BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6139
(69 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UBF6|RBX2_HUMAN RING-box protein 2 OS=Homo sapiens GN=RNF7 PE=1 SV=1
Length = 113
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 1 MFTLKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDK 42
MF+LKKWNAVAMWSWDVECDTCAICRVQVM A + + E+K
Sbjct: 29 MFSLKKWNAVAMWSWDVECDTCAICRVQVM-DACLRCQAENK 69
>sp|Q9WTZ1|RBX2_MOUSE RING-box protein 2 OS=Mus musculus GN=Rnf7 PE=2 SV=1
Length = 113
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 1 MFTLKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDK 42
MF+LKKWNAVAMWSWDVECDTCAICRVQVM A + + E+K
Sbjct: 29 MFSLKKWNAVAMWSWDVECDTCAICRVQVM-DACLRCQAENK 69
>sp|Q8QG64|RBX1_SALSA RING-box protein 1 OS=Salmo salar GN=rbx1 PE=2 SV=2
Length = 108
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKWNAVA+W+WD+ D CAICR +M
Sbjct: 22 FEVKKWNAVALWAWDIVVDNCAICRNHIM 50
>sp|Q9W5E1|RBX1A_DROME RING-box protein 1A OS=Drosophila melanogaster GN=Roc1a PE=1 SV=1
Length = 108
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKWNAVA+W+WD+ D CAICR +M
Sbjct: 22 FEVKKWNAVALWAWDIVVDNCAICRNHIM 50
>sp|P62878|RBX1_MOUSE E3 ubiquitin-protein ligase RBX1 OS=Mus musculus GN=Rbx1 PE=1
SV=1
Length = 108
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKWNAVA+W+WD+ D CAICR +M
Sbjct: 22 FEVKKWNAVALWAWDIVVDNCAICRNHIM 50
>sp|P62877|RBX1_HUMAN E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens GN=RBX1 PE=1
SV=1
Length = 108
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKWNAVA+W+WD+ D CAICR +M
Sbjct: 22 FEVKKWNAVALWAWDIVVDNCAICRNHIM 50
>sp|O13959|RBX1_SCHPO RING-box protein pip1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pip1 PE=1 SV=2
Length = 107
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKWNAVA+W WD+ D CAICR +M
Sbjct: 21 FEIKKWNAVALWQWDIVVDNCAICRNHIM 49
>sp|Q23457|RBX1_CAEEL RING-box protein 1 OS=Caenorhabditis elegans GN=rbx-1 PE=1 SV=1
Length = 110
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKW+AVA+W+WD++ D CAICR +M
Sbjct: 24 FEVKKWSAVALWAWDIQVDNCAICRNHIM 52
>sp|P48163|MAOX_HUMAN NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1
Length = 572
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 32 TATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
TATVYPEP++K AFV+S +Y Y + +P YSWP+
Sbjct: 526 TATVYPEPQNKEAFVRSQMYSTDYDQ-ILPDCYSWPE 561
>sp|Q8BMF3|MAON_MOUSE NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3
PE=1 SV=2
Length = 604
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 33 ATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
A+ YPEP+DK AFVKS +Y Y S+ T YSWPK
Sbjct: 562 ASYYPEPKDKEAFVKSLIYTPDYDSFSLDT-YSWPK 596
>sp|Q9M2B0|RBX1B_ARATH RING-box protein 1b OS=Arabidopsis thaliana GN=RBX1B PE=2 SV=1
Length = 115
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F LKKW+AVA+W+WD+ D CAICR +M
Sbjct: 29 FELKKWSAVALWAWDIVVDNCAICRNHIM 57
>sp|Q29558|MAOX_PIG NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2
SV=1
Length = 557
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 32 TATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
TAT+YPEP +K AFV+S +Y Y + +P YSWP+
Sbjct: 512 TATIYPEPSNKEAFVRSQMYSTDYDQ-ILPDGYSWPE 547
>sp|Q08273|RBX1_YEAST RING-box protein HRT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HRT1 PE=1 SV=1
Length = 121
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKW AVA WSWD+ D CAICR +M
Sbjct: 35 FEIKKWTAVAFWSWDIAVDNCAICRNHIM 63
>sp|Q940X7|RBX1A_ARATH RING-box protein 1a OS=Arabidopsis thaliana GN=RBX1A PE=1 SV=1
Length = 118
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +KKW+AVA+W+WD+ D CAICR +M
Sbjct: 32 FEIKKWSAVALWAWDIVVDNCAICRNHIM 60
>sp|Q54K33|RBX1_DICDI RING-box protein 1 OS=Dictyostelium discoideum GN=rbx1 PE=3 SV=1
Length = 104
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVM 30
F +K+WNAVA+W WD+ D CAICR +M
Sbjct: 18 FEVKRWNAVALWIWDIVVDNCAICRNHIM 46
>sp|Q16798|MAON_HUMAN NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3
PE=2 SV=2
Length = 604
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 33 ATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
A+ YPEP+DK AFV+S VY Y ++ SY+WPK
Sbjct: 562 ASYYPEPKDKEAFVRSLVYTPDYDSFTL-DSYTWPK 596
>sp|Q9NHX0|RBX1B_DROME RING-box protein 1B OS=Drosophila melanogaster GN=Roc1b PE=2 SV=2
Length = 122
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 2 FTLKKWNAVAMWSWDVECDTCAICRVQVMG 31
F +KKW A AMW WDV D CAICR +M
Sbjct: 37 FVVKKWVAHAMWGWDVAVDNCAICRNHIMN 66
>sp|P13697|MAOX_RAT NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2
Length = 572
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 33 ATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
ATVYPEP++K FV S +Y +Y + +P YSWP+
Sbjct: 527 ATVYPEPQNKEEFVSSQMYSTNYDQ-ILPDCYSWPE 561
>sp|P40927|MAOX_COLLI NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1
Length = 557
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 32 TATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
TA+ YP+PED AF++S VY Y+ V SY+WP+
Sbjct: 515 TASTYPQPEDLEAFIRSQVYSTDYN-CFVADSYTWPE 550
>sp|P27443|MAOM_ASCSU NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris
suum PE=1 SV=1
Length = 643
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 31 GTATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
GTA +YP+PED +V++ VY+ Y E + +Y WP+
Sbjct: 588 GTANLYPQPEDLEKYVRAQVYNTEYEE-LINATYDWPE 624
>sp|P06801|MAOX_MOUSE NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=2
Length = 572
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 33 ATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWP 67
ATVYPEP++K FV S +Y +Y + +P Y WP
Sbjct: 527 ATVYPEPQNKEEFVSSQMYSTNYDQ-ILPDCYPWP 560
>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1
Length = 557
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 32 TATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
TA+ YP+P+D AF++S +Y Y+ V SY+WP+
Sbjct: 515 TASTYPQPKDLEAFIQSQIYSTDYNS-FVADSYTWPE 550
>sp|Q9M9L0|APC11_ARATH Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana
GN=APC11 PE=1 SV=2
Length = 84
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 6 KWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+W+AVA W+WD + +TC ICR+ G P D +
Sbjct: 7 RWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLI 47
>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2
PE=1 SV=1
Length = 584
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 36 YPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
YPEPEDK +VK + Y + +P Y WP+
Sbjct: 543 YPEPEDKAKYVKERTWRSEY-DSLLPDVYEWPE 574
>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2
PE=2 SV=1
Length = 589
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 36 YPEPEDKLAFVKSFVYDYSYSEPSVPTSYSWPK 68
YPEPEDK +V+ ++ +Y +P Y WP+
Sbjct: 543 YPEPEDKARYVRERIWRSNYVS-LLPDVYDWPE 574
>sp|Q54L48|APC11_DICDI Anaphase-promoting complex subunit 11 OS=Dictyostelium discoideum
GN=anapc11 PE=3 SV=1
Length = 87
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 7 WNAVAMWSWDVECDTCAICRVQVMGTATVYPEPED 41
WN V+ W WDV + C ICR+ G P D
Sbjct: 9 WNTVSAWHWDVNEECCGICRMAFDGCCVDCKIPGD 43
>sp|P02773|FETA_RAT Alpha-fetoprotein OS=Rattus norvegicus GN=Afp PE=2 SV=1
Length = 611
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 40 EDKLAFVKSFVYDYSYSEPSVPTS 63
E+KL F+ SF+++YS + P++P S
Sbjct: 347 EEKLLFMASFLHEYSRNHPNLPVS 370
>sp|Q5R8A2|APC11_PONAB Anaphase-promoting complex subunit 11 OS=Pongo abelii GN=ANAPC11
PE=3 SV=1
Length = 84
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 4 LKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+K WN VA W W + C ICR+ G P D V
Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLV 47
>sp|Q9NYG5|APC11_HUMAN Anaphase-promoting complex subunit 11 OS=Homo sapiens GN=ANAPC11
PE=1 SV=1
Length = 84
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 4 LKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+K WN VA W W + C ICR+ G P D V
Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLV 47
>sp|Q3ZCF6|APC11_BOVIN Anaphase-promoting complex subunit 11 OS=Bos taurus GN=ANAPC11
PE=3 SV=1
Length = 84
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 4 LKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+K WN VA W W + C ICR+ G P D V
Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLV 47
>sp|Q9CPX9|APC11_MOUSE Anaphase-promoting complex subunit 11 OS=Mus musculus GN=Anapc11
PE=3 SV=1
Length = 84
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 4 LKKWNAVAMWSWDVECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+K WN VA W W + C ICR+ G P D V
Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLV 47
>sp|P02772|FETA_MOUSE Alpha-fetoprotein OS=Mus musculus GN=Afp PE=2 SV=1
Length = 605
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 40 EDKLAFVKSFVYDYSYSEPSVPTS 63
E+K+ F+ SF+++YS + P++P S
Sbjct: 341 EEKIMFMASFLHEYSRTHPNLPVS 364
>sp|Q9UT86|APC11_SCHPO Anaphase-promoting complex subunit 11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=apc11 PE=1 SV=1
Length = 94
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 6 KWNAVAMWSWDV-ECDTCAICRVQVMGTATVYPEPEDKLAFV 46
+++A+A W+WD + D C ICRV G P D V
Sbjct: 7 RYHAIANWTWDTPKDDVCGICRVPFDGCCPQCTSPGDNCPIV 48
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 14 SWDVECDTCAICRVQVMGTATVYPEPED 41
+W C TC +CR +V + PEP +
Sbjct: 138 TWLTTCSTCPVCRTEVEPRPRLEPEPRE 165
>sp|O88658|KIF1B_RAT Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1
SV=2
Length = 1816
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 25 CRVQVMGTATVYPEPEDKLAFVKSFVYDYSYSEPSVP 61
C +Q+ G +T P++ KSF +DYSY + P
Sbjct: 26 CIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSP 62
>sp|Q60575|KIF1B_MOUSE Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2
Length = 1816
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 25 CRVQVMGTATVYPEPEDKLAFVKSFVYDYSYSEPSVP 61
C +Q+ G +T P++ KSF +DYSY + P
Sbjct: 26 CIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSP 62
>sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5
Length = 1816
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 25 CRVQVMGTATVYPEPEDKLAFVKSFVYDYSYSEPSVP 61
C +Q+ G +T P++ KSF +DYSY + P
Sbjct: 26 CIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSP 62
>sp|P33173|KIF1A_MOUSE Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2
Length = 1695
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 25 CRVQVMGTATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSW 66
C +Q+ G+ T P+ KSF +DYSY + P ++
Sbjct: 26 CIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINY 67
>sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=1 SV=2
Length = 1690
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 25 CRVQVMGTATVYPEPEDKLAFVKSFVYDYSYSEPSVPTSYSW 66
C +Q+ G+ T P+ KSF +DYSY + P ++
Sbjct: 26 CIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINY 67
>sp|Q13642|FHL1_HUMAN Four and a half LIM domains protein 1 OS=Homo sapiens GN=FHL1 PE=1
SV=4
Length = 323
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 15 WDVECDTCAICRVQVMGTATVYPEPED 41
W +C TC+ C+ QV+GT + +P+ ED
Sbjct: 122 WHKDCFTCSNCK-QVIGTGSFFPKGED 147
>sp|P97447|FHL1_MOUSE Four and a half LIM domains protein 1 OS=Mus musculus GN=Fhl1 PE=2
SV=3
Length = 280
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 15 WDVECDTCAICRVQVMGTATVYPEPED 41
W +C TC+ C+ QV+GT + +P+ ED
Sbjct: 122 WHKDCFTCSNCK-QVIGTGSFFPKGED 147
>sp|Q9WUH4|FHL1_RAT Four and a half LIM domains protein 1 OS=Rattus norvegicus GN=Fhl1
PE=2 SV=1
Length = 280
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 15 WDVECDTCAICRVQVMGTATVYPEPED 41
W +C TC+ C+ QV+GT + +P+ ED
Sbjct: 122 WHKDCFTCSNCK-QVIGTGSFFPKGED 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,874,444
Number of Sequences: 539616
Number of extensions: 866164
Number of successful extensions: 1609
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1572
Number of HSP's gapped (non-prelim): 43
length of query: 69
length of database: 191,569,459
effective HSP length: 41
effective length of query: 28
effective length of database: 169,445,203
effective search space: 4744465684
effective search space used: 4744465684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)