Query psy6130
Match_columns 295
No_of_seqs 252 out of 1805
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 18:24:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6130.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6130hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0708 XthA Exonuclease III [ 100.0 1.5E-54 3.4E-59 372.4 19.9 217 73-294 1-225 (261)
2 PRK13911 exodeoxyribonuclease 100.0 2.6E-51 5.7E-56 358.1 22.1 217 73-294 1-219 (250)
3 PRK11756 exonuclease III; Prov 100.0 2.4E-41 5.2E-46 299.8 22.3 217 73-294 1-232 (268)
4 TIGR00195 exoDNase_III exodeox 100.0 2.3E-39 5E-44 284.9 22.7 216 73-294 1-220 (254)
5 TIGR00633 xth exodeoxyribonucl 100.0 9.4E-37 2E-41 268.0 22.4 220 73-294 1-224 (255)
6 KOG1294|consensus 99.9 1.3E-25 2.9E-30 200.7 11.4 228 65-294 56-302 (335)
7 PRK05421 hypothetical protein; 99.8 5.3E-19 1.1E-23 156.2 17.1 147 69-224 40-195 (263)
8 TIGR03395 sphingomy sphingomye 99.7 1.4E-16 3E-21 142.0 16.6 151 73-226 1-192 (283)
9 PF03372 Exo_endo_phos: Endonu 99.7 5.1E-17 1.1E-21 139.7 4.7 145 76-227 1-172 (249)
10 KOG2756|consensus 99.7 1E-15 2.2E-20 130.0 11.5 191 69-293 96-306 (349)
11 COG3568 ElsH Metal-dependent h 99.6 4.6E-15 1E-19 128.0 12.1 150 72-229 9-182 (259)
12 PLN03144 Carbon catabolite rep 99.6 3.6E-14 7.8E-19 136.5 16.3 154 68-226 250-470 (606)
13 PTZ00297 pantothenate kinase; 99.6 7.4E-14 1.6E-18 146.5 19.2 151 68-223 6-207 (1452)
14 KOG2338|consensus 99.6 1.8E-14 3.8E-19 132.6 12.0 151 71-226 115-307 (495)
15 KOG3873|consensus 99.6 1.9E-15 4.1E-20 133.3 4.3 177 69-268 5-207 (422)
16 PRK15251 cytolethal distending 99.5 1E-12 2.2E-17 114.4 16.7 152 68-226 20-199 (271)
17 smart00476 DNaseIc deoxyribonu 99.2 5E-10 1.1E-14 99.0 14.7 144 71-225 16-190 (276)
18 COG3021 Uncharacterized protei 99.0 9E-10 1.9E-14 97.1 8.4 149 69-226 85-237 (309)
19 PF14529 Exo_endo_phos_2: Endo 98.8 3.8E-09 8.2E-14 81.5 4.3 91 174-294 1-93 (119)
20 COG5239 CCR4 mRNA deadenylase, 98.8 8.6E-09 1.9E-13 91.8 5.8 75 72-147 30-131 (378)
21 smart00128 IPPc Inositol polyp 98.7 7.9E-08 1.7E-12 86.9 10.9 149 72-225 4-195 (310)
22 KOG0620|consensus 98.0 6.1E-06 1.3E-10 75.7 4.0 79 72-152 19-120 (361)
23 KOG0566|consensus 97.3 0.0031 6.8E-08 63.1 12.0 151 69-224 535-727 (1080)
24 COG2374 Predicted extracellula 97.2 0.012 2.6E-07 57.9 14.6 188 66-274 457-716 (798)
25 PTZ00312 inositol-1,4,5-tripho 87.0 1.5 3.3E-05 39.0 5.5 54 173-226 81-143 (356)
26 PLN03191 Type I inositol-1,4,5 86.4 4.6 9.9E-05 39.7 8.9 53 172-225 420-483 (621)
27 KOG1294|consensus 85.3 2.1 4.5E-05 39.1 5.8 122 162-293 11-137 (335)
28 PLN03191 Type I inositol-1,4,5 84.9 0.88 1.9E-05 44.5 3.4 41 69-109 106-149 (621)
29 KOG1976|consensus 80.4 5.6 0.00012 35.6 6.3 56 172-227 169-233 (391)
30 KOG1387|consensus 56.7 9.4 0.0002 35.1 2.6 47 174-226 46-92 (465)
31 KOG0808|consensus 25.3 59 0.0013 28.6 2.4 21 91-111 105-125 (387)
32 COG5411 Phosphatidylinositol 5 23.9 1.1E+02 0.0023 29.1 4.0 51 172-225 165-220 (460)
33 cd07577 Ph0642_like Pyrococcus 21.9 1.3E+02 0.0028 25.9 4.1 39 73-111 2-41 (259)
No 1
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=100.00 E-value=1.5e-54 Score=372.37 Aligned_cols=217 Identities=38% Similarity=0.647 Sum_probs=197.8
Q ss_pred eEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEeccCceE
Q psy6130 73 FKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 73 lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~~~~~ 152 (295)
|||+||||+|++++..+ ++++|.+++|||||||||++...+++..... ..||+.++.. +++||+||||+||.++..+
T Consensus 1 mkI~SwNVNgiRar~~~-~~~~l~~~~pDVlclQEtK~~~~~fp~~~~~-~~GY~~~~~~-gqKgysGVailsr~~~~~v 77 (261)
T COG0708 1 MKIASWNVNGLRARLKK-LLDWLEEEQPDVLCLQETKAQDEQFPREELE-ALGYHHVFNH-GQKGYSGVAILSKKPPDDV 77 (261)
T ss_pred CeeEEEehhhHHHHHHH-HHHHHHHhCCCEEEEEecccCcccCCHhHHh-hCCceEEEec-CcCCcceEEEEEccCchhh
Confidence 79999999999999875 9999999999999999999999999988776 7899544443 6699999999999988888
Q ss_pred EecCCCCC-C-CCcceEEEEeCCEEEEEEecCCCCC-CcccHHHHHHHHHHHHHHHHhhc-CCCCEEEEccCCCCCCCCC
Q psy6130 153 TYGLGTKN-E-HYGRNCNSNIVNTFYIRKNVPNAGA-GLKTLDKRLEWDKLFHEHLVKLD-AEKPVILIGDLNVSHKPID 228 (295)
Q Consensus 153 ~~~~~~~~-~-~~~r~i~~~~~~~~l~~vy~p~~~~-~~~~~~~r~~~~~~l~~~l~~l~-~~~pvIl~GDFN~~~~~~D 228 (295)
..+++... + .++|+|.+++..++|+|+|+|++.. +.+++++++.|++.|..++..+. .+.|+|||||||+.|.++|
T Consensus 78 ~~g~~~~~~~d~e~R~I~a~~~~~~v~~~Y~PnG~~~~~~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iD 157 (261)
T COG0708 78 RRGFPGEEEDDEEGRVIEAEFDGFRVINLYFPNGSSIGLEKFDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEID 157 (261)
T ss_pred hcCCCCCccccccCcEEEEEECCEEEEEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcCCCEEEecccccCCchhc
Confidence 88887732 3 7899999999999999999999998 78899999999999999998874 4699999999999999999
Q ss_pred CCCCC---CCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 229 LANPT---TNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 229 ~~~~~---~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
+.+|+ .|.+.++|+++||++|+.|+++||+|+||.++|+... ||||+|+. +++..|.||| |||+
T Consensus 158 v~~~~~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p~~~~-YTwW~YR~-~~~~~n~G~RID~~l 225 (261)
T COG0708 158 VANPKKRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHPEPEK-YTWWDYRA-NAARRNRGWRIDYIL 225 (261)
T ss_pred ccCchhhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhhCCCCCc-cccccccc-chhhhcCceeEEEEE
Confidence 99997 7899999999999999999999999999999999884 99999999 9888889999 9986
No 2
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=100.00 E-value=2.6e-51 Score=358.12 Aligned_cols=217 Identities=43% Similarity=0.801 Sum_probs=195.9
Q ss_pred eEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEeccCceE
Q psy6130 73 FKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 73 lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~~~~~ 152 (295)
|||+||||+|+++...+.+.++|.+++|||||||||++....+. .. ..||+.|+...+..||+||||++|.++..+
T Consensus 1 mki~swNVNgir~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~~---~~-~~gY~~~~~~~~~kgy~GVAi~~k~~~~~v 76 (250)
T PRK13911 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNT---FE-FKGYFDFWNCAIKKGYSGVVTFTKKEPLSV 76 (250)
T ss_pred CEEEEEEeCChhHhhhhhHHHHHHhcCCCEEEEEeecccccccc---cc-cCCceEEEEecccCccceEEEEEcCCchhe
Confidence 79999999999998866799999999999999999999887653 22 679987775556789999999999988888
Q ss_pred EecCCCCCC-CCcceEEEEeCCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhcCCCCEEEEccCCCCCCCCCCCC
Q psy6130 153 TYGLGTKNE-HYGRNCNSNIVNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLDAEKPVILIGDLNVSHKPIDLAN 231 (295)
Q Consensus 153 ~~~~~~~~~-~~~r~i~~~~~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~~~~pvIl~GDFN~~~~~~D~~~ 231 (295)
..+++...+ .+||+|.++++.++|+|+|+|+++...+++++|..|+..|.+++..+..+.++|+|||||++|.++|..+
T Consensus 77 ~~~~~~~~~d~eGR~I~~~~~~~~l~nvY~Pn~~~~~~r~~~K~~~~~~~~~~l~~l~~~~~~Ii~GD~Nva~~~~D~~~ 156 (250)
T PRK13911 77 SYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLEN 156 (250)
T ss_pred EEcCCCCcccccCCEEEEEECCEEEEEEEecCCCCCCcchHHHHHHHHHHHHHHHhcccCCCEEEEccccCCCChhhccC
Confidence 777765544 7899999999999999999999988778999999999999999998766789999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 232 PTTNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 232 ~~~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
|+.+.+.+||+++||++|..+++.||+|+||.+||+..+.||||+++. +++.+|.||| |||+
T Consensus 157 ~~~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~~~~~yTww~~~~-~~~~~n~g~RIDyil 219 (250)
T PRK13911 157 PKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQ-QARDKNIGWRIDYFL 219 (250)
T ss_pred hhhcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCCCCCCCccCCCcC-CccccCCcceEEEEE
Confidence 998889999999999999999999999999999999655799999999 9999999999 9985
No 3
>PRK11756 exonuclease III; Provisional
Probab=100.00 E-value=2.4e-41 Score=299.80 Aligned_cols=217 Identities=27% Similarity=0.424 Sum_probs=174.8
Q ss_pred eEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEeccCceE
Q psy6130 73 FKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 73 lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~~~~~ 152 (295)
|||+||||+|++.... .+.++|++.+|||||||||+.....+...... ..||+.++. +..+++|||||||.++..+
T Consensus 1 mri~T~Nv~g~~~~~~-~i~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~-~~gy~~~~~--~~~~~~GvailSr~p~~~~ 76 (268)
T PRK11756 1 MKFVSFNINGLRARPH-QLEAIIEKHQPDVIGLQETKVHDEMFPLEEVE-ALGYHVFYH--GQKGHYGVALLSKQTPIAV 76 (268)
T ss_pred CEEEEEEcCCHHHHHH-HHHHHHHhcCCCEEEEEecccccccCCHHHHH-hcCCEEEEe--CCCCCCEEEEEECCChHHe
Confidence 7999999999987654 58999999999999999998776555544333 578976665 4567789999999988766
Q ss_pred EecCCCCCC-CCcceEEEEe----CCEEEEEEecCCCCCC--cccHHHHHHHHHHHHHHHHhh-cCCCCEEEEccCCCCC
Q psy6130 153 TYGLGTKNE-HYGRNCNSNI----VNTFYIRKNVPNAGAG--LKTLDKRLEWDKLFHEHLVKL-DAEKPVILIGDLNVSH 224 (295)
Q Consensus 153 ~~~~~~~~~-~~~r~i~~~~----~~~~l~~vy~p~~~~~--~~~~~~r~~~~~~l~~~l~~l-~~~~pvIl~GDFN~~~ 224 (295)
...++.... .+++++.+.+ ..+.++++|+|++... ..+..+|..|...|..++..+ ..+.|+|||||||+.+
T Consensus 77 ~~~~~~~~~~~~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~~~~~~pvIl~GDfN~~~ 156 (268)
T PRK11756 77 RKGFPTDDEEAQRRIIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETELSPDNPLLIMGDMNISP 156 (268)
T ss_pred EECCCCccccccCCEEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHHhccCCCEEEEeecccCC
Confidence 655543322 5688888776 3599999999987643 235567888999999888775 4578999999999999
Q ss_pred CCCCCCCCCCC------CCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 225 KPIDLANPTTN------TRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 225 ~~~D~~~~~~~------~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
.++|...+..+ .+.++|+++||+++..|++.||+|+||.++|+....||||+++. +++.+|.||| |||+
T Consensus 157 ~~~D~~~~~~~~~~~~~~~~~~~~~~er~~~~~l~~~~l~D~~R~~~p~~~~~~T~~~~~~-~~~~~~~g~RIDyi~ 232 (268)
T PRK11756 157 TDLDIGIGEENRKRWLRTGKCSFLPEEREWLDRLMDWGLVDTFRQLNPDVNDRFSWFDYRS-KGFDDNRGLRIDLIL 232 (268)
T ss_pred ChhhcCCcccChHHhcccCCccCCHHHHHHHHHHHhCCcEeehhhhCCCCCCcccCcCCcc-cccccCCceEEEEEE
Confidence 99998754433 34578999999999999988999999999998434799999999 9998999999 9985
No 4
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=100.00 E-value=2.3e-39 Score=284.93 Aligned_cols=216 Identities=37% Similarity=0.692 Sum_probs=181.2
Q ss_pred eEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEeccCceE
Q psy6130 73 FKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 73 lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~~~~~ 152 (295)
|||+||||+|++.... .++++|..++|||||||||+.....+...+.. ..||+.++.. ..++.||||+||.+++.+
T Consensus 1 mri~t~Ni~g~~~~~~-~~~~~l~~~~~DIi~LQE~~~~~~~~~~~~~~-~~g~~~~~~~--~~g~~Gvailsr~~~~~~ 76 (254)
T TIGR00195 1 MKIISWNVNGLRARLH-KGLAWLKENQPDVLCLQETKVQDEQFPLEPFH-KEGYHVFFSG--QKGYSGVAIFSKEEPLSV 76 (254)
T ss_pred CEEEEEEcCcHHHhHH-HHHHHHHhcCCCEEEEEecccchhhCCHHHhh-cCCcEEEEec--CCCcceEEEEEcCCcceE
Confidence 7999999999987654 48999999999999999998766555554444 5789777663 367789999999777766
Q ss_pred EecCCCCCC-CCcceEEEEeCCEEEEEEecCCCCC-CcccHHHHHHHHHHHHHHHHhhc-CCCCEEEEccCCCCCCCCCC
Q psy6130 153 TYGLGTKNE-HYGRNCNSNIVNTFYIRKNVPNAGA-GLKTLDKRLEWDKLFHEHLVKLD-AEKPVILIGDLNVSHKPIDL 229 (295)
Q Consensus 153 ~~~~~~~~~-~~~r~i~~~~~~~~l~~vy~p~~~~-~~~~~~~r~~~~~~l~~~l~~l~-~~~pvIl~GDFN~~~~~~D~ 229 (295)
...+....+ .++|++.+++..+.|+++|+|+++. ..+++.+|..|+..|.+++..+. .+.|+|+|||||+.+..+|.
T Consensus 77 ~~~~~~~~~~~~~r~i~~~~~~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~ 156 (254)
T TIGR00195 77 RRGFGVEEEDAEGRIIMAEFDSFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLEKLVDKDKPVLICGDMNIAPTEIDL 156 (254)
T ss_pred EECCCCcccccCCCEEEEEECCEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChhhc
Confidence 654443333 6899999999999999999999543 34567889999999999998863 46899999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 230 ANPTTNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 230 ~~~~~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
.++..+.+.++|+++|++.|..+++.||+|+||.++|... .||||++++ +++..+.|+| |||+
T Consensus 157 ~~~~~~~~~~~~~~~e~~~~~~l~~~~l~D~~r~~~~~~~-~~T~~~~~~-~~~~~~~g~RID~i~ 220 (254)
T TIGR00195 157 HSPDENRNHTGFLPEEREWLDRLLEAGLVDTFRKFNPDEG-AYSWWDYRT-KARDRNRGWRIDYFL 220 (254)
T ss_pred cChhhcCCCcCcChHHHHHHHHHHHcCCEeeecccCCCCC-CCcccCCcC-CccccCCceEEEEEE
Confidence 8888888889999999999999998899999999999855 799999999 8888899999 9975
No 5
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=9.4e-37 Score=268.01 Aligned_cols=220 Identities=44% Similarity=0.761 Sum_probs=175.8
Q ss_pred eEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEeccCceE
Q psy6130 73 FKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 73 lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~~~~~ 152 (295)
|||+||||+|++...++.++++|..++|||||||||+.....+...+.. ..||..++......+++|+||+||.++..+
T Consensus 1 lri~t~Nv~g~~~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~G~ailsr~~~~~~ 79 (255)
T TIGR00633 1 MKIISWNVNGLRARLHKLFLDWLKEEQPDVLCLQETKVADEQFPAELFE-ELGYHVFFHGAKSKGYSGVAILSKVEPLDV 79 (255)
T ss_pred CEEEEEecccHHHHhhccHHHHHHhcCCCEEEEEeccCchhhCCHhHhc-cCCceEEEeecccCCcceEEEEEcCCcceE
Confidence 6999999999988765433899999999999999998765444433333 678866655423346689999999987766
Q ss_pred EecCCCCCC-CCcceEEEEeCCEEEEEEecCCCCC-CcccHHHHHHHHHHHHHHHHh-hcCCCCEEEEccCCCCCCCCCC
Q psy6130 153 TYGLGTKNE-HYGRNCNSNIVNTFYIRKNVPNAGA-GLKTLDKRLEWDKLFHEHLVK-LDAEKPVILIGDLNVSHKPIDL 229 (295)
Q Consensus 153 ~~~~~~~~~-~~~r~i~~~~~~~~l~~vy~p~~~~-~~~~~~~r~~~~~~l~~~l~~-l~~~~pvIl~GDFN~~~~~~D~ 229 (295)
...+..... .++|++.+.+..+.|+++|+|+... ..+++++|..++..+...+.. +..+.|+|+|||||+.+..+|.
T Consensus 80 ~~~~~~~~~~~~~r~l~~~~~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~Il~GDFN~~~~~~d~ 159 (255)
T TIGR00633 80 RYGFGGEEHDEEGRVITAEFDGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYEKELDAGKPVIICGDMNVAHTEIDL 159 (255)
T ss_pred EECCCCCcccCCCcEEEEEECCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChHHc
Confidence 654444333 6788888888999999999998763 345667788788887776644 3457899999999999998898
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 230 ANPTTNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 230 ~~~~~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
.++..+.+.+++++.++..|..+++.||+|+||..+|..++.||||+++. +.+..+.|+| |||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~~~~T~~~~~~-~~~~~~~~~rID~i~ 224 (255)
T TIGR00633 160 GNPKENKGNAGFTPEEREWFDELLEAGLVDTFRHFNPDTEGAYTWWDYRS-GARDRNRGWRIDYFL 224 (255)
T ss_pred cChhhcCCCCCcCHHHHHHHHHHHHcCCEecchhhCCCCCCcCcCcCCcc-CccccCCceEEEEEE
Confidence 88777778889999999999999999999999999998755799999988 8888899999 9975
No 6
>KOG1294|consensus
Probab=99.93 E-value=1.3e-25 Score=200.73 Aligned_cols=228 Identities=41% Similarity=0.650 Sum_probs=193.6
Q ss_pred CCCCCCCceEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCC-eEEEec-CCCCCcceEE
Q psy6130 65 NKLGEEPNFKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEY-KTYWLS-SPKAGYAGVG 142 (295)
Q Consensus 65 ~~~~~~~~lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy-~~~~~~-~~~~g~~Gva 142 (295)
.+.+..-.+.|+.|||.+++...+.....++....+|++|+||+++.....+..... ..+| +.++.. ....+|.|++
T Consensus 56 ~~~g~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~l~d~~~~~~t~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~~~ 134 (335)
T KOG1294|consen 56 LKQGNRKVLNICPWDIAGLEACEKFSGDPEISSELRDLQCLLETKCTIDSGPCSHPT-EKGYTHSLLSCASKKDGYSGEI 134 (335)
T ss_pred HHhCCeeEeecCchhhhhhhhhhccccchhccccchhhhhhhhccceeccCcceecc-cCCcccceeecccccCCcccee
Confidence 345666778999999999998887667788889999999999999875544443333 6788 777776 5566888999
Q ss_pred EEEeccCceEEecCC--CCCC-CCcceEEEEeCCEEEEEEecCCCCCCcccHHHH--HHHHHHHHHHHHhhcC----CCC
Q psy6130 143 LYTKVKPNKVTYGLG--TKNE-HYGRNCNSNIVNTFYIRKNVPNAGAGLKTLDKR--LEWDKLFHEHLVKLDA----EKP 213 (295)
Q Consensus 143 ilsk~~~~~~~~~~~--~~~~-~~~r~i~~~~~~~~l~~vy~p~~~~~~~~~~~r--~~~~~~l~~~l~~l~~----~~p 213 (295)
.+++..+..+.+.+. .+.| ..+++|.+++..+.+++.|+|+.......+.++ ..|...+...+..+.. ..+
T Consensus 135 ~~~~~~p~~v~~~~~~~~s~h~~~g~~i~~e~e~~~l~~~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 214 (335)
T KOG1294|consen 135 DYSKFKPLKVHYGFGAMGSDHRPVGRVIIAEFEIFILINTYVPNIGGGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAP 214 (335)
T ss_pred eeeecccceeeecccccCCccCccceEEEEeecceeeccccCcccccccchhhhhhhhhhHHHHHHHhhhccccccccCc
Confidence 999999888888877 6667 889999999999999999999999888888888 5777778777777643 348
Q ss_pred EEEEccCCCCCCCCC----CCCCCCCC-CCCCCCHHHHHHH-HHHHhCC-ceeeecccCCCCCCcccccCCCCCCCccCC
Q psy6130 214 VILIGDLNVSHKPID----LANPTTNT-RSAGFTIEERDSF-SSLLDKG-FTDSFRHLYPKRTGAYTYWSYMSKTARSRN 286 (295)
Q Consensus 214 vIl~GDFN~~~~~~D----~~~~~~~~-~~~~~~~~e~~~~-~~ll~~g-l~D~~r~~~p~~~~~yT~~s~~~~~~~~~~ 286 (295)
++.|||.|+.|.++| ..++..+. +.++|++++|.+| ..+++.| ++|+||.++++....||+|.++. +.+.++
T Consensus 215 ~v~~gd~nvs~~~i~~~~~~~~~~~~~~~~~~~t~e~R~~~~~~~~~~~~~iDt~r~~~~~~~~~~t~Wk~~~-~~r~~~ 293 (335)
T KOG1294|consen 215 VVICGDLNVSHEEIDPSKPLVSPAGNTLSNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMP-NGRQRG 293 (335)
T ss_pred ceeccccccchhhccccccccccccCCcCCCCCCHHHhhhHHHhhccCCcceeehhhhcCCccccccchhhcc-ccccCC
Confidence 999999999999999 56777776 8899999999999 6888887 99999999999987799999999 999999
Q ss_pred Cccc-cccC
Q psy6130 287 TGCT-NYFG 294 (295)
Q Consensus 287 ~~~R-Dy~~ 294 (295)
.||| |||+
T Consensus 294 ~~~r~dy~~ 302 (335)
T KOG1294|consen 294 HGERCDYIL 302 (335)
T ss_pred CCCceeEEE
Confidence 9999 9985
No 7
>PRK05421 hypothetical protein; Provisional
Probab=99.82 E-value=5.3e-19 Score=156.22 Aligned_cols=147 Identities=17% Similarity=0.153 Sum_probs=91.5
Q ss_pred CCCceEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEe-c-CCCCCcceEEEEEe
Q psy6130 69 EEPNFKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWL-S-SPKAGYAGVGLYTK 146 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~-~-~~~~g~~Gvailsk 146 (295)
.+++|+|+||||+++........++.+ ..+|||||||||+.... +. .+.. ..+|+..+. . ....+++|+|||||
T Consensus 40 ~~~~lri~t~NI~~~~~~~~~~~l~~l-~~~~DiI~LQEv~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~GvaiLSR 115 (263)
T PRK05421 40 TEERLRLLVWNIYKQQRAGWLSVLKNL-GKDADLVLLQEAQTTPE-LV-QFAT-ANYLAADQAPAFVLPQHPSGVMTLSK 115 (263)
T ss_pred cCCceeEEEEEccccccccHHHHHHHh-ccCCCEEEEEecccCcc-hH-HHhh-cccchHHhccccccCCCccceeEeee
Confidence 457899999999988765333455666 88999999999975442 11 2222 333422121 1 23456789999999
Q ss_pred ccCceEEecCCCCCC-CCcce-EEEE--e---CCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhcCCCCEEEEcc
Q psy6130 147 VKPNKVTYGLGTKNE-HYGRN-CNSN--I---VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLDAEKPVILIGD 219 (295)
Q Consensus 147 ~~~~~~~~~~~~~~~-~~~r~-i~~~--~---~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~~~~pvIl~GD 219 (295)
+|+..+......... ..+|. +.+. + ..+.|+++|+.+..... ..|..++..+.+++... ..|+|||||
T Consensus 116 ~pi~~~~~~~~~~~~~~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~~---~~r~~q~~~l~~~~~~~--~~p~Il~GD 190 (263)
T PRK05421 116 AHPVYCCPLREREPWLRLPKSALITEYPLPNGRTLLVVNIHAINFSLGV---DVYSKQLEPIGDQIAHH--SGPVILAGD 190 (263)
T ss_pred cccceeeccCCCCccccCcceeEEEEEEeCCCCEEEEEEECccccCcCh---HHHHHHHHHHHHHHHhC--CCCEEEEcc
Confidence 987664332111111 22332 3333 2 24999999997643221 34666667777766553 579999999
Q ss_pred CCCCC
Q psy6130 220 LNVSH 224 (295)
Q Consensus 220 FN~~~ 224 (295)
||+..
T Consensus 191 FN~~~ 195 (263)
T PRK05421 191 FNTWS 195 (263)
T ss_pred cccCc
Confidence 99754
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.73 E-value=1.4e-16 Score=141.97 Aligned_cols=151 Identities=17% Similarity=0.137 Sum_probs=88.4
Q ss_pred eEEEEEecCCcch-------hhhh--hHHHHHhhcCCcEEEEcccCCCCC--CCChhhhhcCCCC--eEEEecC------
Q psy6130 73 FKIASWNVAGLRA-------CVKK--EGLDYIKKEDADIFCLQETKCHET--QLPPEVKMKFPEY--KTYWLSS------ 133 (295)
Q Consensus 73 lkI~TwNv~g~~~-------~~~~--~~~~~i~~~~pDIi~LQE~~~~~~--~~~~~~~~~~~gy--~~~~~~~------ 133 (295)
||||||||+.+.. +..| .+...+...+||||||||+..... .+...+. ..| ...+...
T Consensus 1 lkVmtyNv~~l~~~~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~~~l~~~L~---~~yp~~~~~~g~~~~g~~ 77 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSASKRLLDNLR---EEYPYQTDVIGRSKKGWD 77 (283)
T ss_pred CeEEEEEeeeecccccCCccHhHHHHHHHHhhcccCCCEEEEecccchHHHHHHHHHHH---hhCCceEeecccccccch
Confidence 6899999974321 1111 245556777999999999964321 1222221 223 1111100
Q ss_pred --------CCCCcceEEEEEeccCceEEe-cCCC--CCC--CCcceEEEEe----CCEEEEEEecCCCCCC---cccHHH
Q psy6130 134 --------PKAGYAGVGLYTKVKPNKVTY-GLGT--KNE--HYGRNCNSNI----VNTFYIRKNVPNAGAG---LKTLDK 193 (295)
Q Consensus 134 --------~~~g~~Gvailsk~~~~~~~~-~~~~--~~~--~~~r~i~~~~----~~~~l~~vy~p~~~~~---~~~~~~ 193 (295)
.....+|++||||+|+..... .++. ... ....++.+++ ..+.|+++|+.+.... ......
T Consensus 78 ~~~g~~~~~~~~~~G~~iLSr~Pi~~~~~~~f~~~~~~d~~~~kg~l~a~i~~~g~~~~v~~THL~~~~~~~~~~~~~~~ 157 (283)
T TIGR03395 78 KTLGNYSSSALEDGGVAIVSKWPIEEKIQYIFNKGCGADNLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASI 157 (283)
T ss_pred hccccccccCccCCEEEEEECCCccccEEEEccCCCCCccccCCceEEEEEecCCeEEEEEEeCCCCCcccccccccHHH
Confidence 112346999999998765432 1211 111 1223444443 3699999999764321 111357
Q ss_pred HHHHHHHHHHHHHhh--cCCCCEEEEccCCCCCCC
Q psy6130 194 RLEWDKLFHEHLVKL--DAEKPVILIGDLNVSHKP 226 (295)
Q Consensus 194 r~~~~~~l~~~l~~l--~~~~pvIl~GDFN~~~~~ 226 (295)
|..++.+|.+++... ..+.|+|||||||+.+.+
T Consensus 158 R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s 192 (283)
T TIGR03395 158 RANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGS 192 (283)
T ss_pred HHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCC
Confidence 888888998888653 346789999999998754
No 9
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.66 E-value=5.1e-17 Score=139.74 Aligned_cols=145 Identities=21% Similarity=0.313 Sum_probs=77.0
Q ss_pred EEEecCCcchh-----hhhhHHHHHhhcCCcEEEEcccCCCC--CCCChhhhhcCCCCe-EEEecCCCC---CcceEEEE
Q psy6130 76 ASWNVAGLRAC-----VKKEGLDYIKKEDADIFCLQETKCHE--TQLPPEVKMKFPEYK-TYWLSSPKA---GYAGVGLY 144 (295)
Q Consensus 76 ~TwNv~g~~~~-----~~~~~~~~i~~~~pDIi~LQE~~~~~--~~~~~~~~~~~~gy~-~~~~~~~~~---g~~Gvail 144 (295)
|||||++.... ..+.+.++|...+||||||||+.... ..+...+.. ..++. ..+...... +..|++|+
T Consensus 1 ~T~Nv~~~~~~~~~~~~~~~i~~~i~~~~~Dii~LQEv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~ 79 (249)
T PF03372_consen 1 MTWNVRGWNYRSDNDRKRREIAQWIAELDPDIIALQEVRNDDLSELLEEQLRG-YLGYYGSFWPGNSPPSDAGGYGVAIL 79 (249)
T ss_dssp EEEEESTHHHHHHHHHHHHHHHHHHHHHT-SEEEEEEEESHHHHHHHHHHHHT-CTTHEEEEEETSSSTTCSSSEEEEEE
T ss_pred CeEEeCcCcccccchhHHHHHHHHHHhcCCCEEEEecchhhhhhhhhhhhccc-ccccccceeccccccccccCceEEEE
Confidence 79999994221 11248899999999999999997431 111222222 22322 222221111 34699999
Q ss_pred EeccCceEEecCC---CCCCCCcc-eEEEE---------eCCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhc--
Q psy6130 145 TKVKPNKVTYGLG---TKNEHYGR-NCNSN---------IVNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLD-- 209 (295)
Q Consensus 145 sk~~~~~~~~~~~---~~~~~~~r-~i~~~---------~~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~-- 209 (295)
+|.++........ ........ ..... ...|.|+++|+++.. ..+..+..++...+..+.
T Consensus 80 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~H~~~~~------~~~~~~~~~~~~~~~~~~~~ 153 (249)
T PF03372_consen 80 SRSPIFSSVSYVFSLFSKPGIRIFRRSSKSKGIVPVSINGKPITVVNVHLPSSN------DERQEQWRELLARIQKIYAD 153 (249)
T ss_dssp ESSCCCEEEEEEEEEESSSTTCEEEEEEEEEEEEEEEEETEEEEEEEEETTSHH------HHHHHHHHHHHHHHHHHHHT
T ss_pred EccccccccccccccccccccccccccccccccccccccceEEEeeeccccccc------hhhhhhhhhhhhhhhhcccc
Confidence 9998765432211 10001100 11110 236889999988722 223332335555555442
Q ss_pred -CCCCEEEEccCCCCCCCC
Q psy6130 210 -AEKPVILIGDLNVSHKPI 227 (295)
Q Consensus 210 -~~~pvIl~GDFN~~~~~~ 227 (295)
...|+|||||||+.+.+.
T Consensus 154 ~~~~~~iv~GDfN~~~~~~ 172 (249)
T PF03372_consen 154 NPNEPVIVMGDFNSRPDSR 172 (249)
T ss_dssp SSCCEEEEEEE-SS-BSSG
T ss_pred cccceEEEEeecccCCccc
Confidence 223699999999988653
No 10
>KOG2756|consensus
Probab=99.65 E-value=1e-15 Score=130.04 Aligned_cols=191 Identities=18% Similarity=0.227 Sum_probs=118.3
Q ss_pred CCCceEEEEEecCCcchh----hhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCC-eEEEecCCCCCcceEEE
Q psy6130 69 EEPNFKIASWNVAGLRAC----VKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEY-KTYWLSSPKAGYAGVGL 143 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~----~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy-~~~~~~~~~~g~~Gvai 143 (295)
....+.++|||+.|+... .-+.+..+|+-+.|||||||||.....+..+. ...| ..+.. ...+++|.++
T Consensus 96 ~g~~~S~~~WnidgLdln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y~~~~K----~~s~y~i~~~--~~~~~~~~~~ 169 (349)
T KOG2756|consen 96 QGSMFSLITWNIDGLDLNNLSERMRAVCHYLALYSPDVIFLQEVIPPYYSYLKK----RSSNYEIITG--HEEGYFTAIM 169 (349)
T ss_pred cccEEEEEEeeccccccchHHHHHHHHHHHHHhcCCCEEEEeecCchhhHHHHH----hhhheeEEEe--ccceeeeeee
Confidence 446689999999988643 12467889999999999999997655333322 3344 44444 3445567666
Q ss_pred EEeccCceEEe--cCCCCCCCCcce---EEEEeC--CEEEEEEecCCCCCCcccHHHHHHH----HHHHHHHHHhhcCCC
Q psy6130 144 YTKVKPNKVTY--GLGTKNEHYGRN---CNSNIV--NTFYIRKNVPNAGAGLKTLDKRLEW----DKLFHEHLVKLDAEK 212 (295)
Q Consensus 144 lsk~~~~~~~~--~~~~~~~~~~r~---i~~~~~--~~~l~~vy~p~~~~~~~~~~~r~~~----~~~l~~~l~~l~~~~ 212 (295)
+.+.. +.+.. .+.......+|. +.++++ .+.+.+.|+.+..... ++|.++ ++++.+.|+.+ ++.
T Consensus 170 l~~s~-~~Vks~~~i~F~NS~M~R~L~I~Ev~v~G~Kl~l~tsHLEStr~h~---P~r~~qF~~~~~k~~EaIe~l-PnA 244 (349)
T KOG2756|consen 170 LKKSR-VKVKSQEIIPFPNSKMMRNLLIVEVNVSGNKLCLMTSHLESTRGHA---PERMNQFKMVLKKMQEAIESL-PNA 244 (349)
T ss_pred eehhh-cCccccceeccCcchhhheeEEEEEeecCceEEEEeccccCCCCCC---hHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 64332 22221 122222234443 334443 6889999998866554 334433 33444445544 789
Q ss_pred CEEEEccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhCCceeeecccC-CCCCCcccccCCCCCCCccCCC--cc
Q psy6130 213 PVILIGDLNVSHKPIDLANPTTNTRSAGFTIEERDSFSSLLDKGFTDSFRHLY-PKRTGAYTYWSYMSKTARSRNT--GC 289 (295)
Q Consensus 213 pvIl~GDFN~~~~~~D~~~~~~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~-p~~~~~yT~~s~~~~~~~~~~~--~~ 289 (295)
.||++||+|....+.-.. =+-.+++|+|..+. |+.. .|||.+.+. ...+.+. ..
T Consensus 245 ~ViFGGD~NlrD~ev~r~---------------------~lPD~~vDvWE~lg~p~~~-~FTwDT~~N-~nl~G~~a~k~ 301 (349)
T KOG2756|consen 245 TVIFGGDTNLRDREVTRC---------------------GLPDNIVDVWEFLGKPKHC-QFTWDTQMN-SNLGGTAACKL 301 (349)
T ss_pred eEEEcCcccchhhhcccC---------------------CCCchHHHHHHHhCCCCcC-ceeeecccC-cccchhHHHHH
Confidence 999999999865332100 02237899999998 6655 699988777 6666654 44
Q ss_pred c-ccc
Q psy6130 290 T-NYF 293 (295)
Q Consensus 290 R-Dy~ 293 (295)
| |.+
T Consensus 302 RfDRi 306 (349)
T KOG2756|consen 302 RFDRI 306 (349)
T ss_pred HHHHH
Confidence 7 764
No 11
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.62 E-value=4.6e-15 Score=128.00 Aligned_cols=150 Identities=19% Similarity=0.203 Sum_probs=90.8
Q ss_pred ceEEEEEecCCcchh-hh----hhHHHHHhhcCCcEEEEcccCCCCC-------CCChhhhhcCCCCeEEEec--C---C
Q psy6130 72 NFKIASWNVAGLRAC-VK----KEGLDYIKKEDADIFCLQETKCHET-------QLPPEVKMKFPEYKTYWLS--S---P 134 (295)
Q Consensus 72 ~lkI~TwNv~g~~~~-~~----~~~~~~i~~~~pDIi~LQE~~~~~~-------~~~~~~~~~~~gy~~~~~~--~---~ 134 (295)
.++|+||||+.+... .. ..+.+.|++..+|||||||+..... ++...+.. ..+.+.++.. . .
T Consensus 9 ~~~v~TyNih~~~~~~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~ 87 (259)
T COG3568 9 RFKVLTYNIHKGFGAFDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGR-LGLAPYWWSGAAFGAVY 87 (259)
T ss_pred eeEEEEEEEEEccCccCceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHH-hcCCccccchhhhhhhc
Confidence 389999999644332 11 2477889999999999999974221 11111221 2222222221 1 3
Q ss_pred CCCcceEEEEEeccCceEEec-CCCCCCCCcc-eEEEEe-----CCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHh
Q psy6130 135 KAGYAGVGLYTKVKPNKVTYG-LGTKNEHYGR-NCNSNI-----VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVK 207 (295)
Q Consensus 135 ~~g~~Gvailsk~~~~~~~~~-~~~~~~~~~r-~i~~~~-----~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~ 207 (295)
..+.+|++|||+.++..+... ++.....+.| .+.+++ ..+.|+|+|+.-.. ..|+++++.|...+ .
T Consensus 88 ~~~~~GnaiLS~~pi~~v~~~~lp~~~~~~~Rgal~a~~~~~~g~~l~V~~~HL~l~~------~~R~~Q~~~L~~~~-~ 160 (259)
T COG3568 88 GEGQHGNAILSRLPIRDVENLALPDPTGLEPRGALLAEIELPGGKPLRVINAHLGLSE------ESRLRQAAALLALA-G 160 (259)
T ss_pred ccceeeeEEEecCcccchhhccCCCCCCCCCceeEEEEEEcCCCCEEEEEEEeccccH------HHHHHHHHHHHhhc-c
Confidence 456789999998887665432 3322113444 333332 37999999996321 35666666665521 3
Q ss_pred hcCCCCEEEEccCCCCCCCCCC
Q psy6130 208 LDAEKPVILIGDLNVSHKPIDL 229 (295)
Q Consensus 208 l~~~~pvIl~GDFN~~~~~~D~ 229 (295)
+....|+|+|||||+.+.+-++
T Consensus 161 l~~~~p~vl~GDFN~~p~s~~y 182 (259)
T COG3568 161 LPALNPTVLMGDFNNEPGSAEY 182 (259)
T ss_pred CcccCceEEEccCCCCCCCccc
Confidence 3445599999999999877554
No 12
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.59 E-value=3.6e-14 Score=136.52 Aligned_cols=154 Identities=17% Similarity=0.201 Sum_probs=92.5
Q ss_pred CCCCceEEEEEecCCc---------------chhhh--hhHHHHHhhcCCcEEEEcccCCCCC-CC-ChhhhhcCCCCeE
Q psy6130 68 GEEPNFKIASWNVAGL---------------RACVK--KEGLDYIKKEDADIFCLQETKCHET-QL-PPEVKMKFPEYKT 128 (295)
Q Consensus 68 ~~~~~lkI~TwNv~g~---------------~~~~~--~~~~~~i~~~~pDIi~LQE~~~~~~-~~-~~~~~~~~~gy~~ 128 (295)
.....|+||||||..- ..|.. ..|++.|..++||||||||+..... ++ ...+. ..||..
T Consensus 250 ~~~~~frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~~d~~~p~L~--~~GY~G 327 (606)
T PLN03144 250 SSAGTFTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDHFEEFFAPELD--KHGYQA 327 (606)
T ss_pred CCCCCEEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHHHHHHHHhhhh--hcCceE
Confidence 4567899999999632 11222 2488999999999999999954321 12 22232 457865
Q ss_pred EEec-CCC------CCcceEEEEEeccCceEEec--C--C-----CCCC---------CCcc--------eEEEEe----
Q psy6130 129 YWLS-SPK------AGYAGVGLYTKVKPNKVTYG--L--G-----TKNE---------HYGR--------NCNSNI---- 171 (295)
Q Consensus 129 ~~~~-~~~------~g~~Gvailsk~~~~~~~~~--~--~-----~~~~---------~~~r--------~i~~~~---- 171 (295)
++.. .+. ....|+|||+|...|.+... + . ..+. ...| ++.++.
T Consensus 328 v~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~~ 407 (606)
T PLN03144 328 LYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFGN 407 (606)
T ss_pred EEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEEEEEEEeccc
Confidence 5543 111 12469999999987775432 1 0 0000 1112 111221
Q ss_pred ---------CCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhc--CCCCEEEEccCCCCCCC
Q psy6130 172 ---------VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLD--AEKPVILIGDLNVSHKP 226 (295)
Q Consensus 172 ---------~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~--~~~pvIl~GDFN~~~~~ 226 (295)
..|.|+|+|+-..... -..|+.+...|.+.++.+. .+.|+|||||||+.+.+
T Consensus 408 ~~~~~~~~~~~l~VaNTHL~~~p~~---~dvRl~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S 470 (606)
T PLN03144 408 QGADNGGKRQLLCVANTHIHANQEL---KDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGS 470 (606)
T ss_pred ccccCCCCccEEEEEEeeeccCCcc---chhHHHHHHHHHHHHHHHhhcCCCceEEeccCCCCCCC
Confidence 1388999999443221 1345555566666666552 46899999999999865
No 13
>PTZ00297 pantothenate kinase; Provisional
Probab=99.58 E-value=7.4e-14 Score=146.54 Aligned_cols=151 Identities=12% Similarity=0.116 Sum_probs=88.8
Q ss_pred CCCCceEEEEEecCCcc----hhhhhhHHHHHhh-cCCcEEEEcccCCCCC-------CCC-----hhhhhcCCCCeEEE
Q psy6130 68 GEEPNFKIASWNVAGLR----ACVKKEGLDYIKK-EDADIFCLQETKCHET-------QLP-----PEVKMKFPEYKTYW 130 (295)
Q Consensus 68 ~~~~~lkI~TwNv~g~~----~~~~~~~~~~i~~-~~pDIi~LQE~~~~~~-------~~~-----~~~~~~~~gy~~~~ 130 (295)
.....|+|+||||+.+. ....+++..+|+. .+||||||||+.-... +++ .+... ..||..+.
T Consensus 6 ~~~~~l~VlTyNv~~~~~~~~~~~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ 84 (1452)
T PTZ00297 6 AGCAQARVLSYNFNILPRGCGGFQHERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVDELK-ARGFHHYV 84 (1452)
T ss_pred CCCCceEEEEEEccccCCCcccccHHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHHHHH-hcCCceeE
Confidence 34557999999997442 2223457788888 5889999999964320 111 11112 34773332
Q ss_pred -ec-C-CCC-------CcceEEEEEeccCceEEec-CCCC---CCCCcc-eEEE--Ee-------CCEEEEEEecCCCCC
Q psy6130 131 -LS-S-PKA-------GYAGVGLYTKVKPNKVTYG-LGTK---NEHYGR-NCNS--NI-------VNTFYIRKNVPNAGA 186 (295)
Q Consensus 131 -~~-~-~~~-------g~~Gvailsk~~~~~~~~~-~~~~---~~~~~r-~i~~--~~-------~~~~l~~vy~p~~~~ 186 (295)
.. + ... ..+|+||+||+|+...... ++.. ++...| ++.+ ++ ..+.++++|+-....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~G~AILSR~PI~~~~~~~l~~~~~~~~~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~ 164 (1452)
T PTZ00297 85 ISKQPSYLTMLRYNVCSDNGLIIASRFPIWQRGSYTFRNHERGEQSVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDS 164 (1452)
T ss_pred eecCccccccccCccccCCEEEEEECCChhhceeeecCcccccccccccceEEEEEEccccCCCCceEEEEEeCCCCCCC
Confidence 22 1 011 4479999999998764432 2211 111222 2333 32 259999999976543
Q ss_pred CcccHHHHHHHHHHHHHHHHh-h---------cCCCCEEEEccCCCC
Q psy6130 187 GLKTLDKRLEWDKLFHEHLVK-L---------DAEKPVILIGDLNVS 223 (295)
Q Consensus 187 ~~~~~~~r~~~~~~l~~~l~~-l---------~~~~pvIl~GDFN~~ 223 (295)
.. .|..+..++.++++. + ....|+|||||||+.
T Consensus 165 ~~----~R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~ 207 (1452)
T PTZ00297 165 LP----STSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNIN 207 (1452)
T ss_pred cc----hHHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCc
Confidence 32 345555666666654 2 245799999999975
No 14
>KOG2338|consensus
Probab=99.57 E-value=1.8e-14 Score=132.55 Aligned_cols=151 Identities=17% Similarity=0.185 Sum_probs=94.0
Q ss_pred CceEEEEEecCCcc-----------------hh--hhhhHHHHHhhcCCcEEEEcccCCCCCC-CChhhhhcCCCCeEEE
Q psy6130 71 PNFKIASWNVAGLR-----------------AC--VKKEGLDYIKKEDADIFCLQETKCHETQ-LPPEVKMKFPEYKTYW 130 (295)
Q Consensus 71 ~~lkI~TwNv~g~~-----------------~~--~~~~~~~~i~~~~pDIi~LQE~~~~~~~-~~~~~~~~~~gy~~~~ 130 (295)
..++||||||-... .| ..+.|+..|..++|||+|||||+..... +...... ..||..++
T Consensus 115 f~ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~~~~~~~~~-~lGy~~~~ 193 (495)
T KOG2338|consen 115 FDFTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHYPEFWQPLLG-KLGYTGFF 193 (495)
T ss_pred cceEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhhHHHHHHHHh-hcCceEEE
Confidence 58999999994221 11 2235889999999999999999865422 2223333 67896555
Q ss_pred ecCCCCCcceEEEEEeccCceEEecCCCCCC----------CCcceEEEEe-------CCEEEEEEecCCCCC-CcccHH
Q psy6130 131 LSSPKAGYAGVGLYTKVKPNKVTYGLGTKNE----------HYGRNCNSNI-------VNTFYIRKNVPNAGA-GLKTLD 192 (295)
Q Consensus 131 ~~~~~~g~~Gvailsk~~~~~~~~~~~~~~~----------~~~r~i~~~~-------~~~~l~~vy~p~~~~-~~~~~~ 192 (295)
........+||||+++...|.+........+ --+-++.+.+ ..+.|+|+|+-.... ..+
T Consensus 194 ~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~v--- 270 (495)
T KOG2338|consen 194 KRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPSRSDV--- 270 (495)
T ss_pred EeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecCcccch---
Confidence 4423233479999999988775532111100 1122344443 268999999865432 233
Q ss_pred HHHHHHHHHHHHHHhh----cCCCCEEEEccCCCCCCC
Q psy6130 193 KRLEWDKLFHEHLVKL----DAEKPVILIGDLNVSHKP 226 (295)
Q Consensus 193 ~r~~~~~~l~~~l~~l----~~~~pvIl~GDFN~~~~~ 226 (295)
|+++...|.+.+++. ..+.|+|+|||||+.+.+
T Consensus 271 -rL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~ 307 (495)
T KOG2338|consen 271 -RLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDS 307 (495)
T ss_pred -hhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCC
Confidence 444444444444444 236699999999998865
No 15
>KOG3873|consensus
Probab=99.56 E-value=1.9e-15 Score=133.34 Aligned_cols=177 Identities=20% Similarity=0.195 Sum_probs=111.6
Q ss_pred CCCceEEEEEecCCcchhhh------hhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCC--CCeEEEecCCCCCcce
Q psy6130 69 EEPNFKIASWNVAGLRACVK------KEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFP--EYKTYWLSSPKAGYAG 140 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~~~------~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~--gy~~~~~~~~~~g~~G 140 (295)
....|||+|.|++|+....+ +.+-+++..+..||+.|||+++.++ +........+ -|..||.+ +--| .|
T Consensus 5 ~a~~lriltlN~Wgip~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD-~~~L~~~~ss~yPysh~FHS-GimG-aG 81 (422)
T KOG3873|consen 5 LALELRILTLNIWGIPYVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQED-FEYLQSGCSSVYPYSHYFHS-GIMG-AG 81 (422)
T ss_pred hhheeeeeEeeccccccccchhHHHHHHHhHHHhhcccchhhHHHHHHHHH-HHHHHHhccccCchHHhhhc-cccc-Cc
Confidence 35579999999999863222 2466788999999999999987652 2211110022 34333332 5555 69
Q ss_pred EEEEEeccCceEEe---cCCCCC-------CCCcceEE---EEeCC--EEEEEEe--cCCCCCCcccHHHHHHHHHHHHH
Q psy6130 141 VGLYTKVKPNKVTY---GLGTKN-------EHYGRNCN---SNIVN--TFYIRKN--VPNAGAGLKTLDKRLEWDKLFHE 203 (295)
Q Consensus 141 vailsk~~~~~~~~---~~~~~~-------~~~~r~i~---~~~~~--~~l~~vy--~p~~~~~~~~~~~r~~~~~~l~~ 203 (295)
+++|||+|+.+... .+...+ +..|..+- +..+. +.+.|+| +|-+......+.+|..+...+.+
T Consensus 82 L~vfSK~PI~~t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~~l~~~g~~v~~yntHLHAeY~rq~D~YL~HR~~QAwdlaq 161 (422)
T KOG3873|consen 82 LCVFSKHPILETLFHRYSLNGYPHAIHRGDWFGGKGVGLTVLLVGGRMVNLYNTHLHAEYDRQNDEYLCHRVAQAWDLAQ 161 (422)
T ss_pred eEEeecCchhhhhhhccccCCccceeeeccccccceeEEEEEeeCCEEeeeeehhccccccccCchhhhHHHHHHHHHHH
Confidence 99999999765332 122111 12232221 22333 3334433 34444455678999988888989
Q ss_pred HHHhhc-CCCCEEEEccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCC
Q psy6130 204 HLVKLD-AEKPVILIGDLNVSHKPIDLANPTTNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKR 268 (295)
Q Consensus 204 ~l~~l~-~~~pvIl~GDFN~~~~~~D~~~~~~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~ 268 (295)
+++... ...-||++||||+.|.++- ..-++.+||+|+|+.+|++.
T Consensus 162 fi~~t~q~~~vVI~~GDLN~~P~dl~--------------------~~ll~~a~l~daw~~~h~~q 207 (422)
T KOG3873|consen 162 FIRATRQNADVVILAGDLNMQPQDLG--------------------HKLLLSAGLVDAWTSLHLDQ 207 (422)
T ss_pred HHHHHhcCCcEEEEecCCCCCccccc--------------------eeeeeccchhhhHhhhchhh
Confidence 888763 5788999999999986641 22234679999999888764
No 16
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.51 E-value=1e-12 Score=114.43 Aligned_cols=152 Identities=18% Similarity=0.268 Sum_probs=97.1
Q ss_pred CCCCceEEEEEecCCcchhh--h--hhHHHHHhhc-CCcEEEEcccCCCCCC--------------CC-hh----hh-hc
Q psy6130 68 GEEPNFKIASWNVAGLRACV--K--KEGLDYIKKE-DADIFCLQETKCHETQ--------------LP-PE----VK-MK 122 (295)
Q Consensus 68 ~~~~~lkI~TwNv~g~~~~~--~--~~~~~~i~~~-~pDIi~LQE~~~~~~~--------------~~-~~----~~-~~ 122 (295)
+.-..++++|||++|..... | -.+..+|... ++|||+|||+-.-... ++ .+ +. ..
T Consensus 20 ~~~~~~~~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v~ey~w~l~~~s 99 (271)
T PRK15251 20 ANLEDYKVATWNLQGSSASTESKWNVNVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPIDEYTWNLGTRS 99 (271)
T ss_pred cccccceEEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCcccEEEEccCcc
Confidence 35567899999999884321 1 1366777654 6999999998422111 01 11 00 01
Q ss_pred CCCC-eEEEec-CCCCCcceEEEEEeccCceEEecCCCCCCCCcceEEEEeCCEEEEEEecCCCCCCcccHHHHHHHHHH
Q psy6130 123 FPEY-KTYWLS-SPKAGYAGVGLYTKVKPNKVTYGLGTKNEHYGRNCNSNIVNTFYIRKNVPNAGAGLKTLDKRLEWDKL 200 (295)
Q Consensus 123 ~~gy-~~~~~~-~~~~g~~Gvailsk~~~~~~~~~~~~~~~~~~r~i~~~~~~~~l~~vy~p~~~~~~~~~~~r~~~~~~ 200 (295)
.+++ +.|+.. ....|..|+||+||.++..+.. ++.+......++.++++.+.++++|+.+.+.. .+..+...
T Consensus 100 rpgm~YiY~~aiD~~ggr~glAIlSr~~a~~~~~-l~~p~~~~Rpilgi~i~~~~ffstH~~a~~~~-----da~aiV~~ 173 (271)
T PRK15251 100 RPNQVYIYYSRVDVGANRVNLAIVSRRRADEVIV-LRPPTVASRPIIGIRIGNDVFFSIHALANGGT-----DAGAIVRA 173 (271)
T ss_pred CCCceEEEEecccCCCCceeEEEEecccccceEE-ecCCCCcccceEEEEecCeEEEEeeecCCCCc-----cHHHHHHH
Confidence 3456 444443 3345667999999998654332 22221145567778888899999999987432 25556666
Q ss_pred HHHHHH-hhcCCCCEEEEccCCCCCCC
Q psy6130 201 FHEHLV-KLDAEKPVILIGDLNVSHKP 226 (295)
Q Consensus 201 l~~~l~-~l~~~~pvIl~GDFN~~~~~ 226 (295)
+.++.. .. +..|||||||||..|++
T Consensus 174 I~~~f~~~~-~~~pw~I~GDFNr~P~s 199 (271)
T PRK15251 174 VHNFFRPNM-RHINWMIAGDFNRSPDR 199 (271)
T ss_pred HHHHHhhcc-CCCCEEEeccCCCCCcc
Confidence 666665 32 35799999999988876
No 17
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.20 E-value=5e-10 Score=98.98 Aligned_cols=144 Identities=11% Similarity=0.060 Sum_probs=79.2
Q ss_pred CceEEEEEecCCcchhh------hhhHHHHHhhcCCcEEEEcccCCCCCC-CCh---hhhhc-CCCCeEEEec-CCCC-C
Q psy6130 71 PNFKIASWNVAGLRACV------KKEGLDYIKKEDADIFCLQETKCHETQ-LPP---EVKMK-FPEYKTYWLS-SPKA-G 137 (295)
Q Consensus 71 ~~lkI~TwNv~g~~~~~------~~~~~~~i~~~~pDIi~LQE~~~~~~~-~~~---~~~~~-~~gy~~~~~~-~~~~-g 137 (295)
..|+|+||||+...... ...++++|+ ++|||+|||+...+.. +.. .+... ..+|..+.+. .+.. +
T Consensus 16 ~~l~I~SfNIr~fgd~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r~gr~~~ 93 (276)
T smart00476 16 ASLRICAFNIQSFGDSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPLGRNSY 93 (276)
T ss_pred CcEEEEEEECcccCCccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCCCCCCCC
Confidence 46999999998543211 112455555 8899999999754321 211 11110 1367655543 1111 1
Q ss_pred cceEEEEEeccCceEEec--CCCC----C--C-CCcceEEEEe-----CCEEEEEEecCCCCCCcccHHHHHHHHHHHHH
Q psy6130 138 YAGVGLYTKVKPNKVTYG--LGTK----N--E-HYGRNCNSNI-----VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHE 203 (295)
Q Consensus 138 ~~Gvailsk~~~~~~~~~--~~~~----~--~-~~~r~i~~~~-----~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~ 203 (295)
..-.++++|...+++... +.+. . + .+.-++.... ..|.++++|..+.. +....++|.+
T Consensus 94 ~E~~a~~Yr~drv~v~~~~~f~d~~~~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H~~p~~--------~~~e~~aL~~ 165 (276)
T smart00476 94 KEQYLFLYRSDLVSVLDSYLYDDGCECGNDVFSREPFVVKFSSPSTAVKEFVIVPLHTTPEA--------AVAEIDALYD 165 (276)
T ss_pred CEEEEEEEecceEEEcccceecCCCCCccccccccceEEEEEeCCCCCccEEEEEecCChHH--------HHHHHHHHHH
Confidence 235788988876654322 2211 1 1 2333333322 26999999987632 1122233333
Q ss_pred ----HHHhhcCCCCEEEEccCCCCCC
Q psy6130 204 ----HLVKLDAEKPVILIGDLNVSHK 225 (295)
Q Consensus 204 ----~l~~l~~~~pvIl~GDFN~~~~ 225 (295)
..+.. ...++||+||||+..+
T Consensus 166 v~~~~~~~~-~~~~villGDFNa~~~ 190 (276)
T smart00476 166 VYLDVRQKW-GTEDVIFMGDFNAGCS 190 (276)
T ss_pred HHHHHHHhh-ccCCEEEEccCCCCCC
Confidence 22322 4789999999999764
No 18
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.03 E-value=9e-10 Score=97.06 Aligned_cols=149 Identities=17% Similarity=0.055 Sum_probs=88.3
Q ss_pred CCCceEEEEEecCCcchhhhhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecCCCCCcceEEEEEecc
Q psy6130 69 EEPNFKIASWNVAGLRACVKKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSSPKAGYAGVGLYTKVK 148 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~~~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~~~~g~~Gvailsk~~ 148 (295)
....+++++.|++.-+.... .++..+...++|++.+||+..-.......+ ...|..+.......+..+++++|+.+
T Consensus 85 ~~~~~~~l~~N~r~~n~~~~-k~Lsl~~~~~~D~v~~~E~~~~~~~~~~~l---~~~yP~~~~~~~~~~~~~~a~~sr~~ 160 (309)
T COG3021 85 DQRLLWNLQKNVRFDNASVA-KLLSLIQQLDADAVTTPEGVQLWTAKVGAL---AAQYPAFILCQHPTGVFTLAILSRRP 160 (309)
T ss_pred cchhhhhhhhhccccCcCHH-HHHHHHhhhCcchhhhHHHHHHhHhHHHHH---HHhCCceeecCCCCCeeeeeeccccc
Confidence 35568899999877766554 478888888899999999964332222122 34453333332333667999999986
Q ss_pred CceEEecCCCCCCCCcceEEEE----eCCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhcCCCCEEEEccCCCCC
Q psy6130 149 PNKVTYGLGTKNEHYGRNCNSN----IVNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLDAEKPVILIGDLNVSH 224 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~r~i~~~----~~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~~~~pvIl~GDFN~~~ 224 (295)
.......-.-.....++++++- ...+.++++|..+..... ..+| .++.++.+.+... ..|+|++||||+++
T Consensus 161 ~~~~~~~e~~~~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~--~~~~-~ql~~l~~~i~~~--~gpvIlaGDfNa~p 235 (309)
T COG3021 161 CCPLTEAEPWLRLPKSALATAYPLPDGTELTVVALHAVNFPVGT--DPQR-AQLLELGDQIAGH--SGPVILAGDFNAPP 235 (309)
T ss_pred cccccccCccccCCccceeEEEEcCCCCEEEEEeeccccccCCc--cHHH-HHHHHHHHHHHcC--CCCeEEeecCCCcc
Confidence 3211111000000223333332 347889999887533322 2344 4445555555543 59999999999987
Q ss_pred CC
Q psy6130 225 KP 226 (295)
Q Consensus 225 ~~ 226 (295)
.+
T Consensus 236 WS 237 (309)
T COG3021 236 WS 237 (309)
T ss_pred hh
Confidence 54
No 19
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=98.82 E-value=3.8e-09 Score=81.46 Aligned_cols=91 Identities=23% Similarity=0.320 Sum_probs=47.3
Q ss_pred EEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhcCCCCEEEEccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy6130 174 TFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLDAEKPVILIGDLNVSHKPIDLANPTTNTRSAGFTIEERDSFSSLL 253 (295)
Q Consensus 174 ~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~~~~pvIl~GDFN~~~~~~D~~~~~~~~~~~~~~~~e~~~~~~ll 253 (295)
+.|+++|.|+.. .+..+...|.+++...... ++||+||||+.+..++..... ..+.+.|..++
T Consensus 1 i~i~~vY~pp~~-------~~~~~~~~l~~~~~~~~~~-~~Ii~GDFN~~~~~w~~~~~~---------~~~~~~l~~~~ 63 (119)
T PF14529_consen 1 ITIISVYAPPSS-------EREEFFDQLRQLLKNLPPA-PIIIGGDFNAHHPNWDSSNTN---------SRRGEQLLDWL 63 (119)
T ss_dssp EEEEEEE--TTS--------CHHHHHHHHHHHHCCTTS-SEEEEEE-----GGGT-SCHH---------HHHHHHHHHHH
T ss_pred CEEEEEECCCCc-------cHHHHHHHHHHHHHhCCCC-CEEEEeECCCCchhhhhcccc---------chhHHHHHHHh
Confidence 579999999976 1334556666666655333 999999999987665432110 03345666665
Q ss_pred h-CCceeeecccCCCCCCcccccCCCCCCCccCCCccc-cccC
Q psy6130 254 D-KGFTDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYFG 294 (295)
Q Consensus 254 ~-~gl~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~~ 294 (295)
+ .+|.++ ++... .|||++..+ +.| ||++
T Consensus 64 ~~~~l~~~----~~~~~-~~T~~~~~~--------~s~iD~~~ 93 (119)
T PF14529_consen 64 DSHNLVDL----NPPGR-PPTFISNSH--------GSRIDLIL 93 (119)
T ss_dssp HHCTEEE-------TT----SEEECCC--------EE--EEEE
T ss_pred hhceeeee----ecCCC-CCcccCCCC--------CceEEEEE
Confidence 4 589988 33333 499977644 237 8864
No 20
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=98.78 E-value=8.6e-09 Score=91.80 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=50.2
Q ss_pred ceEEEEEecCCcc--------------hh--hhhhHHHHHhhcCCcEEEEcccCCCCC-CCChhhhhcCCCCeEEEec-C
Q psy6130 72 NFKIASWNVAGLR--------------AC--VKKEGLDYIKKEDADIFCLQETKCHET-QLPPEVKMKFPEYKTYWLS-S 133 (295)
Q Consensus 72 ~lkI~TwNv~g~~--------------~~--~~~~~~~~i~~~~pDIi~LQE~~~~~~-~~~~~~~~~~~gy~~~~~~-~ 133 (295)
.++||||||.... .| .++.+++.|..+++||+||||+..... ++...... ..||...+.. .
T Consensus 30 ~ftimTYN~Laq~y~~r~~y~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~~~~fw~~~l~-~~gY~~if~~k~ 108 (378)
T COG5239 30 DFTIMTYNVLAQTYATRKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQEVDAEDFEDFWKDQLG-KLGYDGIFIPKE 108 (378)
T ss_pred eeEEEehhhhhhhhccccccCCchhhhhhHHHHHHHHHHHhccCCceeeeehhhhhHHHHHHHHHhc-ccccceEEecCC
Confidence 7999999994321 11 122477889999999999999986553 35555555 7789544443 2
Q ss_pred C-------C--CCcceEEEEEec
Q psy6130 134 P-------K--AGYAGVGLYTKV 147 (295)
Q Consensus 134 ~-------~--~g~~Gvailsk~ 147 (295)
+ . ..-.|++|+.+.
T Consensus 109 ~k~~~m~~~d~t~~dGc~if~k~ 131 (378)
T COG5239 109 RKVKWMIDYDTTKVDGCAIFLKR 131 (378)
T ss_pred CcccccccccccccceEEEEEEe
Confidence 2 0 123699999877
No 21
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=98.74 E-value=7.9e-08 Score=86.91 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=80.9
Q ss_pred ceEEEEEecCCcchhhhhhHHHHHhh-------cCCcE--EEEccc-CCCCCCC-----------ChhhhhcC---CCCe
Q psy6130 72 NFKIASWNVAGLRACVKKEGLDYIKK-------EDADI--FCLQET-KCHETQL-----------PPEVKMKF---PEYK 127 (295)
Q Consensus 72 ~lkI~TwNv~g~~~~~~~~~~~~i~~-------~~pDI--i~LQE~-~~~~~~~-----------~~~~~~~~---~gy~ 127 (295)
.+-|+||||++....-...+..+|.. ..||| |+|||+ ......+ ...+...+ ..|.
T Consensus 4 ~v~v~TwNv~~~~~~p~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~~l~~~~~Y~ 83 (310)
T smart00128 4 KVLVGTWNVGGLKADPKVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIESSLNGDGQYN 83 (310)
T ss_pred EEEEEEEECCCccCCChhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHHhcCCCCceE
Confidence 56799999999752112245667654 67999 669998 2211110 01111112 3343
Q ss_pred EEEecCCCCCcceEEEEEeccCce---------EEecCCCCCC-CCcceEEEEeC--CEEEEEEecCCCCCCcccHHHHH
Q psy6130 128 TYWLSSPKAGYAGVGLYTKVKPNK---------VTYGLGTKNE-HYGRNCNSNIV--NTFYIRKNVPNAGAGLKTLDKRL 195 (295)
Q Consensus 128 ~~~~~~~~~g~~Gvailsk~~~~~---------~~~~~~~~~~-~~~r~i~~~~~--~~~l~~vy~p~~~~~~~~~~~r~ 195 (295)
.... ...+.-++.|++|..... +..++..... ..+..+.+.+. .+.++++|++++... .+.|.
T Consensus 84 ~v~~--~~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~---~~~R~ 158 (310)
T smart00128 84 VLAK--VRLVGILVLVFVKANHLVYIKDVETFTVKTGMGGLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASN---VEQRN 158 (310)
T ss_pred EEee--eeecceEEEEEEehhhcCccceeEeeeeeccccceeecCceEEEEEEEcCcEEEEEeeccccccch---hhhhH
Confidence 3322 223334677777775431 1112211111 34455556665 499999999986543 34565
Q ss_pred HHHHHHHHHHHh-------hcCCCCEEEEccCCCCCC
Q psy6130 196 EWDKLFHEHLVK-------LDAEKPVILIGDLNVSHK 225 (295)
Q Consensus 196 ~~~~~l~~~l~~-------l~~~~pvIl~GDFN~~~~ 225 (295)
..+..+.+.+.- +.....+|++||||-..+
T Consensus 159 ~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~ 195 (310)
T smart00128 159 QDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD 195 (310)
T ss_pred HHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence 544544333211 113688999999997764
No 22
>KOG0620|consensus
Probab=97.97 E-value=6.1e-06 Score=75.68 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=50.4
Q ss_pred ceEEEEEecCCcch---------------hh--hhhHHHHHhhcCCcEEEEcccCCCCCCCChhhhhcCCCCeEEEecC-
Q psy6130 72 NFKIASWNVAGLRA---------------CV--KKEGLDYIKKEDADIFCLQETKCHETQLPPEVKMKFPEYKTYWLSS- 133 (295)
Q Consensus 72 ~lkI~TwNv~g~~~---------------~~--~~~~~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~~gy~~~~~~~- 133 (295)
.++|+|||+..... +. +..+++.|...+|||+|||||....+-+...+. ..||...|...
T Consensus 19 ~~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icLqev~~~~~~~~p~l~--~~gY~g~~~~k~ 96 (361)
T KOG0620|consen 19 TFTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCLQEVDRYHDFFSPELE--ASGYSGIFIEKT 96 (361)
T ss_pred eEEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeecchhhHHHHHccchhh--hcCCcceeeccc
Confidence 78999999954321 11 123677788889999999999322222222333 45996665541
Q ss_pred -----CCCCcceEEEEEeccCceE
Q psy6130 134 -----PKAGYAGVGLYTKVKPNKV 152 (295)
Q Consensus 134 -----~~~g~~Gvailsk~~~~~~ 152 (295)
..+...|+||+.|...+..
T Consensus 97 ~~~~~~~~~~dGcaiffk~s~f~l 120 (361)
T KOG0620|consen 97 RMGEVELEKIDGCAIFFKPSLFQL 120 (361)
T ss_pred ccchhhcccCceeeeeecchHHhh
Confidence 1344579999988776653
No 23
>KOG0566|consensus
Probab=97.30 E-value=0.0031 Score=63.09 Aligned_cols=151 Identities=19% Similarity=0.250 Sum_probs=74.5
Q ss_pred CCCceEEEEEecCCcchhhhhhHHHHHhhc-------CCcEE--EEcccC-CCCCC----------CChh-hhhcCCCC-
Q psy6130 69 EEPNFKIASWNVAGLRACVKKEGLDYIKKE-------DADIF--CLQETK-CHETQ----------LPPE-VKMKFPEY- 126 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~~~~~~~~~i~~~-------~pDIi--~LQE~~-~~~~~----------~~~~-~~~~~~gy- 126 (295)
+.-.+-+.||||+|.....+..+.+||--. -+||+ .|||+- ++..+ ++.+ +...+.+|
T Consensus 535 k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~tk~~~Wee~i~~~Ln~~~ 614 (1080)
T KOG0566|consen 535 KDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSASTTKRRFWEEKILKTLNRYK 614 (1080)
T ss_pred cceEEEEEeeeccCccccchhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccChHHHHHHHHHHHHHhcCCC
Confidence 344567889999994333333466776433 47865 569983 32221 1211 11113444
Q ss_pred eEEEec-CCCCCcceEEEE--EeccC---c-e-----EEecCCCCCCCCcc-eEEEEe--CCEEEEEEecCCCCCCcccH
Q psy6130 127 KTYWLS-SPKAGYAGVGLY--TKVKP---N-K-----VTYGLGTKNEHYGR-NCNSNI--VNTFYIRKNVPNAGAGLKTL 191 (295)
Q Consensus 127 ~~~~~~-~~~~g~~Gvail--sk~~~---~-~-----~~~~~~~~~~~~~r-~i~~~~--~~~~l~~vy~p~~~~~~~~~ 191 (295)
+-|..- ..+- .||+|+ .|..- + + +..+++....-.|. .|...+ ..+.+++-|+..+... .
T Consensus 615 ~kYvlL~s~Ql--vGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgNKGAVAIrf~~~~TsfCFv~SHlAAG~sn---v 689 (1080)
T KOG0566|consen 615 NKYVLLRSEQL--VGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGNKGAVAIRFVYHATSFCFVCSHLAAGQSN---V 689 (1080)
T ss_pred CceEEEehhhh--heeeEEEEEcccccchhhhcccceeecccccccCCCceEEEEEEeccccEEEEecccccccch---H
Confidence 222221 1333 477765 44421 1 1 11223321111222 233333 4799999998775543 2
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCCCEEEEccCCCCC
Q psy6130 192 DKRLEWDKLFHEHLVK-----LDAEKPVILIGDLNVSH 224 (295)
Q Consensus 192 ~~r~~~~~~l~~~l~~-----l~~~~pvIl~GDFN~~~ 224 (295)
++|..=...+.+.|.- +..+..|+.|||||-..
T Consensus 690 ~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI 727 (1080)
T KOG0566|consen 690 EERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRI 727 (1080)
T ss_pred hhhhhhHHHHHHhccccCCccccCCceEEEecccceee
Confidence 3444323333333321 23478899999999653
No 24
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=97.20 E-value=0.012 Score=57.88 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=101.8
Q ss_pred CCCCCCceEEEEEecCCcch------------------------hhh-hhHHHHHhhcCCcEEEEcccCCCC---CC---
Q psy6130 66 KLGEEPNFKIASWNVAGLRA------------------------CVK-KEGLDYIKKEDADIFCLQETKCHE---TQ--- 114 (295)
Q Consensus 66 ~~~~~~~lkI~TwNv~g~~~------------------------~~~-~~~~~~i~~~~pDIi~LQE~~~~~---~~--- 114 (295)
+......|||.++||...-. ..+ .++...|...++||+.|-|+.... ..
T Consensus 457 ~~~v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~a 536 (798)
T COG2374 457 PPDVGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDA 536 (798)
T ss_pred ccccCceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHH
Confidence 35567789999999942100 011 136677888999999999996432 11
Q ss_pred CChh---hhhc--CC-CCeEEEec-C--CCCCcceEEEEEeccCceEEec---CCCCCC--------CCcceEE------
Q psy6130 115 LPPE---VKMK--FP-EYKTYWLS-S--PKAGYAGVGLYTKVKPNKVTYG---LGTKNE--------HYGRNCN------ 168 (295)
Q Consensus 115 ~~~~---~~~~--~~-gy~~~~~~-~--~~~g~~Gvailsk~~~~~~~~~---~~~~~~--------~~~r~i~------ 168 (295)
+... +... .. .|.+.... . -....-+|+++.|.......-. .....+ ...|.-.
T Consensus 537 i~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF~~ 616 (798)
T COG2374 537 IAQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTFQD 616 (798)
T ss_pred HHHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccceEEecccccccccccccccccccccccCcchhhhhhh
Confidence 1111 1110 11 23222221 1 0112346777777643322111 100000 1112111
Q ss_pred E-EeCCEEEEEEecCCCCCCc-----------ccHHHHHHHHHHHHHHHHhhc---CCCCEEEEccCCCCCCCCCCCCCC
Q psy6130 169 S-NIVNTFYIRKNVPNAGAGL-----------KTLDKRLEWDKLFHEHLVKLD---AEKPVILIGDLNVSHKPIDLANPT 233 (295)
Q Consensus 169 ~-~~~~~~l~~vy~p~~~~~~-----------~~~~~r~~~~~~l~~~l~~l~---~~~pvIl~GDFN~~~~~~D~~~~~ 233 (295)
+ ..+.|+++.-|+-+.+... .....|.++..+|..+++... .+.+++|+||||.-..+
T Consensus 617 ~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d~~~viLGD~N~y~~e------- 689 (798)
T COG2374 617 LSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKADADIVILGDFNDYAFE------- 689 (798)
T ss_pred ccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCcccccCCCEEEEeccchhhhc-------
Confidence 1 1236888888987655431 123467777788888888642 37899999999976543
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCceeeecccCCCCCCcccc
Q psy6130 234 TNTRSAGFTIEERDSFSSLLDKGFTDSFRHLYPKRTGAYTY 274 (295)
Q Consensus 234 ~~~~~~~~~~~e~~~~~~ll~~gl~D~~r~~~p~~~~~yT~ 274 (295)
..++.|-++|+...-..+++... .|||
T Consensus 690 -------------dpI~~l~~aGy~~l~~~~~~~~~-~YSY 716 (798)
T COG2374 690 -------------DPIQALEGAGYMNLAARFHDAGD-RYSY 716 (798)
T ss_pred -------------cHHHHHhhcCchhhhhhccCCCC-ceEE
Confidence 23555555687776666665544 4665
No 25
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=86.98 E-value=1.5 Score=38.96 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=31.9
Q ss_pred CEEEEEEecCCCCCCcc--------cHHHHHHHHHHHHHHHHh-hcCCCCEEEEccCCCCCCC
Q psy6130 173 NTFYIRKNVPNAGAGLK--------TLDKRLEWDKLFHEHLVK-LDAEKPVILIGDLNVSHKP 226 (295)
Q Consensus 173 ~~~l~~vy~p~~~~~~~--------~~~~r~~~~~~l~~~l~~-l~~~~pvIl~GDFN~~~~~ 226 (295)
.|.++|+|+-+...... ....|+.-+..+...+.. +.+..++++.||||...+.
T Consensus 81 ~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld~ 143 (356)
T PTZ00312 81 VVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLDG 143 (356)
T ss_pred EEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeecc
Confidence 58899999977554321 123344322222222222 2467899999999987653
No 26
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=86.44 E-value=4.6 Score=39.66 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=30.5
Q ss_pred CCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHH-----------hhcCCCCEEEEccCCCCCC
Q psy6130 172 VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLV-----------KLDAEKPVILIGDLNVSHK 225 (295)
Q Consensus 172 ~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~-----------~l~~~~pvIl~GDFN~~~~ 225 (295)
..|.++|+|+.++... ...+.|..-+..+...+. .+.....+|++||||-..+
T Consensus 420 Ts~cFVn~HLAAg~~~-~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRId 483 (621)
T PLN03191 420 SRLCFVCSHLTSGHKD-GAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLN 483 (621)
T ss_pred cEEEEEEecccccccc-chHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCcccccc
Confidence 4799999999875432 122334332233322111 0113568999999997754
No 27
>KOG1294|consensus
Probab=85.32 E-value=2.1 Score=39.12 Aligned_cols=122 Identities=19% Similarity=0.199 Sum_probs=71.3
Q ss_pred CCcceEEEEeCCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhh-cCCCCEEEEccCCCCCCCCCCCCCCCCCCCCC
Q psy6130 162 HYGRNCNSNIVNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKL-DAEKPVILIGDLNVSHKPIDLANPTTNTRSAG 240 (295)
Q Consensus 162 ~~~r~i~~~~~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l-~~~~pvIl~GDFN~~~~~~D~~~~~~~~~~~~ 240 (295)
.+++.+..+...+.+++||.|........ .+..|...+....+.+ ..+.++++ |..+..++... .-.+..+
T Consensus 11 ~~~~~~~~~k~~~~~~~v~~~~~~~e~~~--~~~~~~~~l~~r~~~~~~~g~~~~~----~i~~~~i~~~~--~~~~~~~ 82 (335)
T KOG1294|consen 11 SEGRCVIVDKEMFVLINVYCPRNSPEISK--RRLRFAKVLHYRVEKLLKQGNRKVL----NICPWDIAGLE--ACEKFSG 82 (335)
T ss_pred ccCCeeeeecccccccceeccccCCcchh--hhhhhhhHHHHHHHHHHHhCCeeEe----ecCchhhhhhh--hhhcccc
Confidence 57888888888899999999987655422 2556666665556555 34677777 66654443211 1111112
Q ss_pred CCH--HHHHHHHHHHhCCc-eeeecccCCCCCCcccccCCCCCCCccCCCccc-ccc
Q psy6130 241 FTI--EERDSFSSLLDKGF-TDSFRHLYPKRTGAYTYWSYMSKTARSRNTGCT-NYF 293 (295)
Q Consensus 241 ~~~--~e~~~~~~ll~~gl-~D~~r~~~p~~~~~yT~~s~~~~~~~~~~~~~R-Dy~ 293 (295)
+.. .+-..+..+.+.++ +|..+..+|... .||.|.-.. ..+..+.+.+ ||+
T Consensus 83 ~~~~~~~l~d~~~~~~t~~~i~~~~~~~~~~~-~~~~~~~~~-~~~~~~y~~~~~~~ 137 (335)
T KOG1294|consen 83 DPEISSELRDLQCLLETKCTIDSGPCSHPTEK-GYTHSLLSC-ASKKDGYSGEIDYS 137 (335)
T ss_pred chhccccchhhhhhhhccceeccCcceecccC-Ccccceeec-ccccCCccceeeee
Confidence 211 11123444444444 888888888855 687765544 4455555667 774
No 28
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=84.91 E-value=0.88 Score=44.45 Aligned_cols=41 Identities=34% Similarity=0.503 Sum_probs=29.1
Q ss_pred CCCceEEEEEecCCcchhhhhhHHHHHhhcC-CcE--EEEcccC
Q psy6130 69 EEPNFKIASWNVAGLRACVKKEGLDYIKKED-ADI--FCLQETK 109 (295)
Q Consensus 69 ~~~~lkI~TwNv~g~~~~~~~~~~~~i~~~~-pDI--i~LQE~~ 109 (295)
....+-|+||||.|......-.+..||.... +|| |.|||+.
T Consensus 106 ~~~rv~v~TWNV~g~~p~~~l~l~~wl~~~~p~DiyviG~QE~v 149 (621)
T PLN03191 106 KDIRVTIGTWNVAGRLPSEDLEIEDWLSTEEPADIYIIGFQEVV 149 (621)
T ss_pred cceEEEEEEeecCCCCCcccCCHHHhccCCCCCCEEEEeeEEec
Confidence 3455779999999987654334778887654 476 5569985
No 29
>KOG1976|consensus
Probab=80.35 E-value=5.6 Score=35.55 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=33.2
Q ss_pred CCEEEEEEecCCCCCCc--------ccHHHHHHHHHHHHHHHHhh-cCCCCEEEEccCCCCCCCC
Q psy6130 172 VNTFYIRKNVPNAGAGL--------KTLDKRLEWDKLFHEHLVKL-DAEKPVILIGDLNVSHKPI 227 (295)
Q Consensus 172 ~~~~l~~vy~p~~~~~~--------~~~~~r~~~~~~l~~~l~~l-~~~~pvIl~GDFN~~~~~~ 227 (295)
..+.++|+|+=+..... ..-..|.+.++-+.+.|.+- .....++|.||||...++.
T Consensus 169 k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~ 233 (391)
T KOG1976|consen 169 KEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDST 233 (391)
T ss_pred ceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchH
Confidence 36888999885433211 11234555555554444332 2356789999999987653
No 30
>KOG1387|consensus
Probab=56.65 E-value=9.4 Score=35.07 Aligned_cols=47 Identities=23% Similarity=0.228 Sum_probs=28.1
Q ss_pred EEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhhcCCCCEEEEccCCCCCCC
Q psy6130 174 TFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVKLDAEKPVILIGDLNVSHKP 226 (295)
Q Consensus 174 ~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~l~~~~pvIl~GDFN~~~~~ 226 (295)
+-++.-|.-.++.+. |.. |.++....+..+...-+|..||||+++.+
T Consensus 46 vgfFHPYCNAGGGGE-----rVL-W~Avr~~q~k~~n~~~viYsGD~n~t~~~ 92 (465)
T KOG1387|consen 46 VGFFHPYCNAGGGGE-----RVL-WKAVRITQRKFPNNVIVIYSGDFNVTPEN 92 (465)
T ss_pred EEEecccccCCCCcc-----eeh-hHHHHHHHHhCCCceEEEEeCCCCCCHHH
Confidence 444455655555543 222 34454444444556788999999998754
No 31
>KOG0808|consensus
Probab=25.25 E-value=59 Score=28.58 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=15.9
Q ss_pred HHHHHhhcCCcEEEEcccCCC
Q psy6130 91 GLDYIKKEDADIFCLQETKCH 111 (295)
Q Consensus 91 ~~~~i~~~~pDIi~LQE~~~~ 111 (295)
+++.-.-..+.||||||.+.-
T Consensus 105 iieaaa~agvniiclqeawtm 125 (387)
T KOG0808|consen 105 IIEAAAVAGVNIICLQEAWTM 125 (387)
T ss_pred HHHHHHhcCccEEEeehhhcC
Confidence 455556679999999998743
No 32
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=23.95 E-value=1.1e+02 Score=29.12 Aligned_cols=51 Identities=10% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCEEEEEEecCCCCCCcccHHHHHHHHHHHHHHHHh-----hcCCCCEEEEccCCCCCC
Q psy6130 172 VNTFYIRKNVPNAGAGLKTLDKRLEWDKLFHEHLVK-----LDAEKPVILIGDLNVSHK 225 (295)
Q Consensus 172 ~~~~l~~vy~p~~~~~~~~~~~r~~~~~~l~~~l~~-----l~~~~pvIl~GDFN~~~~ 225 (295)
..+.+++.|+..+... .++|..-...+..-|.. +.....++++||||..-+
T Consensus 165 t~~cFv~shlaag~~N---~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRVt 220 (460)
T COG5411 165 TSFCFVNSHLAAGVNN---IEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRVT 220 (460)
T ss_pred CCcEEEecchhccccc---HHHHHHHHHHHHHheecCCCceecccceEEEecccCceee
Confidence 3688888888664432 34555333333322211 123567999999995543
No 33
>cd07577 Ph0642_like Pyrococcus horikoshii Ph0642 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup of the nitrilase superfamily. This superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. Pyrococcus horikoshii Ph0642 is a hypothetical protein belonging to this subgroup. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). This subgroup was classified as belonging to class 13, which represents proteins that at the time were difficult to place in a distinct similarity group. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=21.92 E-value=1.3e+02 Score=25.89 Aligned_cols=39 Identities=21% Similarity=0.043 Sum_probs=23.5
Q ss_pred eEEEEEecCCcc-hhhhhhHHHHHhhcCCcEEEEcccCCC
Q psy6130 73 FKIASWNVAGLR-ACVKKEGLDYIKKEDADIFCLQETKCH 111 (295)
Q Consensus 73 lkI~TwNv~g~~-~~~~~~~~~~i~~~~pDIi~LQE~~~~ 111 (295)
+-++.+|+.-.. ...-+.+.++|.+..+|+|+|+|....
T Consensus 2 ia~~Q~~~~~~d~~~N~~~~~~~i~~a~adlvvfPE~~l~ 41 (259)
T cd07577 2 VGYVQFNPKFGEVEKNLKKVESLIKGVEADLIVLPELFNT 41 (259)
T ss_pred EEEEEccCccCCHHHHHHHHHHHHHHhCCCEEEccccccc
Confidence 345566653211 111124667777767999999998654
Done!