P---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 695 (1005)
Q Consensus 619 p---s~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~ 695 (1005)
. .+.+..+|+|++.||..|...|++|.++.+||+|++.+.. .+..++.+ .++.......+|+|++
T Consensus 147 ~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d~--~~~~~~~~~lFGDGAa 214 (387)
T 3oit_A 147 SVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM----------YFTGPDEG--CFRTLLVQGLFGDGAA 214 (387)
T ss_dssp TCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGG----------TCCCCCSS--SCHHHHHHHHBCCEEE
T ss_pred CcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccch----------hccCcccc--chHhhhcccccccceE
Confidence 4 6899999999999999999999999999999999997421 11122111 1111123678999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEeeecc-CCCC--------CCC---CCCC-----HHHHHHHHHHHHHHc----CCCCC
Q psy612 696 AVVLKRLSRALSDGDPIHAIIRGSGINY-DGKT--------NGI---TAPN-----GISQTELIKSVYKKS----NLNPE 754 (1005)
Q Consensus 696 ~vvLk~l~~A~~~g~~I~avI~g~~~~~-dG~~--------~~~---~~p~-----~~~q~~~i~~al~~a----gi~~~ 754 (1005)
++||++-+... ...++-++....... +... .++ ..+. .....++++++|+++ |++
T Consensus 215 A~vl~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~-- 290 (387)
T 3oit_A 215 AVIVGADADDV--ERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG-- 290 (387)
T ss_dssp EEEEESSCCSS--CCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC-------
T ss_pred EEEEecCCCcc--cCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--
Confidence 99998644111 112333222211111 1100 010 0122 234457788889898 987
Q ss_pred Ccc--EEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCC
Q psy612 755 DIN--YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831 (1005)
Q Consensus 755 ~I~--yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 831 (1005)
|++ ++-.|=.+.. =++++.+.++-...+ +... .+=...||+-+|+=...|-.+ ++. .+.|--
T Consensus 291 d~d~~~~v~Hq~n~~-----il~~v~~~Lgl~~ek---~~~s~~~l~~~GNtssAsip~~L~~~---~~~-~~~~G~--- 355 (387)
T 3oit_A 291 GWNDLFWAVHPGSST-----IMDQVDAALGLEPGK---LAASRRVLSDYGNMSGATVIFALDEL---RRQ-RKEAAA--- 355 (387)
T ss_dssp -GGGSEEEECCCCHH-----HHHHHHHHHTCCTTT---THHHHHHHHHHCBCGGGHHHHHHHHH---HHC----------
T ss_pred cccccEEEECCCCHH-----HHHHHHHHcCCCHHH---HHHHHHHHHHhCchHHhHHHHHHHHH---HHh-hhccCC---
Confidence 555 9999965544 345556666532211 1111 112346999888866555442 121 121100
Q ss_pred CcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEeccc
Q psy612 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 883 (1005)
Q Consensus 832 ~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 883 (1005)
. ..+.....+.+||.|-+-..++|+..|
T Consensus 356 -~-----------------------g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 356 -A-----------------------GEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp ----------------------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred -C-----------------------CCCCCEEEEEEecccceeeeeeeEecc
Confidence 0 001134578899999999999999754
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.4e-11 Score=131.42 Aligned_cols=151 Identities=22% Similarity=0.239 Sum_probs=111.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+|.||..+++.|+++|..++++.++ ....+ ++ .+.++.+|++ .+++.++++ ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d 64 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA----IN----DYEYRVSDYT-LEDLINQLN-------DVD 64 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC-------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc----CC----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence 3689999999999999999999999866665555 32222 22 5788999999 888776664 799
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.|||+||... .. ++...+++|+.|+.++.+++. +....+||++||.+. +|..
T Consensus 65 ~Vih~a~~~~-~~--------~~~~~~~~n~~~~~~ll~a~~-------~~~~~r~v~~SS~~v-yg~~~~~~~~E~~~~ 127 (311)
T 3m2p_A 65 AVVHLAATRG-SQ--------GKISEFHDNEILTQNLYDACY-------ENNISNIVYASTISA-YSDETSLPWNEKELP 127 (311)
T ss_dssp EEEECCCCCC-SS--------SCGGGTHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGG-CCCGGGCSBCTTSCC
T ss_pred EEEEccccCC-CC--------ChHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEEccHHH-hCCCCCCCCCCCCCC
Confidence 9999999865 32 344578899999999999853 235678999999544 3322
Q ss_pred -CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccC
Q psy612 217 -GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 -g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|...+.+++.... .++ +++.+..+..-+
T Consensus 128 ~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilRp~~v~G 165 (311)
T 3m2p_A 128 LPDLMYGVSKLACEHIGNIYSRKKGL------CIKNLRFAHLYG 165 (311)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHSCC------EEEEEEECEEEC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHcCC------CEEEEeeCceeC
Confidence 246899999999999887665 343 777777665543
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-11 Score=130.72 Aligned_cols=149 Identities=15% Similarity=0.089 Sum_probs=110.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++|||||+|.||..+++.|+++|..+++ +.|+. .+|++|.+++.++++.. .+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~-~~r~~-------------------~~D~~d~~~~~~~~~~~-----~~d 57 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRD-------------------ELNLLDSRAVHDFFASE-----RID 57 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEE-CCCTT-------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEE-EecCc-------------------cCCccCHHHHHHHHHhc-----CCC
Confidence 468999999999999999999999886555 44432 27999999988887654 699
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------- 214 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g------------- 214 (1005)
.|||+||... ... ...++.+..+++|+.++.++.+++.. ....+||++||...+-+
T Consensus 58 ~vih~a~~~~-~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 126 (321)
T 1e6u_A 58 QVYLAAAKVG-GIV---ANNTYPADFIYQNMMIESNIIHAAHQ-------NDVNKLLFLGSSCIYPKLAKQPMAESELLQ 126 (321)
T ss_dssp EEEECCCCCC-CHH---HHHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred EEEEcCeecC-Ccc---hhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEccHHHcCCCCCCCcCcccccc
Confidence 9999999754 211 12345677899999999999998542 34568999999765421
Q ss_pred ---CCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 215 ---DFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 215 ---~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
.+....|+.+|.+.+.+++....+ ++ +++.+..+.+-+
T Consensus 127 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilrp~~v~G 168 (321)
T 1e6u_A 127 GTLEPTNEPYAIAKIAGIKLCESYNRQYGR------DYRSVMPTNLYG 168 (321)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEES
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHhCC------CEEEEEeCCcCC
Confidence 111358999999999998876543 33 777777665543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.9e-11 Score=127.02 Aligned_cols=176 Identities=10% Similarity=0.055 Sum_probs=107.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+++|||||+|+||+++++.|+++|...|+++.|++. ..+ .....+.++.+|++|++++.++++ .+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 89 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK------PYPTNSQIIMGDVLNHAALKQAMQ-------GQ 89 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS------SCCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc------cccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence 5789999999999999999999999434555555532 111 123468899999999999887774 57
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC--------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-------- 218 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~-------- 218 (1005)
|+||||||... . ....+.+++.|+ +...++||++||+....+.++.
T Consensus 90 D~vv~~a~~~~-~----------------------~~~~~~~~~~~~---~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~ 143 (236)
T 3qvo_A 90 DIVYANLTGED-L----------------------DIQANSVIAAMK---ACDVKRLIFVLSLGIYDEVPGKFVEWNNAV 143 (236)
T ss_dssp SEEEEECCSTT-H----------------------HHHHHHHHHHHH---HTTCCEEEEECCCCC---------------
T ss_pred CEEEEcCCCCc-h----------------------hHHHHHHHHHHH---HcCCCEEEEEecceecCCCCcccccchhhc
Confidence 99999998532 0 012334455543 3456799999998876655542
Q ss_pred -----hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHH
Q psy612 219 -----CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQL 293 (1005)
Q Consensus 219 -----~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~ 293 (1005)
..|..++. .++..++ +++.|.+|.+.+... ........ .....-..+++++..+++..+
T Consensus 144 ~~~~~~~~~~~~~-------~l~~~gi------~~~~vrPg~i~~~~~-~~~~~~~~--~~~~~~~~i~~~DvA~~i~~l 207 (236)
T 3qvo_A 144 IGEPLKPFRRAAD-------AIEASGL------EYTILRPAWLTDEDI-IDYELTSR--NEPFKGTIVSRKSVAALITDI 207 (236)
T ss_dssp -CGGGHHHHHHHH-------HHHTSCS------EEEEEEECEEECCSC-CCCEEECT--TSCCSCSEEEHHHHHHHHHHH
T ss_pred ccchHHHHHHHHH-------HHHHCCC------CEEEEeCCcccCCCC-cceEEecc--CCCCCCcEECHHHHHHHHHHH
Confidence 23333322 2233444 888888876644211 11000000 000011347899999999998
Q ss_pred Hhccc
Q psy612 294 LIQDK 298 (1005)
Q Consensus 294 l~~~~ 298 (1005)
+..+.
T Consensus 208 l~~~~ 212 (236)
T 3qvo_A 208 IDKPE 212 (236)
T ss_dssp HHSTT
T ss_pred HcCcc
Confidence 87654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.3e-11 Score=130.50 Aligned_cols=159 Identities=14% Similarity=0.132 Sum_probs=110.9
Q ss_pred EEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
+|||||+|+||..+++.|+++| ..++++ .|...... ...+.. .. +.+|++|.+.++++++... ++++|.|
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~-~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~~~~d~v 72 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVV-DNLKDGTK-FVNLVD--LN---IADYMDKEDFLIQIMAGEE--FGDVEAI 72 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEE-ECCSSGGG-GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--CSSCCEE
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEE-ccCCCCch-hhhcCc--ce---eccccccHHHHHHHHhccc--cCCCcEE
Confidence 7999999999999999999999 555544 55432211 112222 22 6789999888777664211 3479999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------C
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------S 218 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-----------~ 218 (1005)
||+||... . +.++++..+++|+.|+.++.+++... .. +||++||.+.+-+..+ .
T Consensus 73 i~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~ 137 (310)
T 1eq2_A 73 FHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER-------EI-PFLYASSAATYGGRTSDFIESREYEKPL 137 (310)
T ss_dssp EECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH-------TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred EECccccc-C------cccCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC
Confidence 99999765 2 22346778999999999999986532 34 7999999864322221 5
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
..|+.+|.+.+.+++....+ .+.+++.+.++.+-+
T Consensus 138 ~~Y~~sK~~~e~~~~~~~~~-----~g~~~~~lrp~~v~G 172 (310)
T 1eq2_A 138 NVYGYSKFLFDEYVRQILPE-----ANSQIVGFRYFNVYG 172 (310)
T ss_dssp SHHHHHHHHHHHHHHHHGGG-----CSSCEEEEEECEEES
T ss_pred ChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeCCcEEC
Confidence 67999999999999877543 123777777665543
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=109.28 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..++..|.+.|+++|+++ +|+++++|+++|+|||++++|..+|++.||++++..++|++||+++|++++.+.
T Consensus 13 ~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 13 NAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp SHHHHHHHHHHHHHHTCS--SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 456788999999999995 799999999999999999999999999999999999999999999999999654
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=129.87 Aligned_cols=160 Identities=16% Similarity=0.070 Sum_probs=109.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
..++++|||||+|+||..+++.|+++|..++++.++.....+....+. ...++.++.+|+++. .+..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~~ 91 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEP------------LYIE 91 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSC------------CCCC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCCh------------hhcC
Confidence 356899999999999999999999999876665543321111111111 134688999999984 2467
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------ 213 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~------------ 213 (1005)
+|.|||+||... .... . ++++..+++|+.|+.++.+++... . ..||++||.+.+-
T Consensus 92 ~d~vih~A~~~~-~~~~-~---~~~~~~~~~n~~~~~~l~~a~~~~-------~-~~~v~~SS~~v~g~~~~~~~~E~~~ 158 (343)
T 2b69_A 92 VDQIYHLASPAS-PPNY-M---YNPIKTLKTNTIGTLNMLGLAKRV-------G-ARLLLASTSEVYGDPEVHPQSEDYW 158 (343)
T ss_dssp CSEEEECCSCCS-HHHH-T---TCHHHHHHHHHHHHHHHHHHHHHH-------T-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred CCEEEECccccC-chhh-h---hCHHHHHHHHHHHHHHHHHHHHHh-------C-CcEEEECcHHHhCCCCCCCCccccc
Confidence 999999999754 2211 1 235678899999999999986432 2 3799999975431
Q ss_pred ----CCCCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 214 ----GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 214 ----g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
+......|+.+|.+.+.+++....+ ++ +++.+..+..-
T Consensus 159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilrp~~v~ 201 (343)
T 2b69_A 159 GHVNPIGPRACYDEGKRVAETMCYAYMKQEGV------EVRVARIFNTF 201 (343)
T ss_dssp CBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCEE
T ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHhCC------cEEEEEEccee
Confidence 1123467999999999998876543 33 66666665443
|
| >2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-11 Score=106.21 Aligned_cols=68 Identities=22% Similarity=0.290 Sum_probs=62.8
Q ss_pred HHHHHHHHHhCCC-CcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 340 DIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 340 ~l~~~ia~~L~~~-~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
.+++.++++|+++ +++|+++.+|.+||+|||+++||++||++.||++||.+++|. +|+.+|++++...
T Consensus 10 ~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~-~Ti~~La~~v~~~ 78 (91)
T 2cg5_B 10 DLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQ-LTLRKLQELSSKA 78 (91)
T ss_dssp THHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHT-CBHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHh-CCHHHHHHHHhcc
Confidence 5789999999996 589999999999999999999999999999999999999988 6999999988653
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-10 Score=126.57 Aligned_cols=129 Identities=17% Similarity=0.157 Sum_probs=100.3
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||+|+||.++++.|+++|..+++ +.| ..+|++|.+++.++++.. ++|+|
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r--------------------~~~D~~d~~~~~~~~~~~-----~~d~v 60 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYP-FDK--------------------KLLDITNISQVQQVVQEI-----RPHII 60 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEE-ECT--------------------TTSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEE-ecc--------------------cccCCCCHHHHHHHHHhc-----CCCEE
Confidence 7999999999999999999999875444 444 137999999999888765 69999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------CC
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----------GS 218 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-----------g~ 218 (1005)
||+||... ... ..++++..+++|+.|+.++.+++... .. .||++||.+.+-+.. ..
T Consensus 61 i~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 127 (287)
T 3sc6_A 61 IHCAAYTK-VDQ----AEKERDLAYVINAIGARNVAVASQLV-------GA-KLVYISTDYVFQGDRPEGYDEFHNPAPI 127 (287)
T ss_dssp EECCCCCC-HHH----HTTCHHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC
T ss_pred EECCcccC-hHH----HhcCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEchhhhcCCCCCCCCCCCCCCCCC
Confidence 99999865 211 12457789999999999999996442 22 699999986543321 24
Q ss_pred hhhhHHHHHHHHHHHHHHh
Q psy612 219 CDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~ 237 (1005)
..|+.+|...+.+++....
T Consensus 128 ~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 128 NIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp SHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHHHhCC
Confidence 6899999999999887643
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=102.64 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHhCCCCc-ccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 336 FIENDIKNHICNILNTKKS-EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~-~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
.+.+.+++.|+++++++++ +|+++.+|++||+|||.+++|..+|+++||++++...+++++|+.+|++|+.++..
T Consensus 4 ~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 79 (82)
T 2ava_A 4 ETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp HHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence 4677899999999999876 89999999999999999999999999999999999999999999999999987643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.7e-10 Score=137.37 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=115.5
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch---HHHHHHHHh---------CCCcEEEEEecCCCHHHHH
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN---SIIYKKLKK---------FNNKAIYIQVDVSDKLKMI 133 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~---~~~~~~l~~---------~g~~v~~~~~Dvtd~~~v~ 133 (1005)
.+.+++|||||+|.||..+++.|.++|..++++.++.... ..+.+.++. ...++.++.+|+++++.+.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 4568999999999999999999988887666665544421 222222221 2467999999999977665
Q ss_pred HHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy612 134 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 213 (1005)
Q Consensus 134 ~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~ 213 (1005)
....+|.|||||+... . ...++..+++|+.|+.++.+++. . ....||++||++.
T Consensus 228 --------~~~~~D~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~-------~-~~~~~v~iSS~~v-- 281 (508)
T 4f6l_B 228 --------LPENMDTIIHAGARTD-H-------FGDDDEFEKVNVQGTVDVIRLAQ-------Q-HHARLIYVSTISV-- 281 (508)
T ss_dssp --------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHH-------T-TTCEEEEEEESCT--
T ss_pred --------CccCCCEEEECCceec-C-------CCCHHHHhhhHHHHHHHHHHHHH-------h-CCCcEEEeCChhh--
Confidence 4568999999999754 1 23466788899999999999853 2 4578999999876
Q ss_pred CC--------------------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 214 GD--------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 214 g~--------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
|. .....|+.+|...+.+.+..+..|+ +++.+..+..-+
T Consensus 282 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi------~~~ilRp~~v~G 340 (508)
T 4f6l_B 282 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGL------DGRIVRVGNLTS 340 (508)
T ss_dssp TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTC------EEEEEEECCEES
T ss_pred ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCC------CEEEEecceecc
Confidence 22 1457899999999999988766665 777777665543
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=101.25 Aligned_cols=72 Identities=25% Similarity=0.334 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+++.|++++++++++|+++.+|+ ++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 4 i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 76 (78)
T 1l0i_A 4 IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGH 76 (78)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 567899999999999989999999995 999999999999999999999999999999999999999999764
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=100.90 Aligned_cols=73 Identities=21% Similarity=0.327 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+++.+++.|++++++++++|+++.+| +++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++.
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~ 75 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKV 75 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 45678999999999998899999999 99999999999999999999999999999999999999999997653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.6e-10 Score=124.11 Aligned_cols=152 Identities=14% Similarity=0.063 Sum_probs=108.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++|||||+|.||+.+++.|+++|. +... ....+.++.+|++|.+++.++++.. ++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~----------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~ 62 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LPGE----------DWVFVSSKDADLTDTAQTRALFEKV-----QP 62 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTC----------EEEECCTTTCCTTSHHHHHHHHHHS-----CC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC-------cccc----------cccccCceecccCCHHHHHHHHhhc-----CC
Confidence 468899999999999999999999987 1100 0012334578999999998888653 69
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 215 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~----------- 215 (1005)
|.|||+|+... .... +.++....+++|+.|+.++.+++. +....+||++||.+.+ |.
T Consensus 63 d~Vih~A~~~~-~~~~---~~~~~~~~~~~nv~gt~~ll~a~~-------~~~~~~~v~~SS~~vy-g~~~~~~~~E~~~ 130 (319)
T 4b8w_A 63 THVIHLAAMVG-GLFR---NIKYNLDFWRKNVHMNDNVLHSAF-------EVGARKVVSCLSTCIF-PDKTTYPIDETMI 130 (319)
T ss_dssp SEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHH-------HTTCSEEEEECCGGGS-CSSCCSSBCGGGG
T ss_pred CEEEECceecc-cccc---cccCHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEEcchhhc-CCCCCCCcccccc
Confidence 99999999754 2111 123356689999999999999853 2346789999998543 32
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 216 ------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 ------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
+....|+.+|...+.+++....+ ++ +++.+..+..-+
T Consensus 131 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilRp~~v~G 174 (319)
T 4b8w_A 131 HNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGC------TFTAVIPTNVFG 174 (319)
T ss_dssp GBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEEC
T ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHHHhhCC------CEEEEeeccccC
Confidence 12225999999999998876543 43 777776655543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=5.8e-10 Score=136.93 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=113.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~-v~~~~~~i~~~~g 144 (1005)
.++++|||||+|+||.++++.|+++ |.+++++.++...... +. ...++.++.+|++|.++ +.++++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~v~~Dl~d~~~~~~~~~~------- 381 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL-NHPHFHFVEGDISIHSEWIEYHVK------- 381 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GT-TCTTEEEEECCTTTCHHHHHHHHH-------
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hc-cCCceEEEECCCCCcHHHHHHhhc-------
Confidence 5678999999999999999999998 6654444443332211 11 13468899999999754 554543
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------- 216 (1005)
.+|.|||+||... ... ..++++..+++|+.|+.++.+++.. .. .+||++||.+.+-+..
T Consensus 382 ~~D~Vih~Aa~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~-------~~-~r~V~~SS~~vyg~~~~~~~~E~~ 448 (660)
T 1z7e_A 382 KCDVVLPLVAIAT-PIE----YTRNPLRVFELDFEENLRIIRYCVK-------YR-KRIIFPSTSEVYGMCSDKYFDEDH 448 (660)
T ss_dssp HCSEEEECCCCCC-THH----HHHSHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEECCGGGGBTCCSSSBCTTT
T ss_pred CCCEEEECceecC-ccc----cccCHHHHHHhhhHHHHHHHHHHHH-------hC-CEEEEEecHHHcCCCCCcccCCCc
Confidence 4899999999765 221 1345678999999999999988643 23 7899999976542211
Q ss_pred ----------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 ----------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ----------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
....|+.+|.+.+.+++....+ ++ +++.+..+.+-+
T Consensus 449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilRpg~v~G 495 (660)
T 1z7e_A 449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL------QFTLFRPFNWMG 495 (660)
T ss_dssp CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECSEES
T ss_pred cccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCC------CEEEECCCcccC
Confidence 1236999999999998876543 44 788888776644
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.08 E-value=6.7e-10 Score=121.44 Aligned_cols=141 Identities=17% Similarity=0.116 Sum_probs=103.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHc--CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~--Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++|||||+|+||+.+++.|+++ |.+++++.++...... +... .+.++.+|++|++++.++++ .+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~~--~~~~~~~D~~d~~~l~~~~~-------~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LADQ--GVEVRHGDYNQPESLQKAFA-------GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHHT--TCEEEECCTTCHHHHHHHTT-------TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhhc--CCeEEEeccCCHHHHHHHHh-------cC
Confidence 35899999999999999999998 8877776655443332 2222 46788999999988876653 48
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|.|||+||... . + ++|+.++.++.+++. +...++||++||.... . ....|+.+|.
T Consensus 68 d~vi~~a~~~~-~--------~------~~n~~~~~~l~~a~~-------~~~~~~~v~~Ss~~~~-~--~~~~y~~~K~ 122 (287)
T 2jl1_A 68 SKLLFISGPHY-D--------N------TLLIVQHANVVKAAR-------DAGVKHIAYTGYAFAE-E--SIIPLAHVHL 122 (287)
T ss_dssp SEEEECCCCCS-C--------H------HHHHHHHHHHHHHHH-------HTTCSEEEEEEETTGG-G--CCSTHHHHHH
T ss_pred CEEEEcCCCCc-C--------c------hHHHHHHHHHHHHHH-------HcCCCEEEEECCCCCC-C--CCCchHHHHH
Confidence 99999998532 1 1 468889998888853 2346789999998764 2 3357999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
..+.+.+. .++ +++.+.++.+
T Consensus 123 ~~E~~~~~---~~~------~~~ilrp~~~ 143 (287)
T 2jl1_A 123 ATEYAIRT---TNI------PYTFLRNALY 143 (287)
T ss_dssp HHHHHHHH---TTC------CEEEEEECCB
T ss_pred HHHHHHHH---cCC------CeEEEECCEe
Confidence 99888752 343 6777776544
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.1e-10 Score=99.48 Aligned_cols=74 Identities=22% Similarity=0.285 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+.+++.|++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 5 ~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (81)
T 2lol_A 5 DKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKER 79 (81)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 4567889999999999998899999999 5999999999999999999999999999999999999999999764
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.4e-09 Score=119.54 Aligned_cols=185 Identities=19% Similarity=0.228 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchhH
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 630 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsSs 630 (1005)
..|..+++.+||++||+++++++ .+++|+... + .+.+..+...++ -|.+.|..+|||+
T Consensus 56 sdLa~~Aa~~AL~~AGi~~~DID----~II~gt~t~-q---------------~~~A~~va~~Lg--ipafdV~~ACsg~ 113 (347)
T 3lma_A 56 RKLMEDAVQSALSKQNLKKEDID----IFLAGDLLN-Q---------------NVTANYVARHLK--IPFLCLFGACSTS 113 (347)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCS----EEEEEESSS-S---------------STTHHHHHHHHC--CCEEEBCCSTTHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCC-c---------------hhHHHHHHHHhC--CCEEEecChhHHH
Confidence 56889999999999999998887 678776442 0 013444555553 4899999999999
Q ss_pred HHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCC
Q psy612 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 710 (1005)
Q Consensus 631 l~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~ 710 (1005)
+.||..|...|++|.++.+||+|++.+........+. ..-+..+|... . ..+.|+|++||.+.. .+.
T Consensus 114 ~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p-----~e~g~q~p~ta---~-~t~dGAGA~VL~~~g----~~p 180 (347)
T 3lma_A 114 MESIAISSALIDGGFAKRALAATSSHNATAERQFRYP-----TEYGGQKPGTA---T-STVTGSGAVVLSQQP----GGI 180 (347)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------CCCEEEEEEEESSC----CSE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCc-----chhcccCCchh---c-EEccceeEEEEEecC----CCC
Confidence 9999999999999999999999999754321100000 00111222222 1 224799999998532 132
Q ss_pred ceEEEEEEeeeccCCC--CCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH--HHHH
Q psy612 711 PIHAIIRGSGINYDGK--TNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA--LHDV 780 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~--~~~~~~p~------~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~a--l~~~ 780 (1005)
+ |++..+ |+ ..+...|+ .++-.+.|++.|+++|++|+|+|||-++ |.-++.. +.++
T Consensus 181 ~----I~~~t~---Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg-------dL~q~g~~il~~l 246 (347)
T 3lma_A 181 K----ITSATV---GRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG-------DLSGVGSPILKDL 246 (347)
T ss_dssp E----EEEEEC---CCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-------SCHHHHHHHHHHH
T ss_pred c----eeeeee---eeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC-------ChHHHHHHHHHHH
Confidence 3 333322 32 13444554 2344577899999999999999999984 5555544 7777
Q ss_pred hccC
Q psy612 781 FKNK 784 (1005)
Q Consensus 781 ~~~~ 784 (1005)
+...
T Consensus 247 ~~~~ 250 (347)
T 3lma_A 247 LKEE 250 (347)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7654
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-10 Score=100.30 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+...+++.|++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 4 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 78 (80)
T 1x3o_A 4 QEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAK 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHH
Confidence 3467789999999999998899999999 9999999999999999999999999999999999999999999765
|
| >2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.8e-10 Score=99.09 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+...+++.|++++++++++|+++.+|+ ++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 6 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2cnr_A 6 EEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDH 80 (82)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHH
Confidence 45678899999999999988999999995 999999999999999999999999999999999999999999764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4e-10 Score=124.04 Aligned_cols=142 Identities=12% Similarity=0.025 Sum_probs=104.5
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
++|||||+|.||..+++.|+ +|..++ .+.|+.. ++.+|++|.+++.++++.. ++|.|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~-~~~r~~~----------------~~~~D~~d~~~~~~~~~~~-----~~d~v 58 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLI-ALDVHSK----------------EFCGDFSNPKGVAETVRKL-----RPDVI 58 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEE-EECTTCS----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEE-Eeccccc----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999 886544 4555431 3578999999998888654 69999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------C
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------S 218 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g-----------~ 218 (1005)
||+||... .. . +.++++..+++|+.|+.++.+++ ..... .||++||.+.+-+..+ .
T Consensus 59 ih~a~~~~-~~-~---~~~~~~~~~~~n~~~~~~l~~a~-------~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 125 (299)
T 1n2s_A 59 VNAAAHTA-VD-K---AESEPELAQLLNATSVEAIAKAA-------NETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL 125 (299)
T ss_dssp EECCCCCC-HH-H---HTTCHHHHHHHHTHHHHHHHHHH-------TTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred EECcccCC-Hh-h---hhcCHHHHHHHHHHHHHHHHHHH-------HHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence 99999754 21 1 22346778999999999999985 22233 7999999865433222 4
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
..|+.+|...+.+++.... +++.+.++..
T Consensus 126 ~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v 154 (299)
T 1n2s_A 126 NVYGKTKLAGEKALQDNCP---------KHLIFRTSWV 154 (299)
T ss_dssp SHHHHHHHHHHHHHHHHCS---------SEEEEEECSE
T ss_pred cHHHHHHHHHHHHHHHhCC---------CeEEEeeeee
Confidence 6899999999998876532 4556665544
|
| >2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.3e-10 Score=99.61 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+.+++.+++.+++++++|+++.+| .+||+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 6 ~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2qnw_A 6 RPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKA 80 (82)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHh
Confidence 4577889999999999999999999999 6999999999999999999999999999999999999999999765
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-10 Score=105.29 Aligned_cols=75 Identities=13% Similarity=0.235 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHhC-CCCcccccCCchhhcCCchHHHHHHHHHHHhhcC-cccCccccccCCCHHHHHHHHHHhhh
Q psy612 334 EKFIENDIKNHICNILN-TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS-LDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~-~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g-~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+..++..|.++|+++|+ + +.|.++++||++|.|||++++|..+|+++|+ ++++..+||++||+.+||++|...+.
T Consensus 23 ~~~~E~~La~iW~~vL~~~--~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~~ 99 (110)
T 2cq8_A 23 ELVTAEAVRSVWQRILPKV--LEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLR 99 (110)
T ss_dssp HHHHHHHHHHHHHHHCSSC--SCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCC--CCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHhc
Confidence 44578899999999998 5 4699999999999999999999999999999 99999999999999999999976553
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.2e-10 Score=119.95 Aligned_cols=75 Identities=16% Similarity=0.331 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+.++..|+++|+++|+++.++|+++.+|++||+|||++++|+++|++.||++|+.+.+|++|||.+|++||.++.
T Consensus 25 ~~i~~~l~~~~a~~l~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~ 99 (212)
T 2l22_A 25 DECAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQL 99 (212)
T ss_dssp THHHHHHHHHHHHHTTCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhc
Confidence 457888999999999999999999999999999999999999999999999999999999999999999998754
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.1e-09 Score=118.28 Aligned_cols=245 Identities=18% Similarity=0.221 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccchh
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 629 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCsS 629 (1005)
.-|..+++.+||++||++++++. .+++++...++.. ...+.+|...||++. +++-|..+|++
T Consensus 63 ~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~~-------------P~~a~~v~~~LGl~~~~a~di~~~C~g 125 (350)
T 4ewp_A 63 PVMAVGAAREALERAGLQGSDLD----AVIVSTVTFPHAT-------------PSAAALVAHEIGATPAPAYDVSAACAG 125 (350)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCS----EEEEECSCCSCSS-------------SCHHHHHHHHTTCTTSCEEEEECGGGH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------CchHHHHHHHhCCCCceEEEeecchhh
Confidence 35889999999999999988876 5777766543321 125678888999976 77888899999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhcCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 709 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g 709 (1005)
++.||..|...|++|.++.+||.+++... . .+.+ . .....+..|+|+++++|++.+..
T Consensus 126 ~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s-~----------~~d~------~-~~~~~~lfgDGA~A~vl~~~~~~---- 183 (350)
T 4ewp_A 126 YCYGVAQADALVRSGTARHVLVVGVERLS-D----------VVDP------T-DRSISFLLGDGAGAVIVAASDEP---- 183 (350)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------GCCT------T-CTTTGGGBCEEEEEEEEEEESSC----
T ss_pred HHHHHHHhhhhhhCCCccceeEeeeeece-e----------cccc------c-ccccccccccchheeeeecccCC----
Confidence 99999999999999999999999999742 1 1111 1 22346788999999999864321
Q ss_pred CceEEEEEEee-ec-------cC--------------CCCC------CCCC----CCH--------HHHHHHHHHHHHHc
Q psy612 710 DPIHAIIRGSG-IN-------YD--------------GKTN------GITA----PNG--------ISQTELIKSVYKKS 749 (1005)
Q Consensus 710 ~~I~avI~g~~-~~-------~d--------------G~~~------~~~~----p~~--------~~q~~~i~~al~~a 749 (1005)
.+.....++- .. .. +... .... -++ ....++++++|+++
T Consensus 184 -~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~ 262 (350)
T 4ewp_A 184 -GISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAA 262 (350)
T ss_dssp -CBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -CccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhh
Confidence 2222222110 00 00 0000 0000 112 12356889999999
Q ss_pred CCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCC
Q psy612 750 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 829 (1005)
Q Consensus 750 gi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~ 829 (1005)
|++++||+++-.|-.+.. =++++.+.++-.. .+..+ ..=..+||+-+|+=...|-.+ ++.+.+.|
T Consensus 263 gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~--~~~~~--~~l~~~GNtssasi~~~L~~~---~~~g~~~~--- 327 (350)
T 4ewp_A 263 GVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPE--SVVVA--RDIADAGNTSAASIPLAMHRL---LEENPELS--- 327 (350)
T ss_dssp TCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCT--TSEEC--CTHHHHCBCGGGHHHHHHHHH---HHHCGGGT---
T ss_pred cCChhHhceEEecCCCHH-----HHHHHHHHcCcCh--HhEEe--cccccccchHHHHHHHHHHHH---HHhCCCCC---
Confidence 999999999999965543 3455666665321 22111 111346999888755444332 33332211
Q ss_pred CCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 830 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 830 ~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
..+.+..+||.|=+-+.+||+
T Consensus 328 ------------------------------Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 328 ------------------------------GGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp ------------------------------TSEEEEEEEETTTEEEEEEEE
T ss_pred ------------------------------cCEEEEEEEchhhEeEEEEEE
Confidence 123467789988788888876
|
| >2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.1e-10 Score=97.91 Aligned_cols=74 Identities=19% Similarity=0.299 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+.+++.+++.+++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+.+|++|+.++
T Consensus 8 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 8 DEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 4577889999999999998999999999 9999999999999999999999999999999999999999999765
|
| >1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-10 Score=100.40 Aligned_cols=73 Identities=14% Similarity=0.219 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
+.+.+.+++.+++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+++|++|+.+
T Consensus 6 ~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (81)
T 1f80_D 6 ADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQN 79 (81)
T ss_dssp CHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHh
Confidence 3467789999999999999999999999 999999999999999999999999999999999999999999854
|
| >3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.5e-10 Score=97.89 Aligned_cols=75 Identities=29% Similarity=0.385 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
..+.+.+++.+++.+++++++|+++.+| .++|+|||.+++|...|+++||++++...+++++|+++|++|+.++.
T Consensus 4 ~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (81)
T 3gzm_A 4 KSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNN 79 (81)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHh
Confidence 3467889999999999999999999999 59999999999999999999999999999999999999999998764
|
| >1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=5.6e-10 Score=101.70 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
..+...|++++++.+++++++|+++.+|.+||+|||.+++|..+|+++||++++...+++.+|+.+|++|+.++..
T Consensus 16 ~~i~~~l~~ila~~l~v~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~~ 91 (100)
T 1vku_A 16 KKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLE 91 (100)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHhh
Confidence 4567789999999999999999999999999999999999999999999999999999999999999999987653
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.00 E-value=6.5e-09 Score=120.80 Aligned_cols=263 Identities=15% Similarity=0.103 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-C-cccc-cccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-P-VMAI-NTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-p-s~~v-~taC 627 (1005)
..|..+++.+||++||++++++. .|++++.. ++. . ...+.+|...||+++ + .+.| ..+|
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId----~li~~t~t-~~~--------~-----P~~a~~v~~~LGl~~~~~~~dv~~~~C 172 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT----HMVSTTCT-DSA--------N-----PGYDHYVAKELGLSDRLEKVLLHGIGC 172 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS-CCC--------S-----SCHHHHHHHHHTCCTTCEEEEECSCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC-CCC--------C-----CcHHHHHHHHhCCCCCeeEEEecCCcc
Confidence 47889999999999999988876 67777654 221 1 125778999999987 4 5778 7999
Q ss_pred hhHHHHHHHHHHHHhc----CCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccc
Q psy612 628 SSSLVATHIACQSLRQ----HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~----G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~ 703 (1005)
++++.||..|.+.|++ |.++.+||.|++.+. ........... ...+.......+|+|++++||++-.
T Consensus 173 sgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S-~~~~~~~~~~~--------~~~~d~~t~~LFGDGAaAvVl~~~~ 243 (465)
T 3e1h_A 173 SGGLAALRTAANLCLGHTARGKPARILVLALEVST-TMVRSELESID--------ALQETRIGIALFSDCASAVILSNGI 243 (465)
T ss_dssp GHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCG-GGHHHHHHHHH--------HHTCCCCHHHHBCCEEEEEEEECCT
T ss_pred hHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecc-hhcCccccccc--------ccccccccccccccceeEEEEEccC
Confidence 9999999999999996 999999999999843 32221111100 0112233457889999999998643
Q ss_pred hhhcCCCceEEEEEEeeecc--CCCC--------CCC---CCCC-----HHHHHHHHHHHHHH-------cCCCCCCccE
Q psy612 704 RALSDGDPIHAIIRGSGINY--DGKT--------NGI---TAPN-----GISQTELIKSVYKK-------SNLNPEDINY 758 (1005)
Q Consensus 704 ~A~~~g~~I~avI~g~~~~~--dG~~--------~~~---~~p~-----~~~q~~~i~~al~~-------agi~~~~I~y 758 (1005)
........++ .+.++.... ++.. .++ ..+. .....++++++|++ +|++++||+|
T Consensus 244 ~~~~~~~~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~ 322 (465)
T 3e1h_A 244 GEAPGKPAIY-DLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDW 322 (465)
T ss_dssp TCCTTCCCSE-EEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEE
T ss_pred CCccccccce-eeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceE
Confidence 2110011233 233332111 1110 000 0111 24456778888887 6899999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHhhc--CCCCCCCCCCCccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKY--KIIPASLHCEKENN 835 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l~~--~~ipp~~~~~~~n~ 835 (1005)
+ .|=-+.. =++++.+.++-...+ +... .+=...||+-+|+=...|-.+ ++. +.+.|-
T Consensus 323 ~-~Hqan~r-----Il~~v~~~Lgl~~ek---~~~s~~~l~~yGNtsSASip~aL~~~---~~~~~g~l~~G-------- 382 (465)
T 3e1h_A 323 A-MHPGGAT-----ILSGAESAMGLTPEH---MRASYDRYINHGNSSSATIFSVLNRL---REKDMDALAPG-------- 382 (465)
T ss_dssp E-ECCSSHH-----HHHHHHHHHTCCGGG---GHHHHHHHHHHCBCGGGHHHHHHHHH---TSTTTTSCSSS--------
T ss_pred E-ecCCChH-----HHHHHHHHhCcCHHH---hHHHHHHHhcceechHhHHHHHHHHH---HHhcccccCCC--------
Confidence 9 9955443 345566666532111 1100 001234898888744443332 222 122211
Q ss_pred ccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 836 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 836 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
..........+||.|=+-..++|+-.
T Consensus 383 ---------------------g~~~d~vll~gfG~Glt~~~~llr~~ 408 (465)
T 3e1h_A 383 ---------------------GKVKEYVVGCAFGPGINVEMCMLKRR 408 (465)
T ss_dssp ---------------------SCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------CCCCCEEEEEEEhHHHhhhheeeEEe
Confidence 00113456789999989899998853
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-09 Score=117.40 Aligned_cols=137 Identities=17% Similarity=0.130 Sum_probs=96.3
Q ss_pred EEEECChhHHHHHHHHHHHHc--CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 71 YLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~--Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+|||||+|+||..+++.|+++ |.+++++.++....+. +... .+.++.+|++|++++.++++ .+|.
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~D~~d~~~~~~~~~-------~~d~ 68 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAAQ--GITVRQADYGDEAALTSALQ-------GVEK 68 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHHT--TCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhcC--CCeEEEcCCCCHHHHHHHHh-------CCCE
Confidence 799999999999999999998 8877766655443332 2222 46788999999988776653 5799
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
|||+||... . .++.++.++.+++.. ...++||++||.... .....|+.+|...
T Consensus 69 vi~~a~~~~-~----------------~~~~~~~~l~~a~~~-------~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~ 121 (286)
T 2zcu_A 69 LLLISSSEV-G----------------QRAPQHRNVINAAKA-------AGVKFIAYTSLLHAD---TSPLGLADEHIET 121 (286)
T ss_dssp EEECC-------------------------CHHHHHHHHHHH-------HTCCEEEEEEETTTT---TCCSTTHHHHHHH
T ss_pred EEEeCCCCc-h----------------HHHHHHHHHHHHHHH-------cCCCEEEEECCCCCC---CCcchhHHHHHHH
Confidence 999998521 1 367788888777532 245789999998765 2345799999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+.+.+. .++ +++.+..+.+
T Consensus 122 e~~~~~---~~~------~~~ilrp~~~ 140 (286)
T 2zcu_A 122 EKMLAD---SGI------VYTLLRNGWY 140 (286)
T ss_dssp HHHHHH---HCS------EEEEEEECCB
T ss_pred HHHHHH---cCC------CeEEEeChHH
Confidence 988753 344 7777776544
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.2e-10 Score=100.98 Aligned_cols=72 Identities=18% Similarity=0.313 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhCCCCc-ccc--cCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 337 IENDIKNHICNILNTKKS-EIY--KNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~-~i~--~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+++.|++.++++++ +|+ ++.+|.+||+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 5 ~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (83)
T 1or5_A 5 TVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 79 (83)
T ss_dssp CHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHH
Confidence 456789999999999877 899 999999999999999999999999999999999999999999999999654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.8e-09 Score=117.40 Aligned_cols=150 Identities=15% Similarity=0.129 Sum_probs=99.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+|+||+++++.|+++|...|+++.|++.... .+.+...+ +.++.+|++|++++.++++ .+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~~~l~~~~--~~~~~~D~~d~~~l~~~~~-------~~d 74 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-AKELRLQG--AEVVQGDQDDQVIMELALN-------GAY 74 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-HHHHHHTT--CEEEECCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-HHHHHHCC--CEEEEecCCCHHHHHHHHh-------cCC
Confidence 5789999999999999999999998334444455433221 23344333 6778999999988877663 489
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---CChhhhHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---GSCDYAMG 224 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~---g~~~Yaaa 224 (1005)
.|||+||... .. . ...++.++.++.+++. +...++||+.|| .+..+.. ....|+.+
T Consensus 75 ~vi~~a~~~~-~~-----~-------~~~~~~~~~~~~~aa~-------~~gv~~iv~~S~-~~~~~~~~~~~~~~y~~s 133 (299)
T 2wm3_A 75 ATFIVTNYWE-SC-----S-------QEQEVKQGKLLADLAR-------RLGLHYVVYSGL-ENIKKLTAGRLAAAHFDG 133 (299)
T ss_dssp EEEECCCHHH-HT-----C-------HHHHHHHHHHHHHHHH-------HHTCSEEEECCC-CCHHHHTTTSCCCHHHHH
T ss_pred EEEEeCCCCc-cc-----c-------chHHHHHHHHHHHHHH-------HcCCCEEEEEcC-ccccccCCCcccCchhhH
Confidence 9999998533 11 1 1234556666666532 224678888555 4433322 24679999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|..++.+.+. .++ +++.+.++.+.
T Consensus 134 K~~~e~~~~~---~gi------~~~ilrp~~~~ 157 (299)
T 2wm3_A 134 KGEVEEYFRD---IGV------PMTSVRLPCYF 157 (299)
T ss_dssp HHHHHHHHHH---HTC------CEEEEECCEEG
T ss_pred HHHHHHHHHH---CCC------CEEEEeecHHh
Confidence 9999988753 344 77777776553
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.5e-10 Score=122.24 Aligned_cols=145 Identities=14% Similarity=0.004 Sum_probs=103.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++|||| +|.||..+++.|+++|..++++.++.+. ....+.++.+|++|.+++.++++ +++|
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~------~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH------LRPE 65 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc------CCCC
Confidence 46799999 5999999999999999877766655442 12457789999999987766553 3699
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.|||+||... .+.+..+++|+.|+.++.+++ .+....+||++||.+.+-...
T Consensus 66 ~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~-------~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 128 (286)
T 3gpi_A 66 ILVYCVAASE----------YSDEHYRLSYVEGLRNTLSAL-------EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI 128 (286)
T ss_dssp EEEECHHHHH----------HC-----CCSHHHHHHHHHHT-------TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCC
T ss_pred EEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHH-------hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCC
Confidence 9999998632 334667899999999999884 444567899999975432221
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
....|+.+|...+.+ +.. + +++.+..+..-
T Consensus 129 p~~~Y~~sK~~~E~~-~~~----~------~~~ilR~~~v~ 158 (286)
T 3gpi_A 129 AKDFSGKRMLEAEAL-LAA----Y------SSTILRFSGIY 158 (286)
T ss_dssp CCSHHHHHHHHHHHH-GGG----S------SEEEEEECEEE
T ss_pred CCChhhHHHHHHHHH-Hhc----C------CeEEEeccccc
Confidence 256899999998887 432 2 66666655443
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.7e-10 Score=101.40 Aligned_cols=76 Identities=12% Similarity=0.147 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
.+.+.+.|++.|++++++++++|+++.+| .+||+|||.+++|..+|+++||++++..++++++|+.+|++|+.++.
T Consensus 13 ~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 89 (99)
T 2dnw_A 13 LEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKK 89 (99)
T ss_dssp HHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHh
Confidence 34577889999999999998999999999 59999999999999999999999999999999999999999998754
|
| >1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=5.8e-10 Score=98.94 Aligned_cols=74 Identities=16% Similarity=0.246 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCc----ccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 337 IENDIKNHICNILNTKKS----EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~----~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+.+.++++++++++++++ +|+++.+|.+||+|||.+++|..+|+++||++++...+++++|+++|++|+.++..
T Consensus 6 ~~~~l~~il~~~l~~~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 83 (86)
T 1af8_A 6 TTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALA 83 (86)
T ss_dssp CHHHHHHHHHTTCCCCSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhh
Confidence 456789999999999876 78999999999999999999999999999999999999999999999999987653
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=114.05 Aligned_cols=76 Identities=17% Similarity=0.356 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
...++..|++.|+++|+++.++|+++++|++||+|||++++|.++|++.||++|+...+|++|||++|++||.++.
T Consensus 128 ~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~ 203 (212)
T 2l22_A 128 RESIQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV 203 (212)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 4567888999999999999899999999999999999999999999999999999999999999999999998764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=8.8e-09 Score=116.45 Aligned_cols=146 Identities=12% Similarity=0.023 Sum_probs=102.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEec-CCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVD-VSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~D-vtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++++||||+|+||+.+++.|+++|.+++++.++..... .+.+... ..+.++.+| ++|++++.++++ .+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~-~~v~~v~~D~l~d~~~l~~~~~-------~~ 74 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI-PNVTLFQGPLLNNVPLMDTLFE-------GA 74 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS-TTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc-CCcEEEECCccCCHHHHHHHHh-------cC
Confidence 467999999999999999999999987666655444321 2334332 357889999 999998877663 47
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCcc-cccCCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSS-AILGDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia-~~~g~~g~~~Yaaa 224 (1005)
|.||||++... . ..|..+ .++.+++. +.. .++||++||.. +..+......|+.+
T Consensus 75 d~Vi~~a~~~~-~---------------~~~~~~-~~l~~aa~-------~~g~v~~~V~~SS~~~~~~~~~~~~~y~~s 130 (352)
T 1xgk_A 75 HLAFINTTSQA-G---------------DEIAIG-KDLADAAK-------RAGTIQHYIYSSMPDHSLYGPWPAVPMWAP 130 (352)
T ss_dssp SEEEECCCSTT-S---------------CHHHHH-HHHHHHHH-------HHSCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred CEEEEcCCCCC-c---------------HHHHHH-HHHHHHHH-------HcCCccEEEEeCCccccccCCCCCccHHHH
Confidence 99999997532 1 124444 55555532 223 57899999987 45565667889999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
|...+.+.+. .++ +++.|..+.+
T Consensus 131 K~~~E~~~~~---~gi------~~~ivrpg~~ 153 (352)
T 1xgk_A 131 KFTVENYVRQ---LGL------PSTFVYAGIY 153 (352)
T ss_dssp HHHHHHHHHT---SSS------CEEEEEECEE
T ss_pred HHHHHHHHHH---cCC------CEEEEeccee
Confidence 9999988864 233 7777775433
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-09 Score=97.50 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCCCc----ccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 338 ENDIKNHICNILNTKKS----EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 338 ~~~l~~~ia~~L~~~~~----~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
.+.|+++|+++++++.+ +|+++.+|.+||+|||.+++|...|+++||++|+...+++++|+.+|++||.++..
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 35688999999998644 79999999999999999999999999999999999999999999999999987653
|
| >1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=100.87 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 411 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~ 411 (1005)
+.+...|++.|++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+.+|++|+.++..+
T Consensus 6 ~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 83 (115)
T 1klp_A 6 EEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEE 83 (115)
T ss_dssp HHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHHcc
Confidence 4577889999999999998999999999 5999999999999999999999999999999999999999999877643
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.89 E-value=7.5e-08 Score=110.42 Aligned_cols=245 Identities=13% Similarity=0.101 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCC--cccc-cc
Q psy612 549 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP--VMAI-NT 625 (1005)
Q Consensus 549 pq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gp--s~~v-~t 625 (1005)
....|..+++.+||++||++++++. .|++++..+ +. . ...+.++...+|+.+. .+.| ..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId----~li~~t~t~-~~--------~-----P~~a~~v~~~LGl~~~~~~~~v~~~ 197 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD----CLITSNSTT-PA--------L-----PGLDVALANRLPLRGDTMLLPATQW 197 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECCSS-CC--------S-----SCHHHHHHHHTTCCTTCEEEEESSC
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEccCC-CC--------c-----CHHHHHHHHHhCCCCCceEEEeeCC
Confidence 4557889999999999999988876 788887654 11 1 1257789999999883 4667 99
Q ss_pred cchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCC----CceecCccEEEEEcc
Q psy612 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLKR 701 (1005)
Q Consensus 626 aCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~----G~~~gEGa~~vvLk~ 701 (1005)
+|+|++.||..|...|++|.++.+||+|++.+... +.++ |.+-+ ...+|+|++++||.+
T Consensus 198 ~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-----------~~~~------d~~~~~lv~~~LFGDGAaAvvl~~ 260 (413)
T 3v7i_A 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTT-----------YQPA------DDTLESLIVRLLFADTAVAAVVTG 260 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-----------CCSS------CCSTTHHHHHHHBCCEEEEEEEES
T ss_pred ccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-----------cCcc------ccchhhhhcceeeccccEEEEEEe
Confidence 99999999999999999999999999999974211 1111 11111 567899999999986
Q ss_pred cchhhcCCCceEEEEEEeeecc--CCCC--------CC---CCCCC----HHHHHHHHHHHHH------HcCCCCCCccE
Q psy612 702 LSRALSDGDPIHAIIRGSGINY--DGKT--------NG---ITAPN----GISQTELIKSVYK------KSNLNPEDINY 758 (1005)
Q Consensus 702 l~~A~~~g~~I~avI~g~~~~~--dG~~--------~~---~~~p~----~~~q~~~i~~al~------~agi~~~~I~y 758 (1005)
-+.. ...+ .|.++.... ++.. .+ ...+. ......+++++|+ ++|++ |++
T Consensus 261 ~~~~----~~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~---id~ 332 (413)
T 3v7i_A 261 RPRP----ESVL-RLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH---PDV 332 (413)
T ss_dssp SCCT----TEEE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC---CCE
T ss_pred cCCC----CCCE-EEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc---eeE
Confidence 4321 1122 334432111 1110 00 01111 2234567889999 89987 999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhccCCCCCCce-eEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCccccc
Q psy612 759 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 837 (1005)
Q Consensus 759 ve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~-~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i 837 (1005)
+-.|-.+.. =++++.+.++..-+..+.. ..-.+. .||+-+|+=...|-.++ +.+ +.|
T Consensus 333 ~v~Hq~~~~-----il~~v~~~Lg~~l~~ek~~~s~~~l~--~GNtssAsi~~~L~~~~---~~~-~~~----------- 390 (413)
T 3v7i_A 333 LLAHPGGTR-----VLEYMEQTMPDEWPSGLLSYSRDSYT--SGNRGGAAVFDILRRAH---DAG-QKT----------- 390 (413)
T ss_dssp EEEECSSHH-----HHHHHHHHSCSSCCSCSTHHHHHHHT--TCBCGGGHHHHHHHHHH---HHC-CCT-----------
T ss_pred EEECCCChH-----HHHHHHHHhCCCCCHHHhhccceEec--eeChHHHHHHHHHHHHH---hCC-CCC-----------
Confidence 999965543 3456666666111111110 122344 79999888665554443 221 111
Q ss_pred ccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 838 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 838 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
.......+||.|=+-..++|+
T Consensus 391 ----------------------Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 391 ----------------------GSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp ----------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCEEEEEEECHHHhHhhhheE
Confidence 123568899998888888876
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.89 E-value=1e-09 Score=121.87 Aligned_cols=155 Identities=15% Similarity=0.029 Sum_probs=100.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++|||||+|.||..+++.|+++|..++++.++..........+.. ....+.++.+|++ .
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~ 69 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------D 69 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------T
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------c
Confidence 57899999999999999999999998766665544310000001111 0123344555555 7
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC---------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 216 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~--------- 216 (1005)
+|.|||+||... .....+. ....++ |+.|+.++.+++... ...+||++||...+-...
T Consensus 70 ~d~vi~~a~~~~-~~~~~~~----~~~~~~-n~~~~~~ll~a~~~~-------~v~~~v~~SS~~v~~~~~~~~~~E~~~ 136 (321)
T 3vps_A 70 VRLVYHLASHKS-VPRSFKQ----PLDYLD-NVDSGRHLLALCTSV-------GVPKVVVGSTCEVYGQADTLPTPEDSP 136 (321)
T ss_dssp EEEEEECCCCCC-HHHHTTS----TTTTHH-HHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred CCEEEECCccCC-hHHHHhC----HHHHHH-HHHHHHHHHHHHHHc-------CCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence 999999999765 2211111 123445 999999999986432 357899999976543222
Q ss_pred --CChhhhHHHHHHHHHHHHHHhccccccCCc-eEEEEeCCccc
Q psy612 217 --GSCDYAMGNRFQTVYAKYLNNKNIYKKYTN-KLITINWPLWN 257 (1005)
Q Consensus 217 --g~~~Yaaana~l~~la~~~~~~g~~~~~~~-~~~si~wg~w~ 257 (1005)
....|+.+|...+.+++....+. +. +++.+..+.+-
T Consensus 137 ~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~ilRp~~v~ 175 (321)
T 3vps_A 137 LSPRSPYAASKVGLEMVAGAHQRAS-----VAPEVGIVRFFNVY 175 (321)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHSS-----SSCEEEEEEECEEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHc-----CCCceEEEEecccc
Confidence 24789999999999998876542 33 56666655443
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=9.4e-10 Score=125.55 Aligned_cols=213 Identities=15% Similarity=0.138 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
..-|..+++.+||+++| ++++. .|++|+..+.+.. ...+.+|...||+++ |++.+..+|
T Consensus 56 ~~~La~~Aa~~aL~~a~--~~~Id----~li~~t~t~~~~~-------------ps~a~~v~~~LGl~~~~~~~dv~~aC 116 (388)
T 3v4n_A 56 IVTFAANAAEAILTKED--KEAID----MVIVGTESSIDES-------------KAAAVVLHRLMGIQPFARSFEIKEAX 116 (388)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE----EEEEECSSCSBSS-------------SCHHHHHHHHTTCCSSCEEEEEESGG
T ss_pred HHHHHHHHHHHHHHhCC--cccCC----EEEEEeccCCCcC-------------ccHHHHHHHHcCCCCCceEeehhhhh
Confidence 35788999999999997 44443 5666765443211 135778999999986 888999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhhc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 707 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~ 707 (1005)
++++.||..|+..|++|.++.+||+|++.... .+ + ..+.+..|+|++++||.+-
T Consensus 117 ~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~-----------~~---------~-~~~~~lfGDGA~A~ll~~~----- 170 (388)
T 3v4n_A 117 YGATAGLQLAKNHVALHPDKKVLVVAADIAKY-----------GL---------N-SGGEPTQGAGAVAMLVSSE----- 170 (388)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC-----------CT---------T-CTTGGGCEEEEEEEEEEES-----
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc-----------cC---------C-CCCCCccccceeEEEeecC-----
Confidence 99999999999999999999999999997422 01 1 0124788999999999862
Q ss_pred CCCceEEEEEEe-eeccCCCCCCCCCC--------C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy612 708 DGDPIHAIIRGS-GINYDGKTNGITAP--------N--------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 770 (1005)
Q Consensus 708 ~g~~I~avI~g~-~~~~dG~~~~~~~p--------~--------~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD 770 (1005)
..|...-.++ +...+-. .+..| + .....++++++++++|++++||+|+-.|-..++++-
T Consensus 171 --~~il~~~~~~~~~~~~~~--df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ 246 (388)
T 3v4n_A 171 --PRILALKEDNVMLTQDIY--DFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGK 246 (388)
T ss_dssp --CSSEEECSCCEEEECCCC--SEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHH
T ss_pred --CCceEEeccccccchhcc--ccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHH
Confidence 2333221111 1111110 00111 1 234456789999999999999999999974443211
Q ss_pred HHH---H----HHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHH
Q psy612 771 PVE---I----NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 816 (1005)
Q Consensus 771 ~~E---~----~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~ 816 (1005)
..= + +.+.+.++-... . .-.+=..+||+.+|+=...|..++
T Consensus 247 ka~~ril~~~~~~~~~~l~~~~e---~--~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 247 KALLAKISDQTEAEQERILARYE---E--SIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp HHHHHHSTTSCHHHHHHHHHHHH---H--HTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHhcccHHHHHHhCCCHH---H--HhhHHHhcCchHHHHHHHHHHHHH
Confidence 100 0 122222221100 0 011234679999998766665543
|
| >2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.8e-10 Score=100.45 Aligned_cols=72 Identities=14% Similarity=0.238 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.+.+++.|++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 5 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 77 (79)
T 2l3v_A 5 TAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKA 77 (79)
T ss_dssp HHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 56789999999999998999999999 9999999999999999999999999999999999999999999764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.3e-08 Score=112.27 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=94.0
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-C-----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-K-----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~-----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++||||+|+||+.+++.|+++|..++++.++. . ...+..+.+...+ +.++.+|++|++++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~---- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIK---- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT----
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHh----
Confidence 45799999999999999999999998776665543 1 1111223343333 6788999999988877664
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc------cCC
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------LGD 215 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~------~g~ 215 (1005)
.+|.|||+||... +.+..++.+++.. .....+|| +| ..+. ...
T Consensus 76 ---~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~------~g~v~~~v-~S-~~g~~~~~~~~~~ 124 (307)
T 2gas_A 76 ---QVDIVICAAGRLL--------------------IEDQVKIIKAIKE------AGNVKKFF-PS-EFGLDVDRHDAVE 124 (307)
T ss_dssp ---TCSEEEECSSSSC--------------------GGGHHHHHHHHHH------HCCCSEEE-CS-CCSSCTTSCCCCT
T ss_pred ---CCCEEEECCcccc--------------------cccHHHHHHHHHh------cCCceEEe-ec-ccccCcccccCCC
Confidence 5999999998632 3455566666421 11256776 34 3332 112
Q ss_pred CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
++...| .+|..++.+.+. .++ +++.+..+.+.
T Consensus 125 p~~~~y-~sK~~~e~~~~~---~~i------~~~~lrp~~~~ 156 (307)
T 2gas_A 125 PVRQVF-EEKASIRRVIEA---EGV------PYTYLCCHAFT 156 (307)
T ss_dssp THHHHH-HHHHHHHHHHHH---HTC------CBEEEECCEET
T ss_pred cchhHH-HHHHHHHHHHHH---cCC------CeEEEEcceee
Confidence 335678 999988877653 344 66777766554
|
| >3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.2e-09 Score=97.43 Aligned_cols=73 Identities=25% Similarity=0.317 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
.+.+.|++++++.+++++++|+++.+| .+||+|||.+++|...|+++||++++...+++++|+.+|++|+.++
T Consensus 22 ~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 22 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp CHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 467789999999999999999999999 5999999999999999999999999999999999999999999764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.84 E-value=2.6e-08 Score=110.23 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=96.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHH---HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SII---YKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~---~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++||||+|+||+.+++.|+++|..++++.++.... .+. .+.+.. ..+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~l~~~~~------ 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--LGAKLIEASLDDHQRLVDALK------ 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT--TTCEEECCCSSCHHHHHHHHT------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh--CCeEEEeCCCCCHHHHHHHHh------
Confidence 46799999999999999999999998766665543221 111 222332 347788999999988877664
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccC------CC
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSSAILG------DF 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia~~~g------~~ 216 (1005)
.+|.|||+||... .. .++.++.++.+++. +.. ..+||+ |+...... .+
T Consensus 76 -~~d~vi~~a~~~~-~~---------------~~~~~~~~l~~aa~-------~~g~v~~~v~-S~~g~~~~~~~~~~~p 130 (313)
T 1qyd_A 76 -QVDVVISALAGGV-LS---------------HHILEQLKLVEAIK-------EAGNIKRFLP-SEFGMDPDIMEHALQP 130 (313)
T ss_dssp -TCSEEEECCCCSS-SS---------------TTTTTHHHHHHHHH-------HSCCCSEEEC-SCCSSCTTSCCCCCSS
T ss_pred -CCCEEEECCcccc-ch---------------hhHHHHHHHHHHHH-------hcCCCceEEe-cCCcCCccccccCCCC
Confidence 5899999999754 21 25777777777742 233 567774 43321111 24
Q ss_pred CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 217 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+...| .+|..++.+.+ ..++ +++.+.++.+
T Consensus 131 ~~~~y-~sK~~~e~~~~---~~g~------~~~ilrp~~~ 160 (313)
T 1qyd_A 131 GSITF-IDKRKVRRAIE---AASI------PYTYVSSNMF 160 (313)
T ss_dssp TTHHH-HHHHHHHHHHH---HTTC------CBCEEECCEE
T ss_pred CcchH-HHHHHHHHHHH---hcCC------CeEEEEecee
Confidence 45678 99998887764 3343 5566665544
|
| >2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum} | Back alignment and structure |
|---|
Probab=98.84 E-value=2e-09 Score=95.92 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHh---CCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNIL---NTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L---~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+.+.+.+++.+++.+ ++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++.+|+++|++|+.++.
T Consensus 7 ~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 85 (88)
T 2l4b_A 7 EEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIASKS 85 (88)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHhh
Confidence 356788999999999 8878899999999 79999999999999999999999999999999999999999998754
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3e-08 Score=111.58 Aligned_cols=147 Identities=18% Similarity=0.139 Sum_probs=100.3
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHH---HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII---YKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~---~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++|||||+|.||+.+++.|+++|..++++.++.....+. .+.+.. ..+.++.+|++|.+++.+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED--KGAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh--CCcEEEEeecCCHHHHHHHHhhC-----
Confidence 46799999999999999999999997766666554222222 223333 35778999999999998888652
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----CCCChh
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----DFGSCD 220 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g----~~g~~~ 220 (1005)
.+|.|||+||.. |+.++.++.+++... ....+||. |+...... ......
T Consensus 83 ~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~------g~v~~~v~-S~~g~~~~e~~~~~p~~~ 135 (346)
T 3i6i_A 83 EIDIVVSTVGGE--------------------SILDQIALVKAMKAV------GTIKRFLP-SEFGHDVNRADPVEPGLN 135 (346)
T ss_dssp TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH------CCCSEEEC-SCCSSCTTTCCCCTTHHH
T ss_pred CCCEEEECCchh--------------------hHHHHHHHHHHHHHc------CCceEEee-cccCCCCCccCcCCCcch
Confidence 699999999852 677888888885432 22556764 44322111 123467
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
|+.+|..++.+.+. .++ +++.+..+.+.
T Consensus 136 y~~sK~~~e~~l~~---~g~------~~tivrpg~~~ 163 (346)
T 3i6i_A 136 MYREKRRVRQLVEE---SGI------PFTYICCNSIA 163 (346)
T ss_dssp HHHHHHHHHHHHHH---TTC------CBEEEECCEES
T ss_pred HHHHHHHHHHHHHH---cCC------CEEEEEecccc
Confidence 99999998877653 344 66777755443
|
| >2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A | Back alignment and structure |
|---|
Probab=98.83 E-value=3.1e-09 Score=97.21 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccc------c-----ccCCCHHHHHHH
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSI------F-----FSYSTLERLITY 404 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~------l-----f~~~Ti~~La~~ 404 (1005)
+.+.+++.+++.+++++++|+++.+| .+||+|||.+++|...|+++||++++... + |+|||+++|++|
T Consensus 4 i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~~ 83 (101)
T 2kw2_A 4 TFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAAR 83 (101)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHHH
Confidence 55679999999999999999999998 79999999999999999999999999877 4 677779999999
Q ss_pred HHHhhhh
Q psy612 405 FIKNHNN 411 (1005)
Q Consensus 405 l~~~~~~ 411 (1005)
|.++...
T Consensus 84 i~~~~~~ 90 (101)
T 2kw2_A 84 IDELVAA 90 (101)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9887643
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-08 Score=114.63 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=84.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcC-----CcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKY-----STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~G-----a~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
++++|||||+|.||..+++.|+++| ..++++.++..... ....++.++.+|++|.+++.++++.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~---- 69 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSP---- 69 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTT----
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhc----
Confidence 3679999999999999999999998 65444444433211 1234578899999999888776643
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEE-------EecCcc
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVC-------YFSSSS 210 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV-------~~SSia 210 (1005)
++++|.|||+||... . +++..+++|+.|+.++.+++.+. .....+|| ++||.+
T Consensus 70 ~~~~d~vih~a~~~~-~---------~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~~v~~~g~~i~~Ss~~ 129 (364)
T 2v6g_A 70 LTDVTHVFYVTWANR-S---------TEQENCEANSKMFRNVLDAVIPN-----CPNLKHISLQTGRKHYMGPFE 129 (364)
T ss_dssp CTTCCEEEECCCCCC-S---------SHHHHHHHHHHHHHHHHHHHTTT-----CTTCCEEEEECCTHHHHCCGG
T ss_pred CCCCCEEEECCCCCc-c---------hHHHHHHHhHHHHHHHHHHHHHh-----ccccceEEeccCceEEEechh
Confidence 335999999999753 1 35678899999999999985321 01355676 677764
|
| >2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.7e-10 Score=102.88 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
+.+.|+++|++++++++++|+++.+|.+||+|||.+++|..+|+++||++++..++++.+|+.+|++|+.++.
T Consensus 27 i~~~l~~ila~~l~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~ 99 (103)
T 2lte_A 27 MEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHR 99 (103)
Confidence 6778999999999999999999999999999999999999999999999999999999999999999997754
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.2e-08 Score=109.62 Aligned_cols=142 Identities=18% Similarity=0.226 Sum_probs=92.4
Q ss_pred EEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
++|||||+|+||+.+++.|.++ |.+++++.++.+.... +. ...+.++.+|++|++++.++++ .+|.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~--~~~v~~~~~D~~d~~~l~~~~~-------~~d~ 68 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW--RGKVSVRQLDYFNQESMVEAFK-------GMDT 68 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG--BTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh--hCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence 4899999999999999999998 7776666555432211 11 2357889999999988876653 6899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
|||+||... .. ..|+.++.++.+++ .....++||++||....... .|..++..
T Consensus 69 vi~~a~~~~-~~--------------~~~~~~~~~l~~aa-------~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~- 121 (289)
T 3e48_A 69 VVFIPSIIH-PS--------------FKRIPEVENLVYAA-------KQSGVAHIIFIGYYADQHNN----PFHMSPYF- 121 (289)
T ss_dssp EEECCCCCC-SH--------------HHHHHHHHHHHHHH-------HHTTCCEEEEEEESCCSTTC----CSTTHHHH-
T ss_pred EEEeCCCCc-cc--------------hhhHHHHHHHHHHH-------HHcCCCEEEEEcccCCCCCC----CCccchhH-
Confidence 999998754 21 12566666666663 33356789999996543222 23222211
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
....+.++..++ +++.+.++.+.
T Consensus 122 ~~~e~~~~~~g~------~~~ilrp~~~~ 144 (289)
T 3e48_A 122 GYASRLLSTSGI------DYTYVRMAMYM 144 (289)
T ss_dssp HHHHHHHHHHCC------EEEEEEECEES
T ss_pred HHHHHHHHHcCC------CEEEEeccccc
Confidence 122233444454 77888776553
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.80 E-value=3.9e-08 Score=111.68 Aligned_cols=129 Identities=16% Similarity=0.164 Sum_probs=96.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecC-CCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV-SDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dv-td~~~v~~~~~~i~~~~g~idg 148 (1005)
++|||||+|.||+.+++.|+++|... ++.+|. +|++++.++++ .+|.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~-------------------------v~~~d~~~d~~~l~~~~~-------~~d~ 49 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHH-------------------------IFEVHRQTKEEELESALL-------KADF 49 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCE-------------------------EEECCTTCCHHHHHHHHH-------HCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCE-------------------------EEEECCCCCHHHHHHHhc-------cCCE
Confidence 58999999999999999999998722 334455 78888887775 3899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCc-EEEEecCcccccCCCCChhhhHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~-~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
|||+||... .. ++...+++|+.++.++.+++ ++.... +||++||..... ...|+.+|..
T Consensus 50 Vih~a~~~~-~~--------~~~~~~~~n~~~~~~l~~a~-------~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~ 109 (369)
T 3st7_A 50 IVHLAGVNR-PE--------HDKEFSLGNVSYLDHVLDIL-------TRNTKKPAILLSSSIQATQ----DNPYGESKLQ 109 (369)
T ss_dssp EEECCCSBC-TT--------CSTTCSSSCCBHHHHHHHHH-------TTCSSCCEEEEEEEGGGGS----CSHHHHHHHH
T ss_pred EEECCcCCC-CC--------CHHHHHHHHHHHHHHHHHHH-------HHhCCCCeEEEeCchhhcC----CCCchHHHHH
Confidence 999999765 21 23446788999999999884 333444 899999987643 6789999999
Q ss_pred HHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 228 QTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 228 l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
.+.+.+....+ ++ +++.+..+..
T Consensus 110 ~E~~~~~~~~~~g~------~~~i~R~~~v 133 (369)
T 3st7_A 110 GEQLLREYAEEYGN------TVYIYRWPNL 133 (369)
T ss_dssp HHHHHHHHHHHHCC------CEEEEEECEE
T ss_pred HHHHHHHHHHHhCC------CEEEEECCce
Confidence 99988876554 33 6666655433
|
| >4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.7e-09 Score=95.76 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
.+.+.|++++++.+++++++|+++.+| .+||+|||.+++|...|+++||++++..++.+.+|+.+|++|+.++
T Consensus 26 ei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~ 99 (101)
T 4dxe_H 26 ENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSL 99 (101)
T ss_dssp THHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHc
Confidence 356789999999999999999999999 9999999999999999999999999999999999999999998653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-08 Score=111.27 Aligned_cols=141 Identities=13% Similarity=0.097 Sum_probs=92.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-C----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-K----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++||||+|+||..+++.|+++|..++++.++. . ...+..+.+... .+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~--~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM--GVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC--CcEEEEecCCCHHHHHHHHc-----
Confidence 45799999999999999999999998766665553 1 111222233333 46788999999988877764
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCC-CcEEEEecCccccc------CC
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSSAIL------GD 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~-~~~iV~~SSia~~~------g~ 215 (1005)
.+|.|||+||... +.++.++.+++.. .. ..+|| + |..+.. ..
T Consensus 77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~-------~g~v~~~v-~-S~~g~~~~~~~~~~ 125 (321)
T 3c1o_A 77 --QVDIVISALPFPM--------------------ISSQIHIINAIKA-------AGNIKRFL-P-SDFGCEEDRIKPLP 125 (321)
T ss_dssp --TCSEEEECCCGGG--------------------SGGGHHHHHHHHH-------HCCCCEEE-C-SCCSSCGGGCCCCH
T ss_pred --CCCEEEECCCccc--------------------hhhHHHHHHHHHH-------hCCccEEe-c-cccccCccccccCC
Confidence 4899999998531 4555666666432 23 56777 3 433311 11
Q ss_pred CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
++...| .+|..++.+.+. .++ +++.|..+.+
T Consensus 126 p~~~~y-~sK~~~e~~~~~---~~~------~~~~lrp~~~ 156 (321)
T 3c1o_A 126 PFESVL-EKKRIIRRAIEA---AAL------PYTYVSANCF 156 (321)
T ss_dssp HHHHHH-HHHHHHHHHHHH---HTC------CBEEEECCEE
T ss_pred CcchHH-HHHHHHHHHHHH---cCC------CeEEEEecee
Confidence 224579 999998887753 333 5566665544
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.4e-08 Score=114.67 Aligned_cols=176 Identities=14% Similarity=0.150 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC---CC-Ccccccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL---KG-PVMAINT 625 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l---~G-ps~~v~t 625 (1005)
...|+.+++.+||++||++++++. .+++|+..+.+.. ...+..|...|+. .+ |++.|..
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~~-------------ps~a~~v~~~L~~lG~~~~~~~dv~~ 135 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIG----RLEVGTETIIDKS-------------KSVKTNLMQLFEESGNTDIEGIDTTN 135 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSCCSCSS-------------SCHHHHHGGGTTTTTCCCCBCCEEES
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCcccC-------------ccHHHHHHHHHhhcCCCCceEEEEcc
Confidence 357899999999999999876654 5666665443211 1246667755554 33 7788999
Q ss_pred cchhHHHHHHHHHHHHhcCC--cCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccc
Q psy612 626 ACSSSLVATHIACQSLRQHE--CDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703 (1005)
Q Consensus 626 aCsSsl~Al~~A~~~l~~G~--~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~ 703 (1005)
||++++.||..|+..|++|. ++.|||.|+++. .|+........|+|++++||.+-.
T Consensus 136 aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------------~~~~~~~~~~fGdGA~A~Ll~~~~ 193 (478)
T 2p8u_A 136 ACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------------VYATGNARPTGGVGAVALLIGPNA 193 (478)
T ss_dssp GGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------------CCCSSTTGGGCEEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------------cccCCCCCCcccceeEEEEEecCC
Confidence 99999999999999999999 999999999952 011122346889999999997532
Q ss_pred hhhcCCCceEEE-EEEeeeccCCCCCCCCCCC---------HH-HH-------H---HHHHHHHH--------HcCCCCC
Q psy612 704 RALSDGDPIHAI-IRGSGINYDGKTNGITAPN---------GI-SQ-------T---ELIKSVYK--------KSNLNPE 754 (1005)
Q Consensus 704 ~A~~~g~~I~av-I~g~~~~~dG~~~~~~~p~---------~~-~q-------~---~~i~~al~--------~agi~~~ 754 (1005)
.. +... +.|+.+. +.. .+..|+ +. .. . +.+++.++ ++|++++
T Consensus 194 ~~------~l~~~~~gs~~~-~~~--d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~~ 264 (478)
T 2p8u_A 194 PL------IFERGLRGTHMQ-HAY--DFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLN 264 (478)
T ss_dssp SE------EECTTCCEEEEC-CCC--SEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCGG
T ss_pred Cc------eEeeccceeccc-chh--heeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCChH
Confidence 10 1000 1222211 111 111111 11 11 1 34556665 6799999
Q ss_pred CccEEEecCCCCCCCCHHH
Q psy612 755 DINYIITHGTGTKLGDPVE 773 (1005)
Q Consensus 755 ~I~yve~hgtgt~~gD~~E 773 (1005)
||+|+-.|-.+.++.+.+.
T Consensus 265 did~~v~H~~~~ki~~~~~ 283 (478)
T 2p8u_A 265 DFGFMIFHSPYCKLVQKSL 283 (478)
T ss_dssp GCSEEEECCSSHHHHHHHH
T ss_pred HcCEEEecCCcHHHHHHHH
Confidence 9999999998887665543
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.1e-08 Score=116.89 Aligned_cols=151 Identities=16% Similarity=0.008 Sum_probs=105.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+++|||||+|.||..+++.|+++|..++++.++.... ..+.+|+.+. ..+.+..+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~---------~~~~l~~~D 203 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNP---------ASDLLDGAD 203 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSC---------CTTTTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccch---------hHHhcCCCC
Confidence 67999999999999999999999998666665544321 1256788652 123456899
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-C-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-D----------- 215 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-~----------- 215 (1005)
+|||+||... .. ..+.+..+..+++|+.|+.++.+++. ......+||++||+..+ | .
T Consensus 204 ~Vih~A~~~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a------~~~~~~r~V~~SS~~vy-g~~~~~~~~~E~~~ 272 (516)
T 3oh8_A 204 VLVHLAGEPI-FG---RFNDSHKEAIRESRVLPTKFLAELVA------ESTQCTTMISASAVGFY-GHDRGDEILTEESE 272 (516)
T ss_dssp EEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH------HCSSCCEEEEEEEGGGG-CSEEEEEEECTTSC
T ss_pred EEEECCCCcc-cc---ccchhHHHHHHHHHHHHHHHHHHHHH------hcCCCCEEEEeCcceEe-cCCCCCCccCCCCC
Confidence 9999999754 22 34556678899999999999999742 23356789999996543 3 1
Q ss_pred CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
.+...|+..|...+.+..+....|+ +++.+..+.+-+
T Consensus 273 ~~~~~y~~~~~~~E~~~~~~~~~gi------~~~ilRp~~v~G 309 (516)
T 3oh8_A 273 SGDDFLAEVCRDWEHATAPASDAGK------RVAFIRTGVALS 309 (516)
T ss_dssp CCSSHHHHHHHHHHHTTHHHHHTTC------EEEEEEECEEEB
T ss_pred CCcChHHHHHHHHHHHHHHHHhCCC------CEEEEEeeEEEC
Confidence 1345677777777777666666655 788887766644
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.2e-08 Score=108.92 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=92.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++|||||+|+||..+++.|+++|..++++.++.....+..+.+...+ +.++.+|++|++++.++++ .+|.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~-------~~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMK-------KVDV 82 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHc-------CCCE
Confidence 579999999999999999999999877666655432333334444444 6778999999988877764 4899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----CCCChhhhH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----DFGSCDYAM 223 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-----~~g~~~Yaa 223 (1005)
|||+|+... +.++.++.+++.. .....+|| +|+...... .++...| .
T Consensus 83 vi~~a~~~~--------------------~~~~~~l~~aa~~------~g~v~~~v-~S~~g~~~~~~~~~~p~~~~y-~ 134 (318)
T 2r6j_A 83 VISALAFPQ--------------------ILDQFKILEAIKV------AGNIKRFL-PSDFGVEEDRINALPPFEALI-E 134 (318)
T ss_dssp EEECCCGGG--------------------STTHHHHHHHHHH------HCCCCEEE-CSCCSSCTTTCCCCHHHHHHH-H
T ss_pred EEECCchhh--------------------hHHHHHHHHHHHh------cCCCCEEE-eeccccCcccccCCCCcchhH-H
Confidence 999998531 3445566665421 11256776 344221111 1123468 8
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
+|..++.+.+ ..++ +++.+..+.+
T Consensus 135 sK~~~e~~~~---~~~~------~~~~lr~~~~ 158 (318)
T 2r6j_A 135 RKRMIRRAIE---EANI------PYTYVSANCF 158 (318)
T ss_dssp HHHHHHHHHH---HTTC------CBEEEECCEE
T ss_pred HHHHHHHHHH---hcCC------CeEEEEccee
Confidence 9988877664 3333 5666665544
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.73 E-value=7.2e-08 Score=106.32 Aligned_cols=143 Identities=13% Similarity=0.130 Sum_probs=92.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch--HHHH---HHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIY---KKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~--~~~~---~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++++||||+|+||..+++.|+++|..++++.++.... .+.. +.+.. ..+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence 46799999999999999999999997766655543221 2222 23333 346788999999998887764
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----CCC
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----DFG 217 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-----~~g 217 (1005)
.+|+|||+||... +.+..++.+++.. .....+|| +|+...... .+.
T Consensus 77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~------~g~v~~~v-~S~~g~~~~~~~~~~p~ 127 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ--------------------IESQVNIIKAIKE------VGTVKRFF-PSEFGNDVDNVHAVEPA 127 (308)
T ss_dssp --TCSEEEECCCGGG--------------------SGGGHHHHHHHHH------HCCCSEEE-CSCCSSCTTSCCCCTTH
T ss_pred --CCCEEEECCcchh--------------------hhhHHHHHHHHHh------cCCCceEe-ecccccCccccccCCcc
Confidence 4899999998532 3455566666422 11256776 454321111 223
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
...| .+|..++.+.+. .++ +++.+..+.+
T Consensus 128 ~~~y-~sK~~~e~~~~~---~~~------~~~~~r~~~~ 156 (308)
T 1qyc_A 128 KSVF-EVKAKVRRAIEA---EGI------PYTYVSSNCF 156 (308)
T ss_dssp HHHH-HHHHHHHHHHHH---HTC------CBEEEECCEE
T ss_pred hhHH-HHHHHHHHHHHh---cCC------CeEEEEecee
Confidence 4568 899988877653 333 5566665544
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=2.8e-08 Score=91.43 Aligned_cols=75 Identities=8% Similarity=0.149 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhCC--CCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccc--cCCCHHHHHHHHHHhh
Q psy612 335 KFIENDIKNHICNILNT--KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKNH 409 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~--~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf--~~~Ti~~La~~l~~~~ 409 (1005)
+.+.+.|+++|++++++ +.++|+++++|+++|+|||.+++|...|+++||++|+..+++ .++|+..|++++....
T Consensus 21 ~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~~~~ 99 (105)
T 2jq4_A 21 GHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL 99 (105)
T ss_dssp --CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHHHHh
Confidence 34667899999998865 478899999999999999999999999999999999999998 8899999999997654
|
| >1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A | Back alignment and structure |
|---|
Probab=98.63 E-value=7e-08 Score=84.18 Aligned_cols=73 Identities=18% Similarity=0.256 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCchhhcC-CchHHHHHHHHHHHhhcCcccCccccc--cCCCHHHHHHHHHHh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKN 408 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG-~DSL~a~el~~~l~~~~g~~l~~~~lf--~~~Ti~~La~~l~~~ 408 (1005)
.+.+.+++.+++.++.++.+++++.+|+++| +|||.+++|...|+++||++++..++. ...|+++|++|+.++
T Consensus 4 ~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 4 AIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp HHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 4667899999999999878899999999999 999999999999999999999999988 899999999998753
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-07 Score=101.09 Aligned_cols=138 Identities=14% Similarity=0.076 Sum_probs=90.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
+++||||+ |.||..+++.|+++|..++++.++..... .+.. ..+.++.+|++|.+ +..+|.
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~--~~~~~~~~D~~d~~------------~~~~d~ 66 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME----AIRA--SGAEPLLWPGEEPS------------LDGVTH 66 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH----HHHH--TTEEEEESSSSCCC------------CTTCCE
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh----hHhh--CCCeEEEecccccc------------cCCCCE
Confidence 67999998 99999999999999986665554433222 2222 34888999999921 567999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 217 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g----------- 217 (1005)
|||+|+... .. .. .+.++.++ +++. .....+||++||... +|...
T Consensus 67 vi~~a~~~~-~~-----~~------------~~~~l~~a----~~~~-~~~~~~~v~~Ss~~v-yg~~~~~~~~E~~~~~ 122 (286)
T 3ius_A 67 LLISTAPDS-GG-----DP------------VLAALGDQ----IAAR-AAQFRWVGYLSTTAV-YGDHDGAWVDETTPLT 122 (286)
T ss_dssp EEECCCCBT-TB-----CH------------HHHHHHHH----HHHT-GGGCSEEEEEEEGGG-GCCCTTCEECTTSCCC
T ss_pred EEECCCccc-cc-----cH------------HHHHHHHH----HHhh-cCCceEEEEeeccee-cCCCCCCCcCCCCCCC
Confidence 999999765 22 00 01233333 2211 134578999999753 33221
Q ss_pred -ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCccc
Q psy612 218 -SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 218 -~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 257 (1005)
...|+.+|...+.+.+.. .++ +++.+..+.+-
T Consensus 123 p~~~Y~~sK~~~E~~~~~~--~~~------~~~ilRp~~v~ 155 (286)
T 3ius_A 123 PTAARGRWRVMAEQQWQAV--PNL------PLHVFRLAGIY 155 (286)
T ss_dssp CCSHHHHHHHHHHHHHHHS--TTC------CEEEEEECEEE
T ss_pred CCCHHHHHHHHHHHHHHhh--cCC------CEEEEeccceE
Confidence 346999999999888765 333 66666665443
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=98.61 E-value=2.5e-08 Score=111.47 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..++..|.++|+++|+++ .|+.+++|+++|+|||++++|.++|++.||++++...+|++|||++|+++|.++
T Consensus 10 ~~~e~~l~~~~~~~l~~~--~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 10 AGSETIIAAAFSSLLGCD--VQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp TTHHHHHHHHHHHHHTC---CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhh
Confidence 356788999999999996 499999999999999999999999999999999999999999999999999653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6.6e-09 Score=113.99 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=75.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+++++|||||+||||+++++.|+++|++ |+++.|+ +..+++.+++... ..+.++.+|+++++++.++++ .
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~ 188 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------G 188 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------h
Confidence 5789999999999999999999999987 6666665 3344455555432 135678899999988776553 3
Q ss_pred ccEEEEcCcccCccchhccCCH-HHHHHHHhhhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANY-KNFYSVLSSKISGTI 182 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~-~~~~~~l~~kv~g~~ 182 (1005)
+|+||||||+.....++.+.+. +.|+.++++|+.+.+
T Consensus 189 ~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 189 AHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp CSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred CCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 7999999986431223333333 556667777777755
|
| >3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.8e-07 Score=84.89 Aligned_cols=76 Identities=14% Similarity=0.270 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCch------hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNL------ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l------~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
...+...|++++++.++ +.++|+++.+| .+||+|||..++|...|+++||++|+...+.+..|+++|++|+.+
T Consensus 17 ~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 95 (107)
T 3ce7_A 17 INAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFVVS 95 (107)
T ss_dssp HHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHHHH
Confidence 44577889999999999 88999999999 589999999999999999999999999999999999999999987
Q ss_pred hhh
Q psy612 408 NHN 410 (1005)
Q Consensus 408 ~~~ 410 (1005)
+..
T Consensus 96 ~~~ 98 (107)
T 3ce7_A 96 ERA 98 (107)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.2e-07 Score=83.36 Aligned_cols=73 Identities=15% Similarity=0.259 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhCCC--CcccccCCchh-hcCC-chHHHHHHHHHHHhhcCcccCccccc--cCCCHHHHHHHHHHhh
Q psy612 337 IENDIKNHICNILNTK--KSEIYKNKNLA-DYGF-DSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKNH 409 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~--~~~i~~~~~l~-elG~-DSL~a~el~~~l~~~~g~~l~~~~lf--~~~Ti~~La~~l~~~~ 409 (1005)
+.+.|++.+++.++++ +++|+++.+|. ++|+ |||..++|...|+++||++++..++. ...|+.+|++|+.++.
T Consensus 25 i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~ 103 (105)
T 2lki_A 25 HLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 103 (105)
T ss_dssp THHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHh
Confidence 4567899999999998 78999999998 5999 99999999999999999999998854 6899999999998753
|
| >1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=3.1e-08 Score=88.89 Aligned_cols=73 Identities=18% Similarity=0.299 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCC--------CCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccC---ccccccCCCHHHHHHHH
Q psy612 337 IENDIKNHICNILNT--------KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIM---PSIFFSYSTLERLITYF 405 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~--------~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~---~~~lf~~~Ti~~La~~l 405 (1005)
+.+.++++++++++. ++++|+++.+|.+||+|||.+++|...|+++||++++ ...+++.+|+++|++|+
T Consensus 5 i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~i 84 (92)
T 1fh1_A 5 LTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAV 84 (92)
T ss_dssp CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTHHH
T ss_pred HHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHHH
Confidence 345688888888884 4458999999999999999999999999999999999 78899999999999999
Q ss_pred HHhh
Q psy612 406 IKNH 409 (1005)
Q Consensus 406 ~~~~ 409 (1005)
.++.
T Consensus 85 ~~~~ 88 (92)
T 1fh1_A 85 RGLL 88 (92)
T ss_dssp HC--
T ss_pred HHHh
Confidence 8654
|
| >2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=78.34 Aligned_cols=75 Identities=9% Similarity=0.119 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCc-hhhcCCchHHHHHHHHHHHhhcCcccCcc-ccccCCCHHHHHHHHHHhhh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKN-LADYGFDSISLAEFSRILSKFYSLDIMPS-IFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~-l~elG~DSL~a~el~~~l~~~~g~~l~~~-~lf~~~Ti~~La~~l~~~~~ 410 (1005)
.+.+.+++++++.+++++++|.++.+ +-+||+|||..+||...++++||++++.. .-|...|++++++||.+...
T Consensus 14 ~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~~e~~~~~TV~d~vdyI~~~~~ 90 (102)
T 2l9f_A 14 GALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEALEARER 90 (102)
T ss_dssp CHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSSCSCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCccHHHHHHccHHHHHHHHHHhhc
Confidence 46778999999999999999999999 57899999999999999999999998643 33566999999999987543
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.8e-07 Score=107.57 Aligned_cols=72 Identities=17% Similarity=0.234 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
..++..|.++|+++|+++ +|+.+++|+++|+|||.++++..++++.||++|+..++|++|||.+|++++.+.
T Consensus 9 ~~~e~~l~~iw~~vL~~~--~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 9 SVWEARLAQVWEQVLNVP--QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp SHHHHHHHHHHHHHHTCS--CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 456788999999999995 699999999999999999999999999999999999999999999999998754
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=91.61 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=60.7
Q ss_pred CCCEEEEECC----------------hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg----------------~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
.++++||||| +||||.++|+.|+++|+.++++.++.... . ..| + ..+|+++.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~------~-~~g--~--~~~dv~~~~ 75 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------T-PPF--V--KRVDVMTAL 75 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------C-CTT--E--EEEECCSHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc------c-CCC--C--eEEccCcHH
Confidence 6899999999 69999999999999999877765554211 0 112 2 357888865
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchh
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNI 162 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~ 162 (1005)
+ +++.+.+.+|++|++|||||+.. ..++
T Consensus 76 ~---~~~~v~~~~~~~Dili~~Aav~d-~~p~ 103 (226)
T 1u7z_A 76 E---MEAAVNASVQQQNIFIGCAAVAD-YRAA 103 (226)
T ss_dssp H---HHHHHHHHGGGCSEEEECCBCCS-EEES
T ss_pred H---HHHHHHHhcCCCCEEEECCcccC-CCCc
Confidence 5 45666777899999999999875 4443
|
| >2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.25 E-value=6.5e-07 Score=83.02 Aligned_cols=71 Identities=21% Similarity=0.175 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCch-hhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l-~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+.+.+.|++++++.++ |+++.+| .++|+|||..++|...|+++||++|+..++.+..|+++|++||.++..
T Consensus 29 ~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l~ 100 (113)
T 2cgq_A 29 EAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFP 100 (113)
T ss_dssp HHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHHh
Confidence 3456667777777666 8889999 799999999999999999999999999999999999999999987654
|
| >2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.22 E-value=6.6e-07 Score=97.93 Aligned_cols=67 Identities=21% Similarity=0.349 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHH
Q psy612 338 ENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFI 406 (1005)
Q Consensus 338 ~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~ 406 (1005)
.+++++.++++| +++++|+.+++|++||+||+.+++|..++++. |++++.+++|++|||++++++|.
T Consensus 217 ~dwlr~~va~~L-~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 217 KAALREVILPLL-DESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHHGGGC-CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 357888999999 98889999999999999999999999999998 99999999999999999999986
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.19 E-value=3e-06 Score=88.52 Aligned_cols=93 Identities=12% Similarity=0.228 Sum_probs=65.1
Q ss_pred CCCEEEEECC----------------hhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy612 67 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 67 ~~~~~lITGg----------------~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 130 (1005)
.++++||||| +|++|.++|+.|+++|+.++++.++..... .....+. ..|+.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~--~~~v~s~- 71 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLS--IREITNT- 71 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEE--EEECCSH-
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeE--EEEHhHH-
Confidence 5899999999 889999999999999998777766543211 0011232 3456554
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHH
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYS 172 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~ 172 (1005)
.++++.+.+.++++|++||||++.. ..+....+.+.+..
T Consensus 72 --~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~~ 110 (232)
T 2gk4_A 72 --KDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQA 110 (232)
T ss_dssp --HHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHHH
T ss_pred --HHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhhc
Confidence 4455666667789999999999987 66666555555543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.1e-07 Score=110.47 Aligned_cols=73 Identities=15% Similarity=0.345 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
...++..|.++|+++|+++ +|+.+++||++|+|||++++|..+|++ ||++|+..++|++|||++||++|.+..
T Consensus 43 ~~~~e~~l~~~w~~~l~~~--~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 43 SNEIEQTFVDVFGEVLKQN--DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 3456788999999999986 799999999999999999999999986 999999999999999999999997643
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.3e-06 Score=86.59 Aligned_cols=78 Identities=13% Similarity=-0.031 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCch---HHHHHHHHhCCCcEEEEEecCCCH--HHHHHHHHHHHhhcCCccEEEEcC
Q psy612 79 RLGMLFSDYLINKYSTNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDK--LKMISEINSIINNIGPIDGVLHIA 153 (1005)
Q Consensus 79 GIG~aiA~~La~~Ga~~vil~~r~~~~---~~~~~~l~~~g~~v~~~~~Dvtd~--~~v~~~~~~i~~~~g~idgvIh~A 153 (1005)
-++.++++.|++.|++++|..+..... .+..+.+++.|.++..+++|++++ ++++++++.+.+.+|+ |++||||
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnA 105 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCL 105 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECS
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECC
Confidence 367899999999999988766544322 124566777898999999999999 9999999999998999 9999999
Q ss_pred cccC
Q psy612 154 GISG 157 (1005)
Q Consensus 154 G~~~ 157 (1005)
|...
T Consensus 106 gg~r 109 (157)
T 3gxh_A 106 ANYR 109 (157)
T ss_dssp BSHH
T ss_pred CCCC
Confidence 9754
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3.6e-07 Score=111.15 Aligned_cols=72 Identities=7% Similarity=-0.008 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHh-hcCcccCccccccCCCHHHHHHHHHHh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSK-FYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~-~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
...+..|.++|+++|+++ .++.+++||++|+|||++++|.++|++ .||++|+..++|++|||++||++|.+.
T Consensus 523 ~~~e~~l~~iw~~vL~~~--~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 523 DPDQRGCAQLWSELLGCE--VGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 345677999999999984 588899999999999999999999999 899999999999999999999999654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.02 E-value=3.7e-06 Score=111.01 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHH
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 407 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~ 407 (1005)
...++..|.++|+++|+++ .|+.+++||++|+|||++++|.++|++.||++++...+|++|||.+||++|..
T Consensus 970 ~~~~e~~l~~~~~~vL~~~--~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~ 1041 (1304)
T 2vsq_A 970 RNEMEETIAQIWSEVLGRK--QIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKN 1041 (1304)
T ss_dssp SSHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCC--ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHh
Confidence 3457889999999999984 69999999999999999999999999999999999999999999999999864
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.9e-06 Score=103.21 Aligned_cols=69 Identities=20% Similarity=0.354 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 338 ENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 338 ~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+..+.+.|+++|+. .+++..+++||++|+|||.+++|.++|++ ++.+|+..++|++|||++|+++|.++
T Consensus 547 ~~~l~~~~~~~l~~-~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~ 615 (617)
T 3rg2_A 547 KAALREVILPLLDE-SDEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSRE 615 (617)
T ss_dssp HHHHHHHHGGGSCT-TCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhcc-CCCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhh
Confidence 45688899999874 34688899999999999999999999987 68899999999999999999998654
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.99 E-value=4.9e-05 Score=83.15 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=74.5
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.+|||||+|=||..+++.|.++|..++++.++... ..+ ..| .+ ..+.+..+|.|
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~------~~~~l~~~d~v 55 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----EL------AASGLPSCDAA 55 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HH------HHHCCCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hh------hHhhccCCCEE
Confidence 38999999999999999999999877776654321 111 111 11 12335679999
Q ss_pred EEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 150 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 150 Ih~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
||.||... .......+.+..+..++.|+.++.+|.+++.. ...+...||+.||+.
T Consensus 56 ihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~-----~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 56 VNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITK-----APQPPKAWVLVTGVA 110 (298)
T ss_dssp EECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH-----CSSCCSEEEEEEEGG
T ss_pred EEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH-----hCCCceEEEEEeeee
Confidence 99998654 34444557777888999999999999887532 223344566666654
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.95 E-value=9.4e-06 Score=94.75 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCC----ccccccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP----VMAINTA 626 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gp----s~~v~ta 626 (1005)
.-|..+++..||+++|++++++. -+++|+...++... ..+..|...|++.|. ++=+..|
T Consensus 55 ~~ma~~Aa~~al~~a~i~~~~Id----~ii~aT~t~~~~~p-------------s~a~~v~~~l~~~g~~~~~a~D~~~a 117 (460)
T 2wya_A 55 NSLCLTVVQRLMERIQLPWDSVG----RLEVGTETIIDKSK-------------AVKTVLMELFQDSGNTDIEGIDTTNA 117 (460)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEE----EEEEECSCCSCSSS-------------CHHHHHGGGTGGGTCCCCBCCEEESG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCCC-------------chHHHHHHHHhccCCCCeeEechhhh
Confidence 35899999999999999887654 46777766543211 246678888887663 4557889
Q ss_pred chhHHHHHHHHHHHHhcCCcC--EEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 627 CSSSLVATHIACQSLRQHECD--TAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d--~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
|++++.||..|.+.|++|..+ .+|+++.++.. |.........|.|++++++.+-
T Consensus 118 C~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~~----------------------~~d~~~~~~~GdGA~A~l~~~~ 173 (460)
T 2wya_A 118 CYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV----------------------YPSGNARPTGGAGAVAMLIGPK 173 (460)
T ss_dssp GGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC----------------------CCSSTTGGGCEEEEEEEEEESS
T ss_pred hhhHHHHHHHHHHHHHhccccceEEEEEeccccc----------------------cccccccccCcchHHhhhcccC
Confidence 999999999999999999865 45555544311 1112233456999999998753
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.72 E-value=8.3e-05 Score=68.86 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=56.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++.++|+|+ |++|+.+++.|.++|...|+++.|++. ..+.+... .+.++.+|+++.+++.+++ ..+|
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~---~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d 71 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA---ALAVLNRM--GVATKQVDAKDEAGLAKAL-------GGFD 71 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH---HHHHHHTT--TCEEEECCTTCHHHHHHHT-------TTCS
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH---HHHHHHhC--CCcEEEecCCCHHHHHHHH-------cCCC
Confidence 568999999 999999999999999556777777642 22333333 3566889999988776655 2689
Q ss_pred EEEEcCcc
Q psy612 148 GVLHIAGI 155 (1005)
Q Consensus 148 gvIh~AG~ 155 (1005)
.|||+++.
T Consensus 72 ~vi~~~~~ 79 (118)
T 3ic5_A 72 AVISAAPF 79 (118)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999963
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00015 Score=74.16 Aligned_cols=82 Identities=16% Similarity=0.025 Sum_probs=56.2
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++|||||+||||+++++.+...|++ |+.+.+++. ..+.+++.|... .+|.++.+..+.+.+... .
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~~~~---~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~--~ 105 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGAR-IYTTAGSDA---KREMLSRLGVEY---VGDSRSVDFADEILELTD--G 105 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCE-EEEEESSHH---HHHHHHTTCCSE---EEETTCSTHHHHHHHHTT--T
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHcCCCE---EeeCCcHHHHHHHHHHhC--C
Confidence 4567899999999999999999999999986 444555432 223445556542 258777654444433322 1
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
+++|+||+|+|
T Consensus 106 ~~~D~vi~~~g 116 (198)
T 1pqw_A 106 YGVDVVLNSLA 116 (198)
T ss_dssp CCEEEEEECCC
T ss_pred CCCeEEEECCc
Confidence 36999999997
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00018 Score=82.47 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=64.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCC--cEEEEecCCC-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga--~~vil~~r~~-~~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+.++|+|+ ||||+++++.|+++|. ..|++.+|+. ..+++.+++... +.++..+.+|++|.+++.++++..
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 46889998 8999999999999985 3677777764 444555555543 246788999999999999998775
Q ss_pred CccEEEEcCccc
Q psy612 145 PIDGVLHIAGIS 156 (1005)
Q Consensus 145 ~idgvIh~AG~~ 156 (1005)
++|+||||||..
T Consensus 76 ~~DvVin~ag~~ 87 (405)
T 4ina_A 76 KPQIVLNIALPY 87 (405)
T ss_dssp CCSEEEECSCGG
T ss_pred CCCEEEECCCcc
Confidence 699999999853
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=81.58 Aligned_cols=147 Identities=12% Similarity=-0.035 Sum_probs=91.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCC------cEEEEecCCCc---hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSKL---NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga------~~vil~~r~~~---~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
..++||||+|.||..++..|+++|. ..|+++.+.+. .......+......+ + .|+++.+++.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a---- 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVA---- 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHH----
Confidence 4699999999999999999999885 25666666432 111222343322121 2 466553333322
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-------
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------- 212 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~------- 212 (1005)
+...|.|||.||... . + ..+. ...+..|+.++.++.+++..+ . .+..+|+++||....
T Consensus 78 ---~~~~D~Vih~Ag~~~-~-~--~~~~---~~~~~~Nv~~t~~l~~a~~~~----~-~~~~~vvv~snp~~~~~~~~~~ 142 (327)
T 1y7t_A 78 ---FKDADYALLVGAAPR-K-A--GMER---RDLLQVNGKIFTEQGRALAEV----A-KKDVKVLVVGNPANTNALIAYK 142 (327)
T ss_dssp ---TTTCSEEEECCCCCC-C-T--TCCH---HHHHHHHHHHHHHHHHHHHHH----S-CTTCEEEECSSSHHHHHHHHHH
T ss_pred ---hCCCCEEEECCCcCC-C-C--CCCH---HHHHHHHHHHHHHHHHHHHhh----c-CCCeEEEEeCCchhhhHHHHHH
Confidence 236899999999865 2 1 2333 457899999999999886432 1 133478888875421
Q ss_pred -c-CCCCChhhhHHHHHHHHHHHHHHh
Q psy612 213 -L-GDFGSCDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 213 -~-g~~g~~~Yaaana~l~~la~~~~~ 237 (1005)
. +.+....|+.+|...+.+.....+
T Consensus 143 ~~~~~~p~~~yg~tkl~~er~~~~~a~ 169 (327)
T 1y7t_A 143 NAPGLNPRNFTAMTRLDHNRAKAQLAK 169 (327)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHH
T ss_pred HcCCCChhheeccchHHHHHHHHHHHH
Confidence 1 223345699988877776655443
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0002 Score=79.82 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=58.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||||++||||+++++.+...|++ |+++.+++. ..+.+++.|... .+|.++.+++.+.+.++..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~~~~---~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~-- 212 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCK-VVGAAGSDE---KIAYLKQIGFDA---AFNYKTVNSLEEALKKASP-- 212 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHTTCSE---EEETTSCSCHHHHHHHHCT--
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHhcCCcE---EEecCCHHHHHHHHHHHhC--
Confidence 4678999999999999999999999999995 555555432 223334556542 3588774455555555433
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
+++|+||+|+|
T Consensus 213 ~~~d~vi~~~g 223 (333)
T 1v3u_A 213 DGYDCYFDNVG 223 (333)
T ss_dssp TCEEEEEESSC
T ss_pred CCCeEEEECCC
Confidence 58999999998
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00074 Score=75.64 Aligned_cols=83 Identities=13% Similarity=0.217 Sum_probs=59.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+|++||||+++++.+...|++ |+.+.+++... +.+++.|... .+|+++.+++.+.+.++...
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-V~~~~~~~~~~---~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~~- 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYR-VLGIDGGEGKE---ELFRSIGGEV---FIDFTKEKDIVGAVLKATDG- 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSTTHH---HHHHHTTCCE---EEETTTCSCHHHHHHHHHTS-
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCc-EEEEcCCHHHH---HHHHHcCCce---EEecCccHhHHHHHHHHhCC-
Confidence 4678999999999999999999999999985 55555544322 2334456542 34888655666666665443
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
++|.||+++|.
T Consensus 238 -~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 -GAHGVINVSVS 248 (347)
T ss_dssp -CEEEEEECSSC
T ss_pred -CCCEEEECCCc
Confidence 79999999984
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0012 Score=73.14 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=56.7
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++|||||+||||+++++.+...|++ |+.+.+++.. .+.+++.|... .+|.++.+..+++.+...
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-V~~~~~~~~~---~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~-- 206 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQK---AQSALKAGAWQ---VINYREEDLVERLKEITG-- 206 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEEESSHHH---HHHHHHHTCSE---EEETTTSCHHHHHHHHTT--
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHcCCCE---EEECCCccHHHHHHHHhC--
Confidence 35678999999999999999999999999985 5555555322 22333446543 247776554444443322
Q ss_pred cCCccEEEEcCc
Q psy612 143 IGPIDGVLHIAG 154 (1005)
Q Consensus 143 ~g~idgvIh~AG 154 (1005)
..++|.+|+|+|
T Consensus 207 ~~~~D~vi~~~g 218 (327)
T 1qor_A 207 GKKVRVVYDSVG 218 (327)
T ss_dssp TCCEEEEEECSC
T ss_pred CCCceEEEECCc
Confidence 136999999998
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00011 Score=87.07 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=57.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-- 143 (1005)
.+++++|||| ||+|+++++.|+++|+ .|+++.|+. ..+++.++ .+.++. ++.| + +.+
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~---~~~~~~----~~~d---l--------~~~~~ 422 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEA---IGGKAL----SLTD---L--------DNYHP 422 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHH---TTC-CE----ETTT---T--------TTC--
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHH---cCCcee----eHHH---h--------hhccc
Confidence 4688999999 5999999999999999 566666663 22333322 233322 2222 1 222
Q ss_pred CCccEEEEcCcccCc----cchhccCCHHHHHHHHhhhhhHH
Q psy612 144 GPIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGT 181 (1005)
Q Consensus 144 g~idgvIh~AG~~~~----~~~~~~~t~~~~~~~l~~kv~g~ 181 (1005)
+.+|+||||+|+... ..++.+.+.+.|..++++|+.+.
T Consensus 423 ~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 423 EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred cCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 359999999997531 13455555666667777776654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0013 Score=76.22 Aligned_cols=78 Identities=21% Similarity=0.157 Sum_probs=56.1
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++.++|+| +|++|+++++.|++.|.. |++..|+.. ..+++.+.-..+..+.+|++|.+++.++++ .+|
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~-V~v~~R~~~---~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-------~~D 70 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIK-VTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHD 70 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCE-EEEEESSHH---HHHHTTTTCTTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCE-EEEEECCHH---HHHHHHHhcCCceEEEeecCCHHHHHHHHc-------CCc
Confidence 57899997 799999999999999875 666666531 222332221246788999999888776652 699
Q ss_pred EEEEcCcccC
Q psy612 148 GVLHIAGISG 157 (1005)
Q Consensus 148 gvIh~AG~~~ 157 (1005)
+||||++...
T Consensus 71 vVIn~a~~~~ 80 (450)
T 1ff9_A 71 LVISLIPYTF 80 (450)
T ss_dssp EEEECCC--C
T ss_pred EEEECCcccc
Confidence 9999998643
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=72.77 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=56.9
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++|||||+||||+++++.+...|++ |+.+.+++.. .+.+++.|... .+|.++.+..+++.+.. .
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-Vi~~~~~~~~---~~~~~~~g~~~---~~d~~~~~~~~~i~~~~-~- 211 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT-VIGTVSTEEK---AETARKLGCHH---TINYSTQDFAEVVREIT-G- 211 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHHTCSE---EEETTTSCHHHHHHHHH-T-
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHcCCCE---EEECCCHHHHHHHHHHh-C-
Confidence 35678999999999999999999999999985 5555555322 22333446543 34777654444443332 1
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
..++|.+|+|+|.
T Consensus 212 ~~~~d~vi~~~g~ 224 (333)
T 1wly_A 212 GKGVDVVYDSIGK 224 (333)
T ss_dssp TCCEEEEEECSCT
T ss_pred CCCCeEEEECCcH
Confidence 1369999999985
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0012 Score=73.63 Aligned_cols=83 Identities=19% Similarity=0.197 Sum_probs=57.7
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+++++++||+|++||||+.+++.+...|++ |+.+.+++ +..+.++ +.|... .+|.++.+++.+.+.++..
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~-V~~~~~~~---~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~- 223 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCY-VVGSAGSK---EKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP- 223 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT-
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC-
Confidence 4678999999999999999999999999985 55555543 2233344 456543 2477664444555554432
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
+++|.||+|+|.
T Consensus 224 -~~~d~vi~~~g~ 235 (345)
T 2j3h_A 224 -NGIDIYFENVGG 235 (345)
T ss_dssp -TCEEEEEESSCH
T ss_pred -CCCcEEEECCCH
Confidence 579999999974
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00022 Score=77.73 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=52.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++|||++ |+|+++++.|+++| .|++..|+. ..+++.+++...+.....+.+|+++. .+.+++
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~ 193 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDG 193 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTT
T ss_pred CCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCC
Confidence 57899999986 99999999999999 666666663 33445555543210000123455541 356789
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
+|+||||+|+..
T Consensus 194 ~DilVn~ag~~~ 205 (287)
T 1nvt_A 194 VDIIINATPIGM 205 (287)
T ss_dssp CCEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 999999999754
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0017 Score=72.87 Aligned_cols=82 Identities=12% Similarity=0.112 Sum_probs=55.5
Q ss_pred cccCC--CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 64 YIKQG--GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 64 ~~~~~--~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
.++++ +++||||++||||+.+++.+...|+..|+.+.+++ +..+.+++ .|... .+|.++.+ +.+.+.+..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~---~~~~~~~~~~g~~~---~~d~~~~~-~~~~~~~~~ 227 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH---EKCILLTSELGFDA---AINYKKDN-VAEQLRESC 227 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH---HHHHHHHHTSCCSE---EEETTTSC-HHHHHHHHC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH---HHHHHHHHHcCCce---EEecCchH-HHHHHHHhc
Confidence 35678 99999999999999999999999995566555553 22233333 56542 35777643 333333332
Q ss_pred hhcCCccEEEEcCc
Q psy612 141 NNIGPIDGVLHIAG 154 (1005)
Q Consensus 141 ~~~g~idgvIh~AG 154 (1005)
. +++|++|+|+|
T Consensus 228 ~--~~~d~vi~~~G 239 (357)
T 2zb4_A 228 P--AGVDVYFDNVG 239 (357)
T ss_dssp T--TCEEEEEESCC
T ss_pred C--CCCCEEEECCC
Confidence 2 27999999998
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.003 Score=70.84 Aligned_cols=84 Identities=11% Similarity=0.104 Sum_probs=56.7
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+|++||||+.+++.+...|++ |+.+.+++.. .+.+++.|... .+|.++.+..+++.+.. .
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~-Vi~~~~~~~~---~~~~~~~ga~~---~~d~~~~~~~~~~~~~~-~- 236 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAYGLK-ILGTAGTEEG---QKIVLQNGAHE---VFNHREVNYIDKIKKYV-G- 236 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHTTCSE---EEETTSTTHHHHHHHHH-C-
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChhH---HHHHHHcCCCE---EEeCCCchHHHHHHHHc-C-
Confidence 35678999999999999999999999999985 5555554322 22345556542 35777654443333222 1
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
..++|.||+|+|.
T Consensus 237 ~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 237 EKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEEESCHH
T ss_pred CCCcEEEEECCCh
Confidence 2379999999973
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0024 Score=71.64 Aligned_cols=84 Identities=12% Similarity=0.091 Sum_probs=56.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+||+||||+.+++.+...|++ |+.+.+++.. .+.+++.|... .+|.++.+..+++.+.. .
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-Vi~~~~~~~~---~~~~~~~g~~~---~~~~~~~~~~~~~~~~~-~- 228 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAI-PLVTAGSQKK---LQMAEKLGAAA---GFNYKKEDFSEATLKFT-K- 228 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHTCSE---EEETTTSCHHHHHHHHT-T-
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHcCCcE---EEecCChHHHHHHHHHh-c-
Confidence 34678999999999999999999999999985 5555555322 22334446542 35776654443333322 1
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
.+++|.+|+|+|.
T Consensus 229 ~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 229 GAGVNLILDCIGG 241 (354)
T ss_dssp TSCEEEEEESSCG
T ss_pred CCCceEEEECCCc
Confidence 1369999999984
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0032 Score=69.97 Aligned_cols=83 Identities=16% Similarity=0.091 Sum_probs=56.5
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
..+++++++||+|++||||+.+++.+...|++ |+.+.+++ +..+.+ ++.|.... .|.++.+..+.+. +..
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~---~~~~~~~~~~g~~~~---~~~~~~~~~~~~~-~~~- 215 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKGCR-VVGIAGGA---EKCRFLVEELGFDGA---IDYKNEDLAAGLK-REC- 215 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHTTCCSEE---EETTTSCHHHHHH-HHC-
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHcCCCEE---EECCCHHHHHHHH-Hhc-
Confidence 34678999999999999999999999999995 55555543 223344 56676432 4666644333333 222
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
.+++|.+|+|+|.
T Consensus 216 -~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 216 -PKGIDVFFDNVGG 228 (336)
T ss_dssp -TTCEEEEEESSCH
T ss_pred -CCCceEEEECCCc
Confidence 2479999999984
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0047 Score=69.00 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=54.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~-Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+++++++||||++||||+.+++.+... |++ |+.+.+++... +.+++.|.... +|.++.+..++ +.++...
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~-Vi~~~~~~~~~---~~~~~~g~~~~---~~~~~~~~~~~-~~~~~~~ 238 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAV---EAAKRAGADYV---INASMQDPLAE-IRRITES 238 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCE-EEEEESSHHHH---HHHHHHTCSEE---EETTTSCHHHH-HHHHTTT
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCe-EEEEcCCHHHH---HHHHHhCCCEE---ecCCCccHHHH-HHHHhcC
Confidence 4678999999999999999999999999 986 55555543222 23344465432 46666433332 2222221
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
+++|.||+|+|.
T Consensus 239 -~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 -KGVDAVIDLNNS 250 (347)
T ss_dssp -SCEEEEEESCCC
T ss_pred -CCceEEEECCCC
Confidence 589999999985
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.005 Score=71.53 Aligned_cols=78 Identities=21% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.++.++|+|+ ||+|+++++.|++.+...|++..|+.. ..+++.+. ..+..+.+|++|.+++.++++ .+
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~---ka~~la~~-~~~~~~~~D~~d~~~l~~~l~-------~~ 89 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLA---NAQALAKP-SGSKAISLDVTDDSALDKVLA-------DN 89 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHH---HHHHHHGG-GTCEEEECCTTCHHHHHHHHH-------TS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHH---HHHHHHHh-cCCcEEEEecCCHHHHHHHHc-------CC
Confidence 3578999997 999999999999985456777777642 22233322 134567899999888776653 58
Q ss_pred cEEEEcCccc
Q psy612 147 DGVLHIAGIS 156 (1005)
Q Consensus 147 dgvIh~AG~~ 156 (1005)
|+|||+++..
T Consensus 90 DvVIn~tp~~ 99 (467)
T 2axq_A 90 DVVISLIPYT 99 (467)
T ss_dssp SEEEECSCGG
T ss_pred CEEEECCchh
Confidence 9999999864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0053 Score=71.15 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=59.8
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEe--cCC---------CHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQV--DVS---------DKLK 131 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~--Dvt---------d~~~ 131 (1005)
..+++++++||+|++||||+..++.+...|++++++. +++ +..+.+++.|....+... |+. +.++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~-~~~---~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV-SSA---QKEAAVRALGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSH---HHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe-CCH---HHHHHHHhcCCCEEEecccccccccccccccccchh
Confidence 4577899999999999999999999988999766665 433 233445566765433222 221 1234
Q ss_pred HHHHHHHHHhhcC-CccEEEEcCcc
Q psy612 132 MISEINSIINNIG-PIDGVLHIAGI 155 (1005)
Q Consensus 132 v~~~~~~i~~~~g-~idgvIh~AG~ 155 (1005)
+..+.+.+.+..| .+|+||+++|.
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G~ 316 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTGR 316 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred hhHHHHHHHHHhCCCceEEEECCCc
Confidence 4555556555444 69999999984
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0071 Score=67.74 Aligned_cols=83 Identities=14% Similarity=0.124 Sum_probs=56.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+||+||||+++++.+...|++ |+.+.+++.. .+.+++.|.... .|.++.+..+.+ .+..
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~~---~~~~~~lGa~~~---~~~~~~~~~~~~-~~~~-- 232 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFGAE-VYATAGSTGK---CEACERLGAKRG---INYRSEDFAAVI-KAET-- 232 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHHTCSEE---EETTTSCHHHHH-HHHH--
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHhcCCCEE---EeCCchHHHHHH-HHHh--
Confidence 45678999999999999999999999999996 5555554322 233444565432 455554333333 3332
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
.+++|.+|+|+|.
T Consensus 233 ~~g~Dvvid~~g~ 245 (353)
T 4dup_A 233 GQGVDIILDMIGA 245 (353)
T ss_dssp SSCEEEEEESCCG
T ss_pred CCCceEEEECCCH
Confidence 4579999999984
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.011 Score=64.73 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=55.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc----hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~----~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++||+|+ ||+|++++..|++.|++.|++..|+.. .+++.+++... +..+ ...++.+.+++.+.+
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~--~~~~~~~~~~l~~~l----- 224 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKA--QLFDIEDHEQLRKEI----- 224 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEE--EEEETTCHHHHHHHH-----
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCce--EEeccchHHHHHhhh-----
Confidence 5889999997 799999999999999987888888732 23444455433 3333 345666765544332
Q ss_pred hcCCccEEEEcCccc
Q psy612 142 NIGPIDGVLHIAGIS 156 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~ 156 (1005)
...|+|||+..+.
T Consensus 225 --~~aDiIINaTp~G 237 (315)
T 3tnl_A 225 --AESVIFTNATGVG 237 (315)
T ss_dssp --HTCSEEEECSSTT
T ss_pred --cCCCEEEECccCC
Confidence 2589999987543
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0063 Score=65.53 Aligned_cols=74 Identities=11% Similarity=0.064 Sum_probs=49.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++++|+|+ ||+|+++++.|++.|+ .|++..|+. ..+++.+++...+ .+. .+|+ ++ +.+ +.
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~-------~~~--~~ 180 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DE-------LEG--HE 180 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GG-------GTT--CC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HH-------hcc--CC
Confidence 5789999998 7999999999999995 666667764 3334444443222 222 2332 11 112 68
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
+|+||||+|...
T Consensus 181 ~DivVn~t~~~~ 192 (271)
T 1nyt_A 181 FDLIINATSSGI 192 (271)
T ss_dssp CSEEEECCSCGG
T ss_pred CCEEEECCCCCC
Confidence 999999999754
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.011 Score=65.51 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=55.1
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+||+||||+.+++.+...|+++ +.+.+++. ..+.+++.|.... .|..+.+..+.+.+.. . .
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~V-i~~~~~~~---~~~~~~~~ga~~~---~~~~~~~~~~~~~~~~-~-~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHT-IAVASTDE---KLKIAKEYGAEYL---INASKEDILRQVLKFT-N-G 215 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEE-EEEESSHH---HHHHHHHTTCSEE---EETTTSCHHHHHHHHT-T-T
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE-EEEeCCHH---HHHHHHHcCCcEE---EeCCCchHHHHHHHHh-C-C
Confidence 56789999999999999999999999999964 44444432 2334455675433 3555543333332221 1 2
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
.++|.+|+|+|.
T Consensus 216 ~g~D~vid~~g~ 227 (334)
T 3qwb_A 216 KGVDASFDSVGK 227 (334)
T ss_dssp SCEEEEEECCGG
T ss_pred CCceEEEECCCh
Confidence 369999999984
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=7.9e-05 Score=85.93 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=29.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 103 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~ 103 (1005)
.+++++|||++ +||+++|+.|+..|++ |+++.+++
T Consensus 264 ~GKtVvVtGaG-gIG~aiA~~Laa~GA~-Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYG-DVGKGCAAALKQAGAR-VIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCE-EEEECSCH
T ss_pred cCCEEEEECCC-HHHHHHHHHHHHCCCE-EEEEcCCH
Confidence 68999999987 9999999999999995 55555553
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0094 Score=66.45 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=55.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+|++||||+.+++.+...|++ |+.+.+++.. .+.+++.|... .+|.++.+ +.+.+.++.. .
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~-Vi~~~~~~~~---~~~~~~~ga~~---~~d~~~~~-~~~~~~~~~~-~ 233 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR-VIATAGSEDK---LRRAKALGADE---TVNYTHPD-WPKEVRRLTG-G 233 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHHTCSE---EEETTSTT-HHHHHHHHTT-T
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHhcCCCE---EEcCCccc-HHHHHHHHhC-C
Confidence 5678999999999999999999999999985 5555555322 22333446543 25777653 2222333221 2
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
.++|.||+++|
T Consensus 234 ~~~d~vi~~~g 244 (343)
T 2eih_A 234 KGADKVVDHTG 244 (343)
T ss_dssp TCEEEEEESSC
T ss_pred CCceEEEECCC
Confidence 37999999998
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.011 Score=65.27 Aligned_cols=84 Identities=17% Similarity=0.066 Sum_probs=55.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+||+|+||+.+++.+...|++ |+.+.+++. ..+.+++.|.... .|.++.+..+.+.+.. .
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~---~~~~~~~~Ga~~~---~~~~~~~~~~~~~~~~--~ 206 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSPE---KAAHAKALGAWET---IDYSHEDVAKRVLELT--D 206 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEEEESSHH---HHHHHHHHTCSEE---EETTTSCHHHHHHHHT--T
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHcCCCEE---EeCCCccHHHHHHHHh--C
Confidence 35778999999999999999999999999995 454455432 2233445565432 3555543333333222 1
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
...+|.+|+|+|.
T Consensus 207 ~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ 219 (325)
T ss_dssp TCCEEEEEESSCG
T ss_pred CCCceEEEECCCh
Confidence 1379999999985
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0094 Score=56.78 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=51.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++.++|+|+ |++|+.+++.|.+.|..++++ .+++ +..+.+...+. .++.+|.++.+.+.++ .....|
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~-d~~~---~~~~~~~~~~~--~~~~~d~~~~~~l~~~------~~~~~d 72 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAV-DINE---EKVNAYASYAT--HAVIANATEENELLSL------GIRNFE 72 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEE-ESCH---HHHHTTTTTCS--EEEECCTTCHHHHHTT------TGGGCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEE-eCCH---HHHHHHHHhCC--EEEEeCCCCHHHHHhc------CCCCCC
Confidence 456899998 999999999999999865544 4442 22233333343 4577899987655332 234799
Q ss_pred EEEEcCcc
Q psy612 148 GVLHIAGI 155 (1005)
Q Consensus 148 gvIh~AG~ 155 (1005)
.||++++.
T Consensus 73 ~vi~~~~~ 80 (144)
T 2hmt_A 73 YVIVAIGA 80 (144)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999864
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.013 Score=68.05 Aligned_cols=89 Identities=21% Similarity=0.200 Sum_probs=61.9
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEe--c--------CCCHHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQV--D--------VSDKLKM 132 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~--D--------vtd~~~v 132 (1005)
..+++++++||+|++|+||+..++.+...|++++++. +++ +..+.+++.|....+-.. | +++.+++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~-~~~---~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV-SSP---QKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSH---HHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE-CCH---HHHHHHHhhCCcEEEecCcCcccccccccccchHHH
Confidence 3567899999999999999999998888999766665 333 233444556765432211 1 2455666
Q ss_pred HHHHHHHHhhcC--CccEEEEcCcc
Q psy612 133 ISEINSIINNIG--PIDGVLHIAGI 155 (1005)
Q Consensus 133 ~~~~~~i~~~~g--~idgvIh~AG~ 155 (1005)
+++.+.+.+..+ ++|+||.++|.
T Consensus 300 ~~~~~~i~~~t~g~g~Dvvid~~G~ 324 (456)
T 3krt_A 300 KRFGKRIRELTGGEDIDIVFEHPGR 324 (456)
T ss_dssp HHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCCc
Confidence 666677665443 79999999874
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.014 Score=64.84 Aligned_cols=84 Identities=12% Similarity=0.093 Sum_probs=54.6
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+|++||||+.+++.+...|++++++ .+++...+.. ++.|.... .|..+.+..+.+.+.. .
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~-~~~~~~~~~~---~~lga~~~---~~~~~~~~~~~~~~~~--~ 210 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAV-TRNNKHTEEL---LRLGAAYV---IDTSTAPLYETVMELT--N 210 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE-ESSSTTHHHH---HHHTCSEE---EETTTSCHHHHHHHHT--T
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH---HhCCCcEE---EeCCcccHHHHHHHHh--C
Confidence 457789999999999999999999998899955444 4444333333 33465533 3555543333332221 1
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
...+|.+|+|+|.
T Consensus 211 ~~g~Dvvid~~g~ 223 (340)
T 3gms_A 211 GIGADAAIDSIGG 223 (340)
T ss_dssp TSCEEEEEESSCH
T ss_pred CCCCcEEEECCCC
Confidence 2379999999985
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.025 Score=53.98 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=53.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+.++|+|+ |.+|..+++.|.++|..++++..+. +..+.+...+ +.++..|.++++.++++ .....|
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~----~~~~~~~~~~--~~~~~gd~~~~~~l~~~------~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK----EKIELLEDEG--FDAVIADPTDESFYRSL------DLEGVS 72 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH----HHHHHHHHTT--CEEEECCTTCHHHHHHS------CCTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH----HHHHHHHHCC--CcEEECCCCCHHHHHhC------CcccCC
Confidence 457899998 7799999999999998776665432 3344455555 45678999998776543 234689
Q ss_pred EEEEcCc
Q psy612 148 GVLHIAG 154 (1005)
Q Consensus 148 gvIh~AG 154 (1005)
.||.+.+
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998775
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.013 Score=66.18 Aligned_cols=75 Identities=11% Similarity=0.191 Sum_probs=52.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++++++|+|+ |+||+.+++.+...|++ |++..|++.. .+.+.+ .+.. +.+|+++.+++.+++. .
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~-V~~~d~~~~~---~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~ 229 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQ-VTILDVNHKR---LQYLDDVFGGR---VITLTATEANIKKSVQ-------H 229 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHTTTS---EEEEECCHHHHHHHHH-------H
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEECCHHH---HHHHHHhcCce---EEEecCCHHHHHHHHh-------C
Confidence 3589999999 99999999999999995 5555555321 222322 4554 4568888877766553 5
Q ss_pred ccEEEEcCccc
Q psy612 146 IDGVLHIAGIS 156 (1005)
Q Consensus 146 idgvIh~AG~~ 156 (1005)
.|+||+++|..
T Consensus 230 ~DvVi~~~g~~ 240 (369)
T 2eez_A 230 ADLLIGAVLVP 240 (369)
T ss_dssp CSEEEECCC--
T ss_pred CCEEEECCCCC
Confidence 89999999864
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.028 Score=62.60 Aligned_cols=83 Identities=12% Similarity=0.118 Sum_probs=52.9
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+|++||||+.+++.+...|++++ .+.+++...+.. ++.|.... .|.. +++.+.+.++..
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi-~~~~~~~~~~~~---~~~ga~~v---~~~~--~~~~~~v~~~~~- 224 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVI-AVVNRTAATEFV---KSVGADIV---LPLE--EGWAKAVREATG- 224 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESSGGGHHHH---HHHTCSEE---EESS--TTHHHHHHHHTT-
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE-EEeCCHHHHHHH---HhcCCcEE---ecCc--hhHHHHHHHHhC-
Confidence 4567899999999999999999999999999554 444444333333 33465432 2433 233333333221
Q ss_pred cCCccEEEEcCcc
Q psy612 143 IGPIDGVLHIAGI 155 (1005)
Q Consensus 143 ~g~idgvIh~AG~ 155 (1005)
..++|.+|+|+|.
T Consensus 225 ~~g~Dvvid~~g~ 237 (342)
T 4eye_A 225 GAGVDMVVDPIGG 237 (342)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCCceEEEECCch
Confidence 1269999999984
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.021 Score=64.16 Aligned_cols=76 Identities=16% Similarity=0.299 Sum_probs=49.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++||+|+ ||||+.+++.+...|+ +|+.+.+++..++..+.+++.|.. .+ | .+ ++.+.+.+ . . +++|
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~--~v--~-~~--~~~~~~~~-~-~-~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTN--YY--N-SS--NGYDKLKD-S-V-GKFD 248 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCE--EE--E-CT--TCSHHHHH-H-H-CCEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCc--ee--c-hH--HHHHHHHH-h-C-CCCC
Confidence 899999999 9999999999999999 455555544111222334445653 23 5 54 22222322 2 2 6899
Q ss_pred EEEEcCcc
Q psy612 148 GVLHIAGI 155 (1005)
Q Consensus 148 gvIh~AG~ 155 (1005)
.||+++|.
T Consensus 249 ~vid~~g~ 256 (366)
T 2cdc_A 249 VIIDATGA 256 (366)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999985
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.038 Score=60.70 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=63.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCC-cEEEEecC--CCc-hHHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGR--SKL-NSIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r--~~~-~~~~~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++||||+|.+|..++..|+.+|. ..++++.+ .+. .+.....+.. .+..+.+...| | .+.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d---------~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D---------ENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T---------TCGG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c---------chHH
Confidence 489999999999999999998875 44777665 321 2221222321 12222222211 0 0123
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
.+...|.|||.||+.... .++.. ..+..|+.++..+.+.+..
T Consensus 71 al~gaD~Vi~~Ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i~~ 112 (313)
T 1hye_A 71 IIDESDVVIITSGVPRKE----GMSRM---DLAKTNAKIVGKYAKKIAE 112 (313)
T ss_dssp GGTTCSEEEECCSCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCC----CCcHH---HHHHHHHHHHHHHHHHHHH
Confidence 345799999999976411 22333 3588999999998888543
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.093 Score=57.93 Aligned_cols=103 Identities=10% Similarity=0.062 Sum_probs=64.2
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCC--cEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNN--KAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~--~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
..++||||+|.+|..++..|+.+|. ..|+++.+.+. .....+|..... .+.. +++..++.++ +..
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~----~~~t~d~~~a-------l~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRG----FLGQQQLEAA-------LTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEE----EESHHHHHHH-------HTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEE----EeCCCCHHHH-------cCC
Confidence 4689999999999999999998873 34666665543 333334544322 2222 2233333322 346
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
.|.|||+||..... ..+.. ..+..|+.++..+.+.+..
T Consensus 77 aDvVi~~ag~~~~~----g~~r~---dl~~~N~~~~~~i~~~i~~ 114 (326)
T 1smk_A 77 MDLIIVPAGVPRKP----GMTRD---DLFKINAGIVKTLCEGIAK 114 (326)
T ss_dssp CSEEEECCCCCCCS----SCCCS---HHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCcCCCC----CCCHH---HHHHHHHHHHHHHHHHHHh
Confidence 89999999975411 11222 3477888888888887543
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.031 Score=60.38 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=52.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++|+|+ ||+|++++..|++.|+..|++..|+. ..+++.+++...+..+.+...+..+ +.+.+ . .
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l----~---~ 194 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI----A---A 194 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH----H---H
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH----h---c
Confidence 5789999998 89999999999999998888888874 3445556665432222223344333 22222 1 3
Q ss_pred ccEEEEcCcc
Q psy612 146 IDGVLHIAGI 155 (1005)
Q Consensus 146 idgvIh~AG~ 155 (1005)
.|+|||+..+
T Consensus 195 ~DiVInaTp~ 204 (283)
T 3jyo_A 195 ADGVVNATPM 204 (283)
T ss_dssp SSEEEECSST
T ss_pred CCEEEECCCC
Confidence 7999998754
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.027 Score=63.24 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=54.6
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+||+||||+.+++.+...|++ |+.+.+++ +..+.+++.|.... .|..+. ++.+.+.+.. -
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~---~~~~~~~~~Ga~~~---~~~~~~-~~~~~~~~~~--~ 229 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH-VIGTCSSD---EKSAFLKSLGCDRP---INYKTE-PVGTVLKQEY--P 229 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHTTCSEE---EETTTS-CHHHHHHHHC--T
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEECCH---HHHHHHHHcCCcEE---EecCCh-hHHHHHHHhc--C
Confidence 4678999999999999999999999999995 55555543 22334455676532 354443 2333333321 1
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|+|+|.
T Consensus 230 ~g~D~vid~~g~ 241 (362)
T 2c0c_A 230 EGVDVVYESVGG 241 (362)
T ss_dssp TCEEEEEECSCT
T ss_pred CCCCEEEECCCH
Confidence 479999999873
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.038 Score=61.35 Aligned_cols=80 Identities=16% Similarity=0.086 Sum_probs=54.4
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+|+ ||+|+.+++.+...|+ +|+.+.+++. ..+.+++.|... .+|.++.+ +.+.+.++.
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga-~Vi~~~~~~~---~~~~~~~lGa~~---~~d~~~~~-~~~~~~~~~--- 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDE---KLELAKELGADL---VVNPLKED-AAKFMKEKV--- 228 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHH---HHHHHHHTTCSE---EECTTTSC-HHHHHHHHH---
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCHH---HHHHHHHCCCCE---EecCCCcc-HHHHHHHHh---
Confidence 3578999999999 8899999999988998 5666666542 223345567642 24776543 333333322
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|+++|.
T Consensus 229 ~~~d~vid~~g~ 240 (339)
T 1rjw_A 229 GGVHAAVVTAVS 240 (339)
T ss_dssp SSEEEEEESSCC
T ss_pred CCCCEEEECCCC
Confidence 589999999984
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.038 Score=61.45 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=53.0
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..+++++++||+||+|+||+.+++.+...|+++++ + +++. ..+.+++.|... +| .+. ++.+.+.+...
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~-~-~~~~---~~~~~~~lGa~~----i~-~~~-~~~~~~~~~~~- 213 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFA-T-ARGS---DLEYVRDLGATP----ID-ASR-EPEDYAAEHTA- 213 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-E-ECHH---HHHHHHHHTSEE----EE-TTS-CHHHHHHHHHT-
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEE-E-eCHH---HHHHHHHcCCCE----ec-cCC-CHHHHHHHHhc-
Confidence 45678999999999999999999999999996444 4 4432 233445567653 34 332 23333333322
Q ss_pred cCCccEEEEcCc
Q psy612 143 IGPIDGVLHIAG 154 (1005)
Q Consensus 143 ~g~idgvIh~AG 154 (1005)
..++|.+|+++|
T Consensus 214 ~~g~D~vid~~g 225 (343)
T 3gaz_A 214 GQGFDLVYDTLG 225 (343)
T ss_dssp TSCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 237999999998
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.049 Score=61.06 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=60.1
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+|+ |++|+..++.....|+++|+.+.+++...+..+++ +..+..+..|-.+.+++.+.+.++.. -
T Consensus 176 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g 250 (363)
T 3m6i_A 176 GVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI---CPEVVTHKVERLSAEESAKKIVESFG-G 250 (363)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH---CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh---chhcccccccccchHHHHHHHHHHhC-C
Confidence 4678999999998 99999999888888998666666665444444444 33455555665666665555544322 2
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
..+|.+|.++|.
T Consensus 251 ~g~Dvvid~~g~ 262 (363)
T 3m6i_A 251 IEPAVALECTGV 262 (363)
T ss_dssp CCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 379999999874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.059 Score=60.01 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=50.6
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++||+||+|+||+..++.+...|++ |+.+.+++...+. +++.|.... .|..+.+-.+ .+.++... .++|
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~---~~~~Ga~~~---~~~~~~~~~~-~v~~~~~~-~g~D 235 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFR-PIVTVRRDEQIAL---LKDIGAAHV---LNEKAPDFEA-TLREVMKA-EQPR 235 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCE-EEEEESCGGGHHH---HHHHTCSEE---EETTSTTHHH-HHHHHHHH-HCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHH---HHHcCCCEE---EECCcHHHHH-HHHHHhcC-CCCc
Confidence 379999999999999999999899995 5555554433333 334565432 3555533333 33332221 2799
Q ss_pred EEEEcCcc
Q psy612 148 GVLHIAGI 155 (1005)
Q Consensus 148 gvIh~AG~ 155 (1005)
.+|+|+|.
T Consensus 236 ~vid~~g~ 243 (349)
T 3pi7_A 236 IFLDAVTG 243 (349)
T ss_dssp EEEESSCH
T ss_pred EEEECCCC
Confidence 99999984
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=95.08 E-value=0.035 Score=62.27 Aligned_cols=89 Identities=15% Similarity=0.124 Sum_probs=55.9
Q ss_pred cccCC-CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCH--HHHHHHHHHHH
Q psy612 64 YIKQG-GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK--LKMISEINSII 140 (1005)
Q Consensus 64 ~~~~~-~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~--~~v~~~~~~i~ 140 (1005)
.++++ .++||+|++|++|+..++.+...|++++++++..+...+..+.+++.|....+ |-.+. +++.+.+.++.
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t 239 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWI 239 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHh
Confidence 56788 99999999999999999888888997777665554423333445566765332 22110 12222232222
Q ss_pred h-hcCCccEEEEcCcc
Q psy612 141 N-NIGPIDGVLHIAGI 155 (1005)
Q Consensus 141 ~-~~g~idgvIh~AG~ 155 (1005)
. ..+++|.+|.++|.
T Consensus 240 ~~~~~g~Dvvid~~G~ 255 (364)
T 1gu7_A 240 KQSGGEAKLALNCVGG 255 (364)
T ss_dssp HHHTCCEEEEEESSCH
T ss_pred hccCCCceEEEECCCc
Confidence 0 12479999999874
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.16 Score=55.47 Aligned_cols=98 Identities=10% Similarity=0.035 Sum_probs=61.5
Q ss_pred EEEEECChhHHHHHHHHHHHHcCC-cEEEEecC--CCc-hHHHHHHHHhC---CCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGR--SKL-NSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r--~~~-~~~~~~~l~~~---g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.++||||+|.+|..++..|+.+|. ..+++..+ .+. .+.....+... ...+.+.. | +. +.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence 489999999999999999998874 34777766 321 11222233321 22333222 2 21 23
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHH
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYAL 188 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~ 188 (1005)
+...|.|||+||+.... .++.+ ..+..|+.++..+.+.+
T Consensus 68 ~~~aDvVi~~ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i 106 (303)
T 1o6z_A 68 TAGSDVVVITAGIPRQP----GQTRI---DLAGDNAPIMEDIQSSL 106 (303)
T ss_dssp GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHH
Confidence 45799999999975411 22333 34788999988888874
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.032 Score=60.80 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHcCCcEEEEecCCCchH------H--HHHHHHh---CCCcEEEEEecCCCHHHHHHHHHHH-------
Q psy612 78 GRLGMLFSDYLINKYSTNLILSGRSKLNS------I--IYKKLKK---FNNKAIYIQVDVSDKLKMISEINSI------- 139 (1005)
Q Consensus 78 gGIG~aiA~~La~~Ga~~vil~~r~~~~~------~--~~~~l~~---~g~~v~~~~~Dvtd~~~v~~~~~~i------- 139 (1005)
|-.|.++|++++++|+.++++.+...... . +.+.++. ....+..+.+|+...+++.+++...
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~ 144 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAG 144 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhccc
Confidence 45999999999999998887777543211 0 0111111 1123456677777777777666543
Q ss_pred -----------------------HhhcCCccEEEEcCcccC
Q psy612 140 -----------------------INNIGPIDGVLHIAGISG 157 (1005)
Q Consensus 140 -----------------------~~~~g~idgvIh~AG~~~ 157 (1005)
.+.++..|.+|++|++..
T Consensus 145 ~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD 185 (313)
T 1p9o_A 145 TFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD 185 (313)
T ss_dssp CEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred cceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence 245688999999999976
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.19 Score=55.41 Aligned_cols=120 Identities=10% Similarity=0.023 Sum_probs=73.5
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCC------cEEEEecCC----Cc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRS----KL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga------~~vil~~r~----~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
..++||||+|.+|..++..|+.+|. ..|+++.+. +. .+.....|......+. .|+....+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~---- 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPM---- 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHH----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcH----
Confidence 4689999999999999999999875 267777665 21 2222334544211111 2333222222
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
+.+...|.|||+||... . ...+.. ..+..|+.++..+.+.+..+ . .+...||++|.-.
T Consensus 79 ---~al~~aD~Vi~~ag~~~-~---~g~~r~---dl~~~N~~i~~~i~~~i~~~----~-~p~a~ii~~SNPv 136 (329)
T 1b8p_A 79 ---TAFKDADVALLVGARPR-G---PGMERK---DLLEANAQIFTVQGKAIDAV----A-SRNIKVLVVGNPA 136 (329)
T ss_dssp ---HHTTTCSEEEECCCCCC-C---TTCCHH---HHHHHHHHHHHHHHHHHHHH----S-CTTCEEEECSSSH
T ss_pred ---HHhCCCCEEEEeCCCCC-C---CCCCHH---HHHHHHHHHHHHHHHHHHHh----c-CCCeEEEEccCch
Confidence 22346899999999765 2 123433 35788888888888875332 0 1445788888633
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.052 Score=61.14 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=52.9
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+++++++||+||+|+||+..++.+...|+++++.. +.+. .+.+++.|.... .|..+.+- .+.+.+ .+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~----~~~~~~lGa~~v---~~~~~~~~----~~~~~~-~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDA----SELVRKLGADDV---IDYKSGSV----EEQLKS-LK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGG----HHHHHHTTCSEE---EETTSSCH----HHHHHT-SC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHH----HHHHHHcCCCEE---EECCchHH----HHHHhh-cC
Confidence 67889999999999999999998888898655444 4322 233456676533 35554322 222322 36
Q ss_pred CccEEEEcCcc
Q psy612 145 PIDGVLHIAGI 155 (1005)
Q Consensus 145 ~idgvIh~AG~ 155 (1005)
++|.+|+++|.
T Consensus 248 g~D~vid~~g~ 258 (375)
T 2vn8_A 248 PFDFILDNVGG 258 (375)
T ss_dssp CBSEEEESSCT
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.068 Score=57.41 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=48.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.+++++|+|+ ||+|++++..|++.| ..|++..|+. ..+++.+++...+ .+.. +|+. + +.+ +.
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G-~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~~---~-------~~~--~~ 180 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYG-NIQA--VSMD---S-------IPL--QT 180 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEGG---G-------CCC--SC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHccccC-CeEE--eeHH---H-------hcc--CC
Confidence 5789999998 899999999999999 5666667763 3445555554322 2322 3331 1 101 58
Q ss_pred ccEEEEcCcccC
Q psy612 146 IDGVLHIAGISG 157 (1005)
Q Consensus 146 idgvIh~AG~~~ 157 (1005)
.|+|||+++...
T Consensus 181 ~DivIn~t~~~~ 192 (272)
T 1p77_A 181 YDLVINATSAGL 192 (272)
T ss_dssp CSEEEECCCC--
T ss_pred CCEEEECCCCCC
Confidence 999999998754
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.096 Score=58.25 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=51.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+++++||+||+|++|+..++.+...|++ |+.+.+++. ..+.+++.|.... .|..+ ++.+.+.++ ..+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~-Vi~~~~~~~---~~~~~~~lGa~~v---i~~~~--~~~~~~~~~--~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLR-VITTASRNE---TIEWTKKMGADIV---LNHKE--SLLNQFKTQ--GIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEECCSHH---HHHHHHHHTCSEE---ECTTS--CHHHHHHHH--TCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHhcCCcEE---EECCc--cHHHHHHHh--CCCCc
Confidence 7899999999999999999999889995 555555432 2334445565432 24333 233333333 23479
Q ss_pred cEEEEcCcc
Q psy612 147 DGVLHIAGI 155 (1005)
Q Consensus 147 dgvIh~AG~ 155 (1005)
|.+|+++|.
T Consensus 219 Dvv~d~~g~ 227 (346)
T 3fbg_A 219 DYVFCTFNT 227 (346)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCc
Confidence 999999874
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=94.69 E-value=0.057 Score=58.78 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=50.6
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHhhc
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIINNI 143 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~~~ 143 (1005)
+++++++||+|++||+|+.+++.+...|++ |+.+.+++...+ .+++.|.... .|..+ .+- .+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~-Vi~~~~~~~~~~---~~~~~ga~~~---~~~~~~~~~----~~~~---- 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLR-VLAAASRPEKLA---LPLALGAEEA---ATYAEVPER----AKAW---- 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEEEESSGGGSH---HHHHTTCSEE---EEGGGHHHH----HHHT----
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHH---HHHhcCCCEE---EECCcchhH----HHHh----
Confidence 678999999999999999999998889985 555555432222 2344565432 35554 322 2222
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|+ +|.
T Consensus 188 ~~~d~vid-~g~ 198 (302)
T 1iz0_A 188 GGLDLVLE-VRG 198 (302)
T ss_dssp TSEEEEEE-CSC
T ss_pred cCceEEEE-CCH
Confidence 57999999 874
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=94.60 E-value=0.045 Score=61.26 Aligned_cols=87 Identities=9% Similarity=0.123 Sum_probs=57.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.++||+|++|++|+..++.+...|+++++++++.+..++..+.+++.|....+ |-.+ ... ..+.++....
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~-~~~~~~~~~~ 238 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEE-LRR-PEMKNFFKDM 238 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHH-HHS-GGGGGTTSSS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCc-chH-HHHHHHHhCC
Confidence 4678999999999999999998887778998888877765544445556677865332 2111 111 1111221222
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.+|.+.|.
T Consensus 239 ~~~Dvvid~~g~ 250 (357)
T 1zsy_A 239 PQPRLALNCVGG 250 (357)
T ss_dssp CCCSEEEESSCH
T ss_pred CCceEEEECCCc
Confidence 359999999873
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.15 Score=55.73 Aligned_cols=80 Identities=13% Similarity=0.141 Sum_probs=53.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc----hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~----~~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.++++||+|+ ||.|++++..|++.|++.|.+..|+.. .+++.+++... +..+. ..+..+.+.+.+.+
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l----- 218 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL----- 218 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH-----
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc-----
Confidence 5789999997 899999999999999988888888733 23344444432 33333 34555543222222
Q ss_pred hcCCccEEEEcCccc
Q psy612 142 NIGPIDGVLHIAGIS 156 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~ 156 (1005)
...|+|||+..+.
T Consensus 219 --~~~DiIINaTp~G 231 (312)
T 3t4e_A 219 --ASADILTNGTKVG 231 (312)
T ss_dssp --HHCSEEEECSSTT
T ss_pred --cCceEEEECCcCC
Confidence 2479999987653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.004 Score=68.39 Aligned_cols=36 Identities=6% Similarity=-0.124 Sum_probs=9.6
Q ss_pred CCchHHHHHHHHHHHhhcCcccCccccccCCCHHHH
Q psy612 366 GFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERL 401 (1005)
Q Consensus 366 G~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~L 401 (1005)
|+|||++++|+++|++.||++|+...+|++||+..|
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l 36 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTL 36 (316)
T ss_dssp -------------------------CCCCCTTSCSE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCee
Confidence 899999999999999999999999999999998654
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=94.08 E-value=0.23 Score=55.33 Aligned_cols=83 Identities=13% Similarity=0.217 Sum_probs=54.4
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCC--CHHHHHHHHHHHHh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS--DKLKMISEINSIIN 141 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvt--d~~~v~~~~~~i~~ 141 (1005)
.++++.++||+|+ |++|+..++.+...|++.|+.+.+++. ..+.+++.|.... .|.. +.++..+.+.+...
T Consensus 168 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~---~~~~a~~lGa~~v---i~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 168 GVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT---RLSKAKEIGADLV---LQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHTTCSEE---EECSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHhCCCEE---EcCcccccchHHHHHHHHhC
Confidence 4678999999996 999999998888889866776666542 2334456676532 3444 23333333333222
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
+++|.||.++|.
T Consensus 241 --~g~D~vid~~g~ 252 (356)
T 1pl8_A 241 --CKPEVTIECTGA 252 (356)
T ss_dssp --SCCSEEEECSCC
T ss_pred --CCCCEEEECCCC
Confidence 479999999874
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=93.83 E-value=0.13 Score=57.87 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=56.0
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~ 141 (1005)
..+++++++||+|+ |++|+..++.+...|+.+|+.+.+++...+. +++.|.... .|..+ .+++.+.+.++..
T Consensus 188 ~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~---~~~lGa~~v---i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 188 AKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK---AKVFGATDF---VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---HHHTTCCEE---ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH---HHHhCCceE---EeccccchhHHHHHHHHhC
Confidence 34678899999995 9999999998888898777777666543333 345575422 35443 1234444444333
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
+.+|.+|.++|.
T Consensus 261 --~g~D~vid~~g~ 272 (374)
T 1cdo_A 261 --GGVDFSLECVGN 272 (374)
T ss_dssp --SCBSEEEECSCC
T ss_pred --CCCCEEEECCCC
Confidence 479999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1005 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 7e-65 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 2e-57 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 5e-51 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 3e-49 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 3e-47 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 3e-43 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 5e-42 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 1e-36 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 4e-35 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 6e-35 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 5e-33 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 1e-31 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 6e-31 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 1e-29 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 5e-28 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 1e-25 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 9e-12 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 7e-10 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 3e-08 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 5e-08 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 8e-08 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-07 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-07 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-07 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 5e-07 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 9e-07 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 1e-06 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-06 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 3e-06 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 3e-06 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 4e-06 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 5e-06 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-06 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 7e-06 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 8e-06 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 9e-06 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-05 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 1e-05 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 1e-05 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-05 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 2e-05 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-05 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 2e-05 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 4e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 4e-05 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 6e-05 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-05 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 1e-04 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-04 | |
| d2af8a_ | 86 | a.28.1.1 (A:) Actinorhodin polyketide synthase acy | 2e-04 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 3e-04 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 3e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-04 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 5e-04 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 0.001 | |
| d1or5a_ | 82 | a.28.1.1 (A:) Frenolicin polyketide synthase acyl | 0.001 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 0.001 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 0.001 | |
| d1f80d_ | 74 | a.28.1.1 (D:) Acyl carrier protein {Bacillus subti | 0.001 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.002 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 0.002 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 0.003 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 0.003 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 0.003 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.003 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 0.004 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 217 bits (553), Expect = 7e-65
Identities = 53/263 (20%), Positives = 86/263 (32%), Gaps = 36/263 (13%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ + G+ P F K + K + I FD
Sbjct: 4 VVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITR--FDASALP---------------- 45
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ + E R+D ++ L + LALEDAG P + +++G VG
Sbjct: 46 VRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105
Query: 585 EGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 631
G +R+ + + SA +A GP + TAC++
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 686
A A + ++ E D ++ G I+P A A LS P+ F +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225
Query: 687 GLVPSEAVVAVVLKRLSRALSDG 709
G V E +VL+ A G
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKRG 248
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 196 bits (498), Expect = 2e-57
Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 35/263 (13%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ + G+ P + WK L+ + IS I FD Y +K+ G
Sbjct: 4 VVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDH--FDTSAYA-----------TKFAG 50
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ + D + + E +MD ++ + A++D+G + +IG +G
Sbjct: 51 LVKDFNCEDIISRK----EQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSG 106
Query: 585 EGSNYQDRLDQVNL-------------TSTHNAILSARLAYFMDLKGPVMAINTACSSSL 631
G + +L ST +++ L L+GP ++I TA +S +
Sbjct: 107 IGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGV 166
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 686
A + + + D ++ G +P +A LS P +D+ +
Sbjct: 167 HNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERD 226
Query: 687 GLVPSEAVVAVVLKRLSRALSDG 709
G V + +VL+ A G
Sbjct: 227 GFVLGDGAGMLVLEEYEHAKKRG 249
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 177 bits (450), Expect = 5e-51
Identities = 56/263 (21%), Positives = 91/263 (34%), Gaps = 35/263 (13%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ + G+ P + ++W+ L+ ++ I I FD S
Sbjct: 4 VVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITR--FDA---------------SDQAC 46
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
G + + EA+RMD + S A+ DA N++ +IG+ +G
Sbjct: 47 RFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTG 106
Query: 585 EGSNYQDRLDQVNLTS-------------THNAILSARLAYFMDLKGPVMAINTACSSSL 631
G Q L + S A + KGP TAC++
Sbjct: 107 IGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGS 166
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 686
A A + ++ I G I+P +Y SA LS P FD+ +
Sbjct: 167 NAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRD 226
Query: 687 GLVPSEAVVAVVLKRLSRALSDG 709
G V E ++L+ L AL+ G
Sbjct: 227 GFVMGEGSGILILEELESALARG 249
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 173 bits (438), Expect = 3e-49
Identities = 56/262 (21%), Positives = 83/262 (31%), Gaps = 34/262 (12%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ + G P EFW L K I I + FD S +
Sbjct: 11 VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITK--FDH---------------SDFDV 53
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ P + R D + L + A+ A + + G+ V
Sbjct: 54 HNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 113
Query: 585 EGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 631
G + R+ + L + S +A G +INTACSSS
Sbjct: 114 IGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSN 173
Query: 632 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANG 687
A A +S++ D + G I+P A + LS P FD+ NG
Sbjct: 174 DAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNG 233
Query: 688 LVPSEAVVAVVLKRLSRALSDG 709
V E +VL+ L A G
Sbjct: 234 FVMGEGSGMLVLESLEHAEKRG 255
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 168 bits (425), Expect = 3e-47
Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 20/268 (7%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ + G+ P R + W+ LI+ + I + K + E + S
Sbjct: 3 VVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVA 62
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV- 583
+ F E L ++ + + + + AL DA + P + ++
Sbjct: 63 AFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGG 122
Query: 584 -------------EEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 630
RL + + S ++ +GP A TAC++
Sbjct: 123 GIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATG 182
Query: 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDER 684
+ A + ++ + D ++ G I + + + LS P FD
Sbjct: 183 AHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD 242
Query: 685 ANGLVPSEAVVAVVLKRLSRALSDGDPI 712
+G V E +VL+ A G I
Sbjct: 243 RDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 154 bits (389), Expect = 3e-43
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 12/209 (5%)
Query: 674 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP 733
P+ FD +G V +E VL+ AL+ G IHA I G +
Sbjct: 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62
Query: 734 NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAI 793
+G E I+ +S + DI+YI HG+GT+ D E A +
Sbjct: 63 DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARR---TPV 119
Query: 794 TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 853
+S KS +GH+ A G + + V ++++ ++P + + + L P
Sbjct: 120 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP---------L 170
Query: 854 NTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
KLR G G + +VL++
Sbjct: 171 EARERKLRSVLTVGSGFGGFQSAMVLRDA 199
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 152 bits (383), Expect = 5e-42
Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 12/255 (4%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
I G+ N E L + I+ E + G
Sbjct: 4 AVITGLGIVSSIGNNQQEVLASLREGRSGITFSQE--LKDSGM---RSHVWGNVKLDTTG 58
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
I I + L E++ G G +
Sbjct: 59 LIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 585 EGSNYQD--RLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLR 642
+ + +T + +SA LA + G +I++AC++S A + ++
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 643 QHECDTAISAGVNLMISP-----EAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 697
+ D + G + +A A+++ +P+ +D +G V + V
Sbjct: 179 LGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238
Query: 698 VLKRLSRALSDGDPI 712
V++ L AL+ G I
Sbjct: 239 VVEELEHALARGAHI 253
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 133 bits (336), Expect = 1e-36
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 712 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771
I+A + G G++ D NG + + + + + I Y+ HGT T GD
Sbjct: 2 IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
E A+ +F ++S KS GH A+G V I + +++ + +P +++ +
Sbjct: 62 AEAQAVKTIFG---EAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118
Query: 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881
+ L P + ++FG GTN ++ ++
Sbjct: 119 NPDEGCDLDFVPH--------EARQVSGMEYTLCNSFGFGGTNGSLIFKK 160
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 129 bits (324), Expect = 4e-35
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 712 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771
I+A + G G + D P G + K + + PE + YI HGT T +GD
Sbjct: 2 IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
E+ A+ VF + ++S KS IGH A+G V I VQ++ + +IP +++ E
Sbjct: 62 AEVLAIKRVFGDHAKR---LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118
Query: 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
+ + L P K+ ++F G NA +
Sbjct: 119 DPDPELDLDFVP----------EPREAKVDYALSNSFAFGGHNAVLAF 156
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 128 bits (323), Expect = 6e-35
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 712 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771
I+ + G + D P+G T I K S L PE ++YI HGT T D
Sbjct: 2 IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
E A+ N YN A++S KS GH SG + + V +I +P +++ E
Sbjct: 62 TETRAIKQALGNHAYN---IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118
Query: 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
+ L P + + + ++FG G N + ++Y
Sbjct: 119 NPDPECDLDYVP---------GQSRALIVDVALSNSFGFGGHNVTLAFKKY 160
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 125 bits (313), Expect = 5e-33
Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 38/230 (16%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ I G+ R P +FW++L + + I FD S +
Sbjct: 3 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRISF--FDP---------------SPYRS 45
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ +FDP+ P E +RMD + + + A +G P+ + ++G+ +G
Sbjct: 46 QVAAEADFDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 105
Query: 585 EGSNYQDRLDQVNLTS--------------------THNAILSARLAYFMDLKGPVMAIN 624
+ + L S +++ A +A+ + +GPV ++
Sbjct: 106 -VAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVS 164
Query: 625 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP 674
T C+S L + A +++ + D + + I+P + +
Sbjct: 165 TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 119 bits (298), Expect = 1e-31
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 714 AIIRGSGINYDGKTNGITAPNGISQTELI--KSVYKKSNLNPEDINYIITHGTGTKLGDP 771
A + G G++ D + IT P + ++ ++S L P I+Y+ H T T +GD
Sbjct: 2 AELCGYGMSGDA--HHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDA 59
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
VE A+ VF + A +S K GH A+G V I + +I + + P +L+ +
Sbjct: 60 VEARAIKTVFSEHATSG-TLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVK 118
Query: 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 879
+ + P +K +R ++FG GTNA ++
Sbjct: 119 NPDPIFDKRFMPLTTSK--------KMLVRTAMSNSFGFGGTNASLLF 158
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 118 bits (296), Expect = 6e-31
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 18/210 (8%)
Query: 674 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDP-IHAIIRGSGINYDGKTNGITA 732
PD FDERA G VP E +VL+ + A + G + + G +D +
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFD---PAPGS 58
Query: 733 PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 792
I+ + PED++ + G G D E A+ V + ++
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-----FGREGVP 113
Query: 793 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKK 852
+T K+ G ++ G + ++ + S++ +I + + + +
Sbjct: 114 VTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI----DLVLGEPRS 169
Query: 853 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
R V A G G N+ VL+ +
Sbjct: 170 T-----APRTALVLARGRWGFNSAAVLRRF 194
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 115 bits (287), Expect = 1e-29
Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 5/209 (2%)
Query: 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 524
+ I G+ P + +W +++ + + + FD Y + ++ +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTR--FDVSRYPATLAGQIDDFHAPDHI 59
Query: 525 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 584
+ + D L A + ES + N +
Sbjct: 60 PGRLLPQTD--PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRK 117
Query: 585 EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQH 644
S + + A+ + +++ ++GP A+ + L A A +++R
Sbjct: 118 LWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIR-R 176
Query: 645 ECDTAISAGVNLMISPEAYIAMTSAGMLS 673
+S GV+ + P +++ ++G +S
Sbjct: 177 GTPLVVSGGVDSALDPWGWVSQIASGRIS 205
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 108 bits (270), Expect = 5e-28
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 714 AIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 773
A I G G DG + AP+G +K + I+Y+ +HGT T +GD E
Sbjct: 2 AEIVGYGATSDGAD--MVAPSGEGAVRCMKMAM---HGVDTPIDYLNSHGTSTPVGDVKE 56
Query: 774 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 833
+ A+ +VF +K+ AI++ K+ GH+ A+G+ I + +++ I S++ E+
Sbjct: 57 LAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 111
Query: 834 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 881
+ N T + +L ++FG GTNA +V+++
Sbjct: 112 DEQAAGLNIV---------TETTDRELTTVMSNSFGFGGTNATLVMRK 150
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 101 bits (253), Expect = 1e-25
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 712 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 771
I A + G G D P G + IK +++ ++PE + Y+ HGT T +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 772 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 831
E A+ V K ++S KS GH A+G V I ++++++ +P +
Sbjct: 62 GESGAIVAVLG------KEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTS 115
Query: 832 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882
+ ++YI + +++ + FG G NA + + +
Sbjct: 116 EVSDYIEANVVY---------GQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 64.3 bits (155), Expect = 9e-12
Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 14/246 (5%)
Query: 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVD 125
K GT L+TGGTG +G + +L + + +L+L RS ++ +L
Sbjct: 7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTV 66
Query: 126 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 185
+ + + ++ IG + + + + + A
Sbjct: 67 AACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGER-----IERASRAKV 121
Query: 186 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 245
N ++ L FSS ++ G G YA GN + A+ + +
Sbjct: 122 LGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGL----- 176
Query: 246 NKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLS 305
+ W W S G F+ + + + L + ++ +V+
Sbjct: 177 -PATAVAWGTWAGSGMAEGPVAD---RFRRHGVIEMPPETACRALQNALDRAEVCPIVID 232
Query: 306 GELEKL 311
++
Sbjct: 233 VRWDRF 238
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 58.3 bits (141), Expect = 7e-10
Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 10/169 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G L+TGG +G + + + L + + + + QVD+
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIG-----GAFFQVDL 57
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
D+ + + + +G +D +++ A I+ S L + VL ++ + L+
Sbjct: 58 EDERERVRFVEEAAYALGRVDVLVNNAAIAAPGS-ALTVRLPEWRRVLEVNLTAPMHLSA 116
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+++K + +S + + + Y + L
Sbjct: 117 LA---AREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL 162
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 3e-08
Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 10/187 (5%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVD 125
G LITG +G L + + L+L + L K K K VD
Sbjct: 7 GEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETA-AKCKGLGAKVHTFVVD 64
Query: 126 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 185
S++ + S + IG + +++ AG+ + +
Sbjct: 65 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF-ATQDPQIEKTFEVNVLAHFWTT 123
Query: 186 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 245
A + + KN + +S++ + Y + K L ++
Sbjct: 124 KAF---LPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDE--LAALQ 178
Query: 246 NKLITIN 252
+
Sbjct: 179 ITGVKTT 185
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (127), Expect = 5e-08
Identities = 32/188 (17%), Positives = 72/188 (38%), Gaps = 16/188 (8%)
Query: 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN-KAIYIQV 124
G L+TG +G F++ L+ K + L + ++F K ++IQ
Sbjct: 3 GKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+D+ ++ ++++ G +D +++ AG++ N KN+ L + I+
Sbjct: 62 DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISG 112
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKY 244
Y + + K + + SS + ++ Y + + +
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSA---ALAANL 169
Query: 245 TNKLITIN 252
N + +N
Sbjct: 170 MNSGVRLN 177
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 52.2 bits (125), Expect = 8e-08
Identities = 22/169 (13%), Positives = 59/169 (34%), Gaps = 6/169 (3%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
+ +ITGG +G ++ ++ ++ ++ + + ++ DV
Sbjct: 4 KDKLAVITGGANGIGRAIAERFA-VEGADIAIADLVPAPEAE-AAIRNLGRRVLTVKCDV 61
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
S + + +I+ G D +++ AGI L E ++ + + +
Sbjct: 62 SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP-FDELTFEQWKKTFEINVDSGFLMAK 120
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
A + +++N + +S++ L Y + + L
Sbjct: 121 AF---VPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRAL 166
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 51.2 bits (122), Expect = 2e-07
Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 15/175 (8%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
+G LITGG LG D + + + + +S +L + + + I
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELE----TDHGDNVLGIVG 58
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANY----KNFYSVLSSKISG 180
DV + + G ID ++ AGI ++ +++ F V + G
Sbjct: 59 DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 181 TIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
I A L V + S++ + G Y + L
Sbjct: 119 YIHAVKAC----LPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 50.5 bits (120), Expect = 3e-07
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 9/176 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
T ++TGG +G+ F+ + N+ + RS + K K+F K Q
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DVS+ + I I ++GPI G++ AG+S + E +++F V + G
Sbjct: 67 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP-ATELTHEDFAFVYDVNVFGVFNT 125
Query: 185 NYALENTILKLQK-----NKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
A+ L+ Q+ + S++ G Y + K L
Sbjct: 126 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 50.5 bits (120), Expect = 3e-07
Identities = 34/179 (18%), Positives = 69/179 (38%), Gaps = 10/179 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVD 125
G L TG +G + L + ++ ++ G S K + +LKK + + IQ D
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 64
Query: 126 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 185
+S ++++ + +++ G +D V+ +G+ + LE + F V + G +
Sbjct: 65 ISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVA 123
Query: 186 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 240
LK + + S ++ + G YA F +A K +
Sbjct: 124 Q----QGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 178
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 50.0 bits (119), Expect = 5e-07
Identities = 23/171 (13%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
QG L+TGG +G+ L+ + + S + + + ++++++
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLA----AELGERSMFVRH 59
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DVS + + ++ +G ++ +++ AGI ++ ++F +L
Sbjct: 60 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIG 118
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ K + +S S+ L Y+ + +
Sbjct: 119 CQQG----IAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAA 165
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (117), Expect = 9e-07
Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 8/169 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G ++TGG +G + +++ + + + L++ A++I DV
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFV-NSGARVVICDKDESGG---RALEQELPGAVFILCDV 60
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
+ + + + ++ I G +D V++ AG E + + F +L + GT Y
Sbjct: 61 TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT----Y 116
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
L L + V SS +G + Y T K L
Sbjct: 117 TLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKAL 165
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 48.9 bits (116), Expect = 1e-06
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
+G L+TGG+ LG + L +++++ R+ + + K +K+ + + +
Sbjct: 4 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSV 173
DVS+ ++ + ++ G +D V++ AGI+ E F V
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP-AEEFPLDEFRQV 110
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 48.5 bits (115), Expect = 1e-06
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 14/171 (8%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN--KAIYIQV 124
+ LITG +G + K L+ + L++ A + +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFA-KEGARLVACDIEE------GPLREAAEAVGAHPVVM 56
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+D + + ++G +DGV+H AGI+ + + +++ VL ++G+ +
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLV 115
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
A + + K ++S LG+ G +YA + L
Sbjct: 116 AKAASEAM----REKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTL 162
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 3e-06
Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 13/201 (6%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 129
L+TGG +G+ L +S +++L+ R + + + ++L+ + Q+D+ D
Sbjct: 7 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-QQLQAEGLSPRFHQLDIDDL 65
Query: 130 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE 189
+ + + + G +D +++ AGI+ + + + + GT + L
Sbjct: 66 QSIRALRDFLRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTEL- 123
Query: 190 NTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY----LNNKNIYKKYT 245
L L K + V SS ++ + L NK +
Sbjct: 124 ---LPLIKPQ-GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179
Query: 246 NKLITINWPLWNNSKFKIGNN 266
WP KIG
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVT 200
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 47.3 bits (112), Expect = 3e-06
Identities = 27/172 (15%), Positives = 65/172 (37%), Gaps = 9/172 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
+ T L+TGGT +G + + + R+ +LN + K +K +
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFA-GFGAVIHTCARNEYELNECL-SKWQKKGFQVTGSVC 64
Query: 125 DVSDKLKMISEINSIINNI-GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 183
D S + + + ++ + G +D +++ G + L+ ++F +S+ +
Sbjct: 65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYH 123
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
L+ L+ + + + SS + ++ Y+ A+ L
Sbjct: 124 LSQLA---HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNL 172
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 47.3 bits (112), Expect = 4e-06
Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 9/187 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G +ITGGT +G+ + + + + ++++GR K ++ + Q D
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
SD+ ++ GP+ +++ AGI+ ++ E + +L+ + G
Sbjct: 64 SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 187 ALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 245
I +++ L + SS +GD Y + +K K Y
Sbjct: 123 LG---IQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179
Query: 246 NKLITIN 252
+ +N
Sbjct: 180 ---VRVN 183
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 47.0 bits (111), Expect = 5e-06
Identities = 15/93 (16%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
G +ITG +G + ++++S + N ++ ++++ +A +
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVV-DEIQQLGGQAFACRC 67
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 157
D++ + ++ + + I+ +G +D +++ AG G
Sbjct: 68 DITSEQELSALADFAISKLGKVDILVNNAGGGG 100
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 47.4 bits (112), Expect = 6e-06
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 72 LITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 130
LITGG G +G ++I T + + + ++ +N+ + D+ D
Sbjct: 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS- 62
Query: 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL-NYALE 189
+EI I P D V+H+A S ++ + + + + I GT AL A +
Sbjct: 63 ---AEITRIFEQYQP-DAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARK 113
Query: 190 NTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220
+ K +F + S+ + GD D
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPD 144
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.5 bits (110), Expect = 7e-06
Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 11/176 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSII--YKKLKKFNNKAIYI 122
+ITG + +G + + + ++GR +L +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 123 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS---GLTSNILEANYKNFYSVLSSKIS 179
DV+ +++ + G +D +++ AG + + + +++ + L+ +
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122
Query: 180 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
IAL + L K + V S +S + Y++ Y +
Sbjct: 123 SVIALTKKA---VPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNT 175
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 46.3 bits (109), Expect = 8e-06
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 12/188 (6%)
Query: 58 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI--IYKKLKKF 115
KD + G +ITG + LG + ++++ RSK + + +++KK
Sbjct: 3 KDLE------GKVVVITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLEEIKKV 55
Query: 116 NNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLS 175
+AI ++ DV+ + +I+ + S I G +D +++ AG+ S+ E + ++ V+
Sbjct: 56 GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVID 114
Query: 176 SKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG--NRFQTVYAK 233
+ ++G + ++ F + G A
Sbjct: 115 TNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLAL 174
Query: 234 YLNNKNIY 241
K I
Sbjct: 175 EYAPKGIR 182
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 45.9 bits (108), Expect = 9e-06
Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 10/169 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G T L+TG +G D + +L+ R + ++ + + +AI + DV
Sbjct: 4 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREE--RLLAEAVAALEAEAIAVVADV 60
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
SD + + + G + GV H AG++ + + + L
Sbjct: 61 SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL-------RVNLTG 113
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ + + + S A LG FG YA G A+ L
Sbjct: 114 SFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL 162
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (109), Expect = 1e-05
Identities = 20/169 (11%), Positives = 61/169 (36%), Gaps = 14/169 (8%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYK-KLKKFNNKAIYIQ 123
+ L+TG +G +G + L+ + ++ R+ + + + K + I +
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 124 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 183
D+S++ ++S ++I + +D ++ AG+ +L + + + + +
Sbjct: 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLALSI 126
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 232
++ + + + +S S + Y+
Sbjct: 127 CTREAYQSMKERNVDDGHIIN-INSMSGHRV--------LPLSVTHFYS 166
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.7 bits (108), Expect = 1e-05
Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 11/169 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G L+TG +G L ++ R+ + L K + VD+
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDL---VSLAKECPGIEPVCVDL 59
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
D + IGP+D +++ A + + LE + F S + ++
Sbjct: 60 GDW----DATEKALGGIGPVDLLVNNAALVIMQP-FLEVTKEAFDRSFSVNLRSVFQVSQ 114
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ ++ + + SS A + Y+ T+ K +
Sbjct: 115 MVARDMIN--RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM 161
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
G L+TG G +G+ + L + T + L + L +++ +A
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAE-ASVREKGVEARSYVC 61
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV+ + +I ++S++ + G ID + + AG G + + + +F V
Sbjct: 62 DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV---LTINVTGA 118
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ L+ ++ + +S + + G Y +
Sbjct: 119 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETA 169
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 45.1 bits (106), Expect = 2e-05
Identities = 37/182 (20%), Positives = 57/182 (31%), Gaps = 11/182 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN-KAIYIQ 123
LITGG LG + L L L S L + L+ + + +
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 124 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 183
DVSD+ ++ + + + G IDG + AGI G + F V+S + G
Sbjct: 62 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR----FQTVYAKYLNNKN 239
+ + + V +S I G YA A
Sbjct: 122 GLEKVLKIMREQGSG---MVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178
Query: 240 IY 241
I
Sbjct: 179 IR 180
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.0 bits (106), Expect = 2e-05
Identities = 23/173 (13%), Positives = 54/173 (31%), Gaps = 9/173 (5%)
Query: 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN-KAIYIQVDVSD 128
T ++T GM + L + S K+ + Y Q+
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESF------KQKDELEAFAETYPQLKPMS 54
Query: 129 KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYAL 188
+ + I ++ + G +D ++ + I + +++ + + AL A+
Sbjct: 55 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 189 ENTILKLQKNKLDFVCYFSS-SSAILGDFGSCDYAMGNRFQTVYAKYLNNKNI 240
+ + K + + F+ + + A +K L NI
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 167
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 45.0 bits (106), Expect = 2e-05
Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 11/176 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSI--IYKKLKKFNNKAIYI 122
T +ITG + +G + + N+ ++GRS +L I K + +
Sbjct: 4 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 123 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS---GLTSNILEANYKNFYSVLSSKIS 179
DV+ + INS + G ID +++ AG + + + ++ L +
Sbjct: 63 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122
Query: 180 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
I + + L +K + V S + YA+ Y +
Sbjct: 123 AVIEMTKKV---KPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRST 175
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 45.0 bits (106), Expect = 2e-05
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G T +ITGG LG + + ++L+ ++ + A Y +DV
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGA--ATARELGDAARYQHLDV 60
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
+ + + G +DG+++ AGIS E + + F V+ ++G
Sbjct: 61 TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVVEINLTGVFIGMK 119
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ I ++ + SS++ ++G + Y +K
Sbjct: 120 TV---IPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLA 165
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (103), Expect = 4e-05
Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 11/169 (6%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
G L+TG +G L ++ R++ + L + + VD+
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADL---DSLVRECPGIEPVCVDL 61
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
D + ++GP+D +++ A + L LE + F + I ++
Sbjct: 62 GDW----EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ ++ + + SS + Y + K +
Sbjct: 117 IVARGLIA--RGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM 163
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 43.7 bits (102), Expect = 4e-05
Identities = 16/124 (12%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 70 TYLITGGTGRLGMLFSDYLINK-YSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDV 126
+ ++TG +G+ L+ ++I + R K + +++ + + V
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKDSRVHVLPLTV 60
Query: 127 SDKLKMISEINSIINNIG--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
+ + + ++ + +G + +++ AG+ E N L + + L
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120
Query: 185 NYAL 188
L
Sbjct: 121 TQKL 124
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 43.5 bits (102), Expect = 6e-05
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 8/179 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
Q +ITGG G +G + + +Y ++++ + + + ++ DV
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFV-RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALN 185
+ + + +++ I G +D + G+ T +ILEA ++F V+ + G +
Sbjct: 64 TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 123
Query: 186 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 240
+ + K V S SS G+ S Y T L I
Sbjct: 124 KHA--ARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 43.5 bits (102), Expect = 6e-05
Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 9/160 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
+G T L+TGG+ +G + L + ++ R+ +LN + + + K
Sbjct: 7 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCL-TQWRSKGFKVEASVC 64
Query: 125 DVSDKLKMISEINSIINNI-GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 183
D+S + + +N++ N+ G ++ +++ AGI + +++ ++S
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYH 123
Query: 184 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223
L+ + + ++ V + SS S L Y
Sbjct: 124 LSVLAHPFL---KASERGNVVFISSVSGALAVPYEAVYGA 160
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 42.8 bits (100), Expect = 1e-04
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 4/124 (3%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI--IYKKLKKFNNKAIYIQV 124
+G L+TG +G + L + +I++ + S + +KK + A ++
Sbjct: 17 EGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
+V ++ + G +D V +G+ + + + F V + G +
Sbjct: 76 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH-VKDVTPEEFDRVFTINTRGQFFV 134
Query: 185 NYAL 188
Sbjct: 135 AREA 138
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.7 bits (100), Expect = 1e-04
Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 67 QGGTYLITGGTGRLGMLFSDYL--------INKYSTNLILSGRSKLNSIIYKKLKKFNNK 118
G L+TG G LG ++ +N + G+ S K +++ +
Sbjct: 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGS--SAADKVVEEIRRR 63
Query: 119 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 178
+ + + ++ G ID V++ AGI S + +++ + +
Sbjct: 64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRS-FSRISDEDWDIIQRVHL 122
Query: 179 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
G+ + A ++K + +S+S I G+FG +Y+ A L
Sbjct: 123 RGSFQVTRA---AWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTL 176
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} Length = 86 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Score = 39.2 bits (91), Expect = 2e-04
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 336 FIENDIKNHICNILNTKK----SEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSI 391
+D++ + S + + D G+DS++L E + L Y + I +
Sbjct: 5 LTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDV 64
Query: 392 FFSYSTLERLITY 404
T L+
Sbjct: 65 AGRVDTPRELLDL 77
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 41.3 bits (96), Expect = 3e-04
Identities = 16/85 (18%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 129
L+TG +G + L+ K + ++ + ++ ++ + A+ ++VDVSD+
Sbjct: 5 LVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVA-SEINQAGGHAVAVKVDVSDR 62
Query: 130 LKMISEINSIINNIGPIDGVLHIAG 154
++ + + +G D +++ AG
Sbjct: 63 DQVFAAVEQARKTLGGFDVIVNNAG 87
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 41.2 bits (96), Expect = 3e-04
Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 129
L+TG T +G+ + L + + + R L + + K+L++ +A DV
Sbjct: 6 LVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTL-KELREAGVEADGRTCDVRSV 63
Query: 130 LKMISEINSIINNIGPIDGVLHIAG 154
++ + + +++ GP+D +++ AG
Sbjct: 64 PEIEALVAAVVERYGPVDVLVNNAG 88
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAI-YIQVDVSDKL 130
L+TGG+G +G L+ +IL + +++ K +++ D+ ++
Sbjct: 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63
Query: 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNI 162
M I + ID V+H AG+ + ++
Sbjct: 64 LMTE-----ILHDHAIDTVIHFAGLKAVGESV 90
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 40.8 bits (95), Expect = 5e-04
Identities = 22/180 (12%), Positives = 54/180 (30%), Gaps = 15/180 (8%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVD 125
+ G +G+ S L+ + N ++ R ++ K + D
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYD 63
Query: 126 VSDKLKMISE-INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
V+ + + + I + + +D +++ AGI + ++ +G +
Sbjct: 64 VTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNT 114
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 240
A+ + K + + S + Y+ F AK +
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.7 bits (92), Expect = 0.001
Identities = 13/93 (13%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
G L++GG +G ++ + ++ + ++ + + A Y+ +
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMA----AELADAARYVHL 59
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 157
DV+ + + +++ + G + +++ AGI
Sbjct: 60 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN 92
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Score = 36.8 bits (85), Expect = 0.001
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 359 NKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 404
+ D G+DS++L E + +L + Y + + T L+
Sbjct: 29 DTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDE 74
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 39.8 bits (92), Expect = 0.001
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 72 LITGGTGRLGMLFSDYLINKYST-----NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 126
LITG TG+ G +++L+ K S ++ IY+ N K D+
Sbjct: 5 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64
Query: 127 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 186
SD + + + D V ++ +S + ++++ GT+ L
Sbjct: 65 SDTSNLTRILREV-----QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRL-- 112
Query: 187 ALENTILKLQKNKLDFVCYFSSSSAILGD 215
LE + K F +S+S + G
Sbjct: 113 -LEAIRFLGLEKKTRFY--QASTSELYGL 138
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 0.001
Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 9/167 (5%)
Query: 59 DFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFN 116
+F+ ++ G ++TG + +G + +L K +++++ RS L ++ L+
Sbjct: 6 EFRPEMLQ-GKKVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLELGA 63
Query: 117 NKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSS 176
A YI + D + +G +D + + I+ + N+ + + +
Sbjct: 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDML-ILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 177 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223
+ L A L + K + SS + + Y+
Sbjct: 123 NFLSYVVLTVAA----LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSA 165
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} Length = 74 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Score = 35.9 bits (83), Expect = 0.001
Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 337 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSY 395
+ I + L ++++ + D G D + + E L + ++I
Sbjct: 4 TLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKI 63
Query: 396 STLERLITY 404
+T+ + Y
Sbjct: 64 ATVGDAVNY 72
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 38.9 bits (90), Expect = 0.002
Identities = 35/175 (20%), Positives = 74/175 (42%), Gaps = 9/175 (5%)
Query: 72 LITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKL 130
++TG + +G + L L+ RS K + K+++ + +AI DVS +
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64
Query: 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN 190
+ + + + I+ G ID V++ AGI+ + ++ + V+ ++G A
Sbjct: 65 DVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAA-- 121
Query: 191 TILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNIY 241
+ K + + +S ++G+ G +YA F A+ ++NI
Sbjct: 122 -TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNIN 175
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.9 bits (90), Expect = 0.002
Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 9/174 (5%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSII--YKKLKKFNNKAIYI 122
G + +ITG + +G + K + ++GR+ +L K K +
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFA-KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 123 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSN-ILEANYKNFYSVLSSKISGT 181
DV++ IN+ + G ID +++ AG + + + +
Sbjct: 62 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 182 IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
I + + L K K + V S + G YA Y +
Sbjct: 122 IEMTQKTKE---HLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 172
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (89), Expect = 0.003
Identities = 17/108 (15%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 58 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK------LNSIIYKK 111
+ + + QG ++TGG +G L+ + +N++++ R + +
Sbjct: 2 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELL-ELGSNVVIASRKLERLKSAADELQANL 60
Query: 112 LKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLT 159
+ I IQ ++ ++ ++ + + S ++ G I+ +++ G L+
Sbjct: 61 PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 108
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 38.2 bits (88), Expect = 0.003
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 72 LITGGTGRLGMLFSDYL------INKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQ 123
LITG +G + + L+LS R+ L I + + I
Sbjct: 5 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-SLECRAEGALTDTIT 63
Query: 124 VDVSDKLKMISEINSIINNIGPIDGVLH 151
D+SD + I+ G ID +++
Sbjct: 64 ADISDMADVRRLTTHIVERYGHIDCLVN 91
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 38.3 bits (88), Expect = 0.003
Identities = 15/88 (17%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQ 123
+G ++TG T +G+ + L + +++L+G ++ + + K +Y
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 124 VDVSDKLKMISEINSIINNIGPIDGVLH 151
D+S + +++ + +G ID +++
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVN 89
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 38.2 bits (88), Expect = 0.003
Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 6/171 (3%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
QG ITGG LG + L +++ R L + + + NK IQ
Sbjct: 24 QGKVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82
Query: 125 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 184
DV D + + ++ +I G + V++ A S + + ++ ++GT +
Sbjct: 83 DVRDPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLNGTAFV 141
Query: 185 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 235
+ ++K K ++ A G A +K L
Sbjct: 142 TLEIGKQLIK--AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSL 190
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 37.9 bits (87), Expect = 0.004
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 124
G T LITG +G F++ + + + ++ + + + A I +
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATA----AEIGPAACAIAL 58
Query: 125 DVSDKLKMISEINSIINNIGPID 147
DV+D+ + + +++ G ID
Sbjct: 59 DVTDQASIDRCVAELLDRWGSID 81
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1005 | |||
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.98 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.96 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.96 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.96 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.96 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.96 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.96 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.96 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.96 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.96 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.96 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.96 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.96 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.96 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.96 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.96 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.96 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.96 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.96 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.95 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.95 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.95 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.95 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.95 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.95 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.95 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.95 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.95 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.94 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.94 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.94 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.94 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.94 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.94 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.94 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.94 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.93 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.93 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.93 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.93 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.93 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.93 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.93 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.92 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.92 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.92 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.92 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.91 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.91 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.91 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.9 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.9 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.9 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.9 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.87 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.87 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.85 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.85 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.82 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.81 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.81 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.79 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.78 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.72 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.71 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.59 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 99.35 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 99.34 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.3 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 99.29 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 99.28 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 99.26 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 99.2 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 99.15 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.15 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 99.14 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 99.11 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 99.09 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.04 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.04 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 98.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.95 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.92 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.89 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.85 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 98.84 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.83 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.8 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.8 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.79 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.75 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.74 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.73 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.68 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 98.64 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.62 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 98.59 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.59 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.57 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.51 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 98.46 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.42 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.31 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.3 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.27 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.24 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 98.23 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.17 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.12 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 98.05 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 98.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 97.93 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 97.87 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 97.79 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 97.76 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 97.67 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 97.66 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.54 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.37 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 97.13 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 97.08 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 96.82 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.68 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.63 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 96.46 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.28 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 96.16 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.13 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.02 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.96 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.86 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 95.31 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 95.19 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.94 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 94.83 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.74 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 94.65 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.64 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 94.63 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.51 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 94.48 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 94.34 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.17 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.14 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.09 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 93.9 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 93.79 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 93.58 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.17 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 93.02 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.38 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 91.78 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 91.1 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 90.5 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 90.39 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 89.96 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 89.94 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 89.33 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 88.66 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 88.46 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 87.49 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 86.26 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 86.16 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 84.93 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 84.36 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 82.8 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 82.6 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 81.51 |
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.1e-49 Score=413.90 Aligned_cols=199 Identities=25% Similarity=0.377 Sum_probs=185.1
Q ss_pred CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCCceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy612 674 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNP 753 (1005)
Q Consensus 674 ~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~ 753 (1005)
|+|+|||||+++|||++|||++++|||++++|++||++|||+|+|+++++||++.+.+.|++..|.++|+++|++++++|
T Consensus 3 P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~ 82 (205)
T d1tqya2 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA 82 (205)
T ss_dssp GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred CCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCc
Confidence 78999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCc
Q psy612 754 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 833 (1005)
Q Consensus 754 ~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 833 (1005)
+||+|||+|||||++||++|+++|.++|+... .+++|+|+|+++||+++|||+++|+|++++|++|+|||++||+++
T Consensus 83 ~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 159 (205)
T d1tqya2 83 TDIDYINAHGSGTRQNDRHETAAYKRALGEHA---RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS 159 (205)
T ss_dssp GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG---GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred cceeeeeccccccccCchhHHHHHHHhhcccc---CCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCC
Confidence 99999999999999999999999999998643 347899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecccc
Q psy612 834 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 884 (1005)
Q Consensus 834 n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 884 (1005)
||.++++ +++.+.++| +.|+++||||||||+|+|+||++++.
T Consensus 160 ~p~~~~~----~v~~~~~~~-----~~~~a~~~s~GfGG~na~~vl~~~~~ 201 (205)
T d1tqya2 160 DPECDLD----YVPLEARER-----KLRSVLTVGSGFGGFQSAMVLRDAET 201 (205)
T ss_dssp BTTBCSC----CCBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred CCCCCcc----cCCCCCcCC-----CCCEEEEeCCCCCceeEEEEEeeCCC
Confidence 9998775 344444444 35789999999999999999998764
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=9.2e-48 Score=395.17 Aligned_cols=192 Identities=22% Similarity=0.320 Sum_probs=173.7
Q ss_pred CCCCCcCCCCCCCCceecCccEEEEEcccchhhcCCC-ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy612 674 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 752 (1005)
Q Consensus 674 ~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~-~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~ 752 (1005)
|++.|||||+++|||++|||++++|||++++|+++|+ +|||+|.|+++++||.+.. +++.+|+++|++||++++++
T Consensus 2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~---~~~~g~~~~i~~aL~~a~i~ 78 (194)
T d1tqyb2 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTG 78 (194)
T ss_dssp GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC---CCCCSHHHHHHHHHHHHTCC
T ss_pred CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc---cchhhhhhhhhhhccccccc
Confidence 6789999999999999999999999999999999998 5999999999999996532 34456899999999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCC
Q psy612 753 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 832 (1005)
Q Consensus 753 ~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 832 (1005)
|+||+|||+|||||++||++|+++|.++|+.. .++|+|+|+++||+++|||+++|+|++++|++++|||++|+++
T Consensus 79 ~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~-----~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~ 153 (194)
T d1tqyb2 79 PEDVDVVFADGAGVPELDAAEARAIGRVFGRE-----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTS 153 (194)
T ss_dssp GGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCC
T ss_pred ccceeeeeccccCcccccHHHhhhhhhhhhcc-----ccccccccccccccccccccceehhhhhhhhhceeccccCCCC
Confidence 99999999999999999999999999999743 3789999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEecc
Q psy612 833 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 882 (1005)
Q Consensus 833 ~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 882 (1005)
+||.++++ .+.+++++| .+|+++||||||||+|+|+||++|
T Consensus 154 ~~~~~~~~----~v~~~~~~~-----~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 154 VPREYGID----LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp CCGGGCCE----ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCcccCcc----ccCCCCccC-----CCCEEEEECcCCCceeEEEEEeeC
Confidence 99987653 445554444 357899999999999999999987
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=5.1e-44 Score=384.82 Aligned_cols=232 Identities=23% Similarity=0.293 Sum_probs=203.5
Q ss_pred cCcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCCh
Q psy612 462 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 541 (1005)
Q Consensus 462 ~~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 541 (1005)
+++|||||||+++|++.++|+||++|.+|+++|+++| ||+...+ +.++.|.++ ++..+|.+++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~--~~~~~~~-----------~~~~~g~~~----~~~~~~~~~~ 63 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDASDQ-----------ACRFGGEVK----DFDATQFLDR 63 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCC----SCCGGGTSCH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCC--ccccccc-----------cccccceee----ecccccccch
Confidence 3689999999999999999999999999999999877 5654332 345566654 3444567999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHH
Q psy612 542 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSA 608 (1005)
Q Consensus 542 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ 608 (1005)
++.+.|||+++++++++++||+|||+.++.+...++||++|+..+.... ....+........+.+++
T Consensus 64 ~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 143 (250)
T d1e5ma1 64 KEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASG 143 (250)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred hhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhh
Confidence 9999999999999999999999999999999999999999987654211 112333445566778999
Q ss_pred HHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCC
Q psy612 609 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDE 683 (1005)
Q Consensus 609 ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~ 683 (1005)
++++.||++||+++|++|||||+.||++|+++|++|+||++||||++..++|..+..|.++++||. +++|||||+
T Consensus 144 ~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~ 223 (250)
T d1e5ma1 144 LTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDK 223 (250)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBT
T ss_pred hHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999984 578999999
Q ss_pred CCCCceecCccEEEEEcccchhhcCCC
Q psy612 684 RANGLVPSEAVVAVVLKRLSRALSDGD 710 (1005)
Q Consensus 684 ~a~G~~~gEGa~~vvLk~l~~A~~~g~ 710 (1005)
++|||++|||+++||||++++|++||+
T Consensus 224 ~~dG~~~gEGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 224 DRDGFVMGEGSGILILEELESALARGA 250 (250)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence 999999999999999999999999985
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.3e-44 Score=386.22 Aligned_cols=231 Identities=22% Similarity=0.305 Sum_probs=203.3
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|++.++++||++|++|+++|+++| ||+...+ ..++++.+++ |++. ..++++
T Consensus 2 rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~~~v~~---~~~~-~~~~~~ 64 (250)
T d2gfva1 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSAY-----------ATKFAGLVKD---FNCE-DIISRK 64 (250)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTC-----------SCCEEECCTT---CCCT-TTSCHH
T ss_pred CeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCC--ccccccc-----------CCccceeccc---chhh-hhhhhH
Confidence 579999999999999999999999999999999886 5554332 4466777765 4332 347899
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+.+.|||+++++++++++||+|||+..+++...++||++|++.+.... ..+.+..++....+.++++
T Consensus 65 ~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (250)
T d2gfva1 65 EQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGH 144 (250)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999987655311 1233445566778899999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~ 684 (1005)
||+.||++||+++|++||+||+.||++|+++|++|+||+|||||++..++|..+..|..+++||. ++.|||||++
T Consensus 145 ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~ 224 (250)
T d2gfva1 145 LTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKE 224 (250)
T ss_dssp HHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999995 4679999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGD 710 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~ 710 (1005)
+|||++|||++++|||++++|++||+
T Consensus 225 rdG~v~gEGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 225 RDGFVLGDGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred CCCEeeeeEEEEEEECcHHHHHHCcC
Confidence 99999999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.3e-44 Score=385.85 Aligned_cols=230 Identities=23% Similarity=0.328 Sum_probs=199.8
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|++.++++||++|.+|+++|.+++ ||+...+ +.+.++..+ +++..+ +++.
T Consensus 2 ~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~--~~~~~~~-----------~~~~~~~~~----~~~~~~-~~~~ 63 (249)
T d1j3na1 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASAL-----------PVRIAAEVD----VDPGAY-LDRK 63 (249)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTTS-----------SCCEEECCC----CCGGGT-SCHH
T ss_pred CcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCC--ccccccC-----------Ccccccccc----cccccc-ccHH
Confidence 469999999999999999999999999999999776 5654332 223344332 333333 7899
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccc-------------cccccccccccchhHHHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 609 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 609 (1005)
+++.|||++|++++++++||+|||+.++++.+.++|||+|++.+.... ..+++..+.....+.++++
T Consensus 64 ~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (249)
T d1j3na1 64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH 143 (249)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhh
Confidence 999999999999999999999999999999999999999997765321 1233445566777899999
Q ss_pred HHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC-----CCCCcCCCCC
Q psy612 610 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 684 (1005)
Q Consensus 610 is~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~ 684 (1005)
|++.|||+||+++|++||+||++||++|+++|++|+||+|||||++..++|..+..|...++||. +++|||||.+
T Consensus 144 is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~ 223 (249)
T d1j3na1 144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS 223 (249)
T ss_dssp HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred hHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999984 5789999999
Q ss_pred CCCceecCccEEEEEcccchhhcCCC
Q psy612 685 ANGLVPSEAVVAVVLKRLSRALSDGD 710 (1005)
Q Consensus 685 a~G~~~gEGa~~vvLk~l~~A~~~g~ 710 (1005)
+|||++|||++++|||++++|++||+
T Consensus 224 ~dG~v~gEGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 224 RDGFVMGEGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCCEeeEeEEEEEEEccHHHHHHCcC
Confidence 99999999999999999999999985
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=8.4e-41 Score=332.67 Aligned_cols=161 Identities=25% Similarity=0.379 Sum_probs=148.1
Q ss_pred ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
||||+|+|+++|+||++.+.++|++.+|+++|++||++||++|+||+|||+|||||++||++|+.+|+++|+... .+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~---~~ 77 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHA---YN 77 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG---GG
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCC---Cc
Confidence 799999999999999999999999999999999999999999999999999999999999999999999998643 35
Q ss_pred eeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCC
Q psy612 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 870 (1005)
Q Consensus 791 ~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 870 (1005)
++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.+++.. ++.+..+| ..+++++|||||
T Consensus 78 ~~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~a~~nsfGf 148 (161)
T d1e5ma2 78 IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDY----VPGQSRAL-----IVDVALSNSFGF 148 (161)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCC----CBSSCEEC-----CCSEEEEEEEET
T ss_pred ceEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCccc----CcCcccCC-----CCCEEEEeCcCc
Confidence 899999999999999999999999999999999999999999999886553 34555555 357899999999
Q ss_pred CCceEEEEEeccc
Q psy612 871 SGTNAHIVLQEYI 883 (1005)
Q Consensus 871 gG~nah~il~~~~ 883 (1005)
||+|+|+||++|.
T Consensus 149 GG~Na~lvl~~y~ 161 (161)
T d1e5ma2 149 GGHNVTLAFKKYQ 161 (161)
T ss_dssp TTEEEEEEEECCC
T ss_pred CcEeEEEEEeeeC
Confidence 9999999999983
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=4.9e-40 Score=357.35 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=200.5
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCc-CCCCCccceeeeccCC---CCCCCCccCC
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPI-KSSNKINSKWYGSIPG---IDEFDPLFFE 538 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~-~~~~~~~~~~~g~~~~---~~~FD~~~f~ 538 (1005)
++||||||||++|++.++++||++|++|+++|+++|..||+...++.... ........+++++++. ...||..+|.
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 46999999999999999999999999999999999999998776543221 1122344567777643 3345554443
Q ss_pred CChhhhccCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEeeccCCc-------------cccccccccccccchh
Q psy612 539 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSN-------------YQDRLDQVNLTSTHNA 604 (1005)
Q Consensus 539 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-~~~~~~Gv~~g~~~~~~-------------~~~~~~~~~~~~~~~~ 604 (1005)
....+++.....+.+..+|++|+|+.... ....++++.++...... ......+..+++...+
T Consensus 81 ----~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (270)
T d2ix4a1 81 ----NSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (270)
T ss_dssp ----CSTTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred ----hhhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccc
Confidence 34467888888888999999999986433 23345666665543321 1122344556677788
Q ss_pred HHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC------CCCC
Q psy612 605 ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGKC 678 (1005)
Q Consensus 605 ~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~------~g~~ 678 (1005)
++++|||+.||++||+++|++|||||+.||++|+++|++|+||+|||||++..+.|..+..|...++||. +++|
T Consensus 157 ~~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~ 236 (270)
T d2ix4a1 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (270)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred hhHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974 5789
Q ss_pred cCCCCCCCCceecCccEEEEEcccchhhcCCCce
Q psy612 679 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPI 712 (1005)
Q Consensus 679 ~pfd~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I 712 (1005)
||||+++|||++|||++++|||++++|++|||+|
T Consensus 237 rPFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 9999999999999999999999999999999997
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.1e-40 Score=329.04 Aligned_cols=160 Identities=22% Similarity=0.394 Sum_probs=144.0
Q ss_pred ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
||||+|+|+++|+||++.+.++|++.+|.++|+++|++++++|+||+|||+|||||++||++|++||.++|+... .+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~---~~ 77 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA---SR 77 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG---TT
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccc---cc
Confidence 799999999999999998889999999999999999999999999999999999999999999999999998643 45
Q ss_pred eeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCC
Q psy612 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 870 (1005)
Q Consensus 791 ~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 870 (1005)
|+|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.+.+...+ .+..+| ..+|+++||||||
T Consensus 78 ~~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~a~vnsfGf 149 (161)
T d2gfva2 78 VLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP----HEARQV----SGMEYTLCNSFGF 149 (161)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCB----SSCEEC----SSCCEEEEEEEEG
T ss_pred ceeccccccccccHHHHHHHHHHHHHHHhcCCEeccccccccccccccccccc----ccCccC----CCCcEEEEeCcCc
Confidence 89999999999999999999999999999999999999999999977554322 222222 3468899999999
Q ss_pred CCceEEEEEec
Q psy612 871 SGTNAHIVLQE 881 (1005)
Q Consensus 871 gG~nah~il~~ 881 (1005)
||+|+|+|||+
T Consensus 150 gG~Na~lil~~ 160 (161)
T d2gfva2 150 GGTNGSLIFKK 160 (161)
T ss_dssp GGEEEEEEEEC
T ss_pred cceeEEEEEEE
Confidence 99999999996
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.4e-39 Score=345.40 Aligned_cols=231 Identities=21% Similarity=0.228 Sum_probs=189.8
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|++.++++||++|++|+++|+++|. |+...+ ..+.++.+ +.+...+ +...
T Consensus 2 ~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~--~~~~~~-----------~~~~~~~~---~~~~~~~--~~~~ 63 (253)
T d2vbaa1 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQE--LKDSGM-----------RSHVWGNV---KLDTTGL--IDRK 63 (253)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH--HHHTTC-----------SCCEEECC---CCCCTTS--SCHH
T ss_pred CcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCc--cccccC-----------cccccccc---ccccccc--ccch
Confidence 4799999999999999999999999999999998874 222211 11222222 1222333 5778
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEeeccCCccc--------------cccccccccccchhHHH
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILS 607 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~-~~~~~Gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a 607 (1005)
+.+.+|+..++.+.++.+|++|+|+..... ...++|+++|...+.... ...++..++....+.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 143 (253)
T d2vbaa1 64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS 143 (253)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred hhccchhhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhcccccccc
Confidence 899999999999999999999999975443 456899999987664211 11233445666778999
Q ss_pred HHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC------CCCCCcCC
Q psy612 608 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 681 (1005)
Q Consensus 608 ~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls------~~g~~~pf 681 (1005)
++||+.||++||+++|++|||||++||++|+++|++|+||+|||||++.+..+ ....|..++.++ |+++||||
T Consensus 144 ~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~-~~~~~~~~~~ls~~~~~~P~~~~rPF 222 (253)
T d2vbaa1 144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPEKASRTY 222 (253)
T ss_dssp HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HHHHHHHTTCBCCSCTTSGGGSCCTT
T ss_pred ceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcc-hhhhHHHHHHHhcCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999975544 566788888876 47899999
Q ss_pred CCCCCCceecCccEEEEEcccchhhcCCCce
Q psy612 682 DERANGLVPSEAVVAVVLKRLSRALSDGDPI 712 (1005)
Q Consensus 682 d~~a~G~~~gEGa~~vvLk~l~~A~~~g~~I 712 (1005)
|+++|||++|||++++|||++++|++|||+|
T Consensus 223 D~~~~G~v~gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence 9999999999999999999999999999997
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-39 Score=323.98 Aligned_cols=158 Identities=28% Similarity=0.421 Sum_probs=144.0
Q ss_pred ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
||||+|+|+++|+||++.+.++|++.+|.++|++||++||++|+||+|||+|||||++||++|+.||.++|+... ++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~---~~ 77 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHA---KR 77 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHH---TT
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcC---CC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999997643 34
Q ss_pred eeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCC
Q psy612 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 870 (1005)
Q Consensus 791 ~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 870 (1005)
|+|+|+|+++||+++|||+++++|++++|++++|||++|++++||.+++...+ |+.. .++|+++||||||
T Consensus 78 ~~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~---------~~~~-~~~~~a~v~sfGf 147 (159)
T d1j3na2 78 LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP---------EPRE-AKVDYALSNSFAF 147 (159)
T ss_dssp CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS---------SCEE-CCCSEEEEEEECT
T ss_pred ceEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC---------cccC-CCCCEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999987654322 3221 2468899999999
Q ss_pred CCceEEEEEec
Q psy612 871 SGTNAHIVLQE 881 (1005)
Q Consensus 871 gG~nah~il~~ 881 (1005)
||+|+|+|||+
T Consensus 148 gG~Na~~vl~k 158 (159)
T d1j3na2 148 GGHNAVLAFKR 158 (159)
T ss_dssp TSEEEEEEEEC
T ss_pred CceeEEEEEEE
Confidence 99999999985
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.9e-39 Score=319.34 Aligned_cols=157 Identities=23% Similarity=0.384 Sum_probs=144.3
Q ss_pred ceEEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 711 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 711 ~I~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
+|||+|+|+++|+||++...++|++.+|.++|++||++++++|+||+|||+|||||++||++|+.+|.++|+. .
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~------~ 74 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------E 74 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS------S
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC------c
Confidence 5999999999999999988899999999999999999999999999999999999999999999999999974 2
Q ss_pred eeEeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCC
Q psy612 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 870 (1005)
Q Consensus 791 ~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 870 (1005)
++|+|+|+++||+++|||+++++|++++|++++|||++|++++||.+++. ++..+.++| +.|+++||||||
T Consensus 75 ~~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~a~~nsfGf 145 (158)
T d1ox0a2 75 VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----VVYGQGLEK-----EIPYAISNTFGF 145 (158)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE----ECBSSCEEC-----CCSEEEEEEEET
T ss_pred ccCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcc----cccCccccC-----CCCEEEEeCcCC
Confidence 78999999999999999999999999999999999999999999988643 344444443 457899999999
Q ss_pred CCceEEEEEecc
Q psy612 871 SGTNAHIVLQEY 882 (1005)
Q Consensus 871 gG~nah~il~~~ 882 (1005)
||+|+|+||++|
T Consensus 146 GG~Na~lvl~~~ 157 (158)
T d1ox0a2 146 GGHNAVLAFKRW 157 (158)
T ss_dssp TTEEEEEEEECC
T ss_pred CcEeEEEEEEec
Confidence 999999999988
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=1.3e-38 Score=317.11 Aligned_cols=160 Identities=25% Similarity=0.390 Sum_probs=141.3
Q ss_pred EEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCcee
Q psy612 713 HAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 792 (1005)
Q Consensus 713 ~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ 792 (1005)
||+|.|+++|+||++...+.|++.+|..+|+++|++++++|+||+|||+|||||++||++|+++|+++|+.... ..+|+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~-~~~~~ 79 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHAT-SGTLA 79 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHH-TSCSE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhccccc-cccee
Confidence 89999999999999755556667778889999999999999999999999999999999999999999986432 34589
Q ss_pred EeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCC
Q psy612 793 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 872 (1005)
Q Consensus 793 igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG 872 (1005)
|+|+|+|+||+++|||+++++|++++|++++|||++|+++|||.++....++. |+. ...+|++++|||||||
T Consensus 80 i~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~a~~nsfGfgG 151 (161)
T d2ix4a2 80 FSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLT-------TSK-KMLVRTAMSNSFGFGG 151 (161)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCS-------SCE-ECCCSEEEEEEEETTT
T ss_pred eeccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccc-------cCC-CCCcCEEEEeCCcccc
Confidence 99999999999999999999999999999999999999999999887765542 221 1236899999999999
Q ss_pred ceEEEEEec
Q psy612 873 TNAHIVLQE 881 (1005)
Q Consensus 873 ~nah~il~~ 881 (1005)
+|+|+||++
T Consensus 152 ~Na~lvl~~ 160 (161)
T d2ix4a2 152 TNASLLFAS 160 (161)
T ss_dssp EEEEEEEEC
T ss_pred eeEEEEEEe
Confidence 999999985
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.4e-37 Score=300.69 Aligned_cols=150 Identities=29% Similarity=0.442 Sum_probs=136.9
Q ss_pred EEEEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCcee
Q psy612 713 HAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 792 (1005)
Q Consensus 713 ~avI~g~~~~~dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~ 792 (1005)
||+|+|+++|+||.+ +++|++++|.++|+++++++ +++|+|||+|||||++||++|++||.++|+.. .++
T Consensus 1 Yaei~G~g~~~Dg~~--~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~-----~~~ 70 (151)
T d2vbaa2 1 YAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK-----SPA 70 (151)
T ss_dssp CEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC-----CCE
T ss_pred CEEEEEEEEecCCCC--CCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC-----Ccc
Confidence 899999999999964 88999999999999999876 67899999999999999999999999999743 368
Q ss_pred EeccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCC
Q psy612 793 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 872 (1005)
Q Consensus 793 igsvK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG 872 (1005)
|+|+|+++||+++|||+++++|++++|++++|||++|+++++|.+ ..+.++++..+|+ ++++++|||||||
T Consensus 71 v~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~----~~~~v~~~~~~~~-----~~~a~~nsfGfGG 141 (151)
T d2vbaa2 71 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA----AGLNIVTETTDRE-----LTTVMSNSFGFGG 141 (151)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC----TTSEECCSCEECC-----CCEEEEEEEETTT
T ss_pred cccchhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccc----ccccccCcCcCCC-----CCEEEEeCCcccc
Confidence 999999999999999999999999999999999999999999864 3456777777774 4789999999999
Q ss_pred ceEEEEEec
Q psy612 873 TNAHIVLQE 881 (1005)
Q Consensus 873 ~nah~il~~ 881 (1005)
+|+|+|||+
T Consensus 142 ~Na~~vl~~ 150 (151)
T d2vbaa2 142 TNATLVMRK 150 (151)
T ss_dssp EEEEEEEEC
T ss_pred eeEEEEEEE
Confidence 999999986
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=3.1e-34 Score=309.70 Aligned_cols=238 Identities=19% Similarity=0.269 Sum_probs=204.7
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 138 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~----~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 138 (1005)
..|+++++||||||++|||+++|++|+++|+++|++++|++ ..+++.+++++.|.++.++.||++|+++++++++.
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence 46899999999999999999999999999999899888863 34567778888899999999999999999999999
Q ss_pred HHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 139 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 139 i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
+.+. +++|+||||||+.. +.++.+++.++|++++++|+.|+++++++ +...+.++||++||+++..|.+++
T Consensus 84 i~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~-------~~~~~~~~iv~~SS~a~~~g~~~~ 154 (259)
T d2fr1a1 84 IGDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHEL-------TRELDLTAFVLFSSFASAFGAPGL 154 (259)
T ss_dssp SCTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHH-------HTTSCCSEEEEEEEHHHHTCCTTC
T ss_pred cccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHH-------hhccCCceEeeecchhhccCCccc
Confidence 8654 69999999999998 88999999999999999999999999887 455678999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++|+++|+|+++|+++++.+|+ ++++|+||+|.++||.... ....++..|+.+|+++++++.|..++..+.
T Consensus 155 ~~YaAaka~l~~la~~~~~~Gi------~v~~I~pg~~~~~g~~~~~---~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSDGL------PATAVAWGTWAGSGMAEGP---VADRFRRHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTC------CCEEEEECCBC---------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHhCCC------CEEECCCCcccCCccccch---HHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999999999887 8999999999999997542 223456778999999999999999999988
Q ss_pred hhhhhhchhhHHHHHHHhhc
Q psy612 299 IQYLVLSGELEKLNQIINNI 318 (1005)
Q Consensus 299 ~~~~v~~~~~~~~~~~~~~~ 318 (1005)
.+.++.+.+|.++...+...
T Consensus 226 ~~~~v~~~d~~~~~~~~~~~ 245 (259)
T d2fr1a1 226 VCPIVIDVRWDRFLLAYTAQ 245 (259)
T ss_dssp SSCEECEECHHHHHHHHTSS
T ss_pred ceEEEEeCcHHHHHHhhhcc
Confidence 88888899998776655443
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.9e-33 Score=291.72 Aligned_cols=192 Identities=19% Similarity=0.309 Sum_probs=167.4
Q ss_pred EEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChhhh
Q psy612 465 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEA 544 (1005)
Q Consensus 465 IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea 544 (1005)
||||||||++|++.++++||++|++|+++|++++ ||+...+ ..+.+|.++ .||+.++ +++++.
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~--~~~~~~~-----------~~~~~~~~~---~~~~~~~-~~~~~~ 64 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRY-----------PATLAGQID---DFHAPDH-IPGRLL 64 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGS-----------SCCEEECCC---SCCHHHH-SCTTTG
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCc--ccCchhc-----------ccccccccc---ccccccc-CChhHh
Confidence 8999999999999999999999999999999876 5665433 334556654 3666555 899999
Q ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcc-------------ccccccccccccchhHHHHHHH
Q psy612 545 ERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSARLA 611 (1005)
Q Consensus 545 ~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ris 611 (1005)
+.|||++|+.+.++++||+|||+.++++...++|+++|+..+... .....+..++....++++++||
T Consensus 65 ~~~~~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia 144 (208)
T d1tqyb1 65 PQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQIS 144 (208)
T ss_dssp GGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHH
T ss_pred hccccccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhh
Confidence 999999999999999999999999999999999999998766421 1123345566677889999999
Q ss_pred HHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCC
Q psy612 612 YFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP 674 (1005)
Q Consensus 612 ~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~ 674 (1005)
+.||++||+++|++||+||+.||++|+++|++| ||+|||||+|..++|..+..|.++|+||.
T Consensus 145 ~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 145 IRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp HHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred hcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999 99999999999999999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.98 E-value=1.3e-32 Score=288.55 Aligned_cols=196 Identities=19% Similarity=0.367 Sum_probs=167.1
Q ss_pred CcEEEEeeccccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeccCCCCCCCCccCCCChh
Q psy612 463 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 542 (1005)
Q Consensus 463 ~~IaIvG~~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 542 (1005)
++|||||||+++|++.++++||++|++|+++|+++|. |+...+ .+.+.....||...|.++++
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~--~~~~~~---------------~~~~~~~~~~~~~~~~~~~~ 63 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISF--FDPSPY---------------RSQVAAEADFDPVAEGFGPR 63 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCS--SCCTTS---------------SCCEEECCCCCHHHHTCCHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCc--cCCCcc---------------cccccccccccccccccChh
Confidence 4799999999999999999999999999999998873 332211 12222334588888999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCcccc-------------------ccccccccccch
Q psy612 543 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD-------------------RLDQVNLTSTHN 603 (1005)
Q Consensus 543 ea~~mdpq~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~-------------------~~~~~~~~~~~~ 603 (1005)
+++.|||++++++.++++||+|||+.++++.+.++|+++|.+.+..... .......+....
T Consensus 64 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (216)
T d1tqya1 64 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP 143 (216)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred hhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCc
Confidence 9999999999999999999999999999999999999999876542110 111223344556
Q ss_pred hHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCC
Q psy612 604 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD 675 (1005)
Q Consensus 604 ~~~a~ris~~~~l~Gps~~v~taCsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~ 675 (1005)
+.++++||+.||++||+++|++||+||+.||++|+++|++|+||+|||||++..++|..+..|++++.||+.
T Consensus 144 ~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 144 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred hHHHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999964
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.96 E-value=5.2e-29 Score=264.59 Aligned_cols=216 Identities=17% Similarity=0.130 Sum_probs=185.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCc------EEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYST------NLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~------~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
+++|||||++|||+++|+.|+++|++ .+++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999997 46666776 455778888888899999999999999999999999999
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+||+||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|
T Consensus 82 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~---~~~G~Ii~isS~~~~~~~~~~~~Y 157 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER---QHSGHIFFITSVAATKAFRHSSIY 157 (240)
T ss_dssp HTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTCHHH
T ss_pred HcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHh---cCCCceEEEechhhcCCCCCChHH
Confidence 9999999999999988 889999999999999999999999999999999764 356899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|.. ++.|......... -..++|+|..+.+..++..+.
T Consensus 158 ~asK~al~~lt~~la~el~--~~gIrvn~i~PG~v-~T~~~~~~~~~~~-------~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 158 CMSKFGQRGLVETMRLYAR--KCNVRITDVQPGAV-YTPMWGKVDDEMQ-------ALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCB-CSTTTCCCCSTTG-------GGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhC--cCCeEEEEeeeCcc-cCchhhhcCHhhH-------hcCCCHHHHHHHHHHHHcCCc
Confidence 9999999999999998854 55678899987755 5556433222211 135789999999988887654
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.96 E-value=3e-29 Score=268.42 Aligned_cols=223 Identities=17% Similarity=0.187 Sum_probs=184.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.|.++.++++|++|+++++++++++.++||+|
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 68999999999999999999999999976555544456678888898888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||... ..++.+.+.++|++++++|+.|++++.++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 89 Dilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~IVnisS~~~~~~~~~~~~Y~asKa 164 (251)
T d2c07a1 89 DILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN---NRYGRIINISSIVGLTGNVGQANYSSSKA 164 (251)
T ss_dssp CEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH---HTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred eeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCccccc---CCCeEEEEECCHHhcCCCCCCHHHHHHHH
Confidence 99999999987 888999999999999999999999999999999764 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.....+. .....+...+. ..+|+|...++..++..
T Consensus 165 al~~ltr~lA~el~--~~gIrVN~V~PG~v-~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 233 (251)
T d2c07a1 165 GVIGFTKSLAKELA--SRNITVNAIAPGFI-SSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 233 (251)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSB-CC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEccCCE-ecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999998865 45678888887766 45554433222 22223333332 34788888887776643
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.96 E-value=7.4e-29 Score=266.65 Aligned_cols=236 Identities=15% Similarity=0.120 Sum_probs=190.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+ ..+++.+++++.+.++.+++||++|+++++++++++.++||+
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999997666555543 456778888888999999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ....+.||++||+++..+.+++..|+++|
T Consensus 86 iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~--~~~g~~Iv~isS~~~~~~~~~~~~Y~asK 162 (261)
T d1geea_ 86 LDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcc--ccccccccccccchhcccCccccccccCC
Confidence 999999999988 788999999999999999999999999999999853 33456799999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHhccc---
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLIQDK--- 298 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~~~--- 298 (1005)
+++.+|++.++.+.. ..++++.+|.+|.. ++.|..... +......+...+. ..+|+|...++..++....
T Consensus 163 aal~~lt~~lA~e~~--~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~i 239 (261)
T d1geea_ 163 GGMKLMTETLALEYA--PKGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239 (261)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSB-CSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred ccchhhHHHHHHHhh--hhCcEEEEEeeCcC-cCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence 999999999998865 45578889988766 455543221 1111122222232 3478898888877664332
Q ss_pred -hhhhhhchhh
Q psy612 299 -IQYLVLSGEL 308 (1005)
Q Consensus 299 -~~~~v~~~~~ 308 (1005)
.+.+.+++.+
T Consensus 240 tG~~i~vDGG~ 250 (261)
T d1geea_ 240 TGITLFADGGM 250 (261)
T ss_dssp CSCEEEESTTG
T ss_pred cCCeEEECCCe
Confidence 2344555554
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.96 E-value=4.7e-29 Score=265.65 Aligned_cols=223 Identities=16% Similarity=0.203 Sum_probs=186.8
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+++|||||++|||+++|+.|+++|+++++..+|++ ..+++.+++++.+.++.+++||++|+++++++++++.++||+||
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999998877777764 45677788888899999999999999999999999999999999
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
++|||||... ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..|.++++.|+++|++
T Consensus 82 iLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 157 (244)
T d1edoa_ 82 VVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK---KRKGRIINIASVVGLIGNIGQANYAAAKAG 157 (244)
T ss_dssp EEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred cccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHH---cCCcEEEEEcChhhcCCCCCCHHHHHHHHH
Confidence 9999999988 889999999999999999999999999999999764 356899999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhccc
Q psy612 228 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 228 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+.+|++.++.+.. ..++++.+|.+|.. ++.|........ +...+...+ +..+|+|....+..+..++.
T Consensus 158 l~~ltk~lA~el~--~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~ 227 (244)
T d1edoa_ 158 VIGFSKTAAREGA--SRNINVNVVCPGFI-ASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA 227 (244)
T ss_dssp HHHHHHHHHHHHH--TTTEEEEEEEECSB-CSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred HHHChHHHHHHHh--hhCcEEEEEeccee-ccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCch
Confidence 9999999998865 55678889988766 455543332222 222222223 24578998888887644444
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.96 E-value=4.1e-29 Score=268.60 Aligned_cols=224 Identities=13% Similarity=0.116 Sum_probs=183.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.+.++.+++||++|+++++++++++.++||+|
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999999999976666554466778888899889999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|. +.+...+.||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~-~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKa 158 (257)
T d2rhca1 81 DVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGG-MLERGTGRIVNIASTGGKQGVVHAAPYSASKH 158 (257)
T ss_dssp SEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTS-HHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHH-HHhcCCcccccccccccccccccchhHHHHHH
Confidence 99999999988 78999999999999999999999999999999743 12234688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCCC-CCCHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQK-VLHENDGLKLFEQL 293 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~~-~l~~~~~~~~l~~~ 293 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.... ++..+...+...+. ..+|+|....+..+
T Consensus 159 al~~ltk~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL 235 (257)
T d2rhca1 159 GVVGFTKALGLELA--RTGITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 235 (257)
T ss_dssp HHHHHHHHHHHHTT--TSEEEEEEEEECSB-CSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEeeCCC-CCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999998865 45678889988765 45553211 11111222222222 34678877777766
Q ss_pred Hh
Q psy612 294 LI 295 (1005)
Q Consensus 294 l~ 295 (1005)
+.
T Consensus 236 ~S 237 (257)
T d2rhca1 236 IG 237 (257)
T ss_dssp TS
T ss_pred hC
Confidence 54
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.96 E-value=8.9e-29 Score=264.07 Aligned_cols=220 Identities=13% Similarity=0.073 Sum_probs=175.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++. .|++. ++..+.+++.|.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~-~~~~~-~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIA-DLVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCch-HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999976555 44432 44556677888999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 82 DilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 157 (247)
T d2ew8a1 82 DILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR---NGWGRIINLTSTTYWLKIEAYTHYISTKA 157 (247)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHh---cCCCCccccccchhcccCcccccchhhhc
Confidence 99999999987 889999999999999999999999999999999764 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh--hhHHHHh-cCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYFKS-SKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~~~-~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|....... .+...+. ..+ +..+|+|....+..++.
T Consensus 158 al~~ltk~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S 227 (247)
T d2ew8a1 158 ANIGFTRALASDLG--KDGITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 227 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhC
Confidence 99999999998865 455788889887653 4443221111 0110000 111 23478888888777654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=5.4e-29 Score=264.99 Aligned_cols=220 Identities=13% Similarity=0.165 Sum_probs=180.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++ +.++.+++||++|+++++++++++.++||+|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFGEV 79 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence 5899999999999999999999999997655544434445554444 5678899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||... ..++.+.+.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 80 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~II~isS~~~~~~~~~~~~Y~asKa 155 (243)
T d1q7ba_ 80 DILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK---KRHGRIITIGSVVGTMGNGGQANYAAAKA 155 (243)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred ceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHH---cCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence 99999999987 889999999999999999999999999999999764 24689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|....... .....+...+. ..+|+|....+..++..
T Consensus 156 al~~lt~~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 224 (243)
T d1q7ba_ 156 GLIGFSKSLAREVA--SRGITVNVVAPGFIE-TDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASD 224 (243)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhC--ccCeEEEEEecceEe-chhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999988865 456788899888664 4554332222 22222333332 45789999888887753
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.96 E-value=9.3e-29 Score=264.57 Aligned_cols=224 Identities=16% Similarity=0.152 Sum_probs=179.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++. .+.++.+++||++|+++++++++++.++||+|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999976555544445555666664 35689999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ....+.||++||+++..+.+++..|+++|+
T Consensus 84 DiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~--~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa 160 (251)
T d1zk4a1 84 STLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN--KGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp CEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--SSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred eEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHh--cCCCCceEeeeccceeccCCCchhHHHHHH
Confidence 99999999988 889999999999999999999999999999999742 233468999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhH--HHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF--YFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~--~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+...+..++++.+|.+|... +.|.......... ......+ +..+|+|...++..++.
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S 231 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBC-CHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCC-ChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999988764334566799999988764 4554322211111 1111122 23478999888877664
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.4e-28 Score=263.77 Aligned_cols=221 Identities=11% Similarity=0.089 Sum_probs=184.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.|.++.+++||++|+++++++++++.++||+|
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999987666555566778888999989999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++ +++.++|++++++|+.|+++++++++|+|++ .+.+.||++||+++..+.++++.|+++|+
T Consensus 90 DilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~g~Ii~isS~~~~~~~~~~~~Y~asKa 164 (255)
T d1fmca_ 90 DILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEK---NGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_dssp CEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcc---ccccccccccccchhccccccccchhHHH
Confidence 99999999877 5555 7899999999999999999999999999754 34678999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--chhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|.... ++..+...+...+. ..+|+|...++..++.
T Consensus 165 al~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S 233 (255)
T d1fmca_ 165 AASHLVRNMAFDLG--EKNIRVNGIAPGAIL-TDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_dssp HHHHHHHHHHHHHH--TTTEEEEEEEECSBC-SHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhC--ccCeEEEEeeeCcCc-ChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999998854 556789999988764 3332221 22222333333333 3478998888887664
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.96 E-value=5.7e-29 Score=266.14 Aligned_cols=232 Identities=14% Similarity=0.115 Sum_probs=183.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++ ++|+. +++.+..++.+.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~-~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVL-ADVLD--EEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCH--HHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEE-EECCH--HHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence 6899999999999999999999999997554 45543 23344455567889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~~~G~II~isS~~~~~~~~~~~~Y~asKa 156 (254)
T d1hdca_ 81 DGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD---AGGGSIVNISSAAGLMGLALTSSYGASKW 156 (254)
T ss_dssp CEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhh---cCCCeecccccchhcccccchhhHHHHHH
Confidence 99999999987 889999999999999999999999999999999764 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hhhHHHHhcCCCCC--CHHHHHHHHHHHHhccc----h
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSSKQKVL--HENDGLKLFEQLLIQDK----I 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~g~~~l--~~~~~~~~l~~~l~~~~----~ 299 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+..+ .|+|...++..++.... .
T Consensus 157 al~~lt~~lA~e~a--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG 233 (254)
T d1hdca_ 157 GVRGLSKLAAVELG--TDRIRVNSVHPGMTY-TPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233 (254)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhC--CCceEEEEeeeCccc-CccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence 99999999998854 456788899887664 444322111 11111222333333 58899888887764332 2
Q ss_pred hhhhhchhh
Q psy612 300 QYLVLSGEL 308 (1005)
Q Consensus 300 ~~~v~~~~~ 308 (1005)
+.+.+++.|
T Consensus 234 ~~i~vDGG~ 242 (254)
T d1hdca_ 234 AELAVDGGW 242 (254)
T ss_dssp CEEEESTTT
T ss_pred ceEEeCCCc
Confidence 344555554
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.96 E-value=2.7e-28 Score=261.75 Aligned_cols=221 Identities=13% Similarity=0.073 Sum_probs=182.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.|.++.+++||++|+++++++++++.++||+||+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 78999999999999999999999997666555556667888889988999999999999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ....+.||++||+++..+.++++.|+++|+++
T Consensus 82 lVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal 158 (255)
T d1gega_ 82 IVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKK--EGHGGKIINACSQAGHVGNPELAVYSSSKFAV 158 (255)
T ss_dssp EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred EEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhh--hccccccccccchhhcccCcccccchhCHHHH
Confidence 999999987 889999999999999999999999999999998753 34568899999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCcccccccch------------hhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
.+|++.++.+.. ..++++.+|.+|.. ++.|...... ......+...+. .-+|+|...++..++.
T Consensus 159 ~~ltk~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S 235 (255)
T d1gega_ 159 RGLTQTAARDLA--PLGITVNGYCPGIV-KTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS 235 (255)
T ss_dssp HHHHHHHHHHHG--GGTEEEEEEEECSB-SSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HhhHHHHHHHhh--hhCcEEEEEecCcc-cChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999998854 45578889988866 4444321110 111112222232 3478888888777664
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.96 E-value=1.5e-28 Score=262.90 Aligned_cols=223 Identities=18% Similarity=0.173 Sum_probs=181.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..++..+++. +.|.++.+++||++|+++++++++++.++||+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999976555544455566666664 45788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaa 224 (1005)
||+||||||+.. ..++.+++.++|++++++|+.|+++++|+++|+| .+++.+.||++||+.+. .+.+++..|+++
T Consensus 84 iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m---~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as 159 (251)
T d1vl8a_ 84 LDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL---RESDNPSIINIGSLTVEEVTMPNISAYAAS 159 (251)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc---cccccccccccccchhccccCccccchHHH
Confidence 999999999987 8899999999999999999999999999999995 44567899999998764 577899999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.+. +.|.... .+..+...+...+ +..+|+|..+++..++..
T Consensus 160 Kaal~~lt~~lA~e~~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 232 (251)
T d1vl8a_ 160 KGGVASLTKALAKEWG--RYGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE 232 (251)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-STTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred HHhHHHHHHHHHHHhc--ccCeEEEEEeeCccc-CHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999998865 456788899888764 4553321 1122223333333 245788888888776643
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.96 E-value=2.2e-28 Score=262.68 Aligned_cols=223 Identities=16% Similarity=0.113 Sum_probs=179.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..++..+++.+. +.++.+++||++|+++++++++++.++||
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999997665555555566666666543 56899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+..+..++.+++.++|++++++|+.|++++++++.|+|++ +..++||++||+++..+.++++.|+++
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~---~~~G~Ii~isS~~~~~~~~~~~~Y~as 159 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE---QGSGMVVNTASVGGIRGIGNQSGYAAA 159 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh---hcCCCCcccccHhhccCCCCchHHHHH
Confidence 99999999998754678999999999999999999999999999999754 356889999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc--------ch-hhhHHHHhcCC-CCCCHHHHHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--------NE-QTDFYFKSSKQ-KVLHENDGLKLFEQLL 294 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--------~~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l 294 (1005)
|+++.+|++.++.+.. ..++++.+|.+|... +.|.... .. ..+...+...+ +..+|+|...++..++
T Consensus 160 Kaal~~lt~~lA~el~--~~gIrVN~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~ 236 (258)
T d1iy8a_ 160 KHGVVGLTRNSAVEYG--RYGIRINAIAPGAIW-TPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL 236 (258)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhC--ccCceEEEEeeCccc-CHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999998865 456788899887664 4442211 00 11112222222 2347888887777665
Q ss_pred h
Q psy612 295 I 295 (1005)
Q Consensus 295 ~ 295 (1005)
.
T Consensus 237 S 237 (258)
T d1iy8a_ 237 S 237 (258)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.96 E-value=1.9e-28 Score=263.56 Aligned_cols=187 Identities=16% Similarity=0.208 Sum_probs=167.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.|.++.++.||++|+++++++++++.++||+|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 68999999999999999999999999976655544456677888898889999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.....++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~---~~~G~II~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT---QNYGRIVNTASMAGVKGPPNMAAYGTSKG 160 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhh---hcCCCCCeeechhhccCCcchHHHHHHHH
Confidence 999999998753578999999999999999999999999999999754 35689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
++.+|++.++.+.. ..++++.+|.+|....
T Consensus 161 al~~ltk~lA~el~--~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 161 AIIALTETAALDLA--PYNIRVNAISPGYMGP 190 (260)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHHHhh--hhCCEEEEeccCcccC
Confidence 99999999998865 4567889998887643
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=2.5e-28 Score=259.55 Aligned_cols=216 Identities=13% Similarity=0.120 Sum_probs=177.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++. ++.+.++.+++||++|+++++++++++.+++|+|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA---AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999999999999999999997555444333333333 3446678999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|++++++.+.|+|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 82 dilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 157 (244)
T d1nffa_ 82 HVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE---AGRGSIINISSIEGLAGTVACHGYTATKF 157 (244)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred eEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHh---cCcceEEeccccccccccccccchhhHHH
Confidence 99999999987 889999999999999999999999999999999754 34689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.....+.. .+..+ +..+|+|..+.+..++..
T Consensus 158 al~~ltk~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~----~~~pl~R~~~p~diA~~v~fL~s~ 221 (244)
T d1nffa_ 158 AVRGLTKSTALELG--PSGIRVNSIHPGLV-KTPMTDWVPEDI----FQTALGRAAEPVEVSNLVVYLASD 221 (244)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCB-CSGGGTTSCTTC----SCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhc--ccCEEEEEEeeCCc-cChhHhhhhHHH----HhccccCCCCHHHHHHHHHHHhCh
Confidence 99999999998865 45678889988766 455543222211 11222 346889998888877653
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.96 E-value=3.1e-28 Score=262.20 Aligned_cols=222 Identities=13% Similarity=0.083 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|+++++..++. +..+++.+++.+ .+.++.+++||++|+++++++++++.++||
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999655554443 234556666644 477899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++
T Consensus 83 ~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~---~~~G~Iv~isS~~~~~~~~~~~~Y~as 158 (260)
T d1x1ta1 83 RIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKK---QGFGRIINIASAHGLVASANKSAYVAA 158 (260)
T ss_dssp CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhh---cCCceEeecccccceeccCCcchhhhh
Confidence 9999999999988 789999999999999999999999999999999764 346899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-------------hhhHHHHhcCC-CCCCHHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-------------QTDFYFKSSKQ-KVLHENDGLKLF 290 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-------------~~~~~~~~~g~-~~l~~~~~~~~l 290 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.. ++.|...... ......+...+ +..+|+|..+.+
T Consensus 159 Kaal~~lt~~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v 235 (260)
T d1x1ta1 159 KHGVVGFTKVTALETA--GQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235 (260)
T ss_dssp HHHHHHHHHHHHHHHT--TTTEEEEEEEECCB-CC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred hhhHHHhHHHHHHHhc--hhCcEEEEEecCCC-CChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999999998854 55678899988765 4444321110 00111222223 245788888887
Q ss_pred HHHHh
Q psy612 291 EQLLI 295 (1005)
Q Consensus 291 ~~~l~ 295 (1005)
..++.
T Consensus 236 ~fL~S 240 (260)
T d1x1ta1 236 VFLAS 240 (260)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 77664
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.5e-28 Score=261.27 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=185.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.||++|||||++|||+++|+.|+++|++++++.++.+.++++.++++..+.+++++.||++|+++++++++.+.+++|++
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999976665555566788888899889999999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ...+.+.+.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|+++|+
T Consensus 86 dilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 161 (244)
T d1yb1a_ 86 SILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK---NNHGHIVTVASAAGHVSVPFLLAYCSSKF 161 (244)
T ss_dssp SEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred ceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHh---cCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence 99999999988 778899999999999999999999999999999754 45789999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccc-CCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 227 FQTVYAKYLNNKNIYKK-YTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~-~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
++.+|++.++.+....+ .++++.+|.+|. -+++|..... .. ....+++++.++.+...+..+.
T Consensus 162 al~~~~~~La~El~~~~~~gI~V~~i~PG~-v~T~~~~~~~-------~~-~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 162 AAVGFHKTLTDELAALQITGVKTTCLCPNF-VNTGFIKNPS-------TS-LGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEETH-HHHCSTTCTH-------HH-HCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEEcCC-CCChhhhCcC-------cc-ccCCCCHHHHHHHHHHHHhcCC
Confidence 99999999988743212 346888998874 4666653221 11 1245788999888777776554
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.96 E-value=8.1e-28 Score=258.42 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=184.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-C
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG-P 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g-~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.+.++.+++||++|+++++++++++.++++ +
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 699999999999999999999999999766655544667788888988899999999999999999999999999987 8
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ...++||++||+++..+.++++.|+++|
T Consensus 87 idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 87 LNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA---SERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred ceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhh---hcccccccccccccccccccccchHHHH
Confidence 999999999987 788999999999999999999999999999999653 4578999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc------hhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+. .-+|+|..+++..++.
T Consensus 163 aal~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S 236 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWA--KDNIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF 236 (259)
T ss_dssp HHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-SHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhC--cCceEEEEeeeCccc-CHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999998854 456788899888764 44421110 1111222333332 4568888888777664
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.95 E-value=2.7e-28 Score=261.14 Aligned_cols=219 Identities=12% Similarity=0.117 Sum_probs=176.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++ +.|+ +..+++.++ .+.+..+++||++|+++++++++++.++||+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDINEAAGQQLAAE---LGERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHH---HCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHH---hCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999997555 4554 333444443 4678899999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+ + ..++||++||+++..+.++++.|+++|
T Consensus 81 iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~---~-~~G~Iv~isS~~~~~~~~~~~~Y~asK 155 (253)
T d1hxha_ 81 LNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK---E-TGGSIINMASVSSWLPIEQYAGYSASK 155 (253)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT---T-TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH---h-cCCceecccchhhhcCccccccccchh
Confidence 999999999987 78899999999999999999999999999999964 2 358999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-c-hhhhHHH-HhcCC----CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYF-KSSKQ----KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~-~~~g~----~~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+..+++.++++.+|.+|... +.|.... . ....... +...+ +..+|+|....+..++.
T Consensus 156 aal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S 231 (253)
T d1hxha_ 156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIY-TPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESEEC-CHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEeECCCc-CHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhC
Confidence 99999999998876555567899999988765 4442111 0 1111111 11111 24578999988887765
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.5e-27 Score=255.97 Aligned_cols=228 Identities=12% Similarity=0.070 Sum_probs=184.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+++++.+ .++.+++||++++++++++++++.++||
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999976555544456678888888765 5889999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--CCCChhhh
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFGSCDYA 222 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g--~~g~~~Ya 222 (1005)
+||++|||||... ..++.+++.++|++++++|+.|++++.+.++|.|++. ....++||++||+++..+ .++...|+
T Consensus 89 ~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~-~~~~g~Ii~isS~~~~~~~p~~~~~~Y~ 166 (257)
T d1xg5a_ 89 GVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVLPLSVTHFYS 166 (257)
T ss_dssp CCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred CCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHh-ccCCCceEEEechHhcCCCCCcccHHHH
Confidence 9999999999987 7899999999999999999999999999999997642 234689999999998754 56678899
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hhhHHHHh-cCCCCCCHHHHHHHHHHHHhcc
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKS-SKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~-~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
++|+++.+|+++++.+....+.++++.+|.+|.... .|.....+ ..+..... ...+..+|+|..+++..++..+
T Consensus 167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t-~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~ 242 (257)
T d1xg5a_ 167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS-SHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCC-hhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCCh
Confidence 999999999999988754446778999999887753 33222111 11122222 2334678999999998887655
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.95 E-value=1.2e-27 Score=256.62 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=175.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+..+++.+ +.+.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~---~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 80 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA---EIGPAACAIALDVTDQASIDRCVAELLDRWGSI 80 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999875555433333344433 447889999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.|++++.++++|.|.+ ....++||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 157 (256)
T d1k2wa_ 81 DILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIA--GGRGGKIINMASQAGRRGEALVGVYCATKA 157 (256)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHH--hccCCccccccchhhccccccccchhhhhh
Confidence 99999999987 789999999999999999999999999999998643 345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhhhHHHHhcCCC-CCCHHHHHHHHHHH
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQK-VLHENDGLKLFEQL 293 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~~-~l~~~~~~~~l~~~ 293 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.... ........+...+. ..+|+|...++..+
T Consensus 158 al~~lt~~lA~el~--~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL 234 (256)
T d1k2wa_ 158 AVISLTQSAGLNLI--RHGINVNAIAPGVV-DGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFL 234 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCB-CCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEecCCC-CchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999998865 45578889988755 34442111 11111222233332 44788887777665
Q ss_pred Hh
Q psy612 294 LI 295 (1005)
Q Consensus 294 l~ 295 (1005)
+.
T Consensus 235 ~S 236 (256)
T d1k2wa_ 235 AT 236 (256)
T ss_dssp TS
T ss_pred hC
Confidence 43
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=2.2e-27 Score=253.11 Aligned_cols=217 Identities=11% Similarity=0.108 Sum_probs=173.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
-++|++|||||++|||+++|+.|+++|+++++ +.|++...+..+++ + ..+++||++|+++++++++++.++||+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~-~~~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 76 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVAL-CDLRPEGKEVAEAI---G--GAFFQVDLEDERERVRFVEEAAYALGR 76 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESSTTHHHHHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence 37999999999999999999999999996554 55554444443333 3 356899999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|+ +++.++||++||+++..+.++++.|+++|
T Consensus 77 iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~---~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 152 (248)
T d2d1ya1 77 VDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR---KVGGGAIVNVASVQGLFAEQENAAYNASK 152 (248)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH---TTTCEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred CCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc---ccccccccccccccccccccccchhHHHH
Confidence 999999999988 78999999999999999999999999999999964 34578999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-------cchhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|.... .|... .+.......+...+. .-+|+|....+..++.
T Consensus 153 aal~~ltk~lA~el~--~~gIrVN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S 227 (248)
T d2d1ya1 153 GGLVNLTRSLALDLA--PLRIRVNAVAPGAIAT-EAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 227 (248)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-HHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeeCCCCC-chHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999988865 4567888998887643 33211 111112222222332 3478888888777664
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=7.6e-28 Score=258.53 Aligned_cols=222 Identities=12% Similarity=0.051 Sum_probs=162.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++++.+.++.++.||++++++++++++++.++| |+
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 69999999999999999999999999976655544456778888888888899999999999999999999999998 78
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.+++..|+++|
T Consensus 87 idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~---~~~G~Iv~isS~~~~~~~~~~~~Y~asK 162 (259)
T d1xq1a_ 87 LDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA---SGCGNIIFMSSIAGVVSASVGSIYSATK 162 (259)
T ss_dssp CSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HSSCEEEEEC----------CCHHHHHH
T ss_pred cccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc---cccccccccccccccccccccccccccc
Confidence 999999999988 789999999999999999999999999999999764 3568999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--hhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|.. ++.|..... ...+...+...+. ..+|+|...++..++.
T Consensus 163 aal~~lt~~lA~e~~--~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S 232 (259)
T d1xq1a_ 163 GALNQLARNLACEWA--SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 232 (259)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEECCSC-C-------------------------CCGGGGHHHHHHHTS
T ss_pred cchhhhhHHHHHHhc--ccCeEEEEeccCcc-cCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999998865 45678889988866 445543211 1111112222222 3478888888777654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.2e-27 Score=251.97 Aligned_cols=218 Identities=17% Similarity=0.106 Sum_probs=174.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++ .|++ +..+++.+....+.++.||++|+++++++++++.++||+|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~-~r~~---~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC-DKDE---SGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL 80 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ESCH---HHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCH---HHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 69999999999999999999999999975554 5543 2333444444568899999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.....++.+++.++|++++++|+.|+++++++++|+|++ ..+.||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~----~~G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK----SQGNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh----CCCCCcccccccccccccCcchhHHHHh
Confidence 999999998653567889999999999999999999999999999864 2378999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc----cc---hhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~---~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|... .. ...........+ +..+|+|..+++..++.
T Consensus 157 al~~lt~~lA~e~a--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S 230 (250)
T d1ydea1 157 AVTAMTKALALDES--PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS 230 (250)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSB-CCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc--ccCeEEEEEeeCCC-CChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 99999999998865 45678888988766 4444221 11 111122222223 24578898888877664
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=6.7e-27 Score=248.52 Aligned_cols=216 Identities=15% Similarity=0.157 Sum_probs=171.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++ +|++ ..++.. ++. .+.+++||++|+++++++++++.++||+
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~-~r~~~~l~~~~---~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVAC-DIEEGPLREAA---EAV--GAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHH---HTT--TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHH---HHc--CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999975554 5543 333322 233 3567899999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+++.++|++++++|+.|+++++++++|+| .+...+.++++|| ++..+.++++.|+++|
T Consensus 78 iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m---~~~~~~~i~~~ss-~~~~~~~~~~~Y~asK 152 (242)
T d1ulsa_ 78 LDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAM---REKNPGSIVLTAS-RVYLGNLGQANYAASM 152 (242)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTCCEEEEEECC-GGGGCCTTCHHHHHHH
T ss_pred ceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccc---cccccceeeeecc-ccccCCCCCcchHHHH
Confidence 999999999987 7899999999999999999999999999999995 4445566666666 5678999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
+++.+|++.++.+.. ..++++.+|.+|.. ++.|.....+. .....+...+. ..+|+|...++..++..
T Consensus 153 aal~~ltk~lA~ela--~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~ 222 (242)
T d1ulsa_ 153 AGVVGLTRTLALELG--RWGIRVNTLAPGFI-ETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSD 222 (242)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEeeCcc-cChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhch
Confidence 999999999988865 45578889988776 45565443332 22223333333 34788988888777653
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=3.5e-27 Score=249.81 Aligned_cols=212 Identities=15% Similarity=0.183 Sum_probs=165.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+. ..++..++||++|+++++++++++.++||+|
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 74 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-----------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPV 74 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-----------hcCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 68999999999999999999999999976665554432 2346789999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+.+.++|++++++|+.|++++.+.++|+|++ .+.++||++||+++..+.+++..|+++|+
T Consensus 75 DiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 75 EVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR---NKFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp SEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred eEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc---cCCCceEEEcchhhccCCcccHHHHHHHH
Confidence 99999999987 889999999999999999999999999999999653 45689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.....+.. +...+...+ +..+|+|...++..++..
T Consensus 151 al~~lt~~lA~e~~--~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 219 (237)
T d1uzma1 151 GVIGMARSIARELS--KANVTANVVAPGYI-DTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASE 219 (237)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHhhhh--cCCceeeeeeeCcC-CChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999988855 45678888987766 455644322222 122233333 245788888888776643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.95 E-value=1.4e-26 Score=250.26 Aligned_cols=237 Identities=15% Similarity=0.173 Sum_probs=184.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++... ..+.+++||++|+++++++++++.++||+|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 6899999999999999999999999997666655445566667777544 458889999999999999999999999999
Q ss_pred cEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh-hhhHH
Q psy612 147 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~-~Yaaa 224 (1005)
|++|||||+... +..+.+++.++|++++++|+.|+++++++++|+|+ +++.+.+|++||+++..+.++.. .|+++
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~---~~~~g~ii~iss~~~~~~~~~~~~~Y~as 160 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI---PAKKGSIVFTASISSFTAGEGVSHVYTAT 160 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG---GGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHh---hcCCCCccccccccccccccccccccchh
Confidence 999999998652 23578999999999999999999999999999964 34578999999999999877754 89999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc----hhhhHHHHh--cC-CCCCCHHHHHHHHHHHHhcc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFYFKS--SK-QKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~~~~--~g-~~~l~~~~~~~~l~~~l~~~ 297 (1005)
|+++.+|++.++.+.. ..++++.+|.+|.. ++.|..... ......... .. -+..+|+|...++..++...
T Consensus 161 Kaal~~lt~~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~ 237 (268)
T d2bgka1 161 KHAVLGLTTSLCTELG--EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 237 (268)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEESCC-SCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHhCHHHHHHHhC--hhCeEEEecCCCCc-cChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChh
Confidence 9999999999988854 45678889988765 445543221 111111111 11 13568999999888877533
Q ss_pred c----hhhhhhchhhHH
Q psy612 298 K----IQYLVLSGELEK 310 (1005)
Q Consensus 298 ~----~~~~v~~~~~~~ 310 (1005)
. .+.+.++|.|..
T Consensus 238 s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 238 SKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred hCCccCceEEECcCccc
Confidence 2 245566776643
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.94 E-value=2.7e-26 Score=246.88 Aligned_cols=223 Identities=18% Similarity=0.174 Sum_probs=181.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+++. +.|.++.+++||++|+++++++++++.++||+
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999976666666666677766664 45889999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-------CCCCC
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-------GDFGS 218 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-------g~~g~ 218 (1005)
||++|||||+.. ..++.+++.++|++++++|+.|++++.+++.|+|. ++...+.|+++||..... +.+++
T Consensus 88 iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~--~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~ 164 (260)
T d1h5qa_ 88 ISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWL--QKQQKGSIVVTSSMSSQIINQSSLNGSLTQ 164 (260)
T ss_dssp EEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred CcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhccccc--ccccceEEEEeeccccccccccccccCccc
Confidence 999999999987 88999999999999999999999999999999984 344677888888876654 34688
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhh-hHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|........ +...+...+ +..+|+|...++..++.
T Consensus 165 ~~Y~asKaal~~lt~~lA~el~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S 240 (260)
T d1h5qa_ 165 VFYNSSKAACSNLVKGLAAEWA--SAGIRVNALSPGYVN-TDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 240 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred cchhhhhhhHHHHHHHHHHHhc--hhCeEEeecCCCccc-CcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence 9999999999999999988754 455788899888764 45544333222 222333333 24578888888877664
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.94 E-value=2.9e-26 Score=247.23 Aligned_cols=224 Identities=12% Similarity=0.058 Sum_probs=168.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..+++.+++++.+ .++.+++||++|+++++++++++.++|
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999976555544456677888887764 369999999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCc-ccccCCCCCh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS-SAILGDFGSC 219 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSi-a~~~g~~g~~ 219 (1005)
|+||++|||||+..+ ..++.+.+.++|++++++|+.|+++++++++|+|++. .+.+|+++|+ ++..+.+++.
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~----~g~iI~~~S~~~~~~~~~~~~ 159 (264)
T d1spxa_ 84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST----KGEIVNISSIASGLHATPDFP 159 (264)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCTTSSSSCCTTSH
T ss_pred CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc----cCcceeeeeeccccccCCCch
Confidence 999999999998641 3456778999999999999999999999999998642 2456666665 4678999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch----------hhhHHHHhcCCC-CCCHHHHHH
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----------QTDFYFKSSKQK-VLHENDGLK 288 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----------~~~~~~~~~g~~-~l~~~~~~~ 288 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+. ..+|+|..+
T Consensus 160 ~Y~asKaal~~lt~~lA~el~--~~gIrVN~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~ 236 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLI--QHGIRVNSISPGLVA-TGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 236 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-CCC--------------HHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 999999999999999998865 455788899888764 444321110 011112223332 457888888
Q ss_pred HHHHHHhcc
Q psy612 289 LFEQLLIQD 297 (1005)
Q Consensus 289 ~l~~~l~~~ 297 (1005)
++..++..+
T Consensus 237 ~v~fL~S~~ 245 (264)
T d1spxa_ 237 VIAFLADRK 245 (264)
T ss_dssp HHHHHHCHH
T ss_pred HHHHHhCCc
Confidence 888776533
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.2e-26 Score=243.64 Aligned_cols=214 Identities=12% Similarity=0.077 Sum_probs=168.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+||++|||||++|||+++|+.|+++|+++++ ++|+ +..+++.++ ...+.++.+|++|++++++++ +++|+
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~-~~r~~~~l~~~~~~----~~~~~~~~~Dv~d~~~v~~~~----~~~g~ 76 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVA-VSRTQADLDSLVRE----CPGIEPVCVDLGDWEATERAL----GSVGP 76 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHH----STTCEEEECCTTCHHHHHHHH----TTCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHh----cCCCeEEEEeCCCHHHHHHHH----HHhCC
Confidence 7899999999999999999999999997555 4554 333333332 235788999999999887665 56899
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|. ++...+.||++||+++..+.+++..|+++|
T Consensus 77 iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~--~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK 153 (244)
T d1pr9a_ 77 VDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI--ARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred ceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHH--HhCCcceEeecccccccccccchhhhhhhH
Confidence 999999999988 88999999999999999999999999999999763 334568999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcCCC-CCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|..... .......+...+. ..+|+|..+.+..++.
T Consensus 154 aal~~lt~~lA~el~--~~gIrvN~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S 224 (244)
T d1pr9a_ 154 GALDMLTKVMALELG--PHKIRVNAVNPTVVM-TSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS 224 (244)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-SHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhC--CCcEEEEEEeeCcCc-ChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999988754 456788899887664 44532211 1122222333332 4578998888877664
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.94 E-value=5.7e-26 Score=243.61 Aligned_cols=222 Identities=12% Similarity=0.079 Sum_probs=181.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~-g~ 145 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+.+++..++++..+..++++.||++++++++++++++.+++ |+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 79999999999999999999999999965555544456677888898889999999999999999999999999998 68
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
+|+||||||... ..++.+++.++|++++++|+.+++++.+++.|.|++ ...+.||++||+++..+.+++..|+++|
T Consensus 85 idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~~~g~ii~isS~~~~~~~~~~~~Y~~sK 160 (258)
T d1ae1a_ 85 LNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA---SQNGNVIFLSSIAGFSALPSVSLYSASK 160 (258)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cEEEeccccccc-cCccccCCHHHHhhhhhhcccccccccccccccccc---ccccccccccccccccccccchhHHHHH
Confidence 999999999988 789999999999999999999999999999999754 4678999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-------chhhhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
+++.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+ +..+++|....+..++.
T Consensus 161 ~al~~lt~~lA~el~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S 235 (258)
T d1ae1a_ 161 GAINQMTKSLACEWA--KDNIRVNSVAPGVIL-TPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF 235 (258)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC--------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcC--cCcEEEEEEeeCccc-CcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999988854 455688888887664 3332211 1111222233333 24578888888877764
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=2.6e-26 Score=243.96 Aligned_cols=216 Identities=14% Similarity=0.056 Sum_probs=169.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+||++|||||++|||+++|+.|+++|++++++.++.+..+++.+ ....+.++.||++|++++++++ +++|+|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~----~~~~~~~~~~Dv~~~~~v~~~~----~~~g~i 75 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK----ECPGIEPVCVDLGDWDATEKAL----GGIGPV 75 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HSTTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----hcCCCeEEEEeCCCHHHHHHHH----HHcCCC
Confidence 68999999999999999999999999976655443333333332 2335778999999999887655 568999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|+||||||+.. ..++.+++.++|++++++|+.|++++.+.+.|.|. .+...+.||++||+++..+.++++.|+++|+
T Consensus 76 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~--~~~~~g~ii~isS~~~~~~~~~~~~Y~asKa 152 (242)
T d1cyda_ 76 DLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI--NRGVPGSIVNVSSMVAHVTFPNLITYSSTKG 152 (242)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred eEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhh--hhcccCcccccchhhccccCCccccccchHH
Confidence 99999999987 88999999999999999999999999999999864 3345689999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+ +..+|+|....+..++..
T Consensus 153 al~~lt~~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~ 223 (242)
T d1cyda_ 153 AMTMLTKAMAMELG--PHKIRVNSVNPTVVL-TDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD 223 (242)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBT-THHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhC--ccCeecccCCCCCcc-CHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999998855 455788899888664 4453221 1122223333333 345788888888776643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.94 E-value=3.5e-26 Score=247.58 Aligned_cols=222 Identities=13% Similarity=0.085 Sum_probs=173.9
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+.++++.+++++.+ .++.+++||++|+++++++++++.++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999976665555566677888887764 479999999999999999999999999
Q ss_pred CCccEEEEcCcccCccch----hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 144 GPIDGVLHIAGISGLTSN----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~----~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
|+||++|||||+.. ... ..+.+.++|++++++|+.|+++++++++|+|++ ...+.|++.||.++..+.++++
T Consensus 84 g~iDilvnnAG~~~-~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~---~~g~iI~~~Ss~a~~~~~~~~~ 159 (272)
T d1xkqa_ 84 GKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA---SKGEIVNVSSIVAGPQAQPDFL 159 (272)
T ss_dssp SCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEECCGGGSSSCCCSSH
T ss_pred CCceEEEeCCcccC-cccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccc---cCCccccccchhccccCCCCcc
Confidence 99999999999876 333 357788999999999999999999999999864 2334455555567889999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc--h-hh---hHHHH----hcCC-CCCCHHHHHH
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--E-QT---DFYFK----SSKQ-KVLHENDGLK 288 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~-~~---~~~~~----~~g~-~~l~~~~~~~ 288 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... + .. ..... ...+ +.-+|+|...
T Consensus 160 ~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~ 236 (272)
T d1xkqa_ 160 YYAIAKAALDQYTRSTAIDLA--KFGIRVNSVSPGMVE-TGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIAN 236 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCCCc-chhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 999999999999999998865 556799999988664 44432111 0 00 00111 1112 2347899888
Q ss_pred HHHHHHh
Q psy612 289 LFEQLLI 295 (1005)
Q Consensus 289 ~l~~~l~ 295 (1005)
++..++.
T Consensus 237 ~v~fL~S 243 (272)
T d1xkqa_ 237 IILFLAD 243 (272)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 8877764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.94 E-value=6.9e-26 Score=245.38 Aligned_cols=224 Identities=13% Similarity=0.087 Sum_probs=178.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
++|++|||||++|||+++|+.|+++|+++++..++.+.++++.+++++.+ .++.+++||++|+++++++++++.++|
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 58999999999999999999999999976665544456677888887764 468999999999999999999999999
Q ss_pred CCccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 144 GPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 144 g~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
|+||++|||||.... ...+.+.+.++|++++++|+.|++++++++.|+|++ .+.+.|+++||+++..+.++++.|+
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~g~ii~~ss~~~~~~~~~~~~Y~ 159 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK---TKGEIVNVSSIVAGPQAHSGYPYYA 159 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---TTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccc---cccccccchhhhhccccCCCCceeh
Confidence 999999999997542 345667899999999999999999999999999753 4568899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc------hhhhHHHH----hcCC-CCCCHHHHHHHHH
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFK----SSKQ-KVLHENDGLKLFE 291 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~----~~g~-~~l~~~~~~~~l~ 291 (1005)
++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+ ...+ +.-+|+|...++.
T Consensus 160 asKaal~~ltk~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~ 236 (274)
T d1xhla_ 160 CAKAALDQYTRCTAIDLI--QHGVRVNSVSPGAVA-TGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 236 (274)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHh--HhCCceeeeccCCCc-CchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHH
Confidence 999999999999988865 455788899887664 44422110 01111111 1122 2347899988888
Q ss_pred HHHhc
Q psy612 292 QLLIQ 296 (1005)
Q Consensus 292 ~~l~~ 296 (1005)
.++..
T Consensus 237 fL~S~ 241 (274)
T d1xhla_ 237 FLADR 241 (274)
T ss_dssp HHHCH
T ss_pred HHcCC
Confidence 77653
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.94 E-value=1e-25 Score=241.13 Aligned_cols=220 Identities=11% Similarity=0.058 Sum_probs=174.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC-CCcEEEEEecCC-CHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVS-DKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~-g~~v~~~~~Dvt-d~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+..++..+..... +.++.++.+|++ +.++++++++.+.+++|
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999998888776654443333333 468999999998 67789999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||... .+.|++++++|+.|+++++++++|+|++.+..+.++||++||+++..+.+++..|+++
T Consensus 84 ~iDilvnnAG~~~---------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as 154 (254)
T d1sbya1 84 TVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSAS 154 (254)
T ss_dssp CCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHH
T ss_pred CCCEEEeCCCCCC---------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHH
Confidence 9999999999643 4679999999999999999999999876555567999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhH-HHHhcCCCCCCHHHHHHHHHHHHhccc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDF-YFKSSKQKVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~-~~~~~g~~~l~~~~~~~~l~~~l~~~~ 298 (1005)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... ..... .....+....+++++.+.+..++....
T Consensus 155 Kaal~~~t~~la~el~--~~gIrVn~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~ 229 (254)
T d1sbya1 155 KAAVVSFTNSLAKLAP--ITGVTAYSINPGITR-TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK 229 (254)
T ss_dssp HHHHHHHHHHHHHHHH--HHSEEEEEEEECSEE-SHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhcc--ccCeEEEEEEeCCCc-CccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCC
Confidence 9999999999988743 445799999988664 44432111 11111 111233345678888887777765543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.6e-26 Score=242.37 Aligned_cols=219 Identities=17% Similarity=0.181 Sum_probs=172.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.||++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+. +.++.+++||++|+++++++++++.++||
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999997666555555666777777654 56899999999999999999999999999
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||+.. . ++|++++++|+.++++++++++|+|++......++||++||+++..+.++++.|+++
T Consensus 82 ~iDilVnnAg~~~-~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 152 (254)
T d2gdza1 82 RLDILVNNAGVNN-E--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS 152 (254)
T ss_dssp CCCEEEECCCCCC-S--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CcCeecccccccc-c--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence 9999999999865 2 358899999999999999999999876555556899999999999999999999999
Q ss_pred HHHHHHHHHH--HHhccccccCCceEEEEeCCcccCcccccccch---------hhhHHHHhcCC-CCCCHHHHHHHHHH
Q psy612 225 NRFQTVYAKY--LNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---------QTDFYFKSSKQ-KVLHENDGLKLFEQ 292 (1005)
Q Consensus 225 na~l~~la~~--~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---------~~~~~~~~~g~-~~l~~~~~~~~l~~ 292 (1005)
|+++.+|++. ++.+.. ..++++.+|.+|... +.|...... ..+...+...+ +..+|+|.++.+..
T Consensus 153 Kaal~~ltrs~ala~e~~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 229 (254)
T d2gdza1 153 KHGIVGFTRSAALAANLM--NSGVRLNAICPGFVN-TAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCCEEEEEEEESCBS-SHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc--CCCEEEEEEEcCCCC-ChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999986 444432 455699999988764 444322111 00111111111 34678898888888
Q ss_pred HHhcc
Q psy612 293 LLIQD 297 (1005)
Q Consensus 293 ~l~~~ 297 (1005)
++..+
T Consensus 230 L~s~~ 234 (254)
T d2gdza1 230 LIEDD 234 (254)
T ss_dssp HHHCT
T ss_pred HHcCC
Confidence 77643
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.2e-26 Score=248.39 Aligned_cols=225 Identities=16% Similarity=0.106 Sum_probs=174.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEE--ecCCC-chHH---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLIL--SGRSK-LNSI---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil--~~r~~-~~~~---~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.|++|||||++|||+++|+.|+++|++++++ ..|+. ..++ ..+++...+.++.++.||++|+++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 5789999999999999999999999985443 34442 2223 3334444578999999999999999999998744
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
|.+|+||||||... ...+.+.+.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.++++.|
T Consensus 82 --g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~---~~~G~Iv~isS~~g~~~~~~~~~Y 155 (285)
T d1jtva_ 82 --GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR---RGSGRVLVTGSVGGLMGLPFNDVY 155 (285)
T ss_dssp --SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEEEEGGGTSCCTTCHHH
T ss_pred --cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHH---cCCCceEEEechhhcCCCCCchHH
Confidence 89999999999988 888999999999999999999999999999999864 346899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhh------------HH------HHh-cCCCCCC
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD------------FY------FKS-SKQKVLH 282 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~------------~~------~~~-~g~~~l~ 282 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|......... .. .+. ......+
T Consensus 156 ~asKaal~~l~~~la~El~--~~gIrVn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T d1jtva_ 156 CASKFALEGLCESLAVLLL--PFGVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN 232 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-C-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred HHHHHHHHHHHHHHHHHhh--ccCcEEEEEecCCCC-ChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCC
Confidence 9999999999999998854 456788899887664 555432111000 00 000 0112568
Q ss_pred HHHHHHHHHHHHhccchhh
Q psy612 283 ENDGLKLFEQLLIQDKIQY 301 (1005)
Q Consensus 283 ~~~~~~~l~~~l~~~~~~~ 301 (1005)
|+|.++.+..++..+.|..
T Consensus 233 PeeVA~~v~~~~~~~~p~~ 251 (285)
T d1jtva_ 233 PEEVAEVFLTALRAPKPTL 251 (285)
T ss_dssp HHHHHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHhCCCCCe
Confidence 9999999999988776543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=4.1e-26 Score=250.06 Aligned_cols=211 Identities=16% Similarity=0.130 Sum_probs=171.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC---------CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 137 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~---------~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 137 (1005)
++|++|||||++|||+++|+.|+++|+++++..... ...++..+++...+ ..+.+|++|.++++++++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~v~ 82 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEKLVK 82 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHHHHH
Confidence 689999999999999999999999999766653221 12344555555544 456789999999999999
Q ss_pred HHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy612 138 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 217 (1005)
Q Consensus 138 ~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g 217 (1005)
++.++||+||+||||||+.. ..++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..|.++
T Consensus 83 ~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~---~~~G~IV~isS~~~~~~~~~ 158 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKK---QNYGRIIMTASASGIYGNFG 158 (302)
T ss_dssp HHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHh---CCCcEEEEeCChhhcCCCCC
Confidence 99999999999999999998 889999999999999999999999999999999864 34689999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHh
Q psy612 218 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 218 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~ 295 (1005)
++.|+++|+++.+|++.++.+.. ..++++.+|.+|.. .+.|.....+. +. +.+.|+|....+..+..
T Consensus 159 ~~~Y~asKaal~~lt~~la~E~~--~~gIrVN~I~PG~~-~t~~~~~~~~~----~~----~~~~PedvA~~v~fL~S 225 (302)
T d1gz6a_ 159 QANYSAAKLGLLGLANTLVIEGR--KNNIHCNTIAPNAG-SRMTETVMPED----LV----EALKPEYVAPLVLWLCH 225 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEEECC-STTTGGGSCHH----HH----HHSCGGGTHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh--ccCCceeeeCCCCC-CcchhhcCcHh----hH----hcCCHHHHHHHHHHHcC
Confidence 99999999999999999999865 45668888887654 33332221111 11 23678888888877653
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.4e-25 Score=243.42 Aligned_cols=237 Identities=15% Similarity=0.092 Sum_probs=184.9
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHH
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSI 139 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-----~g~~v~~~~~Dvtd~~~v~~~~~~i 139 (1005)
.-++|++|||||++|||+++|+.|+++|+++++..++.+..++..++|++ .+.++.+++||++|+++++++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 34799999999999999999999999999766555554566777777764 3678999999999999999999999
Q ss_pred HhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 140 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 140 ~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
.+++|+||++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ ...+.||++|| ++..+.+++.
T Consensus 89 ~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~---~~~g~Ii~~ss-~~~~~~~~~~ 163 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK---EHGGSIVNIIV-PTKAGFPLAV 163 (297)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH---HHCEEEEEECC-CCTTCCTTCH
T ss_pred HHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcc---ccccccccccc-cccccccccc
Confidence 999999999999999987 889999999999999999999999999999999754 34566887755 5667889999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----hhhhHHHHhcCC-CCCCHHHHHHHHHHH
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----EQTDFYFKSSKQ-KVLHENDGLKLFEQL 293 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~~~~~~~~~~g~-~~l~~~~~~~~l~~~ 293 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... ...+...+...+ +..+|+|...++..+
T Consensus 164 ~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL 240 (297)
T d1yxma1 164 HSGAARAGVYNLTKSLALEWA--CSGIRINCVAPGVIY-SQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL 240 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-CTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhc--ccCceEEEeeeCcCc-CcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999998865 456788888888764 33332211 111122222222 244788888888777
Q ss_pred Hhccc----hhhhhhchhhH
Q psy612 294 LIQDK----IQYLVLSGELE 309 (1005)
Q Consensus 294 l~~~~----~~~~v~~~~~~ 309 (1005)
+.... .+.+.++|.+.
T Consensus 241 ~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 241 LSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hCchhcCcCCcEEEeCcChh
Confidence 65332 24455666553
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.93 E-value=1.7e-25 Score=240.42 Aligned_cols=220 Identities=15% Similarity=0.085 Sum_probs=177.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.||++|||||++|||+++|+.|+++|+++++..+|+.. .+++.+++++.|.++++++||++|+++++++++++.+++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999998877777754 56778888889999999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~g~~~Yaaa 224 (1005)
||++|||||... ..++.+.+.++|++++++|+.+++++.+.++|+|+ + .+.+++++|.++.. |.+++..|+++
T Consensus 85 idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~--~g~~iii~s~~~~~~~~~~~~~Y~as 158 (259)
T d1ja9a_ 85 LDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR---R--GGRIILTSSIAAVMTGIPNHALYAGS 158 (259)
T ss_dssp EEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE---E--EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred CcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhh---c--CCcccccccccccccCCCCchhHHHH
Confidence 999999999987 88899999999999999999999999999999863 2 34566676665544 78999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc--------------cchhhhHHHHhcCC-CCCCHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG--------------NNEQTDFYFKSSKQ-KVLHENDGLKL 289 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~--------------~~~~~~~~~~~~g~-~~l~~~~~~~~ 289 (1005)
|+++.+|++.++.+.. ..++++.+|.+|... +.|... .+...+...+...+ +..+|+|..++
T Consensus 159 K~al~~l~r~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~ 235 (259)
T d1ja9a_ 159 KAAVEGFCRAFAVDCG--AKGVTVNCIAPGGVK-TDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 235 (259)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBS-SHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEeccCcCCcc-ChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 9999999999998854 456688888887664 333110 01111222233333 34567888877
Q ss_pred HHHHHh
Q psy612 290 FEQLLI 295 (1005)
Q Consensus 290 l~~~l~ 295 (1005)
+..++.
T Consensus 236 v~fL~S 241 (259)
T d1ja9a_ 236 VSALCQ 241 (259)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 776554
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.93 E-value=3.1e-25 Score=240.49 Aligned_cols=231 Identities=16% Similarity=0.102 Sum_probs=173.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|++++++.++.+.+++ ..++.+.++.++.+|++++++++++++++.++||+|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~---~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 80 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE---LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI 80 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999965555433333333 333456789999999999999999999999999999
Q ss_pred cEEEEcCcccCccc----hhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhh
Q psy612 147 DGVLHIAGISGLTS----NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 222 (1005)
Q Consensus 147 dgvIh~AG~~~~~~----~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Ya 222 (1005)
|++|||||+..... ...+.+.++|++++++|+.|+++++++++|+|++. .+.+|+++|+++..+.++++.|+
T Consensus 81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~----~g~iI~i~S~~~~~~~~~~~~Y~ 156 (276)
T d1bdba_ 81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS----RGNVIFTISNAGFYPNGGGPLYT 156 (276)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGTSTTSSCHHHH
T ss_pred ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc----CCCceeeeechhccCCCCCchHH
Confidence 99999999865222 23445567899999999999999999999998642 37899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-----------hhhhHHHHhcCCC-CCCHHHHHHHH
Q psy612 223 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQTDFYFKSSKQK-VLHENDGLKLF 290 (1005)
Q Consensus 223 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~~~~~~~~g~~-~l~~~~~~~~l 290 (1005)
++|+++.+|++.++.+.. . .+++.+|.+|... +.|..... ...+...+...+. .-+|+|...++
T Consensus 157 asKaal~~ltr~lA~ela--~-~IrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v 232 (276)
T d1bdba_ 157 AAKHAIVGLVRELAFELA--P-YVRVNGVGSGGIN-SDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY 232 (276)
T ss_dssp HHHHHHHHHHHHHHHHHT--T-TCEEEEEEECCCC-SCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHhh--c-ceEEcccCCCCEe-cCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999999999998853 2 3789999888763 44432111 0111111222222 23688888777
Q ss_pred HHHHhccc-----hhhhhhchhh
Q psy612 291 EQLLIQDK-----IQYLVLSGEL 308 (1005)
Q Consensus 291 ~~~l~~~~-----~~~~v~~~~~ 308 (1005)
..++..+. .+.+.++|.+
T Consensus 233 ~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 233 VFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp HHHHCHHHHTTCSSCEEEESSSG
T ss_pred HHHcCCcccCCeeCcEEEECcCh
Confidence 77665332 2444555554
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=4.1e-25 Score=236.36 Aligned_cols=214 Identities=14% Similarity=0.026 Sum_probs=167.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|+|||||++|||+++|+.|+++|++++ +.+|+ +..+++...... +.+||++++++++++++++.++||+||+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~-i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVA-CHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEE-ECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998654 45554 444443322222 3468999999999999999999999999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHHH
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 228 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l 228 (1005)
+|||||+.....++.+++.++|++++++|+.|+++++++++|+|++ ++.++||++||+++..+.+++..|+++|+++
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~---~~~G~IV~isS~~~~~~~~~~~~Y~asKaal 151 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK---RKSGHIIFITSATPFGPWKELSTYTSARAGA 151 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---cccceeecccccccccccccccccccccccH
Confidence 9999998653578999999999999999999999999999999764 3468899999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCceEEEEeCCcccCccccccc---------chhhhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 229 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---------NEQTDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 229 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---------~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+. .-+|+|....+..++..
T Consensus 152 ~~lt~~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~ 226 (252)
T d1zmta1 152 CTLANALSKELG--EYNIPVFAIGPNYLH-SEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226 (252)
T ss_dssp HHHHHHHHHHHG--GGTCCEEEEEESSBC-CBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc--ccCcEEEEEecCCCc-CcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999998865 455688888887664 4443221 11112223333332 44788888887776643
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.92 E-value=5.9e-25 Score=233.32 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=170.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++. +|+. +.+.+.+++.+.++.+++||++++++++++++++.+++|+|
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~-~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAV-DREE--RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCH--HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCH--HHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 68999999999999999999999999966554 5553 34445566778899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||... ..++.+.+.++|++++++|+.+++++.+++.|+| .+ .+.++++|| .+..+.+++..|+++|+
T Consensus 81 DiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~---~~--~~~i~~~ss-~a~~~~~~~~~Y~~sK~ 153 (241)
T d2a4ka1 81 HGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL---EE--GGSLVLTGS-VAGLGAFGLAHYAAGKL 153 (241)
T ss_dssp CEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC---CT--TCEEEEECC-CTTCCHHHHHHHHHCSS
T ss_pred cEecccccccc-ccchhhhhcccccccccccccccccccccccccc---cc--ccceeeccc-cccccccCccccchhhH
Confidence 99999999987 7899999999999999999999999999999974 22 344555555 55556689999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccch-hhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
++++|+++++.+.. ..++++.+|.+|... +.|.....+ ..+...+...+ +..+|+|..+++..++..
T Consensus 154 al~~lt~~lA~el~--~~gIrvN~I~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~ 222 (241)
T d2a4ka1 154 GVVGLARTLALELA--RKGVRVNVLLPGLIQ-TPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSE 222 (241)
T ss_dssp HHHHHHHHHHHHHT--TTTCEEEEEEECSBC-CGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHh--HhCCEEeeeccCcCC-CHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999865 556788999888774 556543332 22223333333 245888988888887753
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=1.2e-24 Score=233.79 Aligned_cols=223 Identities=12% Similarity=0.070 Sum_probs=175.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHH---cCCcEEEEecCCCchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~---~Ga~~vil~~r~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.+|++|||||++|||+++|+.|++ +|++++++.++.+.++++.++|... +.++.+++||++++++++++++.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 589999999999999999999997 6776555554445667777888654 56899999999999999999998876
Q ss_pred ----hcCCccEEEEcCcccCc--cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy612 142 ----NIGPIDGVLHIAGISGL--TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 215 (1005)
Q Consensus 142 ----~~g~idgvIh~AG~~~~--~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~ 215 (1005)
.++.+|++|||||...+ ..++.+.+.++|++++++|+.|+++++++++|+|++ .+...+.||++||+++..+.
T Consensus 85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-~~~~~g~Iv~isS~~~~~~~ 163 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQD-SPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCC-CTTCEEEEEEECCGGGTSCC
T ss_pred hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHh-cCCCcccccccccccccCCC
Confidence 35689999999998642 456889999999999999999999999999999642 11235799999999999999
Q ss_pred CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------chhhhHH--HHhcCCCCCCHHHHH
Q psy612 216 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------NEQTDFY--FKSSKQKVLHENDGL 287 (1005)
Q Consensus 216 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------~~~~~~~--~~~~g~~~l~~~~~~ 287 (1005)
++++.|+++|+++.+|++.++.+ ..++++.+|.+|... +.|.... .+..... ....| +..+|++..
T Consensus 164 ~~~~~Y~asKaal~~lt~~la~e----~~gIrVn~v~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~evA 237 (259)
T d1oaaa_ 164 KGWGLYCAGKAARDMLYQVLAAE----EPSVRVLSYAPGPLD-NDMQQLARETSKDPELRSKLQKLKSDG-ALVDCGTSA 237 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHH----CTTEEEEEEECCSBS-SHHHHHHHHHCSCHHHHHHHHHHHHTT-CSBCHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEcCCCC-CHHHHHhhhcCCCHHHHHHHHhcCCCC-CCCCHHHHH
Confidence 99999999999999999999887 346799999988775 4443211 0111111 11122 356888888
Q ss_pred HHHHHHHhc
Q psy612 288 KLFEQLLIQ 296 (1005)
Q Consensus 288 ~~l~~~l~~ 296 (1005)
+.+..++..
T Consensus 238 ~~i~~ll~~ 246 (259)
T d1oaaa_ 238 QKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 888877754
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.5e-24 Score=234.37 Aligned_cols=224 Identities=8% Similarity=0.002 Sum_probs=183.0
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
+-+||++|||||++|||+++|+.|+++|++++++.++.+.++++.+++. ..+..+.++.+|+++.+.+..+++.+.+.+
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 3479999999999999999999999999865555554455666666654 457788999999999999999999999999
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhH
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 223 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaa 223 (1005)
|.+|++|||||... ...+.+.+.++|++++++|+.|++.+++.++|+|++ ..+.||++||+++..+.++++.|++
T Consensus 91 g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~----~~G~ii~isS~~~~~~~p~~~~Y~a 165 (269)
T d1xu9a_ 91 GGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ----SNGSIVVVSSLAGKVAYPMVAAYSA 165 (269)
T ss_dssp TSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred CCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh----cCCcceEeccchhcCCCCCchHHHH
Confidence 99999999999987 788889999999999999999999999999999853 3488999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhccchh
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 300 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~~~~ 300 (1005)
+|+++.+|++.++.+...++.++++.+|.+|... +.|....... .......++++..+.+...+...+..
T Consensus 166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~-T~~~~~~~~~------~~~~~~~~~e~~a~~i~~~~~~~~~~ 235 (269)
T d1xu9a_ 166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID-TETAMKAVSG------IVHMQAAPKEECALEIIKGGALRQEE 235 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC-CHHHHHHSCG------GGGGGCBCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC-CcHHHHhccC------CccccCCCHHHHHHHHHHHhhcCCCE
Confidence 9999999999999886555667899999988774 3342211100 01123567888887777766555443
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=1.4e-24 Score=233.04 Aligned_cols=221 Identities=13% Similarity=0.051 Sum_probs=173.8
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
++|++|||||+| |||+++|+.|+++|+++ ++.+|++...+..+++...+..+.++++|++|+++++++++++.+++|
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V-~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEV-ALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEE-EEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEE-EEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 689999999886 99999999999999975 566676665555555555566778899999999999999999999999
Q ss_pred CccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhh
Q psy612 145 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 145 ~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
+||++|||||+... ...+.+.+.++|+.++++|+.+++.+.+++.|+| + +.++||++||+++..+.+++..|
T Consensus 86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~---~--~~G~Iv~isS~~~~~~~~~~~~Y 160 (256)
T d1ulua_ 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL---R--EGGGIVTLTYYASEKVVPKYNVM 160 (256)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE---E--EEEEEEEEECGGGTSBCTTCHHH
T ss_pred CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHh---c--cCCEEEEEeehHhcCCCCCchHH
Confidence 99999999998641 2356788999999999999999999999999874 2 24889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc---chhhhHHHHhcCCC-CCCHHHHHHHHHHHHhc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQK-VLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~ 296 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|.... .|.... .+..+...+...+. ..+|+|....+..++..
T Consensus 161 ~asKaal~~ltr~lA~ela--~~gIrVN~I~PG~i~t-~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 236 (256)
T d1ulua_ 161 AIAKAALEASVRYLAYELG--PKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSP 236 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCC-----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCCEEeeeccceeee-ccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999998865 4556888888887643 332221 11222233334443 45788888888777653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.91 E-value=9.6e-24 Score=225.22 Aligned_cols=191 Identities=15% Similarity=0.093 Sum_probs=156.0
Q ss_pred CCEEEEECChhHHHHHHHHHHHH---cCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH--hh
Q psy612 68 GGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII--NN 142 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~---~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~--~~ 142 (1005)
-|++|||||++|||+++|+.|++ +|+++++..++.+..+++. ++.+.+.++.+++||++|+++++++++++. .+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 47999999999999999999974 6666555554445555554 444456789999999999999999999885 36
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc--------CCCcEEEEecCcccccC
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK--------NKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~--------~~~~~iV~~SSia~~~g 214 (1005)
+++||++|||||+......+.+.+.++|++++++|+.|+++++++++|+|++... ...+.+|++||+++..+
T Consensus 81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~ 160 (248)
T d1snya_ 81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 160 (248)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence 8999999999998764567889999999999999999999999999999976432 23688999999988754
Q ss_pred ---CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccc
Q psy612 215 ---DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 262 (1005)
Q Consensus 215 ---~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 262 (1005)
.++...|+++|+++.+|++.++.+.. ..++++.+|++|.. ++.|.
T Consensus 161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~--~~gI~vn~v~PG~v-~T~m~ 208 (248)
T d1snya_ 161 GNTDGGMYAYRTSKSALNAATKSLSVDLY--PQRIMCVSLHPGWV-KTDMG 208 (248)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCSB-CSTTT
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCCCcc-cCCcc
Confidence 45788999999999999999988754 45679999988755 55554
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.91 E-value=1.5e-23 Score=226.82 Aligned_cols=221 Identities=12% Similarity=0.061 Sum_probs=178.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
++|++|||||++|||+++|+.|+++|++++++.+|++ ..+++.+++++.+.++.+++||++|+++++++++++.+++|+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999998777776653 456777888888999999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCCCChhhhHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 224 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~g~~~Yaaa 224 (1005)
||++|||||... ..++.+.+.++|++++++|+.|++++.+++.|+|+ ..+.+++++|+.+.. +.++++.|+++
T Consensus 97 idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~-----~~g~~i~i~s~~~~~~~~~~~~~Y~as 170 (272)
T d1g0oa_ 97 LDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-----IGGRLILMGSITGQAKAVPKHAVYSGS 170 (272)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC-----TTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred CCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccc-----cccccccccccccccccccchhhHHHH
Confidence 999999999987 78999999999999999999999999999999963 246788888887655 57788999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc------------chhh--hHHHHhcCC-CCCCHHHHHHH
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQT--DFYFKSSKQ-KVLHENDGLKL 289 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~--~~~~~~~g~-~~l~~~~~~~~ 289 (1005)
|+++.+|++.++.+.. ..++++.+|.+|... +.|.... .+.. ....+...+ +..+++|.+.+
T Consensus 171 Kaal~~ltk~lA~e~~--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~ 247 (272)
T d1g0oa_ 171 KGAIETFARCMAIDMA--DKKITVNVVAPGGIK-TDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247 (272)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBS-SHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--hhCeEEEEEccCCcC-ChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 9999999999998865 445688888877664 3332110 0000 011122222 45678888888
Q ss_pred HHHHHhc
Q psy612 290 FEQLLIQ 296 (1005)
Q Consensus 290 l~~~l~~ 296 (1005)
+..++..
T Consensus 248 v~fL~s~ 254 (272)
T d1g0oa_ 248 VCFLASN 254 (272)
T ss_dssp HHHHHSG
T ss_pred HHHHhCc
Confidence 8877653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.8e-24 Score=234.65 Aligned_cols=207 Identities=16% Similarity=0.075 Sum_probs=166.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
.+++|||||++|||+++|+.|++++..+|+++.|+ +..++..++|++.+.++.++.||++|.++++++++++.+++|+|
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 35779999999999999999999844456666665 56678888899888899999999999999999999999999999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----------
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 216 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~---------- 216 (1005)
|+||||||+.. ...+.+.+.++|++++++|+.|++++++.++|+|+ +.++||++||+++..+.+
T Consensus 83 DiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-----~~g~ivnisS~~~~~~~~~~~~y~~~k~ 156 (275)
T d1wmaa1 83 DVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK-----PQGRVVNVSSIMSVRALKSCSPELQQKF 156 (275)
T ss_dssp EEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE-----EEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred EEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCcccccccceeccccccchhhhhhh
Confidence 99999999987 67788888999999999999999999999999853 247899999988754322
Q ss_pred -------------------------------CChhhhHHHHHHHHHHHHHHhcccc--ccCCceEEEEeCCcccCccccc
Q psy612 217 -------------------------------GSCDYAMGNRFQTVYAKYLNNKNIY--KKYTNKLITINWPLWNNSKFKI 263 (1005)
Q Consensus 217 -------------------------------g~~~Yaaana~l~~la~~~~~~g~~--~~~~~~~~si~wg~w~~~Gm~~ 263 (1005)
+...|+++|+++..|+++++.+... ...++++.+|++|.. .+.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v-~T~m~~ 235 (275)
T d1wmaa1 157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDMAG 235 (275)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB-CSTTTC
T ss_pred cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc-cCCccc
Confidence 2357999999999999887665321 234568889987754 555542
Q ss_pred ccchhhhHHHHhcCCCCCCHHHHHHHHHHHH
Q psy612 264 GNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 294 (1005)
Q Consensus 264 ~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l 294 (1005)
. ....+|+|+.+....+.
T Consensus 236 ~-------------~~~~~pee~A~~~~~~a 253 (275)
T d1wmaa1 236 P-------------KATKSPEEGAETPVYLA 253 (275)
T ss_dssp T-------------TCSBCHHHHTHHHHHHH
T ss_pred C-------------cccCCHHHHHHHHHHHH
Confidence 1 12457888877665543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=2.8e-23 Score=219.43 Aligned_cols=220 Identities=14% Similarity=0.089 Sum_probs=167.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++ +.|++ +.+++.+. .++.||+++. ++.+.+++|+|
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~-~~r~~------~~l~~~~~--~~~~~Dv~~~------~~~~~~~~g~i 67 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTI-CARNE------ELLKRSGH--RYVVCDLRKD------LDLLFEKVKEV 67 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCH------HHHHHTCS--EEEECCTTTC------HHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCH------HHHHhcCC--cEEEcchHHH------HHHHHHHhCCC
Confidence 5899999999999999999999999996554 45553 23444444 4678999874 45566788999
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 226 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana 226 (1005)
|++|||||+.. ..++.+++.++|++++++|+.++++++++++|+|++ ++.+.||++||+.+..+.++...|+++|+
T Consensus 68 D~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~~~G~ii~i~S~~~~~~~~~~~~Y~asKa 143 (234)
T d1o5ia_ 68 DILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE---KGWGRIVAITSFSVISPIENLYTSNSARM 143 (234)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccc---cccccccccccccccccccccccchhHHH
Confidence 99999999887 889999999999999999999999999999999754 35688999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCceEEEEeCCcccCcccccc-cc-hhhhHHHHhcCCC-CCCHHHHHHHHHHHHhccc----h
Q psy612 227 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NN-EQTDFYFKSSKQK-VLHENDGLKLFEQLLIQDK----I 299 (1005)
Q Consensus 227 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~-~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~~~----~ 299 (1005)
++.+|++.++.+.. ..++++.+|.+|.... .|... .. .......+...+. ..+|+|....+..++.... .
T Consensus 144 al~~ltk~lA~ela--~~gIrVN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG 220 (234)
T d1o5ia_ 144 ALTGFLKTLSFEVA--PYGITVNCVAPGWTET-ERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG 220 (234)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-TTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhc--ccCeEEeecccCccch-hhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcC
Confidence 99999999988865 4456888888876644 33221 11 1122222333332 3478888888877664322 2
Q ss_pred hhhhhchhh
Q psy612 300 QYLVLSGEL 308 (1005)
Q Consensus 300 ~~~v~~~~~ 308 (1005)
+.+.++|.+
T Consensus 221 ~~i~vDGG~ 229 (234)
T d1o5ia_ 221 QTIVVDGGL 229 (234)
T ss_dssp CEEEESTTC
T ss_pred cEEEECccc
Confidence 344455544
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.90 E-value=5e-23 Score=219.89 Aligned_cols=211 Identities=13% Similarity=0.118 Sum_probs=161.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.|++|||||++|||+++|+.|+++|+. +|++.+|+... .+++++ .+.++.+++||++|.++++++++++.+.+|.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~---~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 79 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK---ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG---CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHH---HHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence 489999999999999999999999984 67777776432 123333 3678999999999999999999999988774
Q ss_pred --ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcC--------CCcEEEEecCcccccCC
Q psy612 146 --IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--------KLDFVCYFSSSSAILGD 215 (1005)
Q Consensus 146 --idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~--------~~~~iV~~SSia~~~g~ 215 (1005)
||+||||||+..+..++.+.+.++|++++++|+.|++++++.++|+|++.... ..+.++++||..+....
T Consensus 80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 159 (250)
T d1yo6a1 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence 99999999987645778899999999999999999999999999999765432 24688999887665432
Q ss_pred -------CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHH
Q psy612 216 -------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 288 (1005)
Q Consensus 216 -------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~ 288 (1005)
.+..+|+++|+++.+|++.++.+.. ..++++.+|++|.. .+.|... ...++++++.+
T Consensus 160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~--~~gI~v~~i~PG~v-~T~m~~~-------------~~~~~~e~~a~ 223 (250)
T d1yo6a1 160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVLVVNFCPGWV-QTNLGGK-------------NAALTVEQSTA 223 (250)
T ss_dssp CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECCCC---------------------------HHHHH
T ss_pred CcccccchhHHHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCCC-CCCCCCC-------------CCCCCHHHHHH
Confidence 3456799999999999999998854 55679999987755 4556421 12467888887
Q ss_pred HHHHHHhcc
Q psy612 289 LFEQLLIQD 297 (1005)
Q Consensus 289 ~l~~~l~~~ 297 (1005)
.+...+...
T Consensus 224 ~~~~~~~~~ 232 (250)
T d1yo6a1 224 ELISSFNKL 232 (250)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 777776543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.90 E-value=8.9e-23 Score=223.34 Aligned_cols=224 Identities=17% Similarity=0.073 Sum_probs=180.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
+||++|||||++|||+++|+.|+++|++++++.++.+..++..+++.+ .+.++.+++||++++++++++++.+.+++|+
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 103 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 103 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence 689999999999999999999999999776666555666666766653 4788999999999999999999999999999
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||++|||||... ...+.+.+.++|++++.+|+.+.+.+.+...+.+. .....+.++++||.++..+.+++..|+++|
T Consensus 104 iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~i~~~ss~~~~~~~~~~~~YsasK 180 (294)
T d1w6ua_ 104 PNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLI--KAQKGAAFLSITTIYAETGSGFVVPSASAK 180 (294)
T ss_dssp CSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred cchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccc--cccccccccccccchhhhcccccchHHHHH
Confidence 999999999987 78899999999999999999999999888877763 345677899999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc----chhhhHHHHhcCC-CCCCHHHHHHHHHHHHhc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~ 296 (1005)
+++.+|+++++.+.. ..++++.+|.+|.... .|.... ........+...+ +..+|+|...++..++..
T Consensus 181 aal~~ltk~lA~ela--~~gIrVN~I~PG~i~T-~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd 253 (294)
T d1w6ua_ 181 AGVEAMSKSLAAEWG--KYGMRFNVIQPGPIKT-KGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSD 253 (294)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHh--HhCeEEEEEccCcccc-chhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999999998854 5567888998887643 332211 1112222233333 345789998888887753
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.8e-22 Score=215.19 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=176.0
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+||++|||||++|||+++|+.|+++|++++++.++.+..++..+++ +.......+|+.+.+.++.....+...++.+
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRV 80 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccccc
Confidence 6899999999999999999999999997666665556655555544 6678899999999999999999999999999
Q ss_pred cEEEEcCcccCc-----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHH---hcCCCcEEEEecCcccccCCCCC
Q psy612 147 DGVLHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKL---QKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 147 dgvIh~AG~~~~-----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~---~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
|.+++++++... ..++.+.+.++|++++++|+.|++++.+++.|+|... +..+.+.||++||+++..+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~ 160 (248)
T d2o23a1 81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ 160 (248)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc
Confidence 999999887541 2456778899999999999999999999999997431 22356799999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC--CCCCHHHHHHHHHHHHh
Q psy612 219 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ--KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 219 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~--~~l~~~~~~~~l~~~l~ 295 (1005)
+.|+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|.....+. .....+...+ +..+|+|.+.++..++.
T Consensus 161 ~~Y~asKaal~~lt~~la~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s 237 (248)
T d2o23a1 161 AAYSASKGGIVGMTLPIARDLA--PIGIRVMTIAPGLFG-TPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE 237 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-CC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhc--ccCcceeeeccCcee-cchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence 9999999999999999999865 556788999988774 4554432222 2223333322 34589999998887765
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=5e-22 Score=211.05 Aligned_cols=215 Identities=13% Similarity=0.135 Sum_probs=164.3
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||++|||+++|+.|+++|+++++. .|++ +..+++.+. ..+....+|+.+.+.++. ..+.+++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~-~r~~---~~l~~~~~~-~~~~~~~~d~~~~~~~~~----~~~~~~~i 75 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIAT-DINE---SKLQELEKY-PGIQTRVLDVTKKKQIDQ----FANEVERL 75 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESCH---HHHGGGGGS-TTEEEEECCTTCHHHHHH----HHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEE-eCCH---HHHHHHHhc-cCCceeeeeccccccccc----cccccccc
Confidence 68999999999999999999999999865555 5543 222333333 347788899998765554 45567899
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaan 225 (1005)
|+||||||... ..++.+.+.++|++++++|+.+++.+.+++.|+|++ .+.+.||++||+++. .+.+++..|+++|
T Consensus 76 d~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 76 DVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA---QKSGNIINMSSVASSVKGVVNRCVYSTTK 151 (245)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---HTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred eeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCccccc---CCCceeeeeechhhccCCccchhHHHHHH
Confidence 99999999988 788999999999999999999999999999999754 356889999998875 5789999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCccccccc-------chhhhHHHHhcCCC-CCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------NEQTDFYFKSSKQK-VLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~~~~~~~~~~~g~~-~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+|+++++.+.. ..++++.+|.+|... +.|.... ....+...+...+. ..+|+|..+.+..++...
T Consensus 152 aal~~l~r~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~ 228 (245)
T d2ag5a1 152 AAVIGLTKSVAADFI--QQGIRCNCVCPGTVD-TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228 (245)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEESCEE-CHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeeceee-chhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 999999999998854 556788999888764 4442211 01112223333332 456888888888876543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.87 E-value=1.3e-21 Score=212.80 Aligned_cols=221 Identities=12% Similarity=0.005 Sum_probs=163.3
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhC-CCcEEEE-----------------EecCCCHH
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYI-----------------QVDVSDKL 130 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~-g~~v~~~-----------------~~Dvtd~~ 130 (1005)
++|||||++|||+++|+.|+++|+++++..+|++. .+++.+++.+. +..+..+ .+|+++++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 78999999999999999999999988877777643 45556666543 3444444 45699999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHH--------------HHHhhhhhHHHHHHHHHHHHHHH--
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFY--------------SVLSSKISGTIALNYALENTILK-- 194 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~--------------~~l~~kv~g~~~L~~~~~~~l~~-- 194 (1005)
+++++++++.++||+||+||||||+.. ..++.+.+.++|+ .++.+|+.+++++.+.+.+.+..
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 999999999999999999999999987 6777777666654 57999999999999998887542
Q ss_pred -HhcCCCcEEEEecCcccccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHH
Q psy612 195 -LQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFY 272 (1005)
Q Consensus 195 -~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~ 272 (1005)
+.....+.||+++|..+..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|... +..... ...+..
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrvN~I~PG~t~---~~~~~~~~~~~~~ 237 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLSV---LVDDMPPAVWEGH 237 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBC---CGGGSCHHHHHHH
T ss_pred HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC--Ccccccccccccccc---ccccCCHHHHHHH
Confidence 2334567899999999999999999999999999999999998865 445677788776421 111111 112222
Q ss_pred HHhcC--CCCCCHHHHHHHHHHHHhc
Q psy612 273 FKSSK--QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 273 ~~~~g--~~~l~~~~~~~~l~~~l~~ 296 (1005)
.+... -+..+|+|..+++..++..
T Consensus 238 ~~~~pl~~R~~~peeiA~~v~fL~S~ 263 (284)
T d1e7wa_ 238 RSKVPLYQRDSSAAEVSDVVIFLCSS 263 (284)
T ss_dssp HTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence 22222 1245799999988887653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.85 E-value=7.6e-21 Score=200.82 Aligned_cols=208 Identities=13% Similarity=0.048 Sum_probs=157.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh--hcCC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN--NIGP 145 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~--~~g~ 145 (1005)
.+.+|||||++|||+++|+.|+++|++++++ +|++.. .......+.+|+.+.+......+.+.. ++|+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNI-DLSAND---------QADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEE-ESSCCT---------TSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCchh---------cccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 3567999999999999999999999875554 554321 122445667888888888777777665 4699
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
||+||||||+.....++.+.+.++|+.++++|+.+++++.++++|+| + +.+.||++||+++..+.++...|+++|
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m---~--~~g~Iv~isS~~~~~~~~~~~~Y~asK 146 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL---K--PGGLLQLTGAAAAMGPTPSMIGYGMAK 146 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---E--EEEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccc---c--cceEEEEeccHHhcCCcccccchHHHH
Confidence 99999999986534456666788999999999999999999999985 3 248999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 226 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 226 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
+++.+|++.++.+....+.++++.+|.+|.. ++.|...... ...-....++++..+.+...+..+
T Consensus 147 aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~-~T~~~~~~~~------~~~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMP------NADHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCB-CCHHHHHHST------TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEecCcC-cCcchhhhCc------CCccccCCCHHHHHHHHHHHhcCc
Confidence 9999999999877532345778899987765 3444221110 001113467888888776666554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.85 E-value=6.8e-21 Score=201.28 Aligned_cols=207 Identities=12% Similarity=0.044 Sum_probs=160.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--C
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI--G 144 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~--g 144 (1005)
++|++|||||++|||+++|+.|+++|++++++..+... .......+.+|.++.+++..+...+.+.+ +
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999999999976665443321 12345667889998888888888876654 4
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHH
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 224 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaa 224 (1005)
+||+||||||.......+.+.+.++|++++++|+.+++++.++++|+| + +.++||++||.++..+.++...|+++
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m---~--~~G~Iv~isS~~~~~~~~~~~~Y~as 145 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL---K--EGGLLTLAGAKAALDGTPGMIGYGMA 145 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---E--EEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhc---c--cccceeEEccHHHcCCccCCcccHHH
Confidence 799999999975534566777889999999999999999999999985 3 25899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 225 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 225 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++.+|++.++.+......++++.+|.+|.. ++.|..... .... ....++++..+.+..++..
T Consensus 146 Kaal~~lt~~la~El~~~~~gI~vn~v~PG~v-~T~~~~~~~-------~~~~~~~~~~pe~va~~~~~l~s~ 210 (236)
T d1dhra_ 146 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSM-------PEADFSSWTPLEFLVETFHDWITG 210 (236)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE-ECHHHHHHS-------TTSCGGGSEEHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEEEeccC-cCCcchhhC-------ccchhhcCCCHHHHHHHHHHHhCC
Confidence 99999999999987532245789999997765 344422111 0011 1235677788777776643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=5.9e-20 Score=196.67 Aligned_cols=234 Identities=10% Similarity=-0.002 Sum_probs=178.0
Q ss_pred cCCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
-++|++|||||++ |||+++|+.|+++|+++++.. |++...+..+++........++.+|+++..++...++++.+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY-QNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE-SSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 3789999999998 899999999999999866554 5555555555555555567788999999999999999999999
Q ss_pred CCccEEEEcCcccCc----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCCh
Q psy612 144 GPIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 219 (1005)
Q Consensus 144 g~idgvIh~AG~~~~----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~ 219 (1005)
+++|++||||+.... .........+.|...+..++.+.+.+.+.+.+.| + +.+.||++||+.+..+.++++
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~Ii~iss~~~~~~~~~~~ 156 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML---N--PGSALLTLSYLGAERAIPNYN 156 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE---E--EEEEEEEEECGGGTSBCTTTT
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc---c--CCcEEEEecchhhccCCCCcH
Confidence 999999999988641 1234567888899999999999999999987763 2 356799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh---hhHHHHhcCC-CCCCHHHHHHHHHHHHh
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLI 295 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~~~~~~l~~~l~ 295 (1005)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .....+...+ +..+|+|....+..++.
T Consensus 157 ~Y~~sKaal~~ltr~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s 233 (258)
T d1qsga_ 157 VMGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIR-TLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 233 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHhC--ccCceeecccccccc-cccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999998865 566799999988775 3443322111 1112223333 34678888888777664
Q ss_pred ccc----hhhhhhchhh
Q psy612 296 QDK----IQYLVLSGEL 308 (1005)
Q Consensus 296 ~~~----~~~~v~~~~~ 308 (1005)
... .+.+.+++.|
T Consensus 234 ~~s~~itG~~i~vDGG~ 250 (258)
T d1qsga_ 234 DLSAGISGEVVHVDGGF 250 (258)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred chhcCccCceEEECcCH
Confidence 332 1334455554
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=3e-19 Score=188.82 Aligned_cols=224 Identities=16% Similarity=0.166 Sum_probs=165.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|++|||||++|||+++|+.|+++|++++++.++.+ +.+....++|+++......+.......+ ..+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA-PLF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence 689999999999999999999999997665554432 2356778999999999999988887665 455
Q ss_pred EEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHH---HhcCCCcEEEEecCcccccCCCCChhh
Q psy612 148 GVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILK---LQKNKLDFVCYFSSSSAILGDFGSCDY 221 (1005)
Q Consensus 148 gvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~---~~~~~~~~iV~~SSia~~~g~~g~~~Y 221 (1005)
.+++++++... .......+.+.|++++++|+.+.+.+.+.+.+.+.+ +.+...++||++||+++..+.++++.|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y 147 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 147 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence 66666665431 234556788999999999999999999999988643 233457899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchh-hhHHHHhcCC--CCCCHHHHHHHHHHHHhccc
Q psy612 222 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ--KVLHENDGLKLFEQLLIQDK 298 (1005)
Q Consensus 222 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~--~~l~~~~~~~~l~~~l~~~~ 298 (1005)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .........+ +.-+|+|...++..++....
T Consensus 148 ~asKaal~~lt~~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~ 224 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELA--GWGIRVVTVAPGLFD-TPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPM 224 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSCS-SHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHh--hcCCceeeecCCccc-ccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCC
Confidence 9999999999999998865 456788899887764 3443322222 1122222221 23489999999888776431
Q ss_pred --hhhhhhchh
Q psy612 299 --IQYLVLSGE 307 (1005)
Q Consensus 299 --~~~~v~~~~ 307 (1005)
.+.+.++|.
T Consensus 225 iTG~~i~VDGG 235 (241)
T d1uaya_ 225 LNGEVVRLDGA 235 (241)
T ss_dssp CCSCEEEESTT
T ss_pred CCCCEEEECCc
Confidence 234444444
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.81 E-value=1.6e-19 Score=200.22 Aligned_cols=185 Identities=15% Similarity=0.117 Sum_probs=143.9
Q ss_pred CCCEEEEEC--ChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--C-----------CCcEEEEE--------
Q psy612 67 QGGTYLITG--GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--F-----------NNKAIYIQ-------- 123 (1005)
Q Consensus 67 ~~~~~lITG--g~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--~-----------g~~v~~~~-------- 123 (1005)
.+|++|||| +++|||+++|+.|+++|+++++.. +............. . ........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGI-WPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEe-CchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence 379999999 668999999999999999766544 44332222221111 0 11122333
Q ss_pred ------------ecCCCHHHHHHHHHHHHhhcCCccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 124 ------------VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 124 ------------~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
+|+++.++++++++.+.++||+||++|||||.... .+++.+++.++|++++++|+.|++.+.|+++|
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 36668888999999999999999999999997652 35788999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEecCcccccCCCC-ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 191 TILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 191 ~l~~~~~~~~~~iV~~SSia~~~g~~g-~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
+| + +.++||++||.++..+.|+ .+.|+++|+++.+|++.++.+..+ ..++++.+|.+|+...
T Consensus 160 ~m---~--~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~-~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 160 IM---K--PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGR-NYNIRINTISAGPLKS 222 (329)
T ss_dssp GE---E--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCCCC
T ss_pred hc---c--cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhc-ccCcEEEEEecCcccc
Confidence 85 2 3578999999999999888 567999999999999999877421 2356899999887754
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.79 E-value=1.8e-18 Score=185.66 Aligned_cols=222 Identities=13% Similarity=0.030 Sum_probs=162.4
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHhC-CCcEEEEEecCCC----HHHHHHHHHHHHhhc
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYIQVDVSD----KLKMISEINSIINNI 143 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~~-g~~v~~~~~Dvtd----~~~v~~~~~~i~~~~ 143 (1005)
|+|||||++|||+++|+.|+++|++++++.++.+. .+++.+++.+. +.++.++.+|+.+ ++.+.++++.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999977766666543 35566666554 5677777766644 677888889999999
Q ss_pred CCccEEEEcCcccCccchh-----------ccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh--cCCCcEEEEecCcc
Q psy612 144 GPIDGVLHIAGISGLTSNI-----------LEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFVCYFSSSS 210 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~-----------~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~--~~~~~~iV~~SSia 210 (1005)
|+||++|||||+.. ...+ .+...+.+...+..|+.+.+...+...+.+.... ......++++||..
T Consensus 83 g~iDilvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 83 GRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp SCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred CCCCEEEECCccCC-CCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 99999999999875 3322 2334566888888999998888887776653221 23457889999999
Q ss_pred cccCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCC-CC-CCHHHHHH
Q psy612 211 AILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KV-LHENDGLK 288 (1005)
Q Consensus 211 ~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~-l~~~~~~~ 288 (1005)
+..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|..... +... ....+...+...+ +. -+|+|...
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~I~PG~i~t~-~~~~-~~~~~~~~~~~pl~r~~~~peeva~ 237 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELA--PRHIRVNAVAPGLSLLP-PAMP-QETQEEYRRKVPLGQSEASAAQIAD 237 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBSCC-SSSC-HHHHHHHHTTCTTTSCCBCHHHHHH
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhC--ccCcEEEEeccCcEecc-ccCC-HHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999999999999999998855 45568888888765432 2221 1222223333333 22 48999999
Q ss_pred HHHHHHhc
Q psy612 289 LFEQLLIQ 296 (1005)
Q Consensus 289 ~l~~~l~~ 296 (1005)
++..++..
T Consensus 238 ~v~fL~s~ 245 (266)
T d1mxha_ 238 AIAFLVSK 245 (266)
T ss_dssp HHHHHHSG
T ss_pred HHHHHhCc
Confidence 88877754
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.78 E-value=2e-18 Score=186.39 Aligned_cols=234 Identities=14% Similarity=0.037 Sum_probs=169.0
Q ss_pred cCCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 66 KQGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 66 ~~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
-++|++|||||+| |||+++|+.|+++|+++++ ++|++..++..+++.+.+....+..+|+++++++.++++++.+.+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i-~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAF-TYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEE-EESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 3699999999765 9999999999999997555 456666666777777777788889999999999999999999999
Q ss_pred CCccEEEEcCcccCc---cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChh
Q psy612 144 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 220 (1005)
Q Consensus 144 g~idgvIh~AG~~~~---~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~ 220 (1005)
|++|++|||+|.... ...+.+...+.+...+.....+...+.+...+ .......|+++||.+...+.+++..
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~s~~~~~~~~~~~~~ 156 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKP-----LLNNGASVLTLSYLGSTKYMAHYNV 156 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG-----GEEEEEEEEEEECGGGTSBCTTCHH
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccc-----ccccCcceeeecccccccccccchh
Confidence 999999999998652 22344455666666666666665555555332 1234566788888887888899999
Q ss_pred hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHhcC-CCCCCHHHHHHHHHHHHhc
Q psy612 221 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 296 (1005)
Q Consensus 221 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~~~~~~l~~~l~~ 296 (1005)
|+++|+++.+|+++++.+.. ..++++.+|.+|+... .|..... ........... -+..+|+|...++..++..
T Consensus 157 y~asK~al~~ltr~lA~e~~--~~GIrvN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~ 233 (274)
T d2pd4a1 157 MGLAKAALESAVRYLAVDLG--KHHIRVNALSAGPIRT-LASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCCC-TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHhhHHHhc--CcCceecccccCcccC-ccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhCh
Confidence 99999999999999888754 4556888998887654 3433221 11111122222 2457889998888887754
Q ss_pred cc----hhhhhhchhh
Q psy612 297 DK----IQYLVLSGEL 308 (1005)
Q Consensus 297 ~~----~~~~v~~~~~ 308 (1005)
.. .+.+.+++.|
T Consensus 234 ~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 234 LSSGVSGEVHFVDAGY 249 (274)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhCCCcCceEEECCCh
Confidence 32 2445556665
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.72 E-value=2.5e-17 Score=179.68 Aligned_cols=234 Identities=12% Similarity=0.052 Sum_probs=157.6
Q ss_pred CCCEEEEECChh--HHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC----------C--Cc-EEEEEec------
Q psy612 67 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF----------N--NK-AIYIQVD------ 125 (1005)
Q Consensus 67 ~~~~~lITGg~g--GIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~----------g--~~-v~~~~~D------ 125 (1005)
++|++|||||++ |||+++|+.|+++|+++++. .|+.........++.. + .. -....+|
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG-TWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE-EEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEE-eCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 689999999875 99999999999999976554 4443322222222211 1 11 1233343
Q ss_pred --------------CCCHHHHHHHHHHHHhhcCCccEEEEcCcccCc-cchhccCCHHHHHHHHhhhhhHHHHHHHHHHH
Q psy612 126 --------------VSDKLKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 190 (1005)
Q Consensus 126 --------------vtd~~~v~~~~~~i~~~~g~idgvIh~AG~~~~-~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~ 190 (1005)
.++...++++++++.++||+||+||||||.... ..++.+.+.++|++++++|+.+.+++.+++.+
T Consensus 86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 165 (297)
T d1d7oa_ 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence 245556789999999999999999999997531 46789999999999999999999999999887
Q ss_pred HHHHHhcCCCcEEEEecCcccc-cCCCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---
Q psy612 191 TILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--- 266 (1005)
Q Consensus 191 ~l~~~~~~~~~~iV~~SSia~~-~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--- 266 (1005)
+| . ..+.++.++|.++. ...+++..|+++|+++.++++.+..+.. ...++++.+|.+|... +.|.....
T Consensus 166 ~~---~--~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~-~~~gIrvN~I~PG~i~-T~~~~~~~~~~ 238 (297)
T d1d7oa_ 166 IM---N--PGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLG-SRAAKAIGFID 238 (297)
T ss_dssp GE---E--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCB-CCCSSCCSHHH
T ss_pred Hh---h--cCCcceeeeehhhcccccccccceecccccccccccccchhcc-ccceEEeccccccccc-chhhhhccCCH
Confidence 63 2 23456666666554 4457888999999999999998766532 1234688899887664 44433221
Q ss_pred hhhhHHHHhcCC-CCCCHHHHHHHHHHHHhccc----hhhhhhchhh
Q psy612 267 EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 308 (1005)
Q Consensus 267 ~~~~~~~~~~g~-~~l~~~~~~~~l~~~l~~~~----~~~~v~~~~~ 308 (1005)
...+...+...+ +..+|+|....+..++.... .+.+.+++.+
T Consensus 239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 111222233333 24578888888777664321 1344455554
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.71 E-value=1.2e-16 Score=171.52 Aligned_cols=183 Identities=11% Similarity=0.103 Sum_probs=144.8
Q ss_pred ccCCCEEEEEC--ChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 65 IKQGGTYLITG--GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 65 ~~~~~~~lITG--g~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
+-++|++|||| |++|||+++|+.|+++|+++++ +.|+. ++..+++. ..+.++..+.||+++++++..+++.+.+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil-~~~~~--~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVL-TGFDR--LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEE-EECSC--HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEE-EeCCh--HHHHHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence 34799999999 5679999999999999997555 45543 23333443 4577788899999999999999988876
Q ss_pred h---cCCccEEEEcCcccCc----cchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy612 142 N---IGPIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 214 (1005)
Q Consensus 142 ~---~g~idgvIh~AG~~~~----~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g 214 (1005)
. +++||++|||||.... ...+.+.+.++|.+.+..++.+.+.+.+...++ ...+.+++++|.....+
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~~~~~~ 153 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI------MNPGGSIVGMDFDPSRA 153 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEEECCCSSC
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh------ccccccccccccccccc
Confidence 5 5789999999997531 345678899999999999999999888886543 12344666777788888
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 215 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 215 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
.++...|+++|+++.+|+++++.+.. ..++++.+|.+|....
T Consensus 154 ~p~~~~y~~sK~a~~~ltr~lA~e~~--~~gIrVN~V~PG~v~T 195 (268)
T d2h7ma1 154 MPAYNWMTVAKSALESVNRFVAREAG--KYGVRSNLVAAGPIRT 195 (268)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCCC
T ss_pred Ccccchhhccccchhhccccchhhhh--ccCCcceEEecCCCCC
Confidence 99999999999999999999998855 4557888898886643
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.59 E-value=9.5e-15 Score=155.34 Aligned_cols=210 Identities=16% Similarity=0.093 Sum_probs=137.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh-cCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-IGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-~g~id 147 (1005)
|++|||||++|||+++|+.|+++|++++++.++... ..+|+++.+..+.....+..+ .+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999986666554331 357999999988877666544 46799
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCc------------------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS------------------ 209 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSi------------------ 209 (1005)
++|||||+.. . .+.|..+..+|..+...+.+...+.+. ....+.+.++++.
T Consensus 65 ~lv~~Ag~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (257)
T d1fjha_ 65 GLVLCAGLGP-Q-------TKVLGNVVSVNYFGATELMDAFLPALK---KGHQPAAVVISSVASAHLAFDKNPLALALEA 133 (257)
T ss_dssp EEEECCCCCT-T-------CSSHHHHHHHHTHHHHHHHHHHHHHHH---TSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred EEEEcCCCCC-c-------HHHHHHHHHHHHHHHHHHHHHhhhhhh---hhccCcceeeeeccccchhhhhhhhhhhccC
Confidence 9999999754 2 234677889999999999988888743 3334445554443
Q ss_pred ---------ccccCC-CCChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc---hhhhHHHHh-
Q psy612 210 ---------SAILGD-FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKS- 275 (1005)
Q Consensus 210 ---------a~~~g~-~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~- 275 (1005)
.+..+. ++...|+++|+++.+|+++++.+.. ..++++.+|.+|... +.|..... ...+...+.
T Consensus 134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~ 210 (257)
T d1fjha_ 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG--EAGVRLNTIAPGATE-TPLLQAGLQDPRYGESIAKFV 210 (257)
T ss_dssp TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECC----------------------CC
T ss_pred CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc--cccccccccccCCcC-ChhHHhhcCCHHHHHHHHhcC
Confidence 222222 2456799999999999999988755 455688888877663 44432211 111111111
Q ss_pred cCC-CCCCHHHHHHHHHHHHhccc----hhhhhhchhhH
Q psy612 276 SKQ-KVLHENDGLKLFEQLLIQDK----IQYLVLSGELE 309 (1005)
Q Consensus 276 ~g~-~~l~~~~~~~~l~~~l~~~~----~~~~v~~~~~~ 309 (1005)
..+ +.-+|+|....+..++.... .+.+.++|.+.
T Consensus 211 ~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t 249 (257)
T d1fjha_ 211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp CSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence 112 23468888888877664332 24455666654
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=99.35 E-value=2.9e-13 Score=117.94 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 411 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~ 411 (1005)
+.+++.|++.+++.+++++++|+.+.+|.+||+|||++++|..+|+++||++++++.+|+|||+++|++|+..++.+
T Consensus 8 d~l~~~l~e~~~~~~g~~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~~l~~ 84 (86)
T d2af8a_ 8 DDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAE 84 (86)
T ss_dssp HHHHHHHHHTTCCCSCCCCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHHHhhc
Confidence 44667777777778889999999999999999999999999999999999999999999999999999999887654
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=99.34 E-value=5.2e-13 Score=113.34 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHH
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFI 406 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~ 406 (1005)
..+++.|.+.|+++|+++ .|+++++|+++|+|||+++++.++|+++|++++++.++|+|||+++||+||.
T Consensus 6 ~~~E~~l~~i~~~vL~~~--~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 6 NAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp SHHHHHHHHHHHHHTTSS--CCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCC--CCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence 357888999999999984 6999999999999999999999999999999999999999999999999984
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.30 E-value=9.9e-14 Score=140.63 Aligned_cols=150 Identities=12% Similarity=0.027 Sum_probs=102.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
++|++|||||+||||+++|+.|+++|++++++.++.+..++..+++.... .+....+|++|.++++++ ++++
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~-------~~~i 93 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEA-------VKGA 93 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHH-------TTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHH-------hcCc
Confidence 68999999999999999999999999875555444455566666665432 345688999999887765 4679
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CCCCChhhhHHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMGN 225 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~-g~~g~~~Yaaan 225 (1005)
|+||||||+.. ..++.++|+.+++.|+.+.+++...+.+. ... .......+++..+.- ...+...|+++|
T Consensus 94 Dilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~g~~~~g~~~y~~sk 164 (191)
T d1luaa1 94 HFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIG---GID-ATDKGKEYGGKRAFGALGIGGLKLKLHR 164 (191)
T ss_dssp SEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBT---TCC-TTCEEEEETTEEEECHHHHHHHHHHHHH
T ss_pred CeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHH---hhh-hccCcEEecceEEEeccCcCcHHHHHHH
Confidence 99999998642 35689999999999998887765442211 111 112222333222211 013446799999
Q ss_pred HHHHHHHH
Q psy612 226 RFQTVYAK 233 (1005)
Q Consensus 226 a~l~~la~ 233 (1005)
+++..|.+
T Consensus 165 ~a~~~l~~ 172 (191)
T d1luaa1 165 ACIAKLFE 172 (191)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHh
Confidence 88876653
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=99.29 E-value=2.2e-12 Score=112.29 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhh
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 410 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~ 410 (1005)
+.+.+.|+++|+++|++++++|+++.+|.+||+|||++++|...|+++||++|++.++|+++|+++|++||.++..
T Consensus 7 ~~i~~~l~~iv~~~l~~~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~~~ 82 (85)
T d1vkua_ 7 KKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLE 82 (85)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHHHh
Confidence 4577889999999999999999999999999999999999999999999999999999999999999999988764
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=99.28 E-value=1.4e-12 Score=115.66 Aligned_cols=76 Identities=11% Similarity=0.062 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhhhh
Q psy612 336 FIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 411 (1005)
Q Consensus 336 ~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~~~ 411 (1005)
.+...+++.+++.+++++++|..+.+|++||+|||++++|..+|+++||++|+++.+|+|||+++|++||..++..
T Consensus 8 ~l~~~lre~~~~~~~~~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~l~~ 83 (95)
T d1nq4a_ 8 DLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTG 83 (95)
T ss_dssp HHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHhCCChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHhccC
Confidence 4667788888888999999999999999999999999999999999999999999999999999999999887643
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.26 E-value=3.7e-12 Score=117.52 Aligned_cols=76 Identities=22% Similarity=0.279 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHhh
Q psy612 334 EKFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 409 (1005)
Q Consensus 334 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~~ 409 (1005)
.+.+...|+++|+++||+++++|+.+.+|+ +||+|||++++|...|+++||+.|+.+.+|+|+||++|++||.+..
T Consensus 5 ~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~ 81 (115)
T d1klpa_ 5 QEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHh
Confidence 345778899999999999999999999997 6999999999999999999999999999999999999999997654
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=99.20 E-value=3.7e-12 Score=109.49 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhCCCCc---ccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 339 NDIKNHICNILNTKKS---EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 339 ~~l~~~ia~~L~~~~~---~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+.|++++++.++.... +++.+.+|.+||+|||+++||.++|+++||++||++.+|+|||+++|++|+...
T Consensus 6 e~l~~il~e~~g~~~~~~~~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~ 78 (82)
T d1or5a_ 6 DDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 78 (82)
T ss_dssp HHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCcccccCCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhc
Confidence 4577888888876432 467889999999999999999999999999999999999999999999998654
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.15 E-value=6.3e-12 Score=106.46 Aligned_cols=65 Identities=26% Similarity=0.296 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhCC-CCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHH
Q psy612 339 NDIKNHICNILNT-KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 404 (1005)
Q Consensus 339 ~~l~~~ia~~L~~-~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~ 404 (1005)
+.|.+.|+++|++ ++++|+++++|++||+|||++++|+++|+++||++|+++++|+ +|+.+|++.
T Consensus 7 ~~l~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el 72 (76)
T d2pnga1 7 RDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEM 72 (76)
T ss_dssp CCGGGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHT
T ss_pred HHHHHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHHH-hhHHHHHHH
Confidence 3567889999999 5789999999999999999999999999999999999999885 999999875
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=2.3e-10 Score=126.97 Aligned_cols=167 Identities=19% Similarity=0.152 Sum_probs=113.6
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
|++|||||+|=||..++++|+++|..++.+.++... .+.+.........++.++.+|++|.+++++++...
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 789999999999999999999999877666554321 11222222233467899999999999999988764
Q ss_pred CCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy612 144 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 216 (1005)
Q Consensus 144 g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------- 216 (1005)
.+|.|||+|+...... +.++....+++|+.|+.+|.+++.. ..-.+..+||++||.+ ++|.+
T Consensus 78 -~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~----~~~~~~~r~i~~SS~~-vYG~~~~~~~~E 146 (357)
T d1db3a_ 78 -QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRF----LGLEKKTRFYQASTSE-LYGLVQEIPQKE 146 (357)
T ss_dssp -CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHH----TTCTTTCEEEEEEEGG-GGTTCCSSSBCT
T ss_pred -CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCCcEEEEEEchh-hhCCCCCCCcCC
Confidence 6899999999865211 1233456789999999999988643 1222344688888854 33321
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
....|+.+|.+.+.+++...+. ++ +.+.+..+.+
T Consensus 147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l------~~~ilR~~~v 186 (357)
T d1db3a_ 147 TTPFYPRSPYAVAKLYAYWITVNYRESYGM------YACNGILFNH 186 (357)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCE
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhCC------CEEEEEeccc
Confidence 2467999999999988876554 44 6667765433
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=99.14 E-value=4.1e-11 Score=102.61 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCchhhcC-CchHHHHHHHHHHHhhcCcccCccccc--cCCCHHHHHHHHHH
Q psy612 335 KFIENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIK 407 (1005)
Q Consensus 335 ~~~~~~l~~~ia~~L~~~~~~i~~~~~l~elG-~DSL~a~el~~~l~~~~g~~l~~~~lf--~~~Ti~~La~~l~~ 407 (1005)
+.++..+.++++++++.++.+|+++.+|+++| +|||++++|..+|+++||+++|+++++ +++|+++|++|+.+
T Consensus 3 e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~ 78 (80)
T d1dv5a_ 3 EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHH
Confidence 45788899999999999999999999999986 799999999999999999999999999 88999999999964
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=99.11 E-value=2.8e-11 Score=101.98 Aligned_cols=69 Identities=14% Similarity=0.259 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHH
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYF 405 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l 405 (1005)
+.+.+++++++.|++++++|+++.+|. +||+|||++++|...|+++||++++...+++++|+++|++|+
T Consensus 4 v~~~v~~iia~~l~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~i 73 (74)
T d1f80d_ 4 TLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYI 73 (74)
T ss_dssp HHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHC
T ss_pred HHHHHHHHHHHHHCcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHH
Confidence 567899999999999999999999997 699999999999999999999999999999999999999986
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.09 E-value=4.9e-11 Score=102.96 Aligned_cols=73 Identities=7% Similarity=0.146 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhCC--CCcccccCCchhhcCCchHHHHHHHHHHHhhcCcccCcccccc--CCCHHHHHHHHHHhhh
Q psy612 338 ENDIKNHICNILNT--KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIKNHN 410 (1005)
Q Consensus 338 ~~~l~~~ia~~L~~--~~~~i~~~~~l~elG~DSL~a~el~~~l~~~~g~~l~~~~lf~--~~Ti~~La~~l~~~~~ 410 (1005)
++.|++.+++++++ ++++|+++++|++||+|||++++|..+|+++||+++|...+|. +|||.+|++|+.+...
T Consensus 2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~~ 78 (83)
T d2jq4a1 2 NATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLILD 78 (83)
T ss_dssp HHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 45688899998664 7789999999999999999999999999999999999999996 5999999999977553
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.04 E-value=3.1e-09 Score=119.15 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=119.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEe--cCC--------------CchHHHHHHHHh-CCCcEEEEEecCCCHH
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILS--GRS--------------KLNSIIYKKLKK-FNNKAIYIQVDVSDKL 130 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~--~r~--------------~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~ 130 (1005)
|+.+|||||+|=||..++++|+++|..++++. .|+ ....+.....+. .+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 57899999999999999999999998776663 110 111222233322 2567899999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy612 131 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 210 (1005)
Q Consensus 131 ~v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia 210 (1005)
.+.++++.. .+|.|||.|+... ......+.+.....+.+|+.|+.++.+++... ....+++++||..
T Consensus 81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~------~~~~~~i~~ss~~ 147 (393)
T d1i24a_ 81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF------GEECHLVKLGTMG 147 (393)
T ss_dssp HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCEEEEECCGG
T ss_pred HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh------ccccceeeccccc
Confidence 999888764 6999999998754 33445566777889999999999999986432 2334566666654
Q ss_pred cccCC------------------------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 211 AILGD------------------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 211 ~~~g~------------------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
..... .....|+.+|.+.+.+++...++ ++ +.+.+.++.+-
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l------~~~~lR~~~v~ 213 (393)
T d1i24a_ 148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI------RATDLNQGVVY 213 (393)
T ss_dssp GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEE
T ss_pred cccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccce------eeeeccccccc
Confidence 33110 11245999999999988765443 44 67777665443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=1.4e-09 Score=119.59 Aligned_cols=147 Identities=18% Similarity=0.259 Sum_probs=105.7
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc---hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL---NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~---~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+|||||+|=||..+++.|+++|..++++.+-... .....+.+. ..++.++++|++|.+.+.++++.. ++|
T Consensus 3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d 75 (338)
T d1udca_ 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH-----AID 75 (338)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence 8999999999999999999999877666432211 112222232 346888999999999888887653 589
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.|||+|+... . .. +.++-...+++|+.|+.++.+++... +...||++||.+...+..
T Consensus 76 ~ViHlAa~~~-~-~~---~~~~~~~~~~~Nv~gt~nlL~~~~~~-------~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~ 143 (338)
T d1udca_ 76 TVIHFAGLKA-V-GE---SVQKPLEYYDNNVNGTLRLISAMRAA-------NVKNFIFSSSATVYGDQPKIPYVESFPTG 143 (338)
T ss_dssp EEEECCSCCC-H-HH---HHHCHHHHHHHHHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCSCCSSSBCTTSCCC
T ss_pred EEEECCCccc-h-hh---HHhCHHHHHHhHHHHHHHHHHHHHHh-------CCCEEEecCcceEEccccccccccccccC
Confidence 9999998643 1 11 22234578899999999999986432 456799999876553221
Q ss_pred -CChhhhHHHHHHHHHHHHHH
Q psy612 217 -GSCDYAMGNRFQTVYAKYLN 236 (1005)
Q Consensus 217 -g~~~Yaaana~l~~la~~~~ 236 (1005)
....|+.+|...+.+.....
T Consensus 144 ~p~~~Y~~sK~~~e~~~~~~~ 164 (338)
T d1udca_ 144 TPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CCSSHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHhhhhHHHHHHH
Confidence 35679999999998877443
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=4.2e-10 Score=95.40 Aligned_cols=72 Identities=25% Similarity=0.332 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCchh-hcCCchHHHHHHHHHHHhhcCcccCccccccCCCHHHHHHHHHHh
Q psy612 337 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 408 (1005)
Q Consensus 337 ~~~~l~~~ia~~L~~~~~~i~~~~~l~-elG~DSL~a~el~~~l~~~~g~~l~~~~lf~~~Ti~~La~~l~~~ 408 (1005)
+++.+++++++.+++++++|.++.+|. +||+|||+.++|...|+++||++++...+++.+|+++|++|+.++
T Consensus 3 I~~~v~~iia~~l~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~ 75 (77)
T d1t8ka_ 3 IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 75 (77)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHc
Confidence 567899999999999999999999996 699999999999999999999999999999999999999999765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.97 E-value=1.9e-09 Score=118.76 Aligned_cols=150 Identities=19% Similarity=0.199 Sum_probs=106.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHH--HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSII--YKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~--~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
|++|||||+|=||..++++|+++|..++++..-.. ..... ...+. ...+.++.+|++|.+.++.++... .
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----~ 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----K 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence 78999999999999999999999987666532221 11221 12222 345778899999999998887643 6
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 215 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~---------- 215 (1005)
+|.|||+|+... . .... +.-.....+|+.|+.++.+++.. .+...||++||...+-..
T Consensus 75 ~d~VihlAa~~~-~-~~~~---~~~~~~~~~N~~~t~~ll~~~~~-------~~i~~~i~~SS~~vyg~~~~~~~~~~~~ 142 (347)
T d1z45a2 75 IDSVIHFAGLKA-V-GEST---QIPLRYYHNNILGTVVLLELMQQ-------YNVSKFVFSSSATVYGDATRFPNMIPIP 142 (347)
T ss_dssp CCEEEECCSCCC-H-HHHH---HSHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred CCEEEEcccccc-c-cccc---cCcccccccchhhhHHHHHHHHh-------cccceEEeecceeeecCcccCCCCCccc
Confidence 999999998754 1 1222 23345778999999999999643 245679999996644211
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHh
Q psy612 216 -----FGSCDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 216 -----~g~~~Yaaana~l~~la~~~~~ 237 (1005)
.....|+.+|.+.+.+.+...+
T Consensus 143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~ 169 (347)
T d1z45a2 143 EECPLGPTNPYGHTKYAIENILNDLYN 169 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCChhHhHHHHHHHHHHHHHH
Confidence 1235699999999998877654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.95 E-value=3.9e-09 Score=115.06 Aligned_cols=151 Identities=19% Similarity=0.238 Sum_probs=107.7
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCC-CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
.+|||||+|=||..+++.|+++|..++++...+ ....+....+.. ..++.++.+|++|.+.+.++++.. .+|.
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~ 75 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPDS 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence 479999999999999999999998776653222 122223333433 346889999999999998888765 5899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 216 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------------ 216 (1005)
|||+|+... .. ...++-...+++|+.|+.+|.+++.. .+...+|++||.+...+.+
T Consensus 76 Vih~aa~~~-~~----~~~~~~~~~~~~Nv~gt~nll~~~~~-------~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~ 143 (338)
T d1orra_ 76 CFHLAGQVA-MT----TSIDNPCMDFEINVGGTLNLLEAVRQ-------YNSNCNIIYSSTNKVYGDLEQYKYNETETRY 143 (338)
T ss_dssp EEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHH-------HCTTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred EEeeccccc-cc----ccccChHHHHHHHHHHHHHHHHhhhc-------ccccccccccccccccccccccccccccccc
Confidence 999998754 21 12234467889999999999988543 2445567777766554432
Q ss_pred ----------------CChhhhHHHHHHHHHHHHHHhc
Q psy612 217 ----------------GSCDYAMGNRFQTVYAKYLNNK 238 (1005)
Q Consensus 217 ----------------g~~~Yaaana~l~~la~~~~~~ 238 (1005)
....|+.+|...+.+.......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~ 181 (338)
T d1orra_ 144 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181 (338)
T ss_dssp EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcccCCccccccccccccchhhhhhhhhhhc
Confidence 2467899999888877665443
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.92 E-value=2.8e-09 Score=117.26 Aligned_cols=169 Identities=17% Similarity=0.082 Sum_probs=112.9
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH--hCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK--KFNNKAIYIQVDVSDKLKMISEINSII 140 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~--~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 140 (1005)
..+.+||++|||||+|=||..++++|.++|..++.++++......+..... ........+..|++|.+++.+++
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---- 81 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI---- 81 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT----
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc----
Confidence 456789999999999999999999999999876665544322222222211 12334455778999987665443
Q ss_pred hhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC---
Q psy612 141 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--- 217 (1005)
Q Consensus 141 ~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g--- 217 (1005)
-.+|.|+|+|+... . ..+ ....+.+|+.|+.++.+++. +......||++||+.+..+...
T Consensus 82 ---~~~~~v~~~a~~~~-~----~~~---~~~~~~~nv~gt~~ll~~~~------~~~~v~~~i~~SS~~~~~~~~~~~~ 144 (342)
T d1y1pa1 82 ---KGAAGVAHIASVVS-F----SNK---YDEVVTPAIGGTLNALRAAA------ATPSVKRFVLTSSTVSALIPKPNVE 144 (342)
T ss_dssp ---TTCSEEEECCCCCS-C----CSC---HHHHHHHHHHHHHHHHHHHH------TCTTCCEEEEECCGGGTCCCCTTCC
T ss_pred ---ccchhhhhhccccc-c----ccc---ccccccchhhhHHHHHHhhh------cccccccccccccceeeccCCCCCC
Confidence 35899999998654 1 122 23457789999999998853 2335678999999865443211
Q ss_pred ----------------------------ChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCc
Q psy612 218 ----------------------------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 255 (1005)
Q Consensus 218 ----------------------------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 255 (1005)
...|+.+|...+.++....+.. +.+.++++|.++.
T Consensus 145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~~i~p~~ 207 (342)
T d1y1pa1 145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN---KPHFTLNAVLPNY 207 (342)
T ss_dssp CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH---CCSSEEEEEEESE
T ss_pred CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhc---ccccccceecccc
Confidence 1359999999998887655432 2334666665443
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=8.1e-09 Score=111.79 Aligned_cols=147 Identities=15% Similarity=0.083 Sum_probs=106.5
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.|.+|||||+|-||..++++|+++|..++++..+++ +|+++.+.+.++++.- .+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~~-----~~d 56 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFASE-----RID 56 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhhc-----CCC
Confidence 357999999999999999999999987766554432 5899999888877542 689
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.|||+|+... ..... .......+++|+.|+.++.+++. .....+||++||.+.+-+..
T Consensus 57 ~v~~~a~~~~-~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~-------~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~ 125 (315)
T d1e6ua_ 57 QVYLAAAKVG-GIVAN---NTYPADFIYQNMMIESNIIHAAH-------QNDVNKLLFLGSSCIYPKLAKQPMAESELLQ 125 (315)
T ss_dssp EEEECCCCCC-CHHHH---HHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred EEEEcchhcc-ccccc---hhhHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEECCceEcCCCCCCCccCCcccc
Confidence 9999997754 22222 23334467789999999998853 23566799999977543211
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
.+..|+.+|.+.+.+++....+ ++ +++.+..+.+
T Consensus 126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl------~~~ilR~~~v 165 (315)
T d1e6ua_ 126 GTLEPTNEPYAIAKIAGIKLCESYNRQYGR------DYRSVMPTNL 165 (315)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEeeccE
Confidence 1346999999999998866544 44 6777765433
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.85 E-value=6.9e-09 Score=115.01 Aligned_cols=172 Identities=17% Similarity=0.149 Sum_probs=117.0
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~--~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.+|||||+|=||..++++|+++|..+++.+.+...... ...+.. ....+.++.+|++|...+.++++.. .+|
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d 75 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPD 75 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence 47999999999999999999999987776654321110 011111 1347889999999999998887653 699
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--hcCCCcEEEEecCcccccCC----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL--QKNKLDFVCYFSSSSAILGD---------- 215 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~--~~~~~~~iV~~SSia~~~g~---------- 215 (1005)
.|||+|+... .. . +.++-..++++|+.|+.++.+++...-... ......+||+.||.+..-..
T Consensus 76 ~VihlAa~~~-~~-~---~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (361)
T d1kewa_ 76 AVMHLAAESH-VD-R---SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp EEEECCSCCC-HH-H---HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred EEEECccccc-hh-h---HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence 9999998654 21 1 123335688999999999999976542100 00123469999886643111
Q ss_pred -----------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 216 -----------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 -----------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
...+.|+.+|...+.++...... ++ +++++..+.+-+
T Consensus 151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i------~~~~lR~~~vyG 199 (361)
T d1kewa_ 151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGL------PTIVTNCSNNYG 199 (361)
T ss_dssp CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEES
T ss_pred CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEecCceEC
Confidence 11345999999999998876544 33 777777665543
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=3.8e-08 Score=109.36 Aligned_cols=255 Identities=16% Similarity=0.168 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCccc--c-ccc
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMA--I-NTA 626 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~--v-~ta 626 (1005)
...|..+++.+||++||+++++++ -++++++. ++.. + ..+..|...||++..... + ..|
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~~--------P-----~~a~~v~~~LGl~~~~~~~~~~~~g 153 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIG----LLVLATST-GFIA--------P-----GVDVAIVKELGLSPSISRVVVNFMG 153 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESS-CCCS--------S-----CHHHHHHHHHTCCTTCEEEEEESCG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccC-CCCC--------c-----hHHHHHHhhhccCCceeEeeccccC
Confidence 346899999999999999887654 33333332 2221 1 256789999999875443 3 358
Q ss_pred chhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccchhh
Q psy612 627 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 706 (1005)
Q Consensus 627 CsSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~A~ 706 (1005)
|++++.||..|...|++|..+-+||.+++.... .+-..+. ++.....+.+|+|++++||++-....
T Consensus 154 C~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~----------~~~~~d~----~~~~~~~~lfGDGAaA~ll~~~~~~~ 219 (372)
T d1teda_ 154 CAAAMNALGTATNYVRAHPAMKALVVCIELCSV----------NAVFADD----INDVVIHSLFGDGCAALVIGASQVQE 219 (372)
T ss_dssp GGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG----------GCCCCSS----HHHHHHHHHBCEEEEEEEEEEECTTS
T ss_pred ccHHHHHHHHHHHHHhcCCCccceeeeehhhcc----------cccCCCc----chhhhhhhhhcccceeEEeccCCccc
Confidence 999999999999999999999999999986321 0000000 00111234689999999998654432
Q ss_pred cCCCceEEEEEEeeec-cCCC---------CCCCC---CCC-----HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy612 707 SDGDPIHAIIRGSGIN-YDGK---------TNGIT---APN-----GISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 768 (1005)
Q Consensus 707 ~~g~~I~avI~g~~~~-~dG~---------~~~~~---~p~-----~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~ 768 (1005)
.. ...+..+.+.... ..+. ..++. .+. .....++++++|+++|++++||+|+-.|-.+..+
T Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i 298 (372)
T d1teda_ 220 KL-EPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI 298 (372)
T ss_dssp CC-CTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH
T ss_pred cc-CCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHH
Confidence 22 2223334443221 1100 00110 111 3456788999999999999999999999776543
Q ss_pred CCHHHHHHHHHHhccCCCCCCceeEe-ccCCCcCchhhchhhHHHHHHHHHhhcCCCCCCCCCCCcccccccCCCCeeec
Q psy612 769 GDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 847 (1005)
Q Consensus 769 gD~~E~~al~~~~~~~~~~~~~~~ig-svK~~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~ 847 (1005)
++.+.+.++-... + +... .+-...||+-+|+=...|-. .++++.+.+
T Consensus 299 -----~~~i~~~Lgl~~e--k-~~~s~~~l~~~GN~~sasip~~L~~---~l~~g~~~~--------------------- 346 (372)
T d1teda_ 299 -----IEQSVRSLGISAE--L-AAQSWDVLARFGNMLSVSLIFVLET---MVQQAESAK--------------------- 346 (372)
T ss_dssp -----HHHHHHHHTCCGG--G-GHHHHHHHHHHCBCTHHHHHHHHHH---HHHSCSSSS---------------------
T ss_pred -----HHHHHHHcCCCHH--H-hhhhHHHHhccCCcHHHHHHHHHHH---HHHhCCCCC---------------------
Confidence 3344455542211 1 1110 11234588877654332222 333322111
Q ss_pred cccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 848 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 848 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
...+..+.+||.|=+-..++||
T Consensus 347 -----------g~d~vll~~fG~G~s~~~~ll~ 368 (372)
T d1teda_ 347 -----------AISTGVAFAFGPGVTVEGMLFD 368 (372)
T ss_dssp -----------SSEEEEEEEEETTTEEEEEEEE
T ss_pred -----------CCCEEEEEEEcHHHhHHHHhhe
Confidence 1135567899987677777776
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=1.9e-08 Score=101.97 Aligned_cols=186 Identities=14% Similarity=0.058 Sum_probs=112.7
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.|.++||||+|.||.++++.|+++|..+.++.++....+. . ....+.++.+|++|.+++.++++ ..|
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~----~--~~~~~~~~~gD~~d~~~l~~al~-------~~d 69 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----E--GPRPAHVVVGDVLQAADVDKTVA-------GQD 69 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----S--SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc----c--cccccccccccccchhhHHHHhc-------CCC
Confidence 4679999999999999999999999866666544332111 1 12346789999999988776653 579
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC----hhhhH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS----CDYAM 223 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~----~~Yaa 223 (1005)
.|||++|... ..... ..+..++.++.+++ ++....+||++||.......... ..|..
T Consensus 70 ~vi~~~g~~~-~~~~~-----------~~~~~~~~~l~~aa-------~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~ 130 (205)
T d1hdoa_ 70 AVIVLLGTRN-DLSPT-----------TVMSEGARNIVAAM-------KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTD 130 (205)
T ss_dssp EEEECCCCTT-CCSCC-----------CHHHHHHHHHHHHH-------HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred EEEEEeccCC-chhhh-----------hhhHHHHHHHHHHH-------HhcCCCeEEEEeeeeccCCCccccccccccch
Confidence 9999998754 22111 22345666666663 33356789999987654332222 23444
Q ss_pred HHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccchhhhHHHHhcCCCCCCHHHHHHHHHHHHhcc
Q psy612 224 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 297 (1005)
Q Consensus 224 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~~~~~~l~~~l~~~ 297 (1005)
.+...+ +.++..++ +++.|.++.+.+........... -.......++.++.++.+..++..+
T Consensus 131 ~~~~~e---~~l~~~~~------~~tiirp~~~~~~~~~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~~~ 192 (205)
T d1hdoa_ 131 DHIRMH---KVLRESGL------KYVAVMPPHIGDQPLTGAYTVTL---DGRGPSRVISKHDLGHFMLRCLTTD 192 (205)
T ss_dssp HHHHHH---HHHHHTCS------EEEEECCSEEECCCCCSCCEEES---SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHH---HHHHhcCC------ceEEEecceecCCCCcccEEEee---CCCCCCCcCCHHHHHHHHHHHhCCC
Confidence 444433 33445555 77788776654322111000000 0112234578888888888777654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.80 E-value=1.7e-08 Score=109.40 Aligned_cols=163 Identities=15% Similarity=0.067 Sum_probs=111.0
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
|++|||||+|-||..++++|.++|..++.+.++.... ....+.+. ...++.++.+|++|...+.+.+... ..+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~ 74 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ 74 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence 6899999999999999999999998877676654321 12222222 1246899999999999888877664 567
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 216 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----------- 216 (1005)
.++|+|+... . .... +.....+..|+.|+.++.+++... ....+|+++|| ....|..
T Consensus 75 ~~~~~a~~~~-~-~~~~---~~~~~~~~~n~~g~~~~l~~~~~~------~~~~~~i~~Ss-~~~~~~~~~~~~~E~~~~ 142 (321)
T d1rpna_ 75 EVYNLAAQSF-V-GASW---NQPVTTGVVDGLGVTHLLEAIRQF------SPETRFYQAST-SEMFGLIQAERQDENTPF 142 (321)
T ss_dssp EEEECCSCCC-H-HHHT---TSHHHHHHHHTHHHHHHHHHHHHH------CTTSEEEEEEE-GGGGCSCSSSSBCTTSCC
T ss_pred cccccccccc-c-cccc---cchHHHHhhhhhchHHHHHHHHHh------CCCcccccccc-hhhcCcccCCCCCCCCCc
Confidence 8888887654 2 1111 224567889999999999886432 22344555555 4444322
Q ss_pred -CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCc
Q psy612 217 -GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPL 255 (1005)
Q Consensus 217 -g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~ 255 (1005)
.+..|+.+|.+.+.++...+.. ++ +.+.+..+.
T Consensus 143 ~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lr~~~ 177 (321)
T d1rpna_ 143 YPRSPYGVAKLYGHWITVNYRESFGL------HASSGILFN 177 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECC
T ss_pred cccChhHHHHHHHHHHHHHHHhhcCC------cEEEEEEec
Confidence 3478999999999998865543 33 555555443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=4e-08 Score=107.61 Aligned_cols=165 Identities=16% Similarity=0.125 Sum_probs=111.0
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
|++|||||+|=||..++++|.++|..++.+.++... .+.+..... .....+.++.+|++|.+.+.+++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence 456999999999999999999999987777665421 111111111 12346899999999999998888664
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 216 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------ 216 (1005)
.++.++|+|+... ... ..+.....+++|+.|+.++.+++..+ ...+..+||++||.+ ++|.+
T Consensus 79 --~~~~v~~~~a~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~~~~i~~SS~~-vyg~~~~~~~~ 146 (347)
T d1t2aa_ 79 --KPTEIYNLGAQSH-VKI----SFDLAEYTADVDGVGTLRLLDAVKTC----GLINSVKFYQASTSE-LYGKVQEIPQK 146 (347)
T ss_dssp --CCSEEEECCSCCC-HHH----HHHSHHHHHHHHTHHHHHHHHHHHHT----TCTTTCEEEEEEEGG-GTCSCSSSSBC
T ss_pred --ccceeeeeeeccc-cch----hhccchhhhhhHHHHHHHHHHHHHHc----CCCCCcEEEEecchh-eecCCCCCCCC
Confidence 5788899887654 211 22333456789999999999885432 222345788888864 34421
Q ss_pred ------CChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCC
Q psy612 217 ------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWP 254 (1005)
Q Consensus 217 ------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg 254 (1005)
....|+.+|.+.+.++....+ .++ +++.+..+
T Consensus 147 E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~------~~~ilr~~ 185 (347)
T d1t2aa_ 147 ETTPFYPRSPYGAAKLYAYWIVVNFREAYNL------FAVNGILF 185 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEec
Confidence 245799999999998887543 344 66666543
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.79 E-value=4.9e-08 Score=106.88 Aligned_cols=168 Identities=18% Similarity=0.155 Sum_probs=116.6
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~-----~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
.-|++|||||+|-||..++++|.++|..++.+...+.........++. ....+.++.+|+.|.......
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~------ 88 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA------ 88 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH------
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc------
Confidence 457999999999999999999999999877766544322222222221 124688999999997754422
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 216 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~----- 216 (1005)
....+.++|.+.... . ..+.++....+++|+.|+.+|.+++.. .+...||++||.+.+-..+
T Consensus 89 -~~~~~~v~~~~a~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~-------~~~~~~i~~SS~~vyg~~~~~~~~ 155 (341)
T d1sb8a_ 89 -CAGVDYVLHQAALGS-V----PRSINDPITSNATNIDGFLNMLIAARD-------AKVQSFTYAASSSTYGDHPGLPKV 155 (341)
T ss_dssp -HTTCSEEEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred -ccccccccccccccc-c----cccccCccchhheeehhHHHHHHHHHh-------cCCceEEEcccceeeCCCCCCCcc
Confidence 236788899886543 1 113456677899999999999998642 3556899999977542221
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccC
Q psy612 217 ------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 ------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 258 (1005)
..+.|+.+|...+.+++...+.. +.+++.+..+.+-+
T Consensus 156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~ilR~~~v~G 198 (341)
T d1sb8a_ 156 EDTIGKPLSPYAVTKYVNELYADVFSRCY-----GFSTIGLRYFNVFG 198 (341)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCCEEEEECCEEC
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHh-----CCCeEEEEeceeec
Confidence 23789999999999988766542 12666776655543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=5.4e-08 Score=106.70 Aligned_cols=152 Identities=14% Similarity=0.169 Sum_probs=106.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecC-----C-CchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-----S-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r-----~-~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
|.+|||||+|=||.+++++|+++|..++++.+. + ....+..+.+.. ...++.++.+|++|.+.+.+++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 678999999999999999999999888777431 1 111222222222 245788999999999998877754
Q ss_pred hcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC------
Q psy612 142 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------ 215 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------ 215 (1005)
..++.++|+|+... . .. +.++-...+++|+.|+.++.+++. ..+...|+++||.......
T Consensus 80 --~~~~~i~h~Aa~~~-~-~~---~~~~p~~~~~~Nv~gt~~l~~~~~-------~~~v~~~i~~ss~~~~~~~~~~~~~ 145 (346)
T d1ek6a_ 80 --YSFMAVIHFAGLKA-V-GE---SVQKPLDYYRVNLTGTIQLLEIMK-------AHGVKNLVFSSSATVYGNPQYLPLD 145 (346)
T ss_dssp --CCEEEEEECCSCCC-H-HH---HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred --cccccccccccccC-c-Hh---hHhCHHHHHHhhhcccccccchhh-------hcCcccccccccceeeecccccccc
Confidence 36889999998754 2 11 122345678999999999998843 3356678888776543221
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHh
Q psy612 216 ------FGSCDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 216 ------~g~~~Yaaana~l~~la~~~~~ 237 (1005)
.....|+.+|.+.+..++...+
T Consensus 146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~ 173 (346)
T d1ek6a_ 146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173 (346)
T ss_dssp TTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHH
Confidence 1234699999999887775443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.74 E-value=6.6e-08 Score=105.41 Aligned_cols=169 Identities=18% Similarity=0.117 Sum_probs=111.7
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-----hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-----~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
|++|||||+|=||..++++|+++|..++.+.++... ...+...... ....+.++.+|+++.+.+.+.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence 789999999999999999999999887776654321 1111111111 1346889999999999998888753
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 215 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------- 215 (1005)
.+|.|||+|+... .. ...+.-...+..|+.|+.++..++..... .......++..||.. ..+.
T Consensus 79 --~~D~Vih~Aa~~~-~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~~ss~~-~~~~~~~~~~E 148 (339)
T d1n7ha_ 79 --KPDEVYNLAAQSH-VA----VSFEIPDYTADVVATGALRLLEAVRSHTI--DSGRTVKYYQAGSSE-MFGSTPPPQSE 148 (339)
T ss_dssp --CCSEEEECCSCCC-HH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHH--HHCCCCEEEEEEEGG-GGTTSCSSBCT
T ss_pred --ccchhhhcccccc-cc----ccccCccccccccccccchhhhhhhhccc--ccccceeeeecccce-ecccCCCCCCC
Confidence 7999999998755 21 12234456788999999998888654321 112223344444433 2222
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 216 ----FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 216 ----~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
.....|+.+|.+.+.++....+. ++ +++.+..+.+
T Consensus 149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilR~~~v 188 (339)
T d1n7ha_ 149 TTPFHPRSPYAASKCAAHWYTVNYREAYGL------FACNGILFNH 188 (339)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCE
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHhCC------CEEEEEEccc
Confidence 12468999999999988765544 44 7777766444
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.73 E-value=3.4e-08 Score=108.62 Aligned_cols=155 Identities=19% Similarity=0.182 Sum_probs=106.1
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
|-++|.+|||||+|-||..+++.|+++|..+.++.++........+.. .....+.++.+|++|++.+.+++...
T Consensus 5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~----- 78 (356)
T d1rkxa_ 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF----- 78 (356)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred hhCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----
Confidence 457899999999999999999999999987666655444333332222 12235788999999999988877654
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------- 216 (1005)
.+|.|+|+|+... . ..+.+.....+.+|+.|+.++.+++... ....++++.||. ...+..
T Consensus 79 ~~~~v~~~aa~~~-~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~------~~~~~~~~~s~~-~~~~~~~~~~~~~~ 146 (356)
T d1rkxa_ 79 QPEIVFHMAAQPL-V----RLSYSEPVETYSTNVMGTVYLLEAIRHV------GGVKAVVNITSD-KCYDNKEWIWGYRE 146 (356)
T ss_dssp CCSEEEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------CCCCEEEEECCG-GGBCCCCSSSCBCT
T ss_pred hhhhhhhhhcccc-c----cccccCCccccccccccchhhhhhhhcc------cccccccccccc-cccccccccccccc
Confidence 6899999998654 1 1123445668889999999999886432 223344444443 333221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHh
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNN 237 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~ 237 (1005)
....|+..|...+.+....+.
T Consensus 147 ~~~~~p~~~y~~~k~~~e~~~~~~~~ 172 (356)
T d1rkxa_ 147 NEAMGGYDPYSNSKGCAELVTSSYRN 172 (356)
T ss_dssp TSCBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccccccccchhhhhHHhh
Confidence 234588888888777665443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.68 E-value=1.8e-07 Score=104.12 Aligned_cols=169 Identities=17% Similarity=0.225 Sum_probs=113.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEec---CC-------CchHHHHHHHHhC--------CCcEEEEEecCCCHHH
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSG---RS-------KLNSIIYKKLKKF--------NNKAIYIQVDVSDKLK 131 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~---r~-------~~~~~~~~~l~~~--------g~~v~~~~~Dvtd~~~ 131 (1005)
.+|||||+|=||..++++|++++...|+.+. ++ ...+.....+... ...+.++.+|++|.+.
T Consensus 4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~ 83 (383)
T d1gy8a_ 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (383)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence 5899999999999999999975444444432 11 2223333333321 2357889999999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy612 132 MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 211 (1005)
Q Consensus 132 v~~~~~~i~~~~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~ 211 (1005)
+.++++. ..++|.|||+|+... ... ..+.....+.+|+.|+.++.+++. ......++++||...
T Consensus 84 l~~~~~~----~~~~d~ViH~Aa~~~-~~~----~~~~~~~~~~~N~~~t~~~l~~~~-------~~~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 84 LNGVFTR----HGPIDAVVHMCAFLA-VGE----SVRDPLKYYDNNVVGILRLLQAML-------LHKCDKIIFSSSAAI 147 (383)
T ss_dssp HHHHHHH----SCCCCEEEECCCCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGG
T ss_pred hhhhhhc----cceeehhhccccccc-ccc----cccccccccccccccccccchhhh-------ccCCccccccccccc
Confidence 8877754 468999999998754 221 123345677889999999998853 234556776666554
Q ss_pred ccCC------------------CCChhhhHHHHHHHHHHHHHHh-ccccccCCceEEEEeCCcccCcc
Q psy612 212 ILGD------------------FGSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 260 (1005)
Q Consensus 212 ~~g~------------------~g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 260 (1005)
.... .....|+.+|...+.+++.... .++ +++++..+.+-+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl------~~~~lR~~~vyG~~ 209 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGI------KGICLRYFNACGAH 209 (383)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEECCC
T ss_pred ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCC------CEEEEecceeeccC
Confidence 3211 1246799999999999987654 344 77777766554433
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=1.1e-07 Score=103.97 Aligned_cols=159 Identities=14% Similarity=0.084 Sum_probs=105.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecC-CCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGR-SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r-~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
.+|||||+|-||..++++|+++|...|+.+.+ ++.... +. ...++.++.+|+++.+++.+.+ .+ .+|.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~----~~-~~~~~~~i~~Di~~~~~~~~~~---~~---~~d~ 70 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL-NHPHFHFVEGDISIHSEWIEYH---VK---KCDV 70 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GT-TCTTEEEEECCTTTCSHHHHHH---HH---HCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh----hc-cCCCeEEEECccCChHHHHHHH---Hh---CCCc
Confidence 38999999999999999999999655554433 322211 11 1357899999999876654432 22 4899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-----------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 217 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g----------- 217 (1005)
|||+|+... ... ..+.-...+..|+.|+.++.+++.. ... .++++||.....+...
T Consensus 71 Vih~a~~~~-~~~----~~~~~~~~~~~nv~gt~~ll~~~~~-------~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~ 137 (342)
T d2blla1 71 VLPLVAIAT-PIE----YTRNPLRVFELDFEENLRIIRYCVK-------YRK-RIIFPSTSEVYGMCSDKYFDEDHSNLI 137 (342)
T ss_dssp EEECBCCCC-HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-------TTC-EEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred ccccccccc-ccc----cccCCcccccccccccccccccccc-------ccc-ccccccccccccccccccccccccccc
Confidence 999999765 211 1233456788999999999998532 222 3455566543332211
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 218 -------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 218 -------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
...|+.+|...+.++....+. ++ +++.+..+.+..
T Consensus 138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~i~r~~~~~g 180 (342)
T d2blla1 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL------QFTLFRPFNWMG 180 (342)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECSEEC
T ss_pred ccccCCCcchhhhcccchhhhhhhhhcccCc------eeEEeecccccc
Confidence 256999999999988766544 44 666666665543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.62 E-value=6.4e-08 Score=99.37 Aligned_cols=202 Identities=15% Similarity=0.040 Sum_probs=119.9
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcE-EEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTN-LILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~-vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
-+++|||||+|.||+.+++.|+++|..+ ++...|++. ........+.++.+|+++.+.+.+++ ..+
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~ 69 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ------GKEKIGGEADVFIGDITDADSINPAF-------QGI 69 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH------HHHHTTCCTTEEECCTTSHHHHHHHH-------TTC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH------HHHhccCCcEEEEeeecccccccccc-------ccc
Confidence 3689999999999999999999999764 444556542 12233456778899999998877665 258
Q ss_pred cEEEEcCcccCccch--------hccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCC
Q psy612 147 DGVLHIAGISGLTSN--------ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 218 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~--------~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~ 218 (1005)
|.|||+|+....... ........+.....+|+.|+.++....... ..+.+...|+..........
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~ 142 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-------GVKHIVVVGSMGGTNPDHPL 142 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-------TCSEEEEEEETTTTCTTCGG
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-------cccccccccccccCCCCccc
Confidence 999999986531110 111122334456677888988887764332 45667777776654433322
Q ss_pred hh-----hhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcccCcccccccc-hhhhHHHHhcCCCCCCHHHHHHHHHH
Q psy612 219 CD-----YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSSKQKVLHENDGLKLFEQ 292 (1005)
Q Consensus 219 ~~-----Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~g~~~l~~~~~~~~l~~ 292 (1005)
.. |...+.... .+....+. +++.+.++.+-+.+...... ..........+...+..++.++++..
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~~~~~------~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~ 213 (252)
T d2q46a1 143 NKLGNGNILVWKRKAE---QYLADSGT------PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQ 213 (252)
T ss_dssp GGGGGCCHHHHHHHHH---HHHHHSSS------CEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHH
T ss_pred ccccccchhhhhhhhh---hhhhcccc------cceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHH
Confidence 22 222222222 22333333 67777766554432211100 00001122234456788899998888
Q ss_pred HHhccc
Q psy612 293 LLIQDK 298 (1005)
Q Consensus 293 ~l~~~~ 298 (1005)
+|..+.
T Consensus 214 ~l~~~~ 219 (252)
T d2q46a1 214 ALLFEE 219 (252)
T ss_dssp HTTCGG
T ss_pred HhCCcc
Confidence 886553
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.59 E-value=9.5e-08 Score=105.44 Aligned_cols=163 Identities=12% Similarity=0.020 Sum_probs=112.4
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
+.++..+|||||+|=||..++++|.++|..++++..++.... ...-....+..+|+.+.+.+.+++ .
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~-------~ 78 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT-------E 78 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH-------T
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHh-------h
Confidence 345667999999999999999999999987777655433210 001123457778999987765544 2
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------- 215 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~--------- 215 (1005)
.+|.|||+|+... ...... +.....+.+|+.|+.++..++. .....+||++||....-..
T Consensus 79 ~~d~Vih~a~~~~-~~~~~~---~~~~~~~~~n~~gt~~ll~~~~-------~~~vk~~i~~SS~~~~~~~~~~~~~~~~ 147 (363)
T d2c5aa1 79 GVDHVFNLAADMG-GMGFIQ---SNHSVIMYNNTMISFNMIEAAR-------INGIKRFFYASSACIYPEFKQLETTNVS 147 (363)
T ss_dssp TCSEEEECCCCCC-CHHHHT---TCHHHHHHHHHHHHHHHHHHHH-------HTTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred cCCeEeecccccc-cccccc---cccccccccccchhhHHHHhHH-------hhCccccccccccccccccccccccccc
Confidence 5899999998765 322222 2345678899999999998853 3356789999997654211
Q ss_pred ---------CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCccc
Q psy612 216 ---------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 257 (1005)
Q Consensus 216 ---------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 257 (1005)
.....|+.+|...+.+++...+. ++ +++.+..+..-
T Consensus 148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl------~~~ilR~~~vy 193 (363)
T d2c5aa1 148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI------ECRIGRFHNIY 193 (363)
T ss_dssp ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCEE
T ss_pred cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEeeeEe
Confidence 11457999999999998876554 44 66766655443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=1.8e-07 Score=96.45 Aligned_cols=137 Identities=13% Similarity=0.023 Sum_probs=93.5
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++++|||||+|-||..+++.|.++|. ..|++..|++..... .....+....+|+.+.+++ .+.+..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----~~~~~i~~~~~D~~~~~~~-------~~~~~~ 80 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----EAYKNVNQEVVDFEKLDDY-------ASAFQG 80 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----GGGGGCEEEECCGGGGGGG-------GGGGSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----cccceeeeeeecccccccc-------cccccc
Confidence 568999999999999999999999986 355555554321100 1123456666788775433 344557
Q ss_pred ccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHH
Q psy612 146 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 225 (1005)
Q Consensus 146 idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaan 225 (1005)
.|.+||++|... ..........+++.++.++.+++. ..+..+||++||..... .....|+.+|
T Consensus 81 ~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~-------~~~v~~fi~~Ss~~~~~--~~~~~Y~~~K 143 (232)
T d2bkaa1 81 HDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK-------AGGCKHFNLLSSKGADK--SSNFLYLQVK 143 (232)
T ss_dssp CSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH-------HTTCCEEEEECCTTCCT--TCSSHHHHHH
T ss_pred cccccccccccc--------cccchhhhhhhcccccceeeeccc-------ccCccccccCCcccccc--CccchhHHHH
Confidence 999999998643 122334556778999999888853 34677899999876543 2345699998
Q ss_pred HHHHHHH
Q psy612 226 RFQTVYA 232 (1005)
Q Consensus 226 a~l~~la 232 (1005)
...+...
T Consensus 144 ~~~E~~l 150 (232)
T d2bkaa1 144 GEVEAKV 150 (232)
T ss_dssp HHHHHHH
T ss_pred HHhhhcc
Confidence 8776543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=1.5e-07 Score=101.61 Aligned_cols=157 Identities=17% Similarity=0.112 Sum_probs=103.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|.+|||||+|=||..+++.|.++|..++++........+..... ....++.+...|+.+. .+..+|.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~~~~d~ 68 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LYIEVDQ 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HHcCCCE
Confidence 67999999999999999999999988776654222111111111 1123455555565432 2346999
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-------------
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------- 215 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~------------- 215 (1005)
|||+|+... ... ... +....+++|+.|+.+|.+++... . -.+|++||.+.. |.
T Consensus 69 VihlAa~~~-~~~-~~~---~~~~~~~~Nv~g~~~ll~~~~~~-------~-~k~I~~SS~~vy-~~~~~~~~~e~~~~~ 134 (312)
T d2b69a1 69 IYHLASPAS-PPN-YMY---NPIKTLKTNTIGTLNMLGLAKRV-------G-ARLLLASTSEVY-GDPEVHPQSEDYWGH 134 (312)
T ss_dssp EEECCSCCS-HHH-HTT---CHHHHHHHHHHHHHHHHHHHHHH-------T-CEEEEEEEGGGG-BSCSSSSBCTTCCCB
T ss_pred EEECcccCC-chh-HHh---CHHHHHHHHHHHHHHHHHHHHHc-------C-CcEEEEEChhee-cCCCCCCCCccccCC
Confidence 999998754 221 112 23467889999999999885431 2 358889886443 22
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 216 ----FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 216 ----~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
.....|+.+|.+.+.+++...+. ++ +++.+.++..-+
T Consensus 135 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lR~~~vyG 176 (312)
T d2b69a1 135 VNPIGPRACYDEGKRVAETMCYAYMKQEGV------EVRVARIFNTFG 176 (312)
T ss_dssp CCSSSTTHHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCEEC
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHhCC------cEEEEEeeeEEC
Confidence 12467999999999999876544 44 677777665544
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.51 E-value=3.1e-07 Score=100.55 Aligned_cols=160 Identities=18% Similarity=0.150 Sum_probs=105.4
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecC-CC--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-SK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r-~~--~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+.+|||||+|=||..++++|.++|..+.++... .. ........ -.+.++.++.+|++|.+.+..++ -
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~-------~ 72 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLA-------A 72 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHH-------T
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHH-------h
Confidence 4679999999999999999999999764333221 11 00111111 12457899999999998887664 2
Q ss_pred CccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy612 145 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 216 (1005)
Q Consensus 145 ~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-------- 216 (1005)
..+.|+|.|+... .... .++....+++|+.|+.++..++... . ..+|++||.+.+ |..
T Consensus 73 ~~~~v~~~a~~~~-~~~~----~~~~~~~~~~N~~g~~nll~~~~~~-------~-~k~i~~ss~~vy-g~~~~~~~~~~ 138 (346)
T d1oc2a_ 73 KADAIVHYAAESH-NDNS----LNDPSPFIHTNFIGTYTLLEAARKY-------D-IRFHHVSTDEVY-GDLPLREDLPG 138 (346)
T ss_dssp TCSEEEECCSCCC-HHHH----HHCCHHHHHHHTHHHHHHHHHHHHH-------T-CEEEEEEEGGGG-CCBCCGGGSTT
T ss_pred hhhhhhhhhhccc-ccch----hhCcccceeeehHhHHhhhhhhccc-------c-ccccccccceEe-cccCccccccc
Confidence 4777999998765 2111 1223467889999999999886432 2 246666665432 211
Q ss_pred ----------------CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcc
Q psy612 217 ----------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 217 ----------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 256 (1005)
..+.|+.+|.+.+.+++...+. ++ +++.+..+.+
T Consensus 139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i------~~~ilR~~~v 189 (346)
T d1oc2a_ 139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV------KATISNCSNN 189 (346)
T ss_dssp TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCE
T ss_pred cccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC------CEEEEeecce
Confidence 1356999999999998765443 44 6666655433
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.46 E-value=4.8e-07 Score=97.89 Aligned_cols=163 Identities=15% Similarity=0.147 Sum_probs=108.2
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcE-----EEEecCC--CchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTN-----LILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~-----vil~~r~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
.+|||||+|=||..++++|+++|..+ ++...+. .........+ .....+.++.+|.++...... .
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~-------~ 73 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAR-------E 73 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHH-------H
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhc-------c
Confidence 37999999999999999999998642 3322211 1111111111 224578999999999875543 2
Q ss_pred cCCccEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC------
Q psy612 143 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 216 (1005)
Q Consensus 143 ~g~idgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~------ 216 (1005)
....|.|||+|+... ... ..+.....+++|+.|++++.+++.. .....||++||.+..-...
T Consensus 74 ~~~~d~vi~~a~~~~-~~~----~~~~~~~~~~~N~~gt~~ll~~~~~-------~~~~~~I~~Ss~~~yg~~~~~~~~E 141 (322)
T d1r6da_ 74 LRGVDAIVHFAAESH-VDR----SIAGASVFTETNVQGTQTLLQCAVD-------AGVGRVVHVSTNQVYGSIDSGSWTE 141 (322)
T ss_dssp TTTCCEEEECCSCCC-HHH----HHHCCHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred ccccceEEeeccccc-ccc----cccchHHHhhhhHHHHHHHHHHHHH-------cCCceEEEeecceeecCCCCCCCCC
Confidence 347899999998754 221 2233455778999999999998532 3456799988876542221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-cccccCCceEEEEeCCcccC
Q psy612 217 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 258 (1005)
Q Consensus 217 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 258 (1005)
..+.|+.+|...+.+++...++ ++ +++.+..+.+-+
T Consensus 142 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lR~~~vyG 183 (322)
T d1r6da_ 142 SSPLEPNSPYAASKAGSDLVARAYHRTYGL------DVRITRCCNNYG 183 (322)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEeeeEEC
Confidence 2357999999999998876544 33 667776655543
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.42 E-value=2.4e-07 Score=90.90 Aligned_cols=120 Identities=11% Similarity=0.086 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcccccccchh
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 629 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~~v~taCsS 629 (1005)
..-+..+++.+||++||+++++++ -|++++..+++.. ...+.+|...||.+.+++-|..+|++
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId----lli~~s~t~~~~~-------------p~~a~~v~~~Lg~~~~~~di~~~C~g 111 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDALF-------------PDTAALVQARFGLKAFAYDLLAGCPG 111 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEEE-------------SCHHHHHHHHTTCCCEEEEEECSTTH
T ss_pred ccHHHHHHHHHHHhhcCcccccce----EEEEecccccccc-------------cchHHHHHHHhccCccceeehhcccc
Confidence 457888999999999999987765 4555544433221 22566788889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccch
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 704 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~~ 704 (1005)
.+.||++|...+++|....+|+.+++... ..+.+ +......++|+|++++||++.++
T Consensus 112 ~~~al~~a~~~~~~~~~~~~Lvv~~e~~S-----------~~~~~-------~d~~~~~lfGDgAaA~ll~~~~~ 168 (172)
T d1ub7a1 112 WIYALAQAHALVEAGLAQKVLAVGAEALS-----------KIIDW-------NDRATAVLFGDGGGAAVVGKVRE 168 (172)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGG-----------GTSCT-------TCHHHHTTBCCEEEEEEEECCCT
T ss_pred HHHHHHHHhhhhhcCCcceeEEecccccc-----------cccCC-------CCcCeEEEecceeEEEEEEEcCC
Confidence 99999999999999999999999998631 11222 22234557899999999986553
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=3.4e-07 Score=90.00 Aligned_cols=119 Identities=18% Similarity=0.275 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
...+..+++.+||+++|+.+++++ -+++++...++.. ...+..|...||++. +++-|..+|+
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id----~li~~s~~~~~~~-------------P~~a~~v~~~Lgl~~~~~~di~~~C~ 113 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHAF-------------PSAACQIQSMLGIKGCPAFDVAAACA 113 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCSS-------------SCHHHHHHHHHTCCSSCEEEECCGGG
T ss_pred chHHHHHHHHHhhhhccccccccc----EEEEecCCccccc-------------cchhhhhhhccCCCchhhhhhhhhhc
Confidence 346889999999999999988876 5666665543321 135677888899986 7888999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcccc
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 703 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l~ 703 (1005)
+.+.||+.|...|++|.++.+|+.+++.. ++. +.++ .....+.+|+|+++++|++-+
T Consensus 114 g~~~al~~A~~~i~sg~~~~~Lvv~~e~~-S~~----------~~~~-------d~~~~~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 114 GFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CDPT-------DRGTIIIFGDGAGAAVLAASE 170 (174)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SCTT-------CHHHHTTBCCEEEEEEEEEES
T ss_pred cHHHHHHHHHHHHhcCCcceeEEEeeehh-hcc----------cCCC-------CCCeEEEeceeeEEEEEEeCC
Confidence 99999999999999999999999999862 111 1111 112245789999999998754
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.27 E-value=9.5e-07 Score=93.13 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccchh
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSS 629 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCsS 629 (1005)
.|.-++..++|+++|++++.++ .|++|...... .....++-.++...|+-- |.++|+.+|+|
T Consensus 26 dL~~~a~~~al~~~~i~~~~Id----~vi~G~v~~~g------------~~~~n~aR~~al~aGlp~~vp~~tVn~~CaS 89 (273)
T d1ulqa1 26 DLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAG------------EDNRNVARMALLLAGFPVEVAGCTVNRLCGS 89 (273)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSS------------TTTTTHHHHHHHHTTCCTTCEEEEEECGGGH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc------------cccccHHHHHHHHcCCCCccceEEEecccch
Confidence 3667899999999999998887 79999653311 111234555666667743 89999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMI 658 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~ 658 (1005)
|+.||++|++.|++|+.|++|+||++.+.
T Consensus 90 g~~Ai~~a~~~I~~G~~d~~lagG~EsmS 118 (273)
T d1ulqa1 90 GLEAVAQAARAIWAGEGKVYIGSGVESMS 118 (273)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhcCCCccceeeeccccc
Confidence 99999999999999999999999999754
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.24 E-value=9e-07 Score=92.87 Aligned_cols=90 Identities=14% Similarity=0.146 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccchh
Q psy612 552 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSS 629 (1005)
Q Consensus 552 rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCsS 629 (1005)
-|...+..++|+++|+++++++ .|++|...... ....++-.++...|+.- |.++|+..|+|
T Consensus 29 dL~~~~~~~~l~~~~i~~~~Id----~vi~G~~~~~~-------------~~~n~ar~~al~aglp~~vpa~tv~~~C~S 91 (268)
T d1m3ka1 29 ELGATVISAVLERAGVAAGEVN----EVILGQVLPAG-------------EGQNPARQAAMKAGVPQEATAWGMNQLAGS 91 (268)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTT-------------SCSCHHHHHHHHTTCCTTSEEEEEECGGGH
T ss_pred HHHHHHHHHHHHHcCCCHHHCc----EEEEeeccccC-------------cchHHHhHHHHHhCCcccccceeecccCcc
Confidence 5677899999999999999887 78888754211 11235666777888753 88999999999
Q ss_pred HHHHHHHHHHHHhcCCcCEEEEeecccCC
Q psy612 630 SLVATHIACQSLRQHECDTAISAGVNLMI 658 (1005)
Q Consensus 630 sl~Al~~A~~~l~~G~~d~alvggv~~~~ 658 (1005)
|+.||++|+++|++|++|++||||++.+.
T Consensus 92 g~~Ai~~Aa~~I~~G~~dvvlagG~EsmS 120 (268)
T d1m3ka1 92 GLRAVALGMQQIATGDASIIVAGGMESMS 120 (268)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEST
T ss_pred cchHHHHHHHHHhCCCceEEeeccccccc
Confidence 99999999999999999999999999743
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.23 E-value=1.5e-06 Score=85.80 Aligned_cols=118 Identities=19% Similarity=0.174 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC-Ccccccccch
Q psy612 550 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 628 (1005)
Q Consensus 550 q~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-ps~~v~taCs 628 (1005)
..-+..+++.+||+++|+.+++++ .+++++...++.. ...+..+...++... +++-|..+|+
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId----~li~~s~~~~~~~-------------p~~a~~v~~~l~~~~~~~~Dv~~~C~ 120 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVHT-------------PPLSVAIAHELGADNAGGFDLSAACA 120 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCCS-------------SCHHHHHHHHHTCTTCEEEEEECGGG
T ss_pred HHHHhHHHHHhhhhhccCChhHCe----EEEEeccCCcccc-------------ccHHHHHHHhhcCCCccceeHHhhhc
Confidence 356889999999999999988876 5666654433221 124566788888754 7888999999
Q ss_pred hHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 629 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 629 Ssl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
+.+.||+.|...|++|...-+|+.+++... + .+. ++.....+.+|+|+++++|++-
T Consensus 121 g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s-~----------~~~-------~~d~~~~~lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 121 GFCHALSIAADAVESGGSRHVLVVATERMT-D----------VID-------LADRSLSFLFGDGAGAAVVGPS 176 (181)
T ss_dssp HHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-G----------GSC-------SSCTTTTTTBCEEEEEEEEEEE
T ss_pred cHHHHHHHHhCHhhcCCCceeEEeeecccc-c----------cCC-------CCCcceEEEeeeeeEEEEEEeC
Confidence 999999999999999999999999998632 1 122 2223346789999999999864
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.17 E-value=3.5e-06 Score=89.05 Aligned_cols=129 Identities=16% Similarity=0.066 Sum_probs=89.9
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|=||..+++.|.++|. .+++..++.. +.+|++|.+.++++++.. .+|.||
T Consensus 3 ILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi 59 (298)
T d1n2sa_ 3 ILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVIV 59 (298)
T ss_dssp EEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred EEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence 89999999999999999998874 4555444431 346999999998888764 589999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-----------CCh
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----------GSC 219 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~-----------g~~ 219 (1005)
|+||... .. .....+ ...+..|+.++.+|.+++ .. ....++++||.....+.. ...
T Consensus 60 h~Aa~~~-~~-~~~~~~---~~~~~~n~~~~~~l~~~~-------~~-~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~ 126 (298)
T d1n2sa_ 60 NAAAHTA-VD-KAESEP---ELAQLLNATSVEAIAKAA-------NE-TGAWVVHYSTDYVFPGTGDIPWQETDATSPLN 126 (298)
T ss_dssp ECCCCCC-HH-HHTTCH---HHHHHHHTHHHHHHHHHH-------TT-TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSS
T ss_pred Eeccccc-cc-ccccCc---cccccccccccccchhhh-------hc-cccccccccccccccCCCCCCCccccccCCCc
Confidence 9999765 21 122222 457788899999998884 22 235577777754332211 135
Q ss_pred hhhHHHHHHHHHHHHH
Q psy612 220 DYAMGNRFQTVYAKYL 235 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~ 235 (1005)
.|+.+|...+.+.+..
T Consensus 127 ~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 127 VYGKTKLAGEKALQDN 142 (298)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHhhhhhhhhhhHHhh
Confidence 7998888777666543
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.12 E-value=1.9e-06 Score=89.99 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--Ccccccccc
Q psy612 551 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~Ale-dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taC 627 (1005)
+.|+-++..++|+ ++|+++++++ .|++|....... ....++-.++...++-. |.++|+..|
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~Id----~vi~G~v~~~~~------------~g~n~aR~~al~ag~p~~vp~~tV~~~C 94 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLE------------QGWNIARMASLMTQIPHTSAAQTVSRLC 94 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBT------------TTTTHHHHHHTTSSSCTTSEEEEEECGG
T ss_pred HHHHHHHHHHHHHhcCCCCHHHee----EEEEEeeccccc------------ccccchhhhHhhhhcccccchhhccccc
Confidence 3677788999999 6999998887 788886533211 01123444454455543 899999999
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCC
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMI 658 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~ 658 (1005)
+||+.||++|++.|++|+.|++|+||++.+.
T Consensus 95 ~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS 125 (262)
T d1wdkc1 95 GSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125 (262)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEETT
T ss_pred cHHHHHHHHHHHHHHhhcCCceeeecccccc
Confidence 9999999999999999999999999999753
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.05 E-value=7.3e-06 Score=82.61 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=87.3
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCc-EEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~-~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
|.+|||||+|-||+.+++.|.++|.. .|+...|++... ..+ +..++.|..++ . ....+.+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~---~~~~~~d~~~~---~---~~~~~~~d 64 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPR---LDNPVGPLAEL---L---PQLDGSID 64 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTT---EECCBSCHHHH---G---GGCCSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------ccc---ccccccchhhh---h---hccccchh
Confidence 78999999999999999999999874 556666654211 112 34455554332 1 22345789
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCChhhhHHHHH
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 227 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~~g~~~Yaaana~ 227 (1005)
.|||++|... .. ..+. ......++.++.++.+++ +.....+|+++||..+.. .....|..+|..
T Consensus 65 ~vi~~~g~~~-~~---~~~~---~~~~~~~~~~~~~~~~~a-------~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~ 128 (212)
T d2a35a1 65 TAFCCLGTTI-KE---AGSE---EAFRAVDFDLPLAVGKRA-------LEMGARHYLVVSALGADA--KSSIFYNRVKGE 128 (212)
T ss_dssp EEEECCCCCH-HH---HSSH---HHHHHHHTHHHHHHHHHH-------HHTTCCEEEEECCTTCCT--TCSSHHHHHHHH
T ss_pred eeeeeeeeec-cc---cccc---cccccchhhhhhhccccc-------cccccccccccccccccc--ccccchhHHHHH
Confidence 9999998753 11 1122 346677889998888874 334677899999876542 344679999977
Q ss_pred HHHHH
Q psy612 228 QTVYA 232 (1005)
Q Consensus 228 l~~la 232 (1005)
.+.+.
T Consensus 129 ~E~~l 133 (212)
T d2a35a1 129 LEQAL 133 (212)
T ss_dssp HHHHH
T ss_pred Hhhhc
Confidence 66544
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.00 E-value=1.2e-05 Score=80.33 Aligned_cols=115 Identities=17% Similarity=0.111 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcc--cc-cccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVM--AI-NTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~--~v-~taC 627 (1005)
..+..+++.+||++||+.+++++ -++++++.+ +. . + ..+..+...+++.+... .+ ..+|
T Consensus 76 ~~la~~Aa~~aL~~ag~~~~dId----~lI~~s~t~-~~--------~----P-~~aa~v~~~lg~~~~~~~~~i~~~gC 137 (200)
T d1u0ma1 76 KSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM--------M----P-SLTAWLINEMGFDSTTRQIPIAQLGC 137 (200)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC--------S----S-CHHHHHHHHTTCCTTCEEEEECSCGG
T ss_pred HHHHHHHHHHHHHHcCCChhhhh----eEEEeccCC-CC--------c----c-hhHHHHHHHHhcCCCeeEeccccchh
Confidence 35888999999999999988876 455544332 11 1 1 25667888899887444 44 5799
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCC----CCceecCccEEEEEc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA----NGLVPSEAVVAVVLK 700 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a----~G~~~gEGa~~vvLk 700 (1005)
++++.+|+.|...|++|..+.+||.+++.... .+.+ -|.+. ....+|+|++++||.
T Consensus 138 ~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~-----------~~~~------~d~~~~~~~~~~lFgDGAaA~ll~ 197 (200)
T d1u0ma1 138 AAGGAAINRAHDFCTAYPEANALIVACEFCSL-----------CYQP------TDLGVGSLLCNGLFGDGIAAAVVR 197 (200)
T ss_dssp GHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGG-----------GCCT------TCCSHHHHHHHHHBCEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEEEecccc-----------ccCC------CCCChhhhhcccccccccEEEEEe
Confidence 99999999999999999999999999986321 0111 11111 123579999999996
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.93 E-value=3.2e-05 Score=80.81 Aligned_cols=124 Identities=17% Similarity=0.131 Sum_probs=82.1
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|-||..++++|.++|..++. ..|++ +|++|.++++++++.. .+|.||
T Consensus 4 IlItGasGfiG~~l~~~L~~~g~~Vi~-~~r~~--------------------~D~~d~~~~~~~l~~~-----~~d~vi 57 (281)
T d1vl0a_ 4 ILITGANGQLGREIQKQLKGKNVEVIP-TDVQD--------------------LDITNVLAVNKFFNEK-----KPNVVI 57 (281)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSEEEEE-ECTTT--------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEE-eechh--------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence 899999999999999999999876544 44432 4999999998888754 689999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------CCCCh
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----------DFGSC 219 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g-----------~~g~~ 219 (1005)
|+|+... . .. ........+..|+.....+....... ...++++||...... .....
T Consensus 58 h~a~~~~-~-~~---~~~~~~~~~~~n~~~~~~~~~~~~~~--------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~ 124 (281)
T d1vl0a_ 58 NCAAHTA-V-DK---CEEQYDLAYKINAIGPKNLAAAAYSV--------GAEIVQISTDYVFDGEAKEPITEFDEVNPQS 124 (281)
T ss_dssp ECCCCCC-H-HH---HHHCHHHHHHHHTHHHHHHHHHHHHH--------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred eeccccc-c-cc---ccccchhhcccccccccccccccccc--------cccccccccceeeeccccccccccccccchh
Confidence 9998754 1 11 12223456667777777776664321 334555555432211 12345
Q ss_pred hhhHHHHHHHHHHH
Q psy612 220 DYAMGNRFQTVYAK 233 (1005)
Q Consensus 220 ~Yaaana~l~~la~ 233 (1005)
.|+..|.....+.+
T Consensus 125 ~~~~~k~~~e~~~~ 138 (281)
T d1vl0a_ 125 AYGKTKLEGENFVK 138 (281)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHH
Confidence 68877776665543
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.87 E-value=3.3e-05 Score=79.03 Aligned_cols=121 Identities=12% Similarity=0.149 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCCCcc---cccccc
Q psy612 551 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVM---AINTAC 627 (1005)
Q Consensus 551 ~rl~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~Gps~---~v~taC 627 (1005)
..|..+++.+||++||++++++. .|++.++.+.+.. . .+..+-..+++..+.. .+..+|
T Consensus 103 ~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~~~~p-------------~-~~a~~~~~l~~~~~~~~~~~~~~~C 164 (235)
T d1bi5a1 103 PRLGKEAAVKAIKEWGQPKSKIT----HLIVCTTSGVDMP-------------G-ADYQLTKLLGLRPYVKRYMMYQQGC 164 (235)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCCCSS-------------C-HHHHHHHHHTCCTTCEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHcCCChhHCc----EEEEecccCCccC-------------c-cHHHHHHHHhcCCCceEEeeecCcc
Confidence 35888999999999999988776 5666665443211 1 2445666677766543 346789
Q ss_pred hhHHHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCC-CCCCCcCCCCCCCCceecCccEEEEEccc
Q psy612 628 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-PDGKCYVFDERANGLVPSEAVVAVVLKRL 702 (1005)
Q Consensus 628 sSsl~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls-~~g~~~pfd~~a~G~~~gEGa~~vvLk~l 702 (1005)
++.+.||..|...|++|..+-+||.++++... .+. ++..+ ++.--..+.+|+|++++||...
T Consensus 165 ~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~-----------~~~~~d~~~--~~~~v~~~lFGDGA~A~vl~~~ 227 (235)
T d1bi5a1 165 FAGGTVLRLAKDLAENNKGARVLVVCSEVTAV-----------TFRGPSDTH--LDSLVGQALFGDGAAALIVGSD 227 (235)
T ss_dssp THHHHHHHHHHHHHHTSTTCEEEEEEEECGGG-----------TCCCCCTTC--HHHHHHHHHBCCEEEEEEEESS
T ss_pred chHHHHHHHHHHHHHcCCCCeEEEEEeeecce-----------ecCCCCCCc--hhhhcceeeeccceEEEEEecC
Confidence 99999999999999999999999999996321 011 11000 0000012357999999999743
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.79 E-value=2.1e-05 Score=82.04 Aligned_cols=89 Identities=19% Similarity=0.159 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHH----hcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCC--CCCcccccc
Q psy612 552 RHLLQESWLALE----DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINT 625 (1005)
Q Consensus 552 rl~L~~a~~Ale----dAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~Gps~~v~t 625 (1005)
-|+-++..++|+ ++|++++.++ .|++|..... + ....++-.++..-|+ .=|.++|+.
T Consensus 37 ~L~~~~i~~~l~r~~~~~~idp~~Id----~vi~G~v~~~------------g-~~~~~aR~~al~aglp~~vpa~tVnr 99 (269)
T d1afwa1 37 YLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNV------------G-AGATEHRAACLASGIPYSTPFVALNR 99 (269)
T ss_dssp HHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSB------------G-GGHHHHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHhCCccccCChhhcC----EEEecccccc------------c-cccccchhhhhhccccccccchhccc
Confidence 345566777775 5678888877 6888864321 1 112345455556666 459999999
Q ss_pred cchhHHHHHHHHHHHHhcCCcCEEEEeecccC
Q psy612 626 ACSSSLVATHIACQSLRQHECDTAISAGVNLM 657 (1005)
Q Consensus 626 aCsSsl~Al~~A~~~l~~G~~d~alvggv~~~ 657 (1005)
.|+||+.||++|++.|++|+.|++|+||++.+
T Consensus 100 ~CaSg~~Ai~~Aa~~I~~G~~divlagG~Esm 131 (269)
T d1afwa1 100 QCSSGLTAVNDIANKIKVGQIDIGLALGVESM 131 (269)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred cchHHHHHHHHHHHHHhhccccceeeeecccc
Confidence 99999999999999999999999999999964
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=97.76 E-value=0.0001 Score=77.83 Aligned_cols=81 Identities=20% Similarity=0.206 Sum_probs=56.9
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+.+|||||+|-||..++++|+++|..++++.++... .....+.+.. ....+.++.+|++|.+.+.+++ ...
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~-------~~~ 76 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL-------KQV 76 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH-------TTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc-------cCc
Confidence 458999999999999999999999877766654422 1122222221 1334778899999988776554 357
Q ss_pred cEEEEcCccc
Q psy612 147 DGVLHIAGIS 156 (1005)
Q Consensus 147 dgvIh~AG~~ 156 (1005)
+.+||+++..
T Consensus 77 ~~~~~~~~~~ 86 (312)
T d1qyda_ 77 DVVISALAGG 86 (312)
T ss_dssp SEEEECCCCS
T ss_pred chhhhhhhhc
Confidence 8889988653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=97.67 E-value=0.00024 Score=74.29 Aligned_cols=83 Identities=18% Similarity=0.267 Sum_probs=58.8
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCch--HHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~--~~~~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.|.+|||||+|-||..+++.|+++|..++++.++.... .+....+... ...+.++.+|+++.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence 46799999999999999999999998877776554321 1222222221 2346778899999987666553
Q ss_pred CccEEEEcCcccC
Q psy612 145 PIDGVLHIAGISG 157 (1005)
Q Consensus 145 ~idgvIh~AG~~~ 157 (1005)
..+.+||+++...
T Consensus 76 ~~~~vi~~~~~~~ 88 (307)
T d1qyca_ 76 NVDVVISTVGSLQ 88 (307)
T ss_dssp TCSEEEECCCGGG
T ss_pred hceeeeecccccc
Confidence 4788999887543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=97.66 E-value=0.00024 Score=76.85 Aligned_cols=132 Identities=13% Similarity=0.001 Sum_probs=81.1
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCc
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 146 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~i 146 (1005)
+.|+++||||+|.||..+++.|.++|..+++++++..... ...+... ..+.++.+|++|..++ ++. .+...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~-~~v~~~~gD~~d~~~~---~~~---a~~~~ 72 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI-PNVTLFQGPLLNNVPL---MDT---LFEGA 72 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS-TTEEEEESCCTTCHHH---HHH---HHTTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhccc-CCCEEEEeeCCCcHHH---HHH---HhcCC
Confidence 5789999999999999999999999998877765443321 2333332 3478899999996543 222 23467
Q ss_pred cEEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CCCCChhhhHH
Q psy612 147 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSCDYAMG 224 (1005)
Q Consensus 147 dgvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~--g~~g~~~Yaaa 224 (1005)
|.++++..... . .++....++..++.. .....++.+||+.... +......|..+
T Consensus 73 ~~~~~~~~~~~-~----------------~~~~~~~~~~~aa~~-------agv~~~v~~Ss~~~~~~~~~~~~~~~~~~ 128 (350)
T d1xgka_ 73 HLAFINTTSQA-G----------------DEIAIGKDLADAAKR-------AGTIQHYIYSSMPDHSLYGPWPAVPMWAP 128 (350)
T ss_dssp SEEEECCCSTT-S----------------CHHHHHHHHHHHHHH-------HSCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred ceEEeeccccc-c----------------hhhhhhhHHHHHHHH-------hCCCceEEEeeccccccCCcccchhhhhh
Confidence 88877653322 1 122333445555322 1334577788865433 33344566677
Q ss_pred HHHHHHH
Q psy612 225 NRFQTVY 231 (1005)
Q Consensus 225 na~l~~l 231 (1005)
|.....+
T Consensus 129 k~~~~~~ 135 (350)
T d1xgka_ 129 KFTVENY 135 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655443
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.00012 Score=77.04 Aligned_cols=158 Identities=16% Similarity=0.178 Sum_probs=92.9
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 150 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvI 150 (1005)
+|||||+|=||..++++|+++|...|+.+.+-....+.. .+... ..+|..+.+........ ...+..++.++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~i~ 73 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-NLVDL------NIADYMDKEDFLIQIMA-GEEFGDVEAIF 73 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH-HHHTS------CCSEEEEHHHHHHHHHT-TCCCSSCCEEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh-ccccc------chhhhccchHHHHHHhh-hhcccchhhhh
Confidence 799999999999999999999975555443221111111 12221 11233343333222211 23456789999
Q ss_pred EcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------CCCh
Q psy612 151 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FGSC 219 (1005)
Q Consensus 151 h~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSia~~~g~-----------~g~~ 219 (1005)
|.|+... . .... .+.....++.++.++.+++... ... +|++||.....+. ....
T Consensus 74 ~~aa~~~-~---~~~~---~~~~~~~~~~~~~~~l~~~~~~-------~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~ 138 (307)
T d1eq2a_ 74 HEGACSS-T---TEWD---GKYMMDNNYQYSKELLHYCLER-------EIP-FLYASSAATYGGRTSDFIESREYEKPLN 138 (307)
T ss_dssp ECCSCCC-T---TCCC---HHHHHHHTHHHHHHHHHHHHHH-------TCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred hhccccc-c---cccc---cccccccccccccccccccccc-------ccc-cccccccccccccccccccccccccccc
Confidence 9997543 1 1112 2345677788888887774322 233 5555555544432 2456
Q ss_pred hhhHHHHHHHHHHHHHHhccccccCCceEEEEeCCcc
Q psy612 220 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 256 (1005)
Q Consensus 220 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 256 (1005)
.|+.+|...+.+++...... +.+++.+.+...
T Consensus 139 ~Y~~~K~~~e~~~~~~~~~~-----~~~~~~~r~~~v 170 (307)
T d1eq2a_ 139 VYGYSKFLFDEYVRQILPEA-----NSQIVGFRYFNV 170 (307)
T ss_dssp HHHHHHHHHHHHHHHHGGGC-----SSCEEEEEECEE
T ss_pred ccccccchhhhhcccccccc-----ccccccccceeE
Confidence 79999999999988775552 236666655443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.37 E-value=6.3e-08 Score=96.56 Aligned_cols=45 Identities=20% Similarity=0.195 Sum_probs=35.5
Q ss_pred EEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhC
Q psy612 71 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF 115 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~ 115 (1005)
+.|+||+|++|+++|+.|+++|+++++..++.+..+++.+++...
T Consensus 3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 567899999999999999999998777755545566676776644
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=97.13 E-value=0.00015 Score=69.82 Aligned_cols=109 Identities=13% Similarity=0.176 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEEeeccCCccccccccccccccchhHHHHHHHHHhCCCC--CcccccccchhH
Q psy612 553 HLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSSS 630 (1005)
Q Consensus 553 l~L~~a~~AledAG~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--ps~~v~taCsSs 630 (1005)
+.++++.+||++.+ .+++++++-.+....+. ....+..+...+++.. .++-+..+|+++
T Consensus 53 ma~~Aa~~al~~~~-------~~~id~li~~t~~~~~~------------~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~ 113 (166)
T d1xpma1 53 MGANAAKDIITDED-------KKKIGMVIVATESAVDA------------AKAAAVQIHNLLGIQPFARCFEMKEACYAA 113 (166)
T ss_dssp HHHHHHHTTCCHHH-------HHHEEEEEEECSSCSBS------------SSCHHHHHHHHTTCCSSCEEEEEESTTTTH
T ss_pred HHHHHHHhhhcccc-------CCCCCeEEEeccccccc------------cchhHHHHHHhhccccceEEeeecccHHHH
Confidence 56666666665543 23566665443322111 1235677888889876 668899999999
Q ss_pred HHHHHHHHHHHhcCCcCEEEEeecccCCCHHHHHHHHHcCCCCCCCCCcCCCCCCCCceecCccEEEEEcc
Q psy612 631 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 701 (1005)
Q Consensus 631 l~Al~~A~~~l~~G~~d~alvggv~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~a~G~~~gEGa~~vvLk~ 701 (1005)
+.||+.|...|++|....+||.+.+.... . ++ ..+-+..|+|+++++|.+
T Consensus 114 ~~al~~A~~~i~~~~~~~alvV~sd~~~~-----------~---------~~-~~~~~~fGDGA~A~ll~~ 163 (166)
T d1xpma1 114 TPAIQLAKDYLATRPNEKVLVIATDTARY-----------G---------LN-SGGEPTQGAGAVAMVIAH 163 (166)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEEEEECC-----------C---------TT-CSSGGGCEEEEEEEEEEE
T ss_pred HHHHHHHhhHHhcCCCCeEEEEEEceEec-----------c---------CC-CCCCccCCCeeEEEEEec
Confidence 99999999999999999999999885221 0 11 112367899999999975
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.08 E-value=0.00026 Score=63.81 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=64.6
Q ss_pred CCceEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCC
Q psy612 709 GDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 787 (1005)
Q Consensus 709 g~~I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~ 787 (1005)
|=+++|.|.+++... |-... +.+-..+++++|+++|++++|||++|.|-.... -.-+..+.++-...+
T Consensus 2 gl~plAri~~~a~~g~~P~~m------~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~-----q~l~~~~~l~id~~k 70 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGVPPEIM------GVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-----QALYCIHKLGIDLNK 70 (124)
T ss_dssp TCCCCEEEEEEEEEECCGGGG------GGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCGGG
T ss_pred CCcEEEEEEEEEEEecCHHHh------hhChHHHHHHHHHHcCCCcccCcEEEeccchhH-----HHHHHHHHcCCChhh
Confidence 346789999998652 21111 234578899999999999999999999966542 222334444422111
Q ss_pred CCceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 788 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 788 ~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
-+ +-|..-+ +||+.+|||.--++..+..|++
T Consensus 71 vN--~~GGaiA-lGHP~GaSGarlv~~l~~~L~~ 101 (124)
T d1afwa2 71 VN--PRGGAIA-LGHPLGCTGARQVATILRELKK 101 (124)
T ss_dssp BS--TTCCHHH-HCBCTTTHHHHHHHHHHHHSCT
T ss_pred cc--ccCccce-ecCCcCCchHHHHHHHHHHhcc
Confidence 11 1122222 5999999999988888877754
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=96.82 E-value=0.00089 Score=60.19 Aligned_cols=96 Identities=19% Similarity=0.226 Sum_probs=60.6
Q ss_pred eEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH--HHHhccCCCCC
Q psy612 712 IHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL--HDVFKNKTYNQ 788 (1005)
Q Consensus 712 I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al--~~~~~~~~~~~ 788 (1005)
++|.|.++++.. |.... +.+-..+++++|+++|++++|||++|.|-... .+.| .+.+.-.-...
T Consensus 2 PlA~i~~~~~~g~~P~~~------~~~P~~A~~~~L~r~gl~~~Did~~EinEAFA-------aq~l~~~~~~~l~~d~~ 68 (125)
T d1ulqa2 2 PLARVRAIAVAGVPPRIM------GIGPVPATRKALERAGLSFSDLGLIELNEAFA-------AQALAVLREWSLSMEDQ 68 (125)
T ss_dssp CSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHTTCCGGGCSEEEECCSBH-------HHHHHHHHHHTCCTTCT
T ss_pred CeEEEEEEEEEecCHHHH------hhccHHHHHhHhhccCcCccccchheeccccc-------hhHHHHHHHhhccCchh
Confidence 468889988652 11111 12346789999999999999999999995443 2233 22222111111
Q ss_pred CceeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 789 KFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 789 ~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
..-+-|..-+ +||+.+|+|.--++..+-.|+.
T Consensus 69 kvN~~GGaIA-lGHP~GASGari~~tl~~~L~~ 100 (125)
T d1ulqa2 69 RLNPNGGAIA-LGHPLGASGARILTTLVHEMRR 100 (125)
T ss_dssp TBSTTCCHHH-HCCCHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCccc-ccCCccccchhHHHHHHHHHHh
Confidence 1111122222 5999999999999999988886
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.68 E-value=0.0012 Score=64.63 Aligned_cols=90 Identities=17% Similarity=0.189 Sum_probs=61.5
Q ss_pred cccCCCEEEE-ECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH-h
Q psy612 64 YIKQGGTYLI-TGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII-N 141 (1005)
Q Consensus 64 ~~~~~~~~lI-TGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~-~ 141 (1005)
.++++.+++| +||+||+|.+..+..-..|+++|.++++.+..++..+.+++.|....+.. |-.+..++.+.+.++. .
T Consensus 25 ~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~ 103 (189)
T d1gu7a2 25 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQ 103 (189)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhh
Confidence 4677765555 79999999999888777899888888887777778888888887654322 1111122333333333 2
Q ss_pred hcCCccEEEEcCc
Q psy612 142 NIGPIDGVLHIAG 154 (1005)
Q Consensus 142 ~~g~idgvIh~AG 154 (1005)
..+++|.+|.+.|
T Consensus 104 ~g~~vdvv~D~vg 116 (189)
T d1gu7a2 104 SGGEAKLALNCVG 116 (189)
T ss_dssp HTCCEEEEEESSC
T ss_pred ccCCceEEEECCC
Confidence 3457999999876
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0031 Score=60.61 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=57.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.++||+||+|++|....+.....|+++++++++ + +..+.+++.|..-. .|.++.+-.+++.+... -
T Consensus 25 ~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~-~---~~~~~~~~~Ga~~v---i~~~~~~~~~~i~~~t~--~ 95 (174)
T d1yb5a2 25 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT-E---EGQKIVLQNGAHEV---FNHREVNYIDKIKKYVG--E 95 (174)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-H---HHHHHHHHTTCSEE---EETTSTTHHHHHHHHHC--T
T ss_pred CCCCCCEEEEEeccccccccccccccccCccccccccc-c---cccccccccCcccc---cccccccHHHHhhhhhc--c
Confidence 46789999999999999999999888889977666654 2 23345566776533 36666544443333322 2
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
..+|.+|.+.|
T Consensus 96 ~g~d~v~d~~g 106 (174)
T d1yb5a2 96 KGIDIIIEMLA 106 (174)
T ss_dssp TCEEEEEESCH
T ss_pred CCceEEeeccc
Confidence 36999999876
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=96.46 E-value=0.00065 Score=61.43 Aligned_cols=99 Identities=22% Similarity=0.211 Sum_probs=62.0
Q ss_pred CceEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH--HHhccCCC
Q psy612 710 DPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH--DVFKNKTY 786 (1005)
Q Consensus 710 ~~I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~--~~~~~~~~ 786 (1005)
-+++|.|++++... |-... +.+-..+++++|+++|++++|||++|.|-.. -.+++. +.+.....
T Consensus 2 l~pla~i~~~~~~g~dP~~m------g~~p~~A~~klL~ragl~~~did~~EinEAF-------A~q~l~~~~~~~~~~~ 68 (128)
T d1wdkc2 2 LEPLAVIRSMAVAGVDPAIM------GYGPVPATQKALKRAGLNMADIDFIELNEAF-------AAQALPVLKDLKVLDK 68 (128)
T ss_dssp CCCSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCCEEEECCSB-------HHHHHHHHHHTTCGGG
T ss_pred CCEEEEEEEEEEEecCHHHh------ccCcHHHHHHHhhhcCccccccceEEeeccc-------chhhhhhhhhcccccC
Confidence 45788999988653 22211 2234678999999999999999999999543 233332 22211000
Q ss_pred C-CCceeEeccCCCcCchhhchhhHHHHHHHHHhhcC
Q psy612 787 N-QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYK 822 (1005)
Q Consensus 787 ~-~~~~~igsvK~~iGH~~~AaG~~~lik~~l~l~~~ 822 (1005)
. ...-+-|+.-+ +||+.+|+|.--++..+-.|+++
T Consensus 69 ~~ekvN~~GGaiA-lGHP~GASGaRlv~~l~~~L~~~ 104 (128)
T d1wdkc2 69 MNEKVNLHGGAIA-LGHPFGCSGARISGTLLNVMKQN 104 (128)
T ss_dssp HHHHBSTTCCHHH-HCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcceecCCCCccc-ccccccccchhHHHHHHHHHHhc
Confidence 0 00001122222 59999999999999998888773
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.28 E-value=0.007 Score=58.52 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=56.9
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.++||+||+||+|.+.++.....|++++.+.++. +..+.+++.|....+ |-.+++..+.+.+.. .
T Consensus 25 ~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~----~~~~~~~~~Ga~~vi---~~~~~~~~~~~~~~~--~ 95 (182)
T d1v3va2 25 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD----EKIAYLKQIGFDAAF---NYKTVNSLEEALKKA--S 95 (182)
T ss_dssp TCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHTTCSEEE---ETTSCSCHHHHHHHH--C
T ss_pred hCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH----HHHHHHHhhhhhhhc---ccccccHHHHHHHHh--h
Confidence 3578899999999999999999988888888666665543 234566677866544 333333333333332 2
Q ss_pred cCCccEEEEcCc
Q psy612 143 IGPIDGVLHIAG 154 (1005)
Q Consensus 143 ~g~idgvIh~AG 154 (1005)
...+|.||.+.|
T Consensus 96 ~~Gvd~v~D~vG 107 (182)
T d1v3va2 96 PDGYDCYFDNVG 107 (182)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCCceeEEecC
Confidence 347999999887
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=96.16 E-value=0.0028 Score=56.76 Aligned_cols=96 Identities=16% Similarity=0.093 Sum_probs=61.3
Q ss_pred eEEEEEEeeecc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q psy612 712 IHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 790 (1005)
Q Consensus 712 I~avI~g~~~~~-dG~~~~~~~p~~~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~ 790 (1005)
++|.|.++++.. |-... +.+-..+++++|+++|++.+|||++|.|-.... -.-+..+.++-...+-+
T Consensus 3 Plari~~~a~~g~dP~~m------g~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~-----q~la~~~~l~id~~kvN- 70 (124)
T d1m3ka2 3 PLGRIVSWATVGVDPKVM------GTGPIPASRKALERAGWKIGDLDLVEANEAFAA-----QACAVNKDLGWDPSIVN- 70 (124)
T ss_dssp CSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHCCCGGGBS-
T ss_pred cEEEEEEEEEEecChHHh------ccchHHHHHHHHHHcCCChhcccHHHhcccchh-----heeeehHhhCCChhhcC-
Confidence 567888887642 22211 123367899999999999999999999965432 22233444442211111
Q ss_pred eeEeccCCCcCchhhchhhHHHHHHHHHhhc
Q psy612 791 CAITSNKSNIGHTFAASGLVSLINLVQSIKY 821 (1005)
Q Consensus 791 ~~igsvK~~iGH~~~AaG~~~lik~~l~l~~ 821 (1005)
+-|+.= -+||+.+|||.--++..+..|++
T Consensus 71 -~~GGai-AlGHP~GaSGarl~~tl~~~L~~ 99 (124)
T d1m3ka2 71 -VNGGAI-AIGHPIGASGARILNTLLFEMKR 99 (124)
T ss_dssp -TTCCHH-HHCCCTTTHHHHHHHHHHHHHHH
T ss_pred -CCCCcc-ccccCcCccchhHHHHHHHHHHh
Confidence 011111 16999999999999988888877
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.13 E-value=0.0066 Score=58.55 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=56.6
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.++||+||+|++|...++.+...|+++++++++.+ ..+.+++.|.... .|-.+++-.+++.+.. ..
T Consensus 22 ~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~----~~~~l~~~Ga~~v---i~~~~~~~~~~v~~~t--~~ 92 (183)
T d1pqwa_ 22 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA----KREMLSRLGVEYV---GDSRSVDFADEILELT--DG 92 (183)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH----HHHHHHTTCCSEE---EETTCSTHHHHHHHHT--TT
T ss_pred CCCCCCEEEEECCCCCcccccchhhccccccceeeecccc----ccccccccccccc---ccCCccCHHHHHHHHh--CC
Confidence 4678999999999999999999988888988777776532 3456677786633 3555543333322221 12
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
..+|.+|.+.|
T Consensus 93 ~g~d~v~d~~g 103 (183)
T d1pqwa_ 93 YGVDVVLNSLA 103 (183)
T ss_dssp CCEEEEEECCC
T ss_pred CCEEEEEeccc
Confidence 36999999887
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.02 E-value=0.0071 Score=58.13 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=55.7
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+||+||+|...++.....|+++++..++.+. .+.+++.|.... .|-++++-.+++ .++ ..-
T Consensus 25 ~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k----~~~~~~lGa~~v---i~~~~~d~~~~v-~~~-t~g 95 (179)
T d1qora2 25 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK----AQSALKAGAWQV---INYREEDLVERL-KEI-TGG 95 (179)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHHHTCSEE---EETTTSCHHHHH-HHH-TTT
T ss_pred CCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHH----HHHHHhcCCeEE---EECCCCCHHHHH-HHH-hCC
Confidence 46789999999999999999999888888876665555332 334455676532 366664433333 222 123
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
..+|.++.+.|-
T Consensus 96 ~g~d~v~d~~g~ 107 (179)
T d1qora2 96 KKVRVVYDSVGR 107 (179)
T ss_dssp CCEEEEEECSCG
T ss_pred CCeEEEEeCccH
Confidence 468999998863
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.96 E-value=0.0098 Score=57.37 Aligned_cols=85 Identities=20% Similarity=0.117 Sum_probs=55.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCC--CHHHHHHHHHHHHh
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS--DKLKMISEINSIIN 141 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvt--d~~~v~~~~~~i~~ 141 (1005)
.++++.++||+|+ |++|...++.+...|+.+|+.+.+++.. .+.+++.|....+ |.. +..+..+.+.+...
T Consensus 25 ~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~---~~~a~~lGa~~vi---~~~~~~~~~~~~~i~~~~~ 97 (182)
T d1vj0a2 25 ESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNR---LKLAEEIGADLTL---NRRETSVEERRKAIMDITH 97 (182)
T ss_dssp SCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHH---HHHHHHTTCSEEE---ETTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECC-Cccchhheeccccccccccccccccccc---ccccccccceEEE---eccccchHHHHHHHHHhhC
Confidence 4678899999986 8999999999999999888777776533 3444566765332 333 33333333333222
Q ss_pred hcCCccEEEEcCccc
Q psy612 142 NIGPIDGVLHIAGIS 156 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~ 156 (1005)
-..+|+||.+.|..
T Consensus 98 -~~g~Dvvid~vG~~ 111 (182)
T d1vj0a2 98 -GRGADFILEATGDS 111 (182)
T ss_dssp -TSCEEEEEECSSCT
T ss_pred -CCCceEEeecCCch
Confidence 12599999998863
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.86 E-value=0.011 Score=56.18 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=58.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|+|++|++|..++..+...|...|+...+++. ..+.+++.|.... .|-++++..++..+.. .-
T Consensus 24 ~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~---~~~~~~~~Ga~~~---i~~~~~~~~~~~~~~~--~~ 95 (170)
T d1jvba2 24 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE---AVEAAKRAGADYV---INASMQDPLAEIRRIT--ES 95 (170)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH---HHHHHHHHTCSEE---EETTTSCHHHHHHHHT--TT
T ss_pred CCCCCCEEEEEeccccceeeeeecccccccccccccccchh---hHHHHHHcCCcee---eccCCcCHHHHHHHHh--hc
Confidence 46788999999999999999999999999888888877753 3344455676533 2444444344443332 12
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+.+|.+|.++|.
T Consensus 96 ~~~d~vid~~g~ 107 (170)
T d1jvba2 96 KGVDAVIDLNNS 107 (170)
T ss_dssp SCEEEEEESCCC
T ss_pred ccchhhhccccc
Confidence 369999999885
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=95.31 E-value=0.044 Score=51.81 Aligned_cols=85 Identities=20% Similarity=0.200 Sum_probs=54.8
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|+| .|++|...++.+...|++ ++.+.+++ +..+.+++.|....+. .|-.+ ++.....+.+.+..
T Consensus 23 ~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~-vi~v~~~~---~r~~~a~~~ga~~~~~-~~~~~-~~~~~~~~~~~~~~ 95 (170)
T d1e3ja2 23 GVQLGTTVLVIG-AGPIGLVSVLAAKAYGAF-VVCTARSP---RRLEVAKNCGADVTLV-VDPAK-EEESSIIERIRSAI 95 (170)
T ss_dssp TCCTTCEEEEEC-CSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHTTCSEEEE-CCTTT-SCHHHHHHHHHHHS
T ss_pred CCCCCCEEEEEc-ccccchhhHhhHhhhccc-ccccchHH---HHHHHHHHcCCcEEEe-ccccc-cccchhhhhhhccc
Confidence 457888999997 689999999988888985 55555553 2334455667655433 22221 22333444444444
Q ss_pred C-CccEEEEcCcc
Q psy612 144 G-PIDGVLHIAGI 155 (1005)
Q Consensus 144 g-~idgvIh~AG~ 155 (1005)
| .+|.+|.++|.
T Consensus 96 g~g~D~vid~~g~ 108 (170)
T d1e3ja2 96 GDLPNVTIDCSGN 108 (170)
T ss_dssp SSCCSEEEECSCC
T ss_pred ccCCceeeecCCC
Confidence 4 68999999985
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.19 E-value=0.042 Score=52.10 Aligned_cols=84 Identities=14% Similarity=0.244 Sum_probs=58.1
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|.|+ |++|...+..+...|+++|+++.+++. ..+..++.|....+ ..+-.+.....+.+.. .+
T Consensus 23 ~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~---rl~~a~~~Ga~~~~-~~~~~~~~~~~~~~~~---~~ 94 (171)
T d1pl8a2 23 GVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT---RLSKAKEIGADLVL-QISKESPQEIARKVEG---QL 94 (171)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHTTCSEEE-ECSSCCHHHHHHHHHH---HH
T ss_pred CCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH---HHHHHHHhCCcccc-cccccccccccccccc---cC
Confidence 4567889999986 999999999999999988888877653 33344566765433 3333444444444433 33
Q ss_pred C-CccEEEEcCcc
Q psy612 144 G-PIDGVLHIAGI 155 (1005)
Q Consensus 144 g-~idgvIh~AG~ 155 (1005)
| .+|.+|.+.|.
T Consensus 95 g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 95 GCKPEVTIECTGA 107 (171)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCceEEEeccCC
Confidence 3 79999999985
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.94 E-value=0.031 Score=53.14 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=52.0
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.+++++++||+||+|++|+..++.....|+++++..++.+.. +.+++.|....+ |..+. ..++. ..
T Consensus 24 ~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~----~~~~~lGa~~~i---~~~~~------~~~~~-~~ 89 (171)
T d1iz0a2 24 QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL----ALPLALGAEEAA---TYAEV------PERAK-AW 89 (171)
T ss_dssp TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS----HHHHHTTCSEEE---EGGGH------HHHHH-HT
T ss_pred CCCCCCEEEEEeccccchhhhhhhhccccccccccccccccc----ccccccccceee---ehhhh------hhhhh-cc
Confidence 467899999999999999999988888898766665543322 334556765432 33332 22222 33
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
..+|.||.+.|
T Consensus 90 ~g~D~v~d~~G 100 (171)
T d1iz0a2 90 GGLDLVLEVRG 100 (171)
T ss_dssp TSEEEEEECSC
T ss_pred ccccccccccc
Confidence 57999999876
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=94.83 E-value=0.053 Score=52.03 Aligned_cols=81 Identities=11% Similarity=0.132 Sum_probs=58.7
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCc-hHHHH---HHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIY---KKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~-~~~~~---~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
+++.++|.|+ ||.|++++..|++.|.+.+.+..|+.. .++.. +++.... ......+|+.+.+++...+
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 88 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEAL------ 88 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHH------
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhh------
Confidence 5789999997 789999999999999999999888754 33333 2333222 2345678999987665443
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
...|.|||+..+.
T Consensus 89 -~~~diiIN~Tp~G 101 (182)
T d1vi2a1 89 -ASADILTNGTKVG 101 (182)
T ss_dssp -HTCSEEEECSSTT
T ss_pred -cccceeccccCCc
Confidence 3579999997653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.74 E-value=0.035 Score=52.94 Aligned_cols=84 Identities=12% Similarity=0.116 Sum_probs=57.5
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.+++|.|+ |++|...+..+...|+++++++.+++.. .+..++.|..- + .|..+++ +.+.+.++.
T Consensus 24 ~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k---~~~a~~~Ga~~-~--i~~~~~~-~~~~i~~~t-- 93 (174)
T d1f8fa2 24 LKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR---LELAKQLGATH-V--INSKTQD-PVAAIKEIT-- 93 (174)
T ss_dssp TCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH---HHHHHHHTCSE-E--EETTTSC-HHHHHHHHT--
T ss_pred hCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHH---HHHHHHcCCeE-E--EeCCCcC-HHHHHHHHc--
Confidence 34678999999987 8999999999988999998888776533 33344556532 2 3444433 333333332
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
-+.+|.+|.+.|..
T Consensus 94 ~gg~D~vid~~G~~ 107 (174)
T d1f8fa2 94 DGGVNFALESTGSP 107 (174)
T ss_dssp TSCEEEEEECSCCH
T ss_pred CCCCcEEEEcCCcH
Confidence 25799999999853
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=94.65 E-value=0.023 Score=54.31 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=55.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|.|+ ||+|...++++...|+.+|+.+.+++.. .+..++.|.... +|..+++..++ +.++.. .
T Consensus 24 ~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r---~~~a~~lGa~~~---i~~~~~~~~~~-v~~~t~-g 94 (174)
T d1jqba2 24 DIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPIC---VEAAKFYGATDI---LNYKNGHIEDQ-VMKLTN-G 94 (174)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHH---HHHHHHHTCSEE---ECGGGSCHHHH-HHHHTT-T
T ss_pred CCCCCCEEEEEcC-Ccchhhhhhhhhcccccccccccchhhh---HHHHHhhCcccc---ccccchhHHHH-HHHHhh-c
Confidence 4678899999975 8999999999999999888877776533 333445575432 34444333332 222211 2
Q ss_pred CCccEEEEcCccc
Q psy612 144 GPIDGVLHIAGIS 156 (1005)
Q Consensus 144 g~idgvIh~AG~~ 156 (1005)
..+|.+|.++|..
T Consensus 95 ~G~D~vid~~g~~ 107 (174)
T d1jqba2 95 KGVDRVIMAGGGS 107 (174)
T ss_dssp SCEEEEEECSSCT
T ss_pred cCcceEEEccCCH
Confidence 3599999999864
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.64 E-value=0.057 Score=51.22 Aligned_cols=84 Identities=14% Similarity=0.099 Sum_probs=58.5
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~ 141 (1005)
..++++.+++|.|+ ||+|...++.+...|+++|+.+.+++...++.++ .|..-.+ |..+ .+.+.+.+....
T Consensus 24 ~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~---lGa~~~i---~~~~~~~~~~~~~~~~~- 95 (176)
T d2fzwa2 24 AKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE---FGATECI---NPQDFSKPIQEVLIEMT- 95 (176)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH---HTCSEEE---CGGGCSSCHHHHHHHHT-
T ss_pred hCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH---hCCcEEE---eCCchhhHHHHHHHHHc-
Confidence 45789999999987 6899999999999999999998887755554444 4654332 2221 233444444432
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
.+.+|.+|.+.|.
T Consensus 96 -~~g~D~vid~~G~ 108 (176)
T d2fzwa2 96 -DGGVDYSFECIGN 108 (176)
T ss_dssp -TSCBSEEEECSCC
T ss_pred -CCCCcEeeecCCC
Confidence 3479999999875
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.63 E-value=0.022 Score=55.10 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=52.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
++++||+||+||+|...++..-..|+++|+.+.+++. +.....+..|.... .|..+++ +.+.+.++.. ..+|
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e--~~~~l~~~~gad~v---i~~~~~~-~~~~~~~~~~--~GvD 102 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE--KCLFLTSELGFDAA---VNYKTGN-VAEQLREACP--GGVD 102 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHH--HHHHHHHHSCCSEE---EETTSSC-HHHHHHHHCT--TCEE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHH--HHhhhhhcccceEE---eeccchh-HHHHHHHHhc--cCce
Confidence 3899999999999999998877789988887666532 22222334565533 3555433 3344444432 3699
Q ss_pred EEEEcCc
Q psy612 148 GVLHIAG 154 (1005)
Q Consensus 148 gvIh~AG 154 (1005)
.||.+.|
T Consensus 103 vv~D~vG 109 (187)
T d1vj1a2 103 VYFDNVG 109 (187)
T ss_dssp EEEESSC
T ss_pred EEEecCC
Confidence 9999886
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.51 E-value=0.054 Score=51.34 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=56.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|.|+ |++|...+..+...|+.+++.+.+++. ..+.+++.|.... + |-.+ +.++...+.. ..
T Consensus 29 ~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~---k~~~~~~~ga~~~-i--~~~~-~~~~~~~~~~--~~ 98 (172)
T d1h2ba2 29 TLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE---KLKLAERLGADHV-V--DARR-DPVKQVMELT--RG 98 (172)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH---HHHHHHHTTCSEE-E--ETTS-CHHHHHHHHT--TT
T ss_pred ccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH---HHHHHhhccccee-e--cCcc-cHHHHHHHhh--CC
Confidence 3578899999885 999999999998899998888877652 3445556675432 2 3332 3444444332 12
Q ss_pred CCccEEEEcCccc
Q psy612 144 GPIDGVLHIAGIS 156 (1005)
Q Consensus 144 g~idgvIh~AG~~ 156 (1005)
..+|.+|.++|..
T Consensus 99 ~g~d~vid~~g~~ 111 (172)
T d1h2ba2 99 RGVNVAMDFVGSQ 111 (172)
T ss_dssp CCEEEEEESSCCH
T ss_pred CCceEEEEecCcc
Confidence 3699999999853
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=94.48 E-value=0.034 Score=53.01 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=59.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.+++|.|+ ||+|...+.++...|+.+|+.+.+++...++. ++.|..-.+...|-. +.+.+..+...
T Consensus 24 ~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a---~~~Ga~~~i~~~~~~--~~~~~~~~~~~-- 95 (176)
T d2jhfa2 24 AKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA---KEVGATECVNPQDYK--KPIQEVLTEMS-- 95 (176)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---HHTTCSEEECGGGCS--SCHHHHHHHHT--
T ss_pred hCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH---HHhCCeeEEecCCch--hHHHHHHHHHh--
Confidence 45789999999998 78999999999999999999988887544433 445654333222222 23344444432
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
.+.+|.+|-+.|..
T Consensus 96 ~~G~D~vid~~G~~ 109 (176)
T d2jhfa2 96 NGGVDFSFEVIGRL 109 (176)
T ss_dssp TSCBSEEEECSCCH
T ss_pred cCCCCEEEecCCch
Confidence 35799999998864
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=94.34 E-value=0.062 Score=51.19 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=58.5
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~ 141 (1005)
..++++.+++|.| .||||...+..+...|+++|+++..++...++. ++.|....+ |... ++.++......
T Consensus 24 a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a---~~~Ga~~~i---~~~~~~~~~~~~~~~~-- 94 (174)
T d1e3ia2 24 AKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA---KALGATDCL---NPRELDKPVQDVITEL-- 94 (174)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---HHTTCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred hCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH---HHhCCCccc---CCccchhhhhhhHhhh--
Confidence 4567899999996 599999999999999999999888877544443 345654432 2221 12333333333
Q ss_pred hcCCccEEEEcCccc
Q psy612 142 NIGPIDGVLHIAGIS 156 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~ 156 (1005)
..+.+|.+|.++|..
T Consensus 95 ~~~G~d~vie~~G~~ 109 (174)
T d1e3ia2 95 TAGGVDYSLDCAGTA 109 (174)
T ss_dssp HTSCBSEEEESSCCH
T ss_pred hcCCCcEEEEecccc
Confidence 235899999999863
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.17 E-value=0.068 Score=50.98 Aligned_cols=86 Identities=17% Similarity=0.092 Sum_probs=57.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.+++|.|+ ||+|+..+..+...|+.+||.+.+++...+..++ .|....+ |-.+.+...+.+.+.. .
T Consensus 25 ~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~---~GA~~~i---n~~~~~~~~~~~~~~~-~ 96 (176)
T d1d1ta2 25 GKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA---VGATECI---SPKDSTKPISEVLSEM-T 96 (176)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---HTCSEEE---CGGGCSSCHHHHHHHH-H
T ss_pred hCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh---cCCcEEE---CccccchHHHHHHHHh-c
Confidence 34778999999985 9999999999999999999888887655444444 4665443 2222221112222221 2
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
.+.+|.+|.+.|..
T Consensus 97 g~G~d~vi~~~g~~ 110 (176)
T d1d1ta2 97 GNNVGYTFEVIGHL 110 (176)
T ss_dssp TSCCCEEEECSCCH
T ss_pred cccceEEEEeCCch
Confidence 34799999998753
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.14 E-value=0.054 Score=50.78 Aligned_cols=72 Identities=14% Similarity=0.317 Sum_probs=50.2
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 145 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~ 145 (1005)
.++.++|.|+ |++|..++++|..+|...+.++.|+. ...++.+ ..+.++. ++ +++. +....
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~---~~~~~~~----~~---~~~~-------~~l~~ 84 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR---DLGGEAV----RF---DELV-------DHLAR 84 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH---HHTCEEC----CG---GGHH-------HHHHT
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH---hhhcccc----cc---hhHH-------HHhcc
Confidence 6789999997 99999999999999999999999984 2233333 3343321 22 2222 22236
Q ss_pred ccEEEEcCccc
Q psy612 146 IDGVLHIAGIS 156 (1005)
Q Consensus 146 idgvIh~AG~~ 156 (1005)
.|+||.+.+..
T Consensus 85 ~Divi~atss~ 95 (159)
T d1gpja2 85 SDVVVSATAAP 95 (159)
T ss_dssp CSEEEECCSSS
T ss_pred CCEEEEecCCC
Confidence 89999998753
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.09 E-value=0.032 Score=45.52 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=31.5
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 103 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~ 103 (1005)
.+++.++||+||+||+|....+.+...|++++..+++.+
T Consensus 29 ~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~ 67 (77)
T d1o8ca2 29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67 (77)
T ss_dssp CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred ccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence 457889999999999999999877778887666665543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.90 E-value=0.037 Score=52.97 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=51.7
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
..+++.++||+||+||+|....+.....|++++..+++.+.. +.+++.|....+ |-.+. ..+.+..+ .-
T Consensus 28 ~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~----~~~~~lGa~~vi---~~~~~--~~~~~~~~--~~ 96 (176)
T d1xa0a2 28 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----DYLRVLGAKEVL---AREDV--MAERIRPL--DK 96 (176)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----HHHHHTTCSEEE---ECC-----------C--CS
T ss_pred CCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH----HHHHhcccceee---ecchh--HHHHHHHh--hc
Confidence 345788999999999999998888778899887776665542 334556766443 22221 12222222 23
Q ss_pred CCccEEEEcCcc
Q psy612 144 GPIDGVLHIAGI 155 (1005)
Q Consensus 144 g~idgvIh~AG~ 155 (1005)
+++|.||.+.|-
T Consensus 97 ~gvD~vid~vgg 108 (176)
T d1xa0a2 97 QRWAAAVDPVGG 108 (176)
T ss_dssp CCEEEEEECSTT
T ss_pred cCcCEEEEcCCc
Confidence 489999999874
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=93.79 E-value=0.07 Score=50.77 Aligned_cols=84 Identities=17% Similarity=0.087 Sum_probs=57.7
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHH-HHHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL-KMISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~-~v~~~~~~i~~ 141 (1005)
..++++.+++|.|+ ||+|...++.+...|+++|+.+.+++...+.. ++.|....+ |.++.+ .+.+.....
T Consensus 23 a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a---~~lGa~~~i---~~~~~d~~~~~~~~~~-- 93 (174)
T d1p0fa2 23 AKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA---IELGATECL---NPKDYDKPIYEVICEK-- 93 (174)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH---HHTTCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred hCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH---HHcCCcEEE---cCCCchhHHHHHHHHh--
Confidence 45789999999985 99999999999999999999888876544433 455765443 333222 123333222
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
.-+.+|.+|-+.|.
T Consensus 94 ~~~G~d~vid~~g~ 107 (174)
T d1p0fa2 94 TNGGVDYAVECAGR 107 (174)
T ss_dssp TTSCBSEEEECSCC
T ss_pred cCCCCcEEEEcCCC
Confidence 23579999999875
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=93.58 E-value=0.086 Score=49.66 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=54.4
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.+++|.|+ |+||...++.+...|++++++.++.+. .+. +++.|.... .|..+.+... ..
T Consensus 26 ~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~-~~~---a~~lGad~~---i~~~~~~~~~-------~~ 90 (168)
T d1uufa2 26 WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK-REA---AKALGADEV---VNSRNADEMA-------AH 90 (168)
T ss_dssp TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG-HHH---HHHHTCSEE---EETTCHHHHH-------TT
T ss_pred hCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhH-HHH---HhccCCcEE---EECchhhHHH-------Hh
Confidence 34678999999986 899999998888889988876655443 233 344566533 3666654322 22
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
...+|.+|.+.|..
T Consensus 91 ~~~~D~vid~~g~~ 104 (168)
T d1uufa2 91 LKSFDFILNTVAAP 104 (168)
T ss_dssp TTCEEEEEECCSSC
T ss_pred cCCCceeeeeeecc
Confidence 35799999999864
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.17 E-value=0.1 Score=49.34 Aligned_cols=84 Identities=17% Similarity=0.164 Sum_probs=56.8
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIIN 141 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~-v~~~~~~i~~ 141 (1005)
..++++.+++|.|+ ||+|...+..+...|+.+|+.+.+++...+ ..++.|....+ |.++++. +.+.....
T Consensus 24 a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~---~a~~~GAd~~i---n~~~~~~~~~~~~~~~-- 94 (175)
T d1cdoa2 24 AKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE---KAKVFGATDFV---NPNDHSEPISQVLSKM-- 94 (175)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH---HHHHTTCCEEE---CGGGCSSCHHHHHHHH--
T ss_pred hCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH---HHHHcCCcEEE---cCCCcchhHHHHHHhh--
Confidence 35789999999985 778889999999999999998888765433 34456764433 3333222 22333322
Q ss_pred hcCCccEEEEcCcc
Q psy612 142 NIGPIDGVLHIAGI 155 (1005)
Q Consensus 142 ~~g~idgvIh~AG~ 155 (1005)
.-+.+|.+|-+.|.
T Consensus 95 ~~~G~d~vid~~G~ 108 (175)
T d1cdoa2 95 TNGGVDFSLECVGN 108 (175)
T ss_dssp HTSCBSEEEECSCC
T ss_pred ccCCcceeeeecCC
Confidence 22479999999985
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.02 E-value=0.12 Score=50.16 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=57.3
Q ss_pred ccccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy612 63 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 142 (1005)
Q Consensus 63 ~~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 142 (1005)
..++++.+++|.|+ |++|+..+......|+.+|+.+.+++. ..+..++.|.... .|-.+ +++.+.+.++. .
T Consensus 21 a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~---rl~~a~~~Ga~~~---~~~~~-~~~~~~i~~~t-~ 91 (195)
T d1kola2 21 AGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA---RLAHAKAQGFEIA---DLSLD-TPLHEQIAALL-G 91 (195)
T ss_dssp TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHTTCEEE---ETTSS-SCHHHHHHHHH-S
T ss_pred hCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch---hhHhhhhccccEE---EeCCC-cCHHHHHHHHh-C
Confidence 35788999999985 899999998888889988888877643 3344556676542 23333 23333333332 2
Q ss_pred cCCccEEEEcCccc
Q psy612 143 IGPIDGVLHIAGIS 156 (1005)
Q Consensus 143 ~g~idgvIh~AG~~ 156 (1005)
-...|.+|.+.|..
T Consensus 92 g~g~D~vid~vG~~ 105 (195)
T d1kola2 92 EPEVDCAVDAVGFE 105 (195)
T ss_dssp SSCEEEEEECCCTT
T ss_pred CCCcEEEEECcccc
Confidence 34699999999853
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.38 E-value=0.21 Score=46.83 Aligned_cols=80 Identities=14% Similarity=0.030 Sum_probs=50.9
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|.|+ |++|...++.+...|++++++ .+++...+ ..++.|....+..-+-.+ +. ....
T Consensus 24 ~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~-~~~~~k~~---~a~~lGa~~~i~~~~~~~------~~---~~~~ 89 (168)
T d1piwa2 24 GCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVI-SRSSRKRE---DAMKMGADHYIATLEEGD------WG---EKYF 89 (168)
T ss_dssp TCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE-ESSSTTHH---HHHHHTCSEEEEGGGTSC------HH---HHSC
T ss_pred CcCCCCEEEEECC-CCcchhHHHHhhhcccccccc-ccchhHHH---HhhccCCcEEeeccchHH------HH---Hhhh
Confidence 4678999999986 899999998887889876554 44443222 344557654332222222 11 1234
Q ss_pred CCccEEEEcCcccC
Q psy612 144 GPIDGVLHIAGISG 157 (1005)
Q Consensus 144 g~idgvIh~AG~~~ 157 (1005)
+..|.+|.+.|...
T Consensus 90 ~~~d~vi~~~~~~~ 103 (168)
T d1piwa2 90 DTFDLIVVCASSLT 103 (168)
T ss_dssp SCEEEEEECCSCST
T ss_pred cccceEEEEecCCc
Confidence 57899999887644
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.78 E-value=0.31 Score=44.76 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHH
Q psy612 736 ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 815 (1005)
Q Consensus 736 ~~q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~ 815 (1005)
....++|+++|+++|++++||+|+..|-.+ ..=++++.+.++-.. .+ .... +=...||+-+|+=...|..
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~--ek-~~~~-~~~~~GNt~sasip~~L~~- 117 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRP--DA-VVAN-DIEHTGNTSAASIPLAMAE- 117 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCT--TC-EECC-THHHHCBCGGGHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCc--hh-hhhh-hHHhhCCCccchHHHHHHH-
Confidence 344578999999999999999999999554 345667777776322 11 2221 2235689888875555443
Q ss_pred HHHhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 816 VQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 816 ~l~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+++.+.+.| ..+..+.+||.|=+-+++||+
T Consensus 118 --a~~~g~i~~---------------------------------Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 118 --LLTTGAAKP---------------------------------GDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp --HHHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred --HHHcCCCCC---------------------------------CCEEEEEEEchhhhheEEEEe
Confidence 444443322 124467789988888888875
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=91.10 E-value=0.12 Score=48.72 Aligned_cols=77 Identities=17% Similarity=0.256 Sum_probs=49.9
Q ss_pred ccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh--
Q psy612 65 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-- 142 (1005)
Q Consensus 65 ~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-- 142 (1005)
.++++++||+||+||+|...++.....|++++..+++.+.. +.+++.|....+.. + ....+....
T Consensus 21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~----~~~~~lGad~vi~~------~---~~~~~~~~~~~ 87 (167)
T d1tt7a2 21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA----DYLKQLGASEVISR------E---DVYDGTLKALS 87 (167)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH----HHHHHHTCSEEEEH------H---HHCSSCCCSSC
T ss_pred CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH----HHHHhhcccceEec------c---chhchhhhccc
Confidence 34567899999999999999988778899877777765542 33455576644321 1 111111111
Q ss_pred cCCccEEEEcCc
Q psy612 143 IGPIDGVLHIAG 154 (1005)
Q Consensus 143 ~g~idgvIh~AG 154 (1005)
-+++|.||.+.|
T Consensus 88 ~~gvd~vid~vg 99 (167)
T d1tt7a2 88 KQQWQGAVDPVG 99 (167)
T ss_dssp CCCEEEEEESCC
T ss_pred CCCceEEEecCc
Confidence 247999999876
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=90.50 E-value=0.4 Score=44.68 Aligned_cols=74 Identities=22% Similarity=0.191 Sum_probs=49.2
Q ss_pred CCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 68 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 68 ~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
.|.++|.|+ |.+|+.+|++|+++|.. |++..|+.. ..+++.+..........+..+.......+ ...|
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~-V~v~dr~~~---~a~~l~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~ 69 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIK-VTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEV-------AKHD 69 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCE-EEEEESCHH---HHHHHHTTCTTEEEEECCTTCHHHHHHHH-------TTSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEECChH---HHHHHHhcccccccccccccchhhhHhhh-------hccc
Confidence 578999876 99999999999999985 666666642 33445444445555666777765554443 2456
Q ss_pred EEEEcC
Q psy612 148 GVLHIA 153 (1005)
Q Consensus 148 gvIh~A 153 (1005)
.++.+.
T Consensus 70 ~~i~~~ 75 (182)
T d1e5qa1 70 LVISLI 75 (182)
T ss_dssp EEEECS
T ss_pred eeEeec
Confidence 666543
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=90.39 E-value=0.18 Score=45.30 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=49.1
Q ss_pred CEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 69 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 69 ~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
|.|+|.|. |-+|+.+|+.|.++|..++++..+ ++..++++..+.. ++..|.++++.+.++ .....|.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d----~~~~~~~~~~~~~--~~~gd~~~~~~l~~a------~i~~a~~ 67 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN----EEKVNAYASYATH--AVIANATEENELLSL------GIRNFEY 67 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESC----HHHHHHTTTTCSE--EEECCTTCTTHHHHH------TGGGCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCc----HHHHHHHHHhCCc--ceeeecccchhhhcc------CCccccE
Confidence 45888865 789999999999999987777543 3445556555654 455899998765543 1124566
Q ss_pred EEEcC
Q psy612 149 VLHIA 153 (1005)
Q Consensus 149 vIh~A 153 (1005)
+|-+.
T Consensus 68 vi~~~ 72 (134)
T d2hmva1 68 VIVAI 72 (134)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 66544
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=89.96 E-value=0.47 Score=46.68 Aligned_cols=68 Identities=18% Similarity=0.257 Sum_probs=48.4
Q ss_pred ChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEEEEcCcc
Q psy612 76 GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGI 155 (1005)
Q Consensus 76 g~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgvIh~AG~ 155 (1005)
.||-.|.++|+.+..+|+.+.++.+...... ...+.. ..+.+.+++...+.... ...|++|++|.+
T Consensus 30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~---------p~~~~~--~~~~t~~~m~~~~~~~~---~~~D~~i~aAAv 95 (223)
T d1u7za_ 30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT---------PPFVKR--VDVMTALEMEAAVNASV---QQQNIFIGCAAV 95 (223)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC---------CTTEEE--EECCSHHHHHHHHHHHG---GGCSEEEECCBC
T ss_pred CcHHHHHHHHHHHHHcCCchhhhhcccccCc---------cccccc--ceehhhHHHHHHHHhhh---ccceeEeeeech
Confidence 4678999999999999999988888654210 112333 35567777766665543 457999999998
Q ss_pred cC
Q psy612 156 SG 157 (1005)
Q Consensus 156 ~~ 157 (1005)
..
T Consensus 96 sD 97 (223)
T d1u7za_ 96 AD 97 (223)
T ss_dssp CS
T ss_pred hh
Confidence 75
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.94 E-value=0.67 Score=42.90 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=48.5
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 143 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~ 143 (1005)
.++++.+++|.|+ |++|+..++.+...|+ +++.+.+++ +..+..++.|.... .|.++.+..+.+. +..
T Consensus 24 ~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~---~~~~~a~~~Ga~~~---i~~~~~~~~~~~~----~~~ 91 (166)
T d1llua2 24 NARPGQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDD---AKLELARKLGASLT---VNARQEDPVEAIQ----RDI 91 (166)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCH---HHHHHHHHTTCSEE---EETTTSCHHHHHH----HHH
T ss_pred CCCCCCEEEEeec-cccHHHHHHHHHHcCC-ccceecchh---hHHHhhhccCcccc---ccccchhHHHHHH----Hhh
Confidence 4678999999876 9999999988878886 455555553 23344556676543 2555544433332 233
Q ss_pred CCccEEEEcCc
Q psy612 144 GPIDGVLHIAG 154 (1005)
Q Consensus 144 g~idgvIh~AG 154 (1005)
+..+.+|-+++
T Consensus 92 ~g~~~~i~~~~ 102 (166)
T d1llua2 92 GGAHGVLVTAV 102 (166)
T ss_dssp SSEEEEEECCS
T ss_pred cCCcccccccc
Confidence 44555555554
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=89.33 E-value=0.17 Score=48.19 Aligned_cols=49 Identities=24% Similarity=0.327 Sum_probs=35.8
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcE
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA 119 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v 119 (1005)
.++++||+||+||+|....+.....|++++.++++.+. . +.+++.|...
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k-~---~~~~~lGad~ 79 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST-H---EYLKSLGASR 79 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-H---HHHHHHTEEE
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH-H---HHHHhhcccc
Confidence 45689999999999999888888889987776665543 2 2334456543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.66 E-value=0.25 Score=44.25 Aligned_cols=70 Identities=21% Similarity=0.195 Sum_probs=46.4
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.++|.|+ |-+|+.+++.|.++|..++++.... +..+++.... .+.++..|.+|++-++++ .....|.+
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~----~~~~~~~~~~-~~~vi~Gd~~~~~~l~~~------~i~~a~~v 69 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK----DICKKASAEI-DALVINGDCTKIKTLEDA------GIEDADMY 69 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHC-SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCCh----hhhhhhhhhh-hhhhccCcccchhhhhhc------Chhhhhhh
Confidence 3677776 8999999999999998776664433 3344444331 245778999998765533 22345666
Q ss_pred EE
Q psy612 150 LH 151 (1005)
Q Consensus 150 Ih 151 (1005)
+-
T Consensus 70 v~ 71 (132)
T d1lssa_ 70 IA 71 (132)
T ss_dssp EE
T ss_pred cc
Confidence 65
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=88.46 E-value=0.78 Score=42.93 Aligned_cols=74 Identities=15% Similarity=0.215 Sum_probs=48.8
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.+++.++|.|+ ||-+++++..|.+. ...|.+..|+. ..+.+.+.+...+ .+.....|-. ...
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~~ 78 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PLQ 78 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CCS
T ss_pred CCCCEEEEECC-cHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------ccc
Confidence 36788888875 77899999999874 56788888874 3344444454333 4444443321 235
Q ss_pred CccEEEEcCccc
Q psy612 145 PIDGVLHIAGIS 156 (1005)
Q Consensus 145 ~idgvIh~AG~~ 156 (1005)
..|+|||+..+.
T Consensus 79 ~~diiIN~tp~g 90 (171)
T d1p77a1 79 TYDLVINATSAG 90 (171)
T ss_dssp CCSEEEECCCC-
T ss_pred ccceeeeccccc
Confidence 789999998654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=87.49 E-value=0.7 Score=42.20 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=51.0
Q ss_pred EEEEECChhHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 149 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idgv 149 (1005)
.++|.|. |-+|..+++.|.++|..++++....+...+..+++... .+.++..|.+|++-++++ .....+.+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a------~i~~a~~v 75 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKA------GIDRCRAI 75 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHH------TTTTCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHh------ccccCCEE
Confidence 4677776 78999999999999988777765544444444444443 367788999998755432 22356777
Q ss_pred EEcC
Q psy612 150 LHIA 153 (1005)
Q Consensus 150 Ih~A 153 (1005)
|-..
T Consensus 76 i~~~ 79 (153)
T d1id1a_ 76 LALS 79 (153)
T ss_dssp EECS
T ss_pred EEcc
Confidence 6544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=86.26 E-value=0.73 Score=43.00 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=48.2
Q ss_pred cCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCCC-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy612 66 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 144 (1005)
Q Consensus 66 ~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~~-~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g 144 (1005)
.++|.+||.|+ ||-+++++..|.+.|++ |.+..|+. ..+++.+.+...+ .+..+..| + ....
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~-i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~------------~~~~ 78 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCA-VTITNRTVSRAEELAKLFAHTG-SIQALSMD--E------------LEGH 78 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE-EEEECSSHHHHHHHHHHTGGGS-SEEECCSG--G------------GTTC
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceE-EEeccchHHHHHHHHHHHhhcc-cccccccc--c------------cccc
Confidence 36789999996 78899999999999985 77777774 3334444444333 23332221 1 1124
Q ss_pred CccEEEEcCccc
Q psy612 145 PIDGVLHIAGIS 156 (1005)
Q Consensus 145 ~idgvIh~AG~~ 156 (1005)
..|+|||+.-+.
T Consensus 79 ~~dliIN~Tp~G 90 (170)
T d1nyta1 79 EFDLIINATSSG 90 (170)
T ss_dssp CCSEEEECCSCG
T ss_pred ccceeecccccC
Confidence 689999987543
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.16 E-value=7.3 Score=34.86 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=64.9
Q ss_pred EEEECChhHHHHHHHHHHHHc-C-CcEEEEecCCCchHHHHHHHHhCCCcEE-EEEecCCCHHHHHHHHHHHHhhcCCcc
Q psy612 71 YLITGGTGRLGMLFSDYLINK-Y-STNLILSGRSKLNSIIYKKLKKFNNKAI-YIQVDVSDKLKMISEINSIINNIGPID 147 (1005)
Q Consensus 71 ~lITGg~gGIG~aiA~~La~~-G-a~~vil~~r~~~~~~~~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~~~i~~~~g~id 147 (1005)
+.|+|++|.+|..+|..|+.+ + +..+++....+..+...-.|........ .....-.+.+++ -.-|
T Consensus 3 V~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~aD 71 (145)
T d2cmda1 3 VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EGAD 71 (145)
T ss_dssp EEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TTCS
T ss_pred EEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCcccc-----------CCCC
Confidence 679999999999999988754 4 5678888766544444445654332221 112233343322 2579
Q ss_pred EEEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy612 148 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS 209 (1005)
Q Consensus 148 gvIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SSi 209 (1005)
+||..||... .. .++.. ..+..|..-...+.+. +.+ ..+...+|++|.-
T Consensus 72 vvvitaG~~~-k~---g~~R~---dl~~~N~~i~~~v~~~----i~~--~~p~aivivvtNP 120 (145)
T d2cmda1 72 VVLISAGVRR-KP---GMDRS---DLFNVNAGIVKNLVQQ----VAK--TCPKACIGIITNP 120 (145)
T ss_dssp EEEECCSCCC-CT---TCCGG---GGHHHHHHHHHHHHHH----HHH--HCTTSEEEECSSS
T ss_pred EEEECCCccC-CC---Ccchh---hHHHHHHHHHHHHHHH----HHh--hCCCcEEEEccCC
Confidence 9999999865 21 12222 2344454443333433 322 2355667777653
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=84.93 E-value=0.82 Score=42.18 Aligned_cols=37 Identities=22% Similarity=0.091 Sum_probs=28.2
Q ss_pred cccCCCEEEEECChhHHHHHHHHHHHHcCCcEEEEecCC
Q psy612 64 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS 102 (1005)
Q Consensus 64 ~~~~~~~~lITGg~gGIG~aiA~~La~~Ga~~vil~~r~ 102 (1005)
.++++.++||.|+ |++|...++.+...|+++++ +.++
T Consensus 24 ~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~-~~~~ 60 (168)
T d1rjwa2 24 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVA-VDIG 60 (168)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEE-ECSC
T ss_pred CCCCCCEEEEeec-ccchhhhhHHHhcCCCeEec-cCCC
Confidence 3668899999865 99999988888888886444 4444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=84.36 E-value=5.3 Score=35.88 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=47.4
Q ss_pred CCCEEEEECChhHHHHHHHHHHHHcC-CcEEEEecCCCc-hHHHHHHHHh---CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy612 67 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKL-NSIIYKKLKK---FNNKAIYIQVDVSDKLKMISEINSIIN 141 (1005)
Q Consensus 67 ~~~~~lITGg~gGIG~aiA~~La~~G-a~~vil~~r~~~-~~~~~~~l~~---~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 141 (1005)
..+.+.|.|+ |.+|..+|..|+.+| +..++++.+.+. .+.....+.. ..........|. +
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--------------~ 68 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--------------S 68 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--------------G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--------------H
Confidence 3456778885 899999999999998 467888887643 2222333432 122233333332 2
Q ss_pred hcCCccEEEEcCcccC
Q psy612 142 NIGPIDGVLHIAGISG 157 (1005)
Q Consensus 142 ~~g~idgvIh~AG~~~ 157 (1005)
....-|+||.+||...
T Consensus 69 ~~~~adivvitag~~~ 84 (146)
T d1ez4a1 69 DCKDADLVVITAGAPQ 84 (146)
T ss_dssp GGTTCSEEEECCCC--
T ss_pred HhccccEEEEeccccc
Confidence 2346799999999754
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=82.80 E-value=1.7 Score=39.45 Aligned_cols=96 Identities=23% Similarity=0.188 Sum_probs=60.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHHH
Q psy612 739 TELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQS 818 (1005)
Q Consensus 739 ~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l~ 818 (1005)
.++|+++|+++|++++||+|+-.|-.+- .=++.+.+.++-.. ...+ -.+ .+.||+-+|+=...|. ..
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~-----~~~~~i~~~lgi~~---~k~~-~~~-~~~Gn~~sasip~~L~---~~ 116 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANL-----RIIDAARERLGLPW---ERVA-VNV-DRYGNTSTASIPLALK---EA 116 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHTTTCCG---GGBC-CCH-HHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHhhccccccccEEEeeccch-----HHHHHHHhhccchh---hHHH-HHH-HHhcCCcchhHHHHHH---HH
Confidence 4788999999999999999999995443 33444555444221 1111 122 3568888877544432 23
Q ss_pred hhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 819 IKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 819 l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
++.+.+.| ....++.+||.|-+-+.++|+
T Consensus 117 ~~~~~~~~---------------------------------Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 117 VDAGRIRE---------------------------------GDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp HHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCCCC---------------------------------CCEEEEEEEchHhhhEEEEEE
Confidence 34433322 134578899998888888876
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=82.60 E-value=1.6 Score=39.40 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccCCCCCCceeEeccCCCcCchhhchhhHHHHHHHH
Q psy612 738 QTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQ 817 (1005)
Q Consensus 738 q~~~i~~al~~agi~~~~I~yve~hgtgt~~gD~~E~~al~~~~~~~~~~~~~~~igsvK~~iGH~~~AaG~~~lik~~l 817 (1005)
..++++++|+++|++++||+|+-.|-.+.. =++++.+.++-... .++ ..-.++||+-+|+=...|-.
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~-----~~~~~~~~l~l~~~---k~~--~~~~~~GN~~sasip~~L~~--- 112 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLR-----IISATAKKLGMSMD---NVV--VTLDRHGNTSAASVPCALDE--- 112 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHH-----HHHHHHHHTTCCGG---GBC--CCHHHHCBCGGGHHHHHHHH---
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchH-----HHHHHHHhCccchh---hhh--hhhhhhcccccchHHHHHHH---
Confidence 467899999999999999999999976543 33445555543221 122 12336799988875544433
Q ss_pred HhhcCCCCCCCCCCCcccccccCCCCeeeccccccccccccCccEEEEcccCCCCceEEEEEe
Q psy612 818 SIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 880 (1005)
Q Consensus 818 ~l~~~~ipp~~~~~~~n~~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 880 (1005)
+++.+.+-| ....++.+||.|=+-++++|+
T Consensus 113 ~~~~~~~~~---------------------------------Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 113 AVRDGRIKP---------------------------------GQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp HHHTTCSCT---------------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred HHHhCCCCC---------------------------------CCEEEEEEEehhhhhEEEEEE
Confidence 333332211 124467889998888888875
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.51 E-value=6.2 Score=35.27 Aligned_cols=116 Identities=15% Similarity=0.173 Sum_probs=62.9
Q ss_pred EEEEECChhHHHHHHHHHHHHcCC-cEEEEecCCCchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q psy612 70 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 148 (1005)
Q Consensus 70 ~~lITGg~gGIG~aiA~~La~~Ga-~~vil~~r~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~~g~idg 148 (1005)
.+.|+|++|.+|..+|..|+.+|. ..+++....+. +.....+...... .....-+. ..+.. +....-|+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~-~~~a~Dl~~~~~~-~~~~~~~~-~~~~~-------~~~~~aDi 71 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLSHIETR-ATVKGYLG-PEQLP-------DCLKGCDV 71 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHTTSSSS-CEEEEEES-GGGHH-------HHHTTCSE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc-chhhHHHhhhhhh-cCCCeEEc-CCChH-------HHhCCCCE
Confidence 478999999999999999999885 77888776542 2223344322211 11111111 11111 22346899
Q ss_pred EEEcCcccCccchhccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy612 149 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 208 (1005)
Q Consensus 149 vIh~AG~~~~~~~~~~~t~~~~~~~l~~kv~g~~~L~~~~~~~l~~~~~~~~~~iV~~SS 208 (1005)
||..||... . + .++.. ..+..|+.-...+.+. +++ ..+...|+++|.
T Consensus 72 vVitag~~~-~-~--g~sR~---~ll~~N~~i~~~i~~~----i~~--~~p~~iiivvtN 118 (144)
T d1mlda1 72 VVIPAGVPR-K-P--GMTRD---DLFNTNATIVATLTAA----CAQ--HCPDAMICIISN 118 (144)
T ss_dssp EEECCSCCC-C-T--TCCGG---GGHHHHHHHHHHHHHH----HHH--HCTTSEEEECSS
T ss_pred EEECCCcCC-C-C--CCCcc---hHHHHHHHHHHHHHHH----HHh--cCCCeEEEEecC
Confidence 999999754 1 1 12222 2345555544444444 322 234555666554
|