Query psy6142
Match_columns 483
No_of_seqs 133 out of 1985
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 18:44:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 1.7E-52 3.7E-57 412.5 36.9 423 7-465 38-472 (485)
2 KOG0254|consensus 100.0 1.4E-47 3E-52 394.9 39.3 411 29-471 89-507 (513)
3 PF00083 Sugar_tr: Sugar (and 100.0 4.8E-48 1E-52 393.7 -17.6 397 27-462 44-451 (451)
4 TIGR00887 2A0109 phosphate:H+ 100.0 7.8E-40 1.7E-44 337.1 33.3 399 24-461 51-502 (502)
5 KOG0253|consensus 100.0 7.8E-40 1.7E-44 300.7 26.7 412 11-455 101-527 (528)
6 TIGR01299 synapt_SV2 synaptic 100.0 1.2E-37 2.6E-42 326.4 35.2 419 23-455 196-741 (742)
7 PRK10077 xylE D-xylose transpo 100.0 8.9E-37 1.9E-41 313.3 40.5 407 11-464 35-474 (479)
8 TIGR00898 2A0119 cation transp 100.0 4.1E-36 8.9E-41 310.4 34.8 377 28-457 126-504 (505)
9 KOG0255|consensus 100.0 4.8E-35 1E-39 303.2 37.4 394 21-463 110-508 (521)
10 KOG0252|consensus 100.0 1.2E-36 2.5E-41 288.5 16.6 400 26-465 81-515 (538)
11 TIGR00879 SP MFS transporter, 100.0 5.1E-33 1.1E-37 284.6 36.7 407 19-457 61-480 (481)
12 PRK10642 proline/glycine betai 100.0 2.9E-32 6.3E-37 279.9 31.8 352 35-454 63-436 (490)
13 PRK10406 alpha-ketoglutarate t 100.0 7.3E-28 1.6E-32 243.6 32.5 135 36-170 70-224 (432)
14 PRK09952 shikimate transporter 100.0 4.1E-27 9E-32 238.3 33.5 340 37-451 72-436 (438)
15 PRK12307 putative sialic acid 100.0 2.6E-26 5.7E-31 232.1 29.5 337 23-427 47-388 (426)
16 TIGR02332 HpaX 4-hydroxyphenyl 99.9 5E-26 1.1E-30 228.6 26.8 357 22-435 36-409 (412)
17 TIGR00903 2A0129 major facilit 99.9 3.2E-25 6.9E-30 218.6 30.8 147 23-170 20-171 (368)
18 TIGR00891 2A0112 putative sial 99.9 4.7E-25 1E-29 221.1 31.8 351 22-429 40-398 (405)
19 PRK15075 citrate-proton sympor 99.9 4.9E-25 1.1E-29 223.1 32.0 343 40-459 67-431 (434)
20 PRK11551 putative 3-hydroxyphe 99.9 4.4E-25 9.5E-30 221.7 28.5 344 22-443 43-392 (406)
21 TIGR00893 2A0114 d-galactonate 99.9 4.2E-25 9E-30 220.2 26.8 365 23-443 23-395 (399)
22 PRK03545 putative arabinose tr 99.9 2.9E-24 6.3E-29 214.6 32.1 337 22-446 37-379 (390)
23 PRK09705 cynX putative cyanate 99.9 3.4E-24 7.4E-29 214.0 31.8 344 23-454 38-388 (393)
24 PRK11663 regulatory protein Uh 99.9 1.4E-24 3E-29 219.8 29.0 368 22-452 51-429 (434)
25 COG2814 AraJ Arabinose efflux 99.9 7.3E-24 1.6E-28 203.7 31.8 338 21-445 40-384 (394)
26 PRK03893 putative sialic acid 99.9 3.1E-24 6.7E-29 221.3 30.5 379 23-436 49-442 (496)
27 PRK09556 uhpT sugar phosphate 99.9 1.8E-24 3.8E-29 221.1 26.3 359 22-443 57-445 (467)
28 TIGR00890 2A0111 Oxalate/Forma 99.9 2.3E-24 4.9E-29 213.6 26.1 337 23-439 32-374 (377)
29 PRK10489 enterobactin exporter 99.9 3E-24 6.5E-29 216.4 26.0 359 23-463 46-415 (417)
30 PRK11273 glpT sn-glycerol-3-ph 99.9 3.1E-23 6.6E-28 211.1 32.9 371 25-463 59-450 (452)
31 PRK05122 major facilitator sup 99.9 4E-23 8.6E-28 207.0 30.7 339 22-453 44-394 (399)
32 TIGR00895 2A0115 benzoate tran 99.9 3.3E-23 7.1E-28 207.0 27.3 344 22-417 45-395 (398)
33 TIGR00883 2A0106 metabolite-pr 99.9 6E-23 1.3E-27 204.7 27.9 320 39-433 45-387 (394)
34 PRK12382 putative transporter; 99.9 2.9E-22 6.4E-27 200.3 31.4 333 22-446 44-388 (392)
35 TIGR00881 2A0104 phosphoglycer 99.9 1.8E-23 3.9E-28 207.3 20.4 346 23-428 24-378 (379)
36 TIGR00712 glpT glycerol-3-phos 99.9 1.8E-22 3.8E-27 204.7 27.3 368 23-451 55-437 (438)
37 PRK10091 MFS transport protein 99.9 1.2E-21 2.6E-26 195.1 30.3 333 22-441 31-370 (382)
38 PRK15402 multidrug efflux syst 99.9 1.6E-21 3.5E-26 195.9 30.4 328 22-426 41-374 (406)
39 TIGR00899 2A0120 sugar efflux 99.9 1.9E-21 4.2E-26 193.0 30.0 336 22-443 26-370 (375)
40 cd06174 MFS The Major Facilita 99.9 2E-21 4.4E-26 190.4 29.7 315 23-443 28-348 (352)
41 TIGR00711 efflux_EmrB drug res 99.9 8E-22 1.7E-26 202.8 28.0 354 22-421 30-409 (485)
42 PRK14995 methyl viologen resis 99.9 3.1E-21 6.8E-26 198.4 31.5 353 22-419 34-410 (495)
43 PLN00028 nitrate transmembrane 99.9 6.6E-22 1.4E-26 202.2 26.2 143 22-165 64-219 (476)
44 TIGR00900 2A0121 H+ Antiporter 99.9 3.1E-21 6.6E-26 190.4 28.8 324 23-422 28-363 (365)
45 PRK10504 putative transporter; 99.9 5E-21 1.1E-25 196.1 31.0 353 22-424 38-417 (471)
46 TIGR00710 efflux_Bcr_CflA drug 99.9 8.7E-21 1.9E-25 188.9 31.9 147 22-168 33-184 (385)
47 PRK10213 nepI ribonucleoside t 99.9 8.7E-21 1.9E-25 189.5 31.7 147 22-168 48-199 (394)
48 PRK03699 putative transporter; 99.9 3.4E-21 7.4E-26 192.6 28.8 339 23-449 36-381 (394)
49 PRK10473 multidrug efflux syst 99.9 6.9E-21 1.5E-25 190.3 30.1 147 22-168 31-182 (392)
50 TIGR00894 2A0114euk Na(+)-depe 99.9 2E-21 4.4E-26 198.6 26.3 147 23-169 70-224 (465)
51 TIGR00897 2A0118 polyol permea 99.9 2.7E-20 5.9E-25 186.6 32.6 345 22-443 41-397 (402)
52 PRK11195 lysophospholipid tran 99.9 1.9E-20 4E-25 187.0 28.8 343 22-446 31-379 (393)
53 PRK11102 bicyclomycin/multidru 99.9 2.8E-20 6.1E-25 184.9 29.8 147 22-168 19-170 (377)
54 PRK15403 multidrug efflux syst 99.9 5.6E-20 1.2E-24 184.7 32.2 147 23-169 45-196 (413)
55 PRK03633 putative MFS family t 99.9 6.4E-20 1.4E-24 182.6 32.2 327 23-440 35-365 (381)
56 PRK09874 drug efflux system pr 99.9 6.9E-20 1.5E-24 184.1 31.2 331 31-446 56-397 (408)
57 PF07690 MFS_1: Major Facilita 99.9 6.6E-21 1.4E-25 187.2 23.2 321 22-413 25-352 (352)
58 TIGR00892 2A0113 monocarboxyla 99.9 5.6E-21 1.2E-25 194.4 21.6 360 22-441 47-415 (455)
59 PRK11043 putative transporter; 99.9 1.2E-19 2.5E-24 182.0 30.7 147 22-168 34-184 (401)
60 PRK08633 2-acyl-glycerophospho 99.9 1.5E-19 3.2E-24 204.9 32.5 349 27-450 45-413 (1146)
61 PRK15034 nitrate/nitrite trans 99.9 5E-19 1.1E-23 176.3 32.1 108 23-131 64-176 (462)
62 PRK10133 L-fucose transporter; 99.9 2.4E-19 5.1E-24 181.3 30.2 116 23-138 55-173 (438)
63 TIGR00886 2A0108 nitrite extru 99.9 4E-20 8.6E-25 183.0 22.2 147 22-169 30-193 (366)
64 TIGR00889 2A0110 nucleoside tr 99.8 1.2E-18 2.7E-23 175.1 30.4 359 23-453 32-408 (418)
65 PRK11010 ampG muropeptide tran 99.8 7.8E-19 1.7E-23 180.0 29.5 347 25-450 43-405 (491)
66 TIGR00896 CynX cyanate transpo 99.8 2.5E-18 5.3E-23 169.6 28.7 126 22-149 28-159 (355)
67 COG2271 UhpC Sugar phosphate p 99.8 5.4E-19 1.2E-23 168.0 22.3 358 24-445 59-432 (448)
68 PRK10054 putative transporter; 99.8 8.5E-19 1.8E-23 175.2 24.4 339 23-443 37-380 (395)
69 PRK11652 emrD multidrug resist 99.8 3.9E-18 8.5E-23 170.6 29.3 147 22-168 36-187 (394)
70 PRK15011 sugar efflux transpor 99.8 7.5E-18 1.6E-22 168.4 31.2 339 22-450 44-393 (393)
71 PRK11646 multidrug resistance 99.8 1.1E-17 2.4E-22 167.4 30.6 145 22-166 39-187 (400)
72 KOG2532|consensus 99.8 7.5E-18 1.6E-22 169.0 28.2 355 21-441 65-441 (466)
73 TIGR00885 fucP L-fucose:H+ sym 99.8 1.6E-17 3.4E-22 166.5 30.3 115 23-137 32-149 (410)
74 PRK09528 lacY galactoside perm 99.8 9.1E-18 2E-22 169.4 27.7 351 23-448 40-404 (420)
75 PF06609 TRI12: Fungal trichot 99.8 2.8E-17 6.2E-22 167.2 31.1 144 22-167 72-221 (599)
76 COG2223 NarK Nitrate/nitrite t 99.8 1.1E-17 2.3E-22 159.5 25.6 346 22-445 42-399 (417)
77 TIGR00792 gph sugar (Glycoside 99.8 1.6E-17 3.5E-22 168.5 28.8 363 22-464 28-436 (437)
78 PRK11902 ampG muropeptide tran 99.8 4.2E-17 9.2E-22 163.5 30.1 145 23-169 28-186 (402)
79 TIGR00901 2A0125 AmpG-related 99.8 1.4E-17 3.1E-22 164.2 24.8 145 22-168 16-182 (356)
80 PRK06814 acylglycerophosphoeth 99.8 2.2E-17 4.9E-22 186.8 29.8 343 29-438 52-413 (1140)
81 TIGR00882 2A0105 oligosacchari 99.8 7E-17 1.5E-21 161.6 29.2 347 23-443 32-391 (396)
82 TIGR00902 2A0127 phenyl propri 99.8 3.1E-16 6.8E-21 156.1 29.8 334 22-441 32-373 (382)
83 PRK10207 dipeptide/tripeptide 99.8 2.1E-16 4.6E-21 161.4 28.2 131 22-152 43-181 (489)
84 TIGR00924 yjdL_sub1_fam amino 99.8 1.6E-15 3.4E-20 154.9 32.9 131 23-153 42-180 (475)
85 KOG1330|consensus 99.8 1.1E-18 2.4E-23 167.4 9.1 147 22-168 61-213 (493)
86 PTZ00207 hypothetical protein; 99.8 8.6E-16 1.9E-20 157.4 29.4 159 23-183 56-226 (591)
87 PRK11128 putative 3-phenylprop 99.7 2E-15 4.3E-20 150.4 29.8 330 22-439 32-371 (382)
88 KOG2533|consensus 99.7 2.8E-16 6E-21 158.1 21.6 150 20-169 72-232 (495)
89 TIGR01301 GPH_sucrose GPH fami 99.7 2.6E-15 5.6E-20 150.8 28.1 383 23-452 33-476 (477)
90 KOG2615|consensus 99.7 2.9E-16 6.3E-21 146.9 17.7 114 27-141 66-179 (451)
91 PF05977 MFS_3: Transmembrane 99.7 6.3E-15 1.4E-19 150.5 28.8 349 25-452 41-400 (524)
92 TIGR00805 oat sodium-independe 99.7 9.7E-17 2.1E-21 168.5 15.5 116 23-138 62-228 (633)
93 PRK09584 tppB putative tripept 99.7 1.3E-14 2.9E-19 149.0 29.8 133 22-154 50-190 (500)
94 PRK10642 proline/glycine betai 99.7 4.1E-16 8.9E-21 160.4 13.6 165 25-189 282-459 (490)
95 TIGR02718 sider_RhtX_FptX side 99.7 2.2E-13 4.8E-18 136.1 30.7 342 22-441 29-385 (390)
96 TIGR00806 rfc RFC reduced fola 99.6 9.5E-15 2.1E-19 143.3 18.7 149 23-172 55-210 (511)
97 PRK10429 melibiose:sodium symp 99.6 1.7E-13 3.6E-18 140.4 26.5 108 23-130 36-155 (473)
98 KOG2504|consensus 99.6 8.4E-15 1.8E-19 148.9 16.5 371 24-448 76-476 (509)
99 PRK09669 putative symporter Ya 99.6 5E-13 1.1E-17 135.9 27.4 111 22-132 38-160 (444)
100 TIGR00788 fbt folate/biopterin 99.6 1.5E-13 3.2E-18 140.1 22.7 348 22-424 54-415 (468)
101 PF11700 ATG22: Vacuole efflux 99.5 2.4E-11 5.3E-16 123.0 33.3 353 31-453 72-473 (477)
102 KOG3764|consensus 99.5 7.2E-14 1.6E-18 131.7 13.4 143 21-163 98-245 (464)
103 COG0738 FucP Fucose permease [ 99.5 6.1E-12 1.3E-16 119.6 25.6 116 24-139 43-161 (422)
104 PF03825 Nuc_H_symport: Nucleo 99.5 4E-11 8.8E-16 119.0 31.8 349 22-451 30-399 (400)
105 PF13347 MFS_2: MFS/sugar tran 99.5 4.4E-12 9.5E-17 128.3 25.2 322 24-424 32-386 (428)
106 PRK15462 dipeptide/tripeptide 99.5 2.3E-11 5E-16 122.9 29.8 130 23-152 39-176 (493)
107 PRK09848 glucuronide transport 99.5 1.3E-11 2.8E-16 125.7 27.7 103 23-125 38-153 (448)
108 PRK11462 putative transporter; 99.4 2.5E-10 5.5E-15 116.3 30.0 112 23-134 39-162 (460)
109 COG2807 CynX Cyanate permease 99.4 1.3E-10 2.9E-15 109.1 25.1 331 22-441 40-379 (395)
110 COG2270 Permeases of the major 99.4 3.5E-10 7.5E-15 108.6 25.7 349 27-452 56-433 (438)
111 TIGR00880 2_A_01_02 Multidrug 99.4 2.5E-12 5.4E-17 108.1 8.8 132 36-167 5-141 (141)
112 COG2211 MelB Na+/melibiose sym 99.3 3.9E-09 8.4E-14 104.5 30.7 111 23-133 42-164 (467)
113 PF01306 LacY_symp: LacY proto 99.3 5.9E-10 1.3E-14 109.1 21.8 142 299-452 263-405 (412)
114 KOG4686|consensus 99.2 4E-10 8.6E-15 101.8 14.8 109 22-130 72-184 (459)
115 TIGR01299 synapt_SV2 synaptic 99.2 7.5E-11 1.6E-15 124.9 12.0 137 32-168 598-737 (742)
116 TIGR01272 gluP glucose/galacto 99.2 1.4E-08 3E-13 97.9 24.4 63 77-139 5-67 (310)
117 KOG2563|consensus 99.2 1E-08 2.3E-13 99.1 23.0 113 27-139 77-197 (480)
118 COG3104 PTR2 Dipeptide/tripept 99.0 8.8E-08 1.9E-12 94.3 24.2 129 24-152 56-193 (498)
119 PRK09528 lacY galactoside perm 99.0 7.9E-10 1.7E-14 111.6 10.0 130 26-155 259-393 (420)
120 PRK15011 sugar efflux transpor 99.0 2.9E-09 6.3E-14 106.5 13.2 142 24-166 247-392 (393)
121 cd06174 MFS The Major Facilita 99.0 4.1E-09 8.8E-14 103.0 11.8 138 25-162 207-349 (352)
122 TIGR00893 2A0114 d-galactonate 98.9 1.7E-08 3.8E-13 100.2 15.5 144 296-452 30-174 (399)
123 TIGR00880 2_A_01_02 Multidrug 98.9 2.2E-08 4.7E-13 83.8 13.0 133 305-450 8-141 (141)
124 PRK09556 uhpT sugar phosphate 98.9 6.8E-09 1.5E-13 106.3 11.8 120 23-142 288-411 (467)
125 TIGR00889 2A0110 nucleoside tr 98.9 6.2E-09 1.4E-13 104.8 11.3 139 29-167 251-405 (418)
126 PRK11551 putative 3-hydroxyphe 98.9 9.2E-09 2E-13 103.3 12.0 119 23-141 249-368 (406)
127 TIGR00887 2A0109 phosphate:H+ 98.9 4E-08 8.7E-13 101.6 16.8 145 298-450 59-227 (502)
128 PLN00028 nitrate transmembrane 98.9 6.7E-08 1.4E-12 99.1 18.1 140 298-450 74-222 (476)
129 TIGR02332 HpaX 4-hydroxyphenyl 98.9 6.4E-08 1.4E-12 97.4 17.7 143 297-452 45-194 (412)
130 TIGR00890 2A0111 Oxalate/Forma 98.9 9.6E-09 2.1E-13 101.5 11.2 130 22-151 233-368 (377)
131 PRK05122 major facilitator sup 98.9 1.3E-08 2.8E-13 102.0 12.2 136 30-165 250-389 (399)
132 PRK10473 multidrug efflux syst 98.9 5.9E-08 1.3E-12 97.0 15.9 143 298-453 41-184 (392)
133 TIGR00899 2A0120 sugar efflux 98.9 1.6E-08 3.4E-13 100.3 11.5 142 24-166 230-375 (375)
134 PRK10077 xylE D-xylose transpo 98.9 4.6E-08 1E-12 100.5 15.1 153 297-451 57-218 (479)
135 TIGR00903 2A0129 major facilit 98.9 5.3E-08 1.1E-12 96.2 14.8 142 298-452 29-170 (368)
136 TIGR00710 efflux_Bcr_CflA drug 98.8 8.5E-08 1.8E-12 95.3 16.3 144 297-453 42-186 (385)
137 PRK15403 multidrug efflux syst 98.8 5.1E-08 1.1E-12 98.1 14.5 142 298-452 54-196 (413)
138 COG2814 AraJ Arabinose efflux 98.8 9E-08 1.9E-12 93.0 15.1 150 286-448 38-189 (394)
139 PRK10213 nepI ribonucleoside t 98.8 8.4E-08 1.8E-12 95.9 15.3 141 298-451 58-199 (394)
140 TIGR00895 2A0115 benzoate tran 98.8 1.2E-07 2.6E-12 94.5 16.4 141 298-451 55-196 (398)
141 KOG2325|consensus 98.8 6.9E-08 1.5E-12 96.0 14.0 116 23-139 65-186 (488)
142 PRK11663 regulatory protein Uh 98.8 1.4E-07 3E-12 95.7 16.6 141 298-450 61-201 (434)
143 TIGR00881 2A0104 phosphoglycer 98.8 3.1E-08 6.7E-13 98.0 11.3 144 296-452 31-176 (379)
144 PRK10054 putative transporter; 98.8 2E-07 4.4E-12 93.2 17.0 141 298-451 46-186 (395)
145 PRK14995 methyl viologen resis 98.8 7.1E-08 1.5E-12 99.5 13.8 145 296-452 42-187 (495)
146 PF03209 PUCC: PUCC protein; 98.8 8.7E-06 1.9E-10 78.9 26.9 303 22-401 8-342 (403)
147 PRK10091 MFS transport protein 98.8 1E-07 2.3E-12 94.9 14.3 143 297-452 40-183 (382)
148 PRK03545 putative arabinose tr 98.8 1.4E-07 3E-12 94.2 15.2 141 298-451 47-188 (390)
149 PRK11102 bicyclomycin/multidru 98.8 1.1E-07 2.4E-12 94.3 14.2 143 297-452 28-171 (377)
150 PRK15402 multidrug efflux syst 98.8 1.2E-07 2.6E-12 95.3 14.4 142 298-452 51-193 (406)
151 KOG0254|consensus 98.8 1.7E-07 3.6E-12 97.1 15.4 138 298-450 92-232 (513)
152 PRK09874 drug efflux system pr 98.8 5.8E-08 1.3E-12 97.5 11.6 127 32-158 261-391 (408)
153 TIGR00711 efflux_EmrB drug res 98.8 5.1E-08 1.1E-12 100.3 11.4 144 297-453 39-183 (485)
154 PRK12382 putative transporter; 98.8 5.1E-08 1.1E-12 97.5 11.0 128 31-158 251-382 (392)
155 PRK09952 shikimate transporter 98.7 9.4E-08 2E-12 97.0 12.8 134 33-166 290-434 (438)
156 TIGR00892 2A0113 monocarboxyla 98.7 4E-08 8.7E-13 100.2 10.1 132 24-155 271-411 (455)
157 PRK11273 glpT sn-glycerol-3-ph 98.7 7.7E-07 1.7E-11 90.7 19.2 147 297-451 65-212 (452)
158 TIGR00891 2A0112 putative sial 98.7 7.3E-07 1.6E-11 89.2 18.6 142 297-452 49-193 (405)
159 PF07690 MFS_1: Major Facilita 98.7 8.5E-08 1.8E-12 93.9 11.3 144 296-452 33-177 (352)
160 TIGR00712 glpT glycerol-3-phos 98.7 1E-07 2.2E-12 96.8 12.0 147 297-451 63-210 (438)
161 TIGR00900 2A0121 H+ Antiporter 98.7 3E-07 6.5E-12 90.4 14.7 138 297-442 36-174 (365)
162 TIGR00879 SP MFS transporter, 98.7 2E-07 4.3E-12 95.3 13.7 145 296-451 72-220 (481)
163 PRK03893 putative sialic acid 98.7 4.9E-08 1.1E-12 100.8 9.0 127 22-148 304-436 (496)
164 TIGR00886 2A0108 nitrite extru 98.7 4.7E-07 1E-11 89.4 15.6 143 297-451 39-192 (366)
165 TIGR00894 2A0114euk Na(+)-depe 98.7 3.7E-07 8E-12 93.5 14.9 143 297-450 78-222 (465)
166 KOG0569|consensus 98.7 6.2E-07 1.3E-11 89.8 15.3 137 301-450 66-207 (485)
167 PF03137 OATP: Organic Anion T 98.6 5.8E-09 1.3E-13 107.3 -0.0 117 23-139 32-198 (539)
168 PRK10489 enterobactin exporter 98.6 2.2E-07 4.7E-12 93.8 11.3 144 24-167 254-402 (417)
169 TIGR00898 2A0119 cation transp 98.6 2.3E-07 5E-12 96.1 11.8 131 38-168 364-498 (505)
170 KOG0255|consensus 98.6 7.7E-07 1.7E-11 92.5 15.4 136 298-450 121-257 (521)
171 TIGR00902 2A0127 phenyl propri 98.6 3.6E-07 7.7E-12 91.0 12.1 114 22-136 233-347 (382)
172 PRK12307 putative sialic acid 98.6 6.2E-07 1.3E-11 90.6 13.8 125 298-435 56-181 (426)
173 KOG2532|consensus 98.6 2.2E-06 4.7E-11 86.7 17.1 167 295-471 73-244 (466)
174 PRK11652 emrD multidrug resist 98.6 2.1E-06 4.5E-11 85.9 16.8 143 297-452 45-188 (394)
175 PRK10504 putative transporter; 98.6 1.9E-06 4.1E-11 88.4 16.8 141 298-451 48-189 (471)
176 TIGR00883 2A0106 metabolite-pr 98.6 2.8E-07 6.1E-12 91.6 10.4 108 24-131 250-362 (394)
177 PRK03633 putative MFS family t 98.6 4.6E-07 1E-11 90.2 11.8 127 24-153 230-360 (381)
178 PF06609 TRI12: Fungal trichot 98.6 1.2E-06 2.7E-11 90.0 14.9 143 288-443 71-213 (599)
179 KOG2816|consensus 98.5 7E-06 1.5E-10 82.7 19.4 126 38-168 71-203 (463)
180 PRK03699 putative transporter; 98.5 3.6E-07 7.9E-12 91.4 10.1 140 24-164 236-379 (394)
181 PRK11646 multidrug resistance 98.5 1.6E-06 3.6E-11 86.8 14.8 136 301-450 52-188 (400)
182 PRK15462 dipeptide/tripeptide 98.5 2.1E-06 4.6E-11 87.2 15.0 131 299-441 49-183 (493)
183 KOG3626|consensus 98.5 1.2E-06 2.6E-11 90.9 13.1 118 23-140 126-295 (735)
184 PRK15075 citrate-proton sympor 98.5 1.1E-06 2.4E-11 89.1 12.7 117 24-140 269-391 (434)
185 KOG1330|consensus 98.5 4.4E-08 9.6E-13 95.1 2.1 151 297-460 70-222 (493)
186 PRK09705 cynX putative cyanate 98.5 1.5E-06 3.2E-11 87.0 12.9 143 24-168 235-385 (393)
187 PRK10406 alpha-ketoglutarate t 98.5 1.3E-06 2.8E-11 88.6 12.6 103 24-126 274-380 (432)
188 PRK15034 nitrate/nitrite trans 98.5 2.1E-05 4.6E-10 79.1 20.6 159 298-464 73-251 (462)
189 PF05631 DUF791: Protein of un 98.5 2.1E-05 4.5E-10 75.1 19.0 93 18-111 58-151 (354)
190 TIGR00897 2A0118 polyol permea 98.5 1.7E-06 3.6E-11 86.9 12.3 138 24-163 252-399 (402)
191 PRK11043 putative transporter; 98.4 5.2E-06 1.1E-10 83.2 15.2 140 297-450 43-183 (401)
192 PRK11128 putative 3-phenylprop 98.4 2E-06 4.4E-11 85.6 12.1 107 23-130 234-341 (382)
193 PRK08633 2-acyl-glycerophospho 98.4 1.2E-06 2.6E-11 100.0 11.8 117 24-140 263-380 (1146)
194 TIGR00792 gph sugar (Glycoside 98.4 4.8E-06 1E-10 84.5 15.0 107 28-134 256-370 (437)
195 PF01770 Folate_carrier: Reduc 98.4 2.3E-05 4.9E-10 76.8 18.8 133 38-171 50-188 (412)
196 PF11700 ATG22: Vacuole efflux 98.4 2.9E-06 6.4E-11 86.2 13.1 114 23-136 311-434 (477)
197 COG2271 UhpC Sugar phosphate p 98.4 5.4E-06 1.2E-10 80.1 13.9 142 297-450 66-209 (448)
198 KOG2615|consensus 98.4 2.7E-06 6E-11 80.7 11.3 142 298-452 71-218 (451)
199 PF03092 BT1: BT1 family; Int 98.4 6.9E-05 1.5E-09 75.7 22.1 145 21-166 17-177 (433)
200 PF05977 MFS_3: Transmembrane 98.4 1.8E-06 3.9E-11 88.7 10.8 113 23-135 248-360 (524)
201 TIGR00885 fucP L-fucose:H+ sym 98.4 6.8E-06 1.5E-10 82.6 14.6 136 296-441 39-201 (410)
202 TIGR00882 2A0105 oligosacchari 98.4 2.9E-06 6.3E-11 84.9 11.8 126 29-154 254-384 (396)
203 PRK11010 ampG muropeptide tran 98.4 3.4E-06 7.4E-11 86.8 12.3 144 23-166 252-404 (491)
204 COG0477 ProP Permeases of the 98.4 3.6E-06 7.9E-11 79.9 11.6 108 29-136 39-150 (338)
205 TIGR00901 2A0125 AmpG-related 98.3 1.2E-05 2.5E-10 79.3 15.3 131 312-452 38-183 (356)
206 PRK06814 acylglycerophosphoeth 98.3 1.8E-05 4E-10 90.3 18.5 141 300-451 57-198 (1140)
207 KOG3764|consensus 98.3 1.9E-06 4E-11 82.4 8.5 146 296-454 107-254 (464)
208 PF00083 Sugar_tr: Sugar (and 98.3 3.2E-09 6.9E-14 108.2 -11.6 142 298-450 49-194 (451)
209 COG2270 Permeases of the major 98.3 3.6E-06 7.8E-11 81.4 9.8 111 23-133 282-392 (438)
210 PF06813 Nodulin-like: Nodulin 98.3 1E-05 2.2E-10 74.5 12.0 141 24-166 32-183 (250)
211 PRK10207 dipeptide/tripeptide 98.3 1.3E-05 2.9E-10 82.2 14.2 127 299-437 54-184 (489)
212 TIGR00924 yjdL_sub1_fam amino 98.3 1.2E-05 2.7E-10 82.3 13.9 131 297-440 50-185 (475)
213 PRK11902 ampG muropeptide tran 98.2 7.7E-06 1.7E-10 82.1 11.0 138 23-160 239-385 (402)
214 PRK09584 tppB putative tripept 98.2 0.00014 2.9E-09 75.2 20.3 120 307-438 69-192 (500)
215 TIGR01272 gluP glucose/galacto 98.2 1.2E-05 2.5E-10 77.6 11.0 117 24-142 173-289 (310)
216 PRK11195 lysophospholipid tran 98.2 1.7E-05 3.7E-10 79.3 12.6 114 24-138 236-350 (393)
217 KOG0253|consensus 98.2 4.6E-06 1E-10 78.8 7.3 127 38-165 390-519 (528)
218 PRK09848 glucuronide transport 98.2 2.3E-05 5E-10 79.9 12.9 102 33-134 268-378 (448)
219 KOG3098|consensus 98.2 0.0015 3.2E-08 65.3 24.9 88 35-123 56-143 (461)
220 TIGR02718 sider_RhtX_FptX side 98.1 2.5E-05 5.3E-10 78.0 12.4 131 22-152 236-378 (390)
221 PRK10133 L-fucose transporter; 98.1 1.5E-05 3.2E-10 80.9 10.7 117 23-141 289-405 (438)
222 PTZ00207 hypothetical protein; 98.1 0.0001 2.2E-09 76.4 16.7 130 310-448 76-206 (591)
223 TIGR00788 fbt folate/biopterin 98.1 1.6E-05 3.6E-10 81.2 10.5 118 22-139 281-408 (468)
224 TIGR00896 CynX cyanate transpo 98.1 1.6E-05 3.5E-10 78.2 9.3 118 23-141 226-346 (355)
225 PRK10429 melibiose:sodium symp 98.0 5.1E-05 1.1E-09 77.9 12.7 103 29-131 266-380 (473)
226 PRK09669 putative symporter Ya 98.0 5.7E-05 1.2E-09 76.9 13.0 101 32-132 267-376 (444)
227 TIGR00805 oat sodium-independe 98.0 2.8E-05 6.2E-10 82.3 10.4 155 296-451 69-284 (633)
228 COG2223 NarK Nitrate/nitrite t 97.9 0.0002 4.4E-09 69.4 14.0 138 299-447 53-193 (417)
229 KOG2816|consensus 97.9 6E-05 1.3E-09 76.0 10.6 140 303-457 70-209 (463)
230 PF13347 MFS_2: MFS/sugar tran 97.9 3.8E-05 8.3E-10 77.7 9.3 103 29-131 260-371 (428)
231 TIGR00806 rfc RFC reduced fola 97.9 0.00095 2.1E-08 66.7 18.5 137 298-449 65-204 (511)
232 KOG2504|consensus 97.9 2.5E-05 5.5E-10 80.0 7.6 143 23-165 327-476 (509)
233 TIGR01301 GPH_sucrose GPH fami 97.8 0.00027 5.9E-09 71.7 13.1 154 298-452 42-223 (477)
234 COG2211 MelB Na+/melibiose sym 97.8 0.00052 1.1E-08 68.6 14.7 83 30-112 273-357 (467)
235 PF05978 UNC-93: Ion channel r 97.7 0.00041 8.9E-09 58.9 9.9 97 25-122 33-129 (156)
236 KOG4332|consensus 97.6 0.0012 2.5E-08 60.1 12.8 74 42-118 85-159 (454)
237 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.016 3.5E-07 61.4 23.5 111 24-134 18-140 (654)
238 KOG0252|consensus 97.6 0.00027 5.8E-09 69.2 9.4 97 298-400 87-184 (538)
239 PF03825 Nuc_H_symport: Nucleo 97.6 0.00076 1.7E-08 67.3 12.7 105 32-136 246-356 (400)
240 PRK11462 putative transporter; 97.6 0.0011 2.3E-08 67.8 13.5 82 31-112 265-348 (460)
241 KOG3762|consensus 97.5 7.8E-05 1.7E-09 74.2 3.7 133 22-154 399-536 (618)
242 PF01306 LacY_symp: LacY proto 97.5 0.0011 2.4E-08 65.4 11.4 130 29-158 259-393 (412)
243 PF02487 CLN3: CLN3 protein; 97.5 0.047 1E-06 53.8 22.4 124 39-163 69-193 (402)
244 COG0738 FucP Fucose permease [ 97.4 0.0034 7.4E-08 60.8 13.0 134 296-439 49-202 (422)
245 PF06779 DUF1228: Protein of u 97.2 0.0011 2.3E-08 49.6 6.4 64 22-85 20-83 (85)
246 KOG0637|consensus 97.2 0.0022 4.8E-08 62.9 9.6 111 36-146 74-207 (498)
247 PF12832 MFS_1_like: MFS_1 lik 97.2 0.00059 1.3E-08 50.4 4.5 48 22-69 28-75 (77)
248 KOG2533|consensus 97.1 0.0068 1.5E-07 61.8 12.8 143 298-452 84-232 (495)
249 COG3104 PTR2 Dipeptide/tripept 96.9 0.01 2.2E-07 59.2 11.9 122 310-442 76-201 (498)
250 PF06813 Nodulin-like: Nodulin 96.9 0.022 4.8E-07 52.5 12.9 112 299-418 41-153 (250)
251 KOG4686|consensus 96.7 0.0064 1.4E-07 56.0 7.9 128 23-152 294-429 (459)
252 KOG2325|consensus 96.7 0.034 7.4E-07 56.0 13.6 145 298-450 74-232 (488)
253 TIGR00939 2a57 Equilibrative N 96.6 0.46 1E-05 48.0 21.4 88 81-169 105-200 (437)
254 COG2807 CynX Cyanate permease 96.6 0.026 5.7E-07 54.1 11.2 127 22-149 236-369 (395)
255 TIGR00769 AAA ADP/ATP carrier 96.4 0.99 2.1E-05 45.9 22.0 110 28-137 42-184 (472)
256 KOG1237|consensus 96.3 1.2 2.5E-05 46.6 22.4 126 24-149 68-229 (571)
257 PF05631 DUF791: Protein of un 96.0 0.69 1.5E-05 44.7 17.6 140 301-453 75-222 (354)
258 KOG3810|consensus 96.0 0.067 1.5E-06 50.9 10.3 89 51-140 64-152 (433)
259 PF03209 PUCC: PUCC protein; 96.0 0.069 1.5E-06 52.3 10.7 108 23-130 238-349 (403)
260 KOG3762|consensus 95.7 0.024 5.1E-07 57.1 6.2 130 300-441 411-541 (618)
261 KOG2563|consensus 95.6 0.24 5.2E-06 49.1 12.8 118 296-418 80-198 (480)
262 TIGR00926 2A1704 Peptide:H+ sy 95.4 0.7 1.5E-05 49.2 16.5 132 306-442 34-177 (654)
263 KOG1479|consensus 95.3 2.9 6.3E-05 41.2 19.0 96 304-405 292-388 (406)
264 PF03092 BT1: BT1 family; Int 95.2 0.21 4.5E-06 50.6 11.7 144 301-454 28-182 (433)
265 PF13000 Acatn: Acetyl-coenzym 95.0 0.83 1.8E-05 46.0 14.4 31 106-136 142-172 (544)
266 TIGR00769 AAA ADP/ATP carrier 94.4 5.8 0.00013 40.5 19.2 110 310-420 59-189 (472)
267 PF02487 CLN3: CLN3 protein; 94.2 0.2 4.2E-06 49.6 8.1 111 27-141 279-394 (402)
268 PF06963 FPN1: Ferroportin1 (F 94.1 7.2 0.00016 39.3 26.0 105 301-407 299-403 (432)
269 PF00854 PTR2: POT family; In 93.2 9.3 0.0002 37.7 21.0 98 60-157 2-115 (372)
270 COG0477 ProP Permeases of the 91.4 4.2 9.1E-05 37.7 13.0 105 298-413 42-149 (338)
271 PF07672 MFS_Mycoplasma: Mycop 91.2 7.9 0.00017 35.7 13.5 21 114-134 2-22 (267)
272 PF03219 TLC: TLC ATP/ADP tran 90.9 3.3 7.1E-05 42.4 12.0 115 307-421 71-205 (491)
273 KOG3098|consensus 90.8 2.4 5.3E-05 42.8 10.7 92 39-131 289-401 (461)
274 PF01733 Nucleoside_tran: Nucl 90.0 0.09 1.9E-06 50.6 -0.0 37 369-405 256-293 (309)
275 PF05978 UNC-93: Ion channel r 89.7 8.8 0.00019 32.6 11.8 91 299-402 41-131 (156)
276 PF12832 MFS_1_like: MFS_1 lik 89.4 0.71 1.5E-05 34.0 4.4 36 297-332 37-72 (77)
277 PRK03612 spermidine synthase; 88.7 5.5 0.00012 41.3 11.9 84 27-110 48-138 (521)
278 PF06963 FPN1: Ferroportin1 (F 88.1 3.4 7.4E-05 41.6 9.6 115 25-143 289-417 (432)
279 TIGR00939 2a57 Equilibrative N 85.5 14 0.00031 37.3 12.6 33 299-331 49-81 (437)
280 PF01770 Folate_carrier: Reduc 84.4 28 0.00061 34.7 13.6 98 309-421 55-154 (412)
281 PF00854 PTR2: POT family; In 81.7 9.7 0.00021 37.5 9.6 75 368-442 40-118 (372)
282 PF03137 OATP: Organic Anion T 77.2 0.78 1.7E-05 47.8 0.1 117 296-412 39-193 (539)
283 PF06779 DUF1228: Protein of u 73.0 15 0.00032 27.6 5.9 48 296-343 28-75 (85)
284 KOG3880|consensus 70.2 11 0.00024 35.8 5.6 75 67-141 327-401 (409)
285 KOG0637|consensus 69.8 4.2 9E-05 40.7 3.1 77 32-108 335-411 (498)
286 KOG3574|consensus 69.6 1.2E+02 0.0027 30.1 15.5 89 46-135 80-186 (510)
287 COG5336 Uncharacterized protei 62.5 22 0.00049 27.6 5.1 33 30-62 43-76 (116)
288 PF03219 TLC: TLC ATP/ADP tran 58.3 2.3E+02 0.005 29.2 26.1 95 41-135 71-197 (491)
289 KOG1479|consensus 58.2 39 0.00084 33.6 7.3 107 31-138 284-399 (406)
290 KOG1237|consensus 53.8 1.6E+02 0.0034 31.1 11.5 137 305-441 83-239 (571)
291 KOG3880|consensus 50.2 1.2E+02 0.0025 29.2 8.6 124 42-168 75-202 (409)
292 PF10785 NADH-u_ox-rdase: NADH 47.5 20 0.00043 27.0 2.7 43 40-82 29-78 (86)
293 COG3462 Predicted membrane pro 45.5 57 0.0012 25.4 4.8 25 178-202 88-112 (117)
294 TIGR00986 3a0801s05tom22 mitoc 43.6 62 0.0013 26.8 5.1 19 387-405 60-78 (145)
295 PF01733 Nucleoside_tran: Nucl 41.6 8.2 0.00018 37.0 -0.2 103 36-139 189-305 (309)
296 KOG3626|consensus 41.1 3E+02 0.0065 29.9 11.1 148 306-454 143-349 (735)
297 COG5336 Uncharacterized protei 40.9 72 0.0016 25.0 4.8 53 390-443 36-88 (116)
298 PF06027 DUF914: Eukaryotic pr 40.6 3.4E+02 0.0074 26.3 10.6 24 302-325 174-197 (334)
299 PF07672 MFS_Mycoplasma: Mycop 39.6 2.2E+02 0.0048 26.5 8.7 100 33-133 145-254 (267)
300 PF04281 Tom22: Mitochondrial 38.8 49 0.0011 27.3 3.9 19 387-405 62-80 (137)
301 KOG4332|consensus 34.8 1.8E+02 0.004 27.4 7.3 21 308-328 85-105 (454)
302 COG3202 ATP/ADP translocase [E 33.2 5.6E+02 0.012 26.4 14.5 110 307-416 74-204 (509)
303 PRK10697 DNA-binding transcrip 32.7 68 0.0015 25.7 3.7 29 160-188 59-87 (118)
304 KOG3574|consensus 32.3 2.2E+02 0.0047 28.4 7.7 19 313-331 81-104 (510)
305 PF13000 Acatn: Acetyl-coenzym 30.3 5.2E+02 0.011 26.8 10.2 20 313-332 58-77 (544)
306 PRK03612 spermidine synthase; 29.5 6.6E+02 0.014 26.1 13.6 22 396-417 145-166 (521)
307 TIGR00930 2a30 K-Cl cotranspor 29.3 3.4E+02 0.0073 30.8 9.8 36 112-147 488-523 (953)
308 TIGR02230 ATPase_gene1 F0F1-AT 26.9 1.9E+02 0.0042 22.4 5.2 38 31-68 45-82 (100)
309 COG1268 BioY Uncharacterized c 26.8 1.6E+02 0.0035 25.8 5.3 24 38-61 91-114 (184)
310 TIGR02978 phageshock_pspC phag 25.1 1.5E+02 0.0031 24.0 4.5 11 160-170 54-64 (121)
311 PF11947 DUF3464: Protein of u 24.1 2E+02 0.0044 24.3 5.3 82 317-403 56-137 (153)
312 PF12670 DUF3792: Protein of u 23.8 3.7E+02 0.0081 21.3 8.4 36 298-333 37-72 (116)
313 PF06341 DUF1056: Protein of u 22.4 59 0.0013 22.7 1.5 42 75-117 21-62 (63)
314 PRK14229 camphor resistance pr 21.4 2.7E+02 0.0059 21.9 5.3 26 88-113 55-80 (108)
315 PF10183 ESSS: ESSS subunit of 21.3 1.3E+02 0.0029 23.5 3.6 34 421-454 55-88 (105)
316 PF11712 Vma12: Endoplasmic re 20.9 1.5E+02 0.0033 24.6 4.0 53 28-80 74-127 (142)
317 PF09925 DUF2157: Predicted me 20.8 4.9E+02 0.011 21.5 7.6 19 67-85 41-59 (145)
No 1
>KOG0569|consensus
Probab=100.00 E-value=1.7e-52 Score=412.50 Aligned_cols=423 Identities=30% Similarity=0.477 Sum_probs=339.7
Q ss_pred eeeeccccccccCCCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh---ccHH
Q psy6142 7 RADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA---NGVP 83 (483)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a---~~~~ 83 (483)
++..|.+..++|+.-.+...-....+...+++.+|.++|+++.|+++||+|||.+++++.++..+++++..++ ++++
T Consensus 38 ~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e 117 (485)
T KOG0569|consen 38 KSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFE 117 (485)
T ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3344455555566333333333446667888999999999999999999999999999999988888876664 7899
Q ss_pred HHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh------hhhhHHHHHHhhHHHHHH
Q psy6142 84 MILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------FLNWYQLAFFGACIPVPF 157 (483)
Q Consensus 84 ~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------~~~w~~~~~~~~~~~~~~ 157 (483)
+++++|++.|+..|......+.|+.|..|++.||.++.+.+++..+|.+++..++. ...|+..+....++.++.
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988865554 346888888878888888
Q ss_pred HHHHhcCcCChhhhhh-cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhch-hhHHHHHH
Q psy6142 158 LICMFLIPETPRWYIG-RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMY-MRPLLISI 235 (483)
Q Consensus 158 ~~~~~~~pESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (483)
++...++|||||||.. |||+|||++.++++++.+++..+..+..++.+++ +.+++...+.+++++++. ++++.+++
T Consensus 198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~--~~~~~~~~sl~~~~~~~~lR~~~~i~~ 275 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEE--ELEKKKQISLRQLLKNPTLRRPLLIGI 275 (485)
T ss_pred HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh--ccccccCCcHHHHhcCcchhHHHHHHH
Confidence 8889999999999988 8999999999999999875443322222221111 122234556788888654 45677888
Q ss_pred HHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHH
Q psy6142 236 GLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLI 314 (483)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 314 (483)
.+...||++|.+++....+- ..+..|. ..++.+.+...++++++.+++
T Consensus 276 ~v~~~qq~sGi~ai~~Yst~-------------------------------i~~~aG~~~~~a~~an~~~g~v~~~~t~~ 324 (485)
T KOG0569|consen 276 VVSFAQQFSGINAIFFYSTS-------------------------------IFKTAGFTPEEAQYANLGIGIVNLLSTLV 324 (485)
T ss_pred HHHHHHHhcCcceeHHHHHH-------------------------------HHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998887652211 1122222 223567899999999999999
Q ss_pred HHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccch
Q psy6142 315 ATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIR 394 (483)
Q Consensus 315 ~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R 394 (483)
+.+++||+|||++++.+..++.++...+........... ....+..+...+++.+++++|.++++|.+.+|++|++.|
T Consensus 325 ~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 325 SPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence 999999999999999999888887776655554332210 112234567788889999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhcCC
Q psy6142 395 GSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGG 465 (483)
Q Consensus 395 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~~~ 465 (483)
+.+++++...+|+..++....++++.+..|. ..|.++.+.+++..+..+.++||||+|+.+||.++++++
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999987 578899999999999999999999999999999999987
No 2
>KOG0254|consensus
Probab=100.00 E-value=1.4e-47 Score=394.86 Aligned_cols=411 Identities=33% Similarity=0.577 Sum_probs=338.8
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
.+.+|+++++.+|..+|+++.|+++|++|||++++++.+++.+|++++++++|++++.++|+++|+|.|+.....+.|++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhchHhHHHHHHHHHHHHHhhhhh-----hhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHHHHHH
Q psy6142 109 ETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL-----NWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKA 183 (483)
Q Consensus 109 E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~-----~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~ 183 (483)
|..|++.||...+..+....+|++.+..++... +||..+..+.++.++..+..+++||||+|+.++|+.+++++.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~ 248 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRS 248 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHH
Confidence 999999999999999999999999998888776 699888888888877777788899999999999999999999
Q ss_pred HHHHhCC-CcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccccccc
Q psy6142 184 LQWLRGK-DADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIV 262 (483)
Q Consensus 184 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (483)
++++++. +.+...+.++++.. ...+....+.....++++++...++..++..++.+||++|++.+.+
T Consensus 249 l~~l~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~----------- 316 (513)
T KOG0254|consen 249 LKRLRGLSPEDVEVELELLKIK-LLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFY----------- 316 (513)
T ss_pred HHHHhCCCCcchHHHHHHHHHH-HHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEe-----------
Confidence 9999994 45555555544411 1111111111223566777778889999999999999998776654
Q ss_pred cccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHH
Q psy6142 263 GFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATL 342 (483)
Q Consensus 263 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l 342 (483)
|... ..+..+...+.....++.++.+++++.++.+++||+|||++++.+...+.++.+.+
T Consensus 317 -----Y~~~---------------if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~ 376 (513)
T KOG0254|consen 317 -----YSTT---------------IFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVIL 376 (513)
T ss_pred -----ehHH---------------HHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHH
Confidence 2211 11222222222567888899999999999999999999999999999999998888
Q ss_pred HHHHhhccCCC-CccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy6142 343 GTFFYFKSTGS-DVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA 421 (483)
Q Consensus 343 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
+........+. ......+..++..+++...++.|.++++|.+.+|++|.++|+++.+++..++|...+.+...++.+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~ 456 (513)
T KOG0254|consen 377 AVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE 456 (513)
T ss_pred HHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77765543322 23344577788888889999999999999999999999999999999999999999999888888877
Q ss_pred HhCcchhHHHHHHHHHHHHH-HhhhhcccCCCCCHHHHHHHhcCCCCCCCC
Q psy6142 422 LLGTHGAFWLFGVVCLVGLF-FVIIFVPETQGKSLEDIERNLTGGGSPDGG 471 (483)
Q Consensus 422 ~~g~~~~f~i~~~~~~i~~i-~~~~~lpet~~~~l~ei~~~~~~~~~~~~~ 471 (483)
..+....|++++.++.+..+ .++++.||||++++||+++.+.++..++..
T Consensus 457 ~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~~~~~ 507 (513)
T KOG0254|consen 457 ALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIKPWKS 507 (513)
T ss_pred hccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCchhhc
Confidence 75545567777777777666 678899999999999999999876554443
No 3
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=4.8e-48 Score=393.69 Aligned_cols=397 Identities=34% Similarity=0.617 Sum_probs=296.5
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc---cHHHHHHHHHHhhhcccccccch
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN---GVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~---~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
+..+.++..++..+|..+|+++.|+++||+|||++++.+.+++.+++++.++++ |++.+.++|+++|++.|+..+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 556788999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh----hh---hHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF----LN---WYQLAFFGACIPVPFLICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~----~~---w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~ 176 (483)
+.|+.|..|+++||+...+.+.++.+|.+++..++.. .+ ||..+.++.++.++.++...++||||+|+..|+|
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence 9999999999999999999999999998777666543 24 8888888888877777777899999999999999
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhc-hhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAM-YMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
.|||++.++++++.+.+.+ +.++..+..+ ..++.+...+++++++ +.+++.....+..+++.++++....
T Consensus 204 ~~~A~~~l~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---- 274 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIEDE-EIEEIKAEKK----ESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFY---- 274 (451)
T ss_pred ccccccccccccccccccc-cccccccccc----cccccceeeeeccccccccccccccccccccccccccccccc----
Confidence 9999999998766532221 1111111101 1111114456666653 3456666555555555554332221
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
|. +.. .+..+.+.+ ...+.+.++..+++.+++.+++||+|||++++.+...+
T Consensus 275 ------------~~----~~i-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~ 326 (451)
T PF00083_consen 275 ------------YS----PSI-----------FENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLM 326 (451)
T ss_pred ------------cc----ccc-----------ccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 11 000 001111111 34456667778889999999999999999998887777
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
.++...++.......+.. ....+..++...++..+++.+.+++++.+++|++|++.|+++.+++...++++.++.+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~ 404 (451)
T PF00083_consen 327 AICSLILGIIFFLGVSSS--SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFL 404 (451)
T ss_pred cccccccccccccccccc--cccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 666655541111111110 011223334444455677888889999999999999999999999999999999888888
Q ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHh
Q psy6142 416 FNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNL 462 (483)
Q Consensus 416 ~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~ 462 (483)
.+.+.+..+....++++++++++..++.++++||||++++||+++.+
T Consensus 405 ~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 405 FPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred cccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 77777666645678888888888888888999999999999999874
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=7.8e-40 Score=337.13 Aligned_cols=399 Identities=19% Similarity=0.239 Sum_probs=266.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhcc------HHHHHHHHHHhhhccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG------VPMILAGRCVAGFCVG 97 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~------~~~l~~~R~l~G~~~g 97 (483)
...+..+.+++.+.+.+|..+|++++|+++||+|||+++.++.+++++++++++++++ ++.++++|+++|++.|
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 4456667789999999999999999999999999999999999999999999999876 7899999999999999
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh---------------------------hhhHHHHHHh
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF---------------------------LNWYQLAFFG 150 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~---------------------------~~w~~~~~~~ 150 (483)
+..+..+.|+.|.+|+++||+..++.+....+|.+++..++.. .+||..+.++
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 9999999999999999999999998888888877665544321 2599998887
Q ss_pred hHHHHHHHHHHhcCcCChhhhhhcCCHH-HHHHHHHHHhCCCcc-hhHHHHHHHHHhhccccccccCccchhhhhhhchh
Q psy6142 151 ACIPVPFLICMFLIPETPRWYIGRNKQK-QARKALQWLRGKDAD-ISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYM 228 (483)
Q Consensus 151 ~~~~~~~~~~~~~~pESp~~l~~~~~~~-~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (483)
.++.++.++..+++||||||+..|+|.| ++++.+++.++.+.+ ..++.++.+ + + +++...+.++++++...
T Consensus 211 ~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~---~-~---~~~~~~~~~~l~~~~~~ 283 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKAS---T-A---VEVPKASWSDFFTHFFK 283 (502)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchh---c-c---ccchhhhHHHHHHHHhh
Confidence 7777766677788999999999988874 577777766543211 111111110 0 0 01111245666654322
Q ss_pred hH---HHHHHH-HHHHHHhhhhHHHHHhhhhccccccccccccccCCCccccc-ccCCCCCchhhhh--hCCCC-chhHH
Q psy6142 229 RP---LLISIG-LMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMN-QMGSRVSPTEEED--AGSTI-NENYC 300 (483)
Q Consensus 229 ~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~--~~~~~-~~~~~ 300 (483)
++ ..+... ..+.+... .+.. ....|.+. +.+ ..+..... ..... .....
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~-----~y~~----------------~~~~p~i~~~~G--~~~~~~~~~~~~~~~~~~~~~ 340 (502)
T TIGR00887 284 WRHGKHLLGTAGSWFLLDIA-----FYGV----------------NLNQKVILSAIG--YSPPAATNNAYEELYKTAVGN 340 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHH-----HHcc----------------ccccHHHHHHHc--CCCCccchhHHHHHHHHHHHH
Confidence 22 122111 11211110 0000 00011110 000 00000000 00000 00112
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccch
Q psy6142 301 TIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSI 380 (483)
Q Consensus 301 ~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 380 (483)
..+..++.+++.+++++++||+|||+.++.+.+.+.++...++....... .. ......+++...++.+..++
T Consensus 341 ~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~ 412 (502)
T TIGR00887 341 LIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS------TH--GFLAIYVLAQFFANFGPNAT 412 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc------hh--HHHHHHHHHHHHHhcCCCch
Confidence 33445677789999999999999999998887766666554443221100 00 11122222233345666678
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH----------hCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 381 PWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL----------LGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 381 ~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
.+.+++|++|++.|+++.++++.+++++.++.+..++.+.+. .+...+|++++++++++.+. ++++|||
T Consensus 413 ~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 413 TFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred hhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccC
Confidence 888999999999999999999999999999999988877663 23345778888888777554 4678999
Q ss_pred CCCCHHHHHHH
Q psy6142 451 QGKSLEDIERN 461 (483)
Q Consensus 451 ~~~~l~ei~~~ 461 (483)
|++++||++++
T Consensus 492 ~~~~leei~~~ 502 (502)
T TIGR00887 492 KGKSLEELSGE 502 (502)
T ss_pred CCCCHHhhhCC
Confidence 99999999764
No 5
>KOG0253|consensus
Probab=100.00 E-value=7.8e-40 Score=300.71 Aligned_cols=412 Identities=18% Similarity=0.197 Sum_probs=295.9
Q ss_pred ccccccccCCCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHH
Q psy6142 11 HSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRC 90 (483)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~ 90 (483)
-|+.+..|+ +++.|..+++.....|+.+|+..||..+|++|||+.+.++.+...+...+.+.+||+..+++.|.
T Consensus 101 ~~~l~~~w~------~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~ 174 (528)
T KOG0253|consen 101 LPALDEVWG------PSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRA 174 (528)
T ss_pred HHHHHhhhc------hhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHH
Confidence 356666677 78889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh----hhhhhhHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 91 VAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA----GTFLNWYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~----g~~~~w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
+.|+|.|+ .+...++-.|..|...|+....+. ..+.+|.+....+ ....+||+..+....+..++....+++||
T Consensus 175 l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~E 252 (528)
T KOG0253|consen 175 LWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYE 252 (528)
T ss_pred HHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhccc
Confidence 99999999 888889999999999999987777 8888886654443 44568998877766555566677789999
Q ss_pred ChhhhhhcCCHHHHHHHHHHHhCCCcch-------hHHHHHHHHH----hhccccccccCccchhhhhhhchhhHHHHHH
Q psy6142 167 TPRWYIGRNKQKQARKALQWLRGKDADI-------SREFAEIEKM----NNEGNAAEDENSTGCSEVFKAMYMRPLLISI 235 (483)
Q Consensus 167 Sp~~l~~~~~~~~a~~~l~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (483)
||||++.||+++||.+.++++...|... ....++.++. .+......++......+++....+++++...
T Consensus 253 SpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw 332 (528)
T KOG0253|consen 253 SPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLW 332 (528)
T ss_pred CcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHH
Confidence 9999999999999999998775433211 0011111110 1111122344556677888877778888888
Q ss_pred HHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHH
Q psy6142 236 GLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIA 315 (483)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 315 (483)
++++...++.++.++......-. +-.-...+...|...+...+ -...+...+...++..+..+||.++.
T Consensus 333 ~iwfgnafsyyg~VLlttelfqs----gd~c~~~~r~~p~e~e~~~~-------c~~s~~~dYrdllitslaefPGlLIt 401 (528)
T KOG0253|consen 333 RIWFGNAFSYYGSVLLTTELFQS----GDACPLYNRFLPTELETRAN-------CPLSVAKDYRDLLITSLAEFPGLLIT 401 (528)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhc----cCccccchhcchhHHHhhhc-------CCccchhHHHHHHHHHHhhCCchhHH
Confidence 88777766666655543222111 11111111122221111000 01112234556788899999999999
Q ss_pred HHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchh
Q psy6142 316 TALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRG 395 (483)
Q Consensus 316 ~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~ 395 (483)
+.++||+|||+.+....+++.++.+.+... ... ....+..+.+.++...++ .+.|+|+.|++|+..|+
T Consensus 402 ~~iverlGRKkTMal~l~~f~iflfll~~c--~~r---------n~~tvllf~arafisg~f-qvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 402 GVIVERLGRKKTMALSLILFGIFLFLLTTC--KTR---------NAYTVLLFTARAFISGAF-QVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHh--cCc---------chhHHHHHHHHHHHhchh-eEEEEecCcccchhhhh
Confidence 999999999999877766655555443221 111 123334444445444443 67789999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCH
Q psy6142 396 SAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSL 455 (483)
Q Consensus 396 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l 455 (483)
+|.|.|+.++++++++.+... +..-.....+..+++.+++++.+.++++.-|||||++
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999998887655 3333445667778899999998988888889999875
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.2e-37 Score=326.42 Aligned_cols=419 Identities=16% Similarity=0.175 Sum_probs=277.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.+|+.+++.+|.++|++++|+++||+|||+++++++++.++++++++++++++.++++|+++|++.|+..++
T Consensus 196 ~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~ 275 (742)
T TIGR01299 196 DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPI 275 (742)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh-----------------hhhhHHHHHHhhHHHHHHHHHHhcCc
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT-----------------FLNWYQLAFFGACIPVPFLICMFLIP 165 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-----------------~~~w~~~~~~~~~~~~~~~~~~~~~p 165 (483)
..+++.|++|+++||+..+....++.+|.+++..++. ..+||..+.+..++.++.++..+++|
T Consensus 276 ~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lP 355 (742)
T TIGR01299 276 VFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMP 355 (742)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988888888887666554321 13588888777776666677778899
Q ss_pred CChhhhhhcCCHHHHHHHHHHHhCCCcc----hhHHH--HHHHHHh-hccc-c-cccc-----------------Cccch
Q psy6142 166 ETPRWYIGRNKQKQARKALQWLRGKDAD----ISREF--AEIEKMN-NEGN-A-AEDE-----------------NSTGC 219 (483)
Q Consensus 166 ESp~~l~~~~~~~~a~~~l~~~~~~~~~----~~~~~--~~~~~~~-~~~~-~-~~~~-----------------~~~~~ 219 (483)
|||+|+..++|.+||.+.++++++.+.. ....+ ++++... .++. + .+++ .+...
T Consensus 356 ESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (742)
T TIGR01299 356 ESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNF 435 (742)
T ss_pred CCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHH
Confidence 9999999999999999999998765421 11111 1111100 0000 0 0000 00135
Q ss_pred hhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH--hhhhcc------------cc-----c--------------------
Q psy6142 220 SEVFKAMYMRPLLISIGLMFFQQMSGINAVLA--SLTVSL------------GS-----M-------------------- 260 (483)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------~~-----~-------------------- 260 (483)
+++|+++++++++....+++...+..+....+ .+.... .. +
T Consensus 436 ~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (742)
T TIGR01299 436 LRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDK 515 (742)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccch
Confidence 66778888888887777776665543222211 110000 00 0
Q ss_pred ccccc------------ccccCCC--------c------cccccc--CCCCCchh--------hhhhC------CC---C
Q psy6142 261 IVGFA------------SAYTSPA--------I------PSMNQM--GSRVSPTE--------EEDAG------ST---I 295 (483)
Q Consensus 261 ~~~~~------------~~~~~~~--------l------~~~~~~--~~~~~~~~--------~~~~~------~~---~ 295 (483)
+.++. .+|.... . +.++.. ........ .+... .. .
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 595 (742)
T TIGR01299 516 FIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAY 595 (742)
T ss_pred hhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHH
Confidence 00000 0000000 0 000000 00000000 00000 00 0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
..+....+.+++.+++.+++++++||+|||++++.+.++..++.+.++... + ....++..+++..+.+
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~---------s--~~~ll~~~~l~g~~~~- 663 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN---------S--ESAMIALLCLFGGLSI- 663 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc---------c--HHHHHHHHHHHHHHHH-
Confidence 123446677899999999999999999999999887766665554433210 0 1122222222222222
Q ss_pred cccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCH
Q psy6142 376 GFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSL 455 (483)
Q Consensus 376 g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l 455 (483)
+..+..+.+++|++|++.|+++.|++...++++.++++.+.+.+... +...+|++++++.+++.+++ +++|||+++.+
T Consensus 664 ~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~-~~LPET~~~~l 741 (742)
T TIGR01299 664 AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLA-LKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHH-HhCCCCccccc
Confidence 23355678899999999999999999999999999999888766654 44567777777777766554 46799998764
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=8.9e-37 Score=313.29 Aligned_cols=407 Identities=29% Similarity=0.493 Sum_probs=283.4
Q ss_pred ccccccccCCC--CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh---------
Q psy6142 11 HSRIDANYNEY--DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA--------- 79 (483)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a--------- 79 (483)
.|.+++.|++- +|++.+..+.++..+++.+|.++|++++|+++||+|||++++.+.+++.+++++++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 114 (479)
T PRK10077 35 VESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP 114 (479)
T ss_pred HHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 35566666432 3567788899999999999999999999999999999999999999999999988874
Q ss_pred cc---HHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhH
Q psy6142 80 NG---VPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWY 144 (483)
Q Consensus 80 ~~---~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~ 144 (483)
++ ++.++++|+++|++.|+..+....++.|+.|+++||+..++.+....+|.+++++++. ..+||
T Consensus 115 ~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 194 (479)
T PRK10077 115 DNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR 194 (479)
T ss_pred cchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence 22 5678999999999999999999999999999999999999998888888776655432 24799
Q ss_pred HHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhh
Q psy6142 145 QLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFK 224 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (483)
+.+++...+.++..+..+++||||+|+..+++.|++++.+++.++.+. ..+..++..+..+.+ ++.. +..+.
T Consensus 195 ~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~---~~~~~ 266 (479)
T PRK10077 195 YMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL-ATQALQEIKHSLDHG----RKTG---GKLLM 266 (479)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh-HHHHHHHHHHHHHHh----hhhh---hhhcc
Confidence 998887766666666677899999999999999998887776654321 111112211111100 0000 00110
Q ss_pred hchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHH
Q psy6142 225 AMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTII 303 (483)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 303 (483)
..............+++..+.+...+.. |. .....+. .....+....
T Consensus 267 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------p~-----------i~~~~g~~~~~~~~~~~~ 314 (479)
T PRK10077 267 -FGVGVIVIGVMLSVFQQFVGINVVLYYA--------------------PE-----------IFKTLGASTDIALLQTII 314 (479)
T ss_pred -hhHHHHHHHHHHHHHHHHhChhHHHHHH--------------------HH-----------HHHHcCCCCchHHHHHHH
Confidence 0011112222222333333332222100 00 0011111 1123455666
Q ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhh
Q psy6142 304 VGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWL 383 (483)
Q Consensus 304 ~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 383 (483)
.+++.+++.++++++.||+|||++++.+.+.+.++.+.+....... ..........+.+..+++.++.+..+.
T Consensus 315 ~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (479)
T PRK10077 315 VGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-------APGIVALLSMLFYVAAFAMSWGPVCWV 387 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC-------cccHHHHHHHHHHHHHHhccccchhHH
Confidence 7888999999999999999999999888877666655443322111 011222333444455555555677788
Q ss_pred hhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH------HHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHH
Q psy6142 384 MMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLT------ALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLED 457 (483)
Q Consensus 384 ~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~e 457 (483)
+++|.+|++.|+++.+++..+++++..+++..++.+. +..++..+|+++++.++++.++.+++.||||++++||
T Consensus 388 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 467 (479)
T PRK10077 388 LLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEE 467 (479)
T ss_pred HhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHH
Confidence 9999999999999999999999999988887776544 3456677888888888887777777889999999999
Q ss_pred HHHHhcC
Q psy6142 458 IERNLTG 464 (483)
Q Consensus 458 i~~~~~~ 464 (483)
+++.+++
T Consensus 468 ~~~~~~~ 474 (479)
T PRK10077 468 MEALWEP 474 (479)
T ss_pred HHHHHhh
Confidence 9988864
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.1e-36 Score=310.37 Aligned_cols=377 Identities=21% Similarity=0.290 Sum_probs=265.3
Q ss_pred cchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhh
Q psy6142 28 YIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYL 107 (483)
Q Consensus 28 ~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i 107 (483)
.++.++..+++.+|.++|++++|+++||+|||++++++.++..++++++++++|++.++++|+++|++.++..+...+++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 205 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLN 205 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHh
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccchhchHhHHHHHHHHHHHHHhhhh-hhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHHHHHHHHH
Q psy6142 108 GETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF-LNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQW 186 (483)
Q Consensus 108 ~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~-~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~ 186 (483)
.|+.|+++|++..++.+....+|.+.++.++.. .+||..+++..++.++..+..+++||||+|+..+++.+++++.+++
T Consensus 206 ~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~ 285 (505)
T TIGR00898 206 TEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQR 285 (505)
T ss_pred heecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHH
Confidence 999999999999998888888887776665543 4699988887776666666668899999999999999999998887
Q ss_pred HhCCCcc-hhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcccccccccc
Q psy6142 187 LRGKDAD-ISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFA 265 (483)
Q Consensus 187 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (483)
..+.+.. ...+..+....++. .+++.....+++++++..+...+......+.. ....+...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------- 347 (505)
T TIGR00898 286 IAKINGKKLPAEVLSLSLEKDL---SSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT----AFSYYGLV----------- 347 (505)
T ss_pred HHHHcCCCCCHHHHhhhhhhhh---hhccCCCcHHHHhCChHHHHHHHHHHHHHHHH----HHHHHHHh-----------
Confidence 6543321 11111111100000 01111235567777655554443332221110 00000000
Q ss_pred ccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHH
Q psy6142 266 SAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTF 345 (483)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~ 345 (483)
+ ..+. . ..+........+++.+++.++.+++.||+|||+.+..+.+...++.+.+..
T Consensus 348 --~---~~~~---------------~--~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~- 404 (505)
T TIGR00898 348 --L---DLGN---------------L--GGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF- 404 (505)
T ss_pred --c---cccc---------------c--CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-
Confidence 0 0000 0 011244566778889999999999999999999988876655554443321
Q ss_pred HhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCc
Q psy6142 346 FYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGT 425 (483)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~ 425 (483)
. .. ...+......++...+.+.. .+..+.+.+|++|++.|+++.|+.+.+++++.++.+.... . ...+.
T Consensus 405 -~-~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~ 473 (505)
T TIGR00898 405 -V-PV------DLYFLRTALAVLGKFGITSA-FQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWL 473 (505)
T ss_pred -c-CC------CchHHHHHHHHHHHHHHHHH-HHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHH
Confidence 1 11 11122222222222222222 2455678899999999999999999999999988887776 3 33455
Q ss_pred chhHHHHHHHHHHHHHHhhhhcccCCCCCHHH
Q psy6142 426 HGAFWLFGVVCLVGLFFVIIFVPETQGKSLED 457 (483)
Q Consensus 426 ~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~e 457 (483)
..+++++++..+++.+.. +++|||++++++|
T Consensus 474 ~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 474 FLPLVLFGGLALLAGILT-LFLPETKGVPLPE 504 (505)
T ss_pred hhHHHHHHHHHHHHHHHH-HcCcCCCCCCCCC
Confidence 667888887777765544 5789999988765
No 9
>KOG0255|consensus
Probab=100.00 E-value=4.8e-35 Score=303.15 Aligned_cols=394 Identities=22% Similarity=0.238 Sum_probs=278.6
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 21 YDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
++++|.+.+...+..+++.+|..+|++++|+++||+|||+++++++++.+++++.+++++|++.+++.|+++|++.++..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 56777788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh-hhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHH
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL-NWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQ 179 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~-~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~ 179 (483)
.+..+++.|+.++++|+...++....+.+|.+.+...+.+. +||+.+++..++.++.++..++.||||||+..|||.++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred HHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHH
Confidence 99999999999999999998887677777776666666554 69999999888887777776677799999999999999
Q ss_pred HHHHHHHHhCCC---cchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHH-HHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 180 ARKALQWLRGKD---ADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLL-ISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 180 a~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
+.+.+++..+.+ .+.....+.....+.+ .....+......++++.+..++.. ......+.... ..+++..
T Consensus 270 a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~-----~y~gl~~ 343 (521)
T KOG0255|consen 270 AIKILKKIAKLNGRKLSVKELLRLELLLRPL-KLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSL-----VYYGLSL 343 (521)
T ss_pred HHHHHHHHHhhcCCCCCcHHHHHHHHHhhHh-hhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhH-----HHHhhhh
Confidence 999999876432 2222222222111111 111112223467788776444333 32222211111 1100000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
+ . .....+.+......+....++....+...|+.|||.....+....
T Consensus 344 ~-------------------------------~--~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~ 390 (521)
T KOG0255|consen 344 N-------------------------------V--SGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLA 390 (521)
T ss_pred h-------------------------------h--hhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 0 0 001123345566666789999999999999999999998887776
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
.++++..+...... ..+...+...+...+.+.++... +.+.+|++|+.+|+.+.+.++..++++.+..+..
T Consensus 391 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~ 461 (521)
T KOG0255|consen 391 GIGLLLFGWLPDDL--------GGWLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLF 461 (521)
T ss_pred HHHHHHHHHhhccc--------hhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665554332111 10223333334444455555444 7899999999999999999999998888888765
Q ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhc
Q psy6142 416 FNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLT 463 (483)
Q Consensus 416 ~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~ 463 (483)
...... ......+.+++..+.+..+++.+++|||+++++.|..++.+
T Consensus 462 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 462 PLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 543333 22222233356666666666768899999999877554444
No 10
>KOG0252|consensus
Probab=100.00 E-value=1.2e-36 Score=288.46 Aligned_cols=400 Identities=19% Similarity=0.245 Sum_probs=262.0
Q ss_pred cccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhcc-------HHHHHHHHHHhhhcccc
Q psy6142 26 INYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG-------VPMILAGRCVAGFCVGI 98 (483)
Q Consensus 26 ~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~-------~~~l~~~R~l~G~~~g~ 98 (483)
.+..-.+.+..+.++|..+|++++||++|++|||+++...++++++++++++++.. ..++++.|++.|+|+|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 34556677888899999999999999999999999999999999999999988742 34789999999999999
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh-------------------hhhHHHHHHhhHHHHHHHH
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF-------------------LNWYQLAFFGACIPVPFLI 159 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~-------------------~~w~~~~~~~~~~~~~~~~ 159 (483)
++|...++.+|..-++.||...+..-.....|++.+.+++.. .-||..+-++.++++..+.
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997654444444444433333221 1399999999999988888
Q ss_pred HHhcCcCChhhh-hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccc--cccCccchhhhhhhchhhHHHHHHH
Q psy6142 160 CMFLIPETPRWY-IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAA--EDENSTGCSEVFKAMYMRPLLISIG 236 (483)
Q Consensus 160 ~~~~~pESp~~l-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (483)
.++.+|||++|- +-.+|.++|. +++.++... ++++..+..... .+...+.+...|...+-++++-...
T Consensus 241 ~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~~~------~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~ 311 (538)
T KOG0252|consen 241 FRLKMPETARYTALVSKKLKQAA---GDMKKVLSV------DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG 311 (538)
T ss_pred hhhcCCcchhHHHHhhcCHhhhh---hcccccccc------ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 889999999995 2234444444 222222111 111111111000 0111111222222223344433333
Q ss_pred HHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHH
Q psy6142 237 LMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIA 315 (483)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~ 315 (483)
.++.-... .+.... +.+..+..+. ..|..... ... ..+.+..++.....+|+..+.
T Consensus 312 ~WFllDia-----fy~~nL------------~~s~I~~~ig-----~~~~~~~~-~~~~~vA~~~~iia~~~~vPGyw~t 368 (538)
T KOG0252|consen 312 TWFLLDIA-----FYGQNL------------FQSVIFSAIG-----VIPSANTY-HELFKVAEGNLIIAVCSTVPGYWFT 368 (538)
T ss_pred HHHhhhhh-----hhcccc------------HHHHHHHhhc-----cCCCcchH-HHHHHHHHHHHHHHHHccCCceeEE
Confidence 32221111 100000 0000000000 00000000 000 001233455556667888899
Q ss_pred HHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchh
Q psy6142 316 TALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRG 395 (483)
Q Consensus 316 ~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~ 395 (483)
.+++|++|||+..+.|+.++.+..+.++... +. . ..+.+... ...+..+..+.|.+.+..++.+|.||+++|+
T Consensus 369 v~~id~iGRk~iq~~GF~~~~i~~~~~~~~y--~~--~-~~~~Gf~v--~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 369 VYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY--NQ--L-ENTIGFVV--LYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred EEEeehhhhHHHHHhhHHHHHHHHHHHcCCc--cc--c-cccCceee--hHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 9999999999999999888777666554322 11 1 12333322 2223334456787788889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-----HhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhcCC
Q psy6142 396 SAASLATAFNWTCTFIVTKTFNDLTA-----LLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGG 465 (483)
Q Consensus 396 ~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~~~ 465 (483)
++.+++.+.+-.+++++...+.++.+ ..+...++++++.++++..+..+ ++||||++++||++++.+..
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~~leei~~e~~~~ 515 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKGKSLEEISNEEESN 515 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE-EeecccccCHHHhcChhhcc
Confidence 99999999999999999999999988 78889999999999999877664 56899999999997766643
No 11
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.1e-33 Score=284.62 Aligned_cols=407 Identities=31% Similarity=0.559 Sum_probs=278.0
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc---cHHHHHHHHHHhhhc
Q psy6142 19 NEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN---GVPMILAGRCVAGFC 95 (483)
Q Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~---~~~~l~~~R~l~G~~ 95 (483)
++..+...+..+.+++.+++.++..++.+++|+++||+|||++++.+.++..++.+++.++. +++.++++|+++|++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 140 (481)
T TIGR00879 61 TSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG 140 (481)
T ss_pred CCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Confidence 33344456789999999999999999999999999999999999999999999999996654 445899999999999
Q ss_pred ccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh-------hhhhhHHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 96 VGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG-------TFLNWYQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 96 ~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g-------~~~~w~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
.|...+....++.|..|+++|++..++.+.+..+|..+++.++ ...+||..+++.....+..++..+++||+|
T Consensus 141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 141 VGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESP 220 (481)
T ss_pred hhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999998899888877776 235799888886666666666677899999
Q ss_pred hhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhc--hhhHHHHHHHHHHHHHhhhh
Q psy6142 169 RWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAM--YMRPLLISIGLMFFQQMSGI 246 (483)
Q Consensus 169 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 246 (483)
+++..+++.+++++..++.++.+.......+...........+.+.......+.++.. ..++......+..+.+..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (481)
T TIGR00879 221 RWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGI 300 (481)
T ss_pred HHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCC
Confidence 9998888888877776665543322211111110000000000000001122222211 12333333333222222111
Q ss_pred HHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccch
Q psy6142 247 NAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRK 325 (483)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr 325 (483)
+.... ..|.+ ....+ +.....+......++.+++.++.+++.||+|||
T Consensus 301 ~~~~~--------------------~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 349 (481)
T TIGR00879 301 NAIMY--------------------YSPTI-----------FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR 349 (481)
T ss_pred eehHH--------------------HHHHH-----------HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 11110 00110 01111 112234566777888899999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHH
Q psy6142 326 ILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFN 405 (483)
Q Consensus 326 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~ 405 (483)
+.+..+...+.++...++......... ......+.......++..+++.+..++.+.+..|.+|++.|+++.++.....
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 350 PLLLIGAAGMAICLFVLGILGASFVTG-SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCC-cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHH
Confidence 998887666555554443222111110 0001123334444455566677776777788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHH
Q psy6142 406 WTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLED 457 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~e 457 (483)
.++.++.+...+.+.+..++.+.|++.+++++++.++.+++.||+|+++++|
T Consensus 429 ~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 429 WLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 9999999988888888788888899988888888787777889999888765
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.9e-32 Score=279.92 Aligned_cols=352 Identities=19% Similarity=0.199 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHH--------HHHHHHHhhhcccccccchhhh
Q psy6142 35 GSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPM--------ILAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 35 ~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~--------l~~~R~l~G~~~g~~~~~~~~~ 106 (483)
.++..+|..+|++++|+++||+|||+++.++++++.++++++++++|++. ++++|+++|++.|+..+....+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 46788999999999999999999999999999999999999999999875 8999999999999999999999
Q ss_pred hcccCCCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhc
Q psy6142 107 LGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGR 174 (483)
Q Consensus 107 i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~ 174 (483)
+.|++|+++||+..++.+....+|..++..+.. .++||..++++..+.++.++...++||||+|...+
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~ 222 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHV 222 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHH
Confidence 999999999999988888777777655443221 25799999887655555555567799999986433
Q ss_pred CCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhh
Q psy6142 175 NKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLT 254 (483)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (483)
++.++..+ + .. .++...+.++++++ ++++........+++... +.....
T Consensus 223 ~~~~~~~~--------~--------------~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~--- 271 (490)
T PRK10642 223 DKLEQGDR--------E--------------GL----QDGPKVSFKEIATK-HWRSLLTCIGLVIATNVT-YYMLLT--- 271 (490)
T ss_pred Hhhhhhcc--------c--------------cc----cccccCCHHHHHHH-hHHHHHHHHHHHHHHHHH-HHHHHH---
Confidence 22211000 0 00 00011234555554 333333332222221111 000000
Q ss_pred hccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhH
Q psy6142 255 VSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISST 333 (483)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~ 333 (483)
.+|.+.+ ...+.+ .+.........++.+++.++.+++.||+|||+.+..+.+
T Consensus 272 -----------------~~p~~l~----------~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 272 -----------------YMPSYLS----------HNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred -----------------HHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 0111100 000111 112334455567788899999999999999998877654
Q ss_pred HHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 334 AMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
...+....+ +...... .........++..++.+.+.+ ....+.+|++|++.|+++.++...+++.++.+.+
T Consensus 325 ~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p 395 (490)
T PRK10642 325 ALFVLAIPA--FILINSN------VIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTP 395 (490)
T ss_pred HHHHHHHHH--HHHHhCC------CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHH
Confidence 332222111 1111110 011122222222233333322 2345667999999999999988777777777777
Q ss_pred HHHHHHHHHhC-cchhHHHHHHHHHHHHHHhhhhcccCCCCC
Q psy6142 414 KTFNDLTALLG-THGAFWLFGVVCLVGLFFVIIFVPETQGKS 454 (483)
Q Consensus 414 ~~~~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~~lpet~~~~ 454 (483)
...+.+.+..+ +..++++..++++++.+. .+++|||+++.
T Consensus 396 ~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~~pes~~~~ 436 (490)
T PRK10642 396 TLAAWLVESTQNLMMPAYYLMVVAVIGLIT-GVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHhCCchHHHHHHHHHHHHHHHH-HHHhccccCCC
Confidence 77776665433 454555555565555443 45679986643
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=7.3e-28 Score=243.63 Aligned_cols=135 Identities=21% Similarity=0.197 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHH--------HHHHHHHHhhhcccccccchhhhh
Q psy6142 36 SLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVP--------MILAGRCVAGFCVGIASLALPVYL 107 (483)
Q Consensus 36 s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~--------~l~~~R~l~G~~~g~~~~~~~~~i 107 (483)
+...++..+|++++|+++||+|||+++..+++++.+++++++++++++ .++++|+++|++.|+..+...+++
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 345566669999999999999999999999999999999999999875 589999999999999999999999
Q ss_pred cccCCCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhHHHHHHhhHHHHHHHHHHhcCcCChhh
Q psy6142 108 GETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWYQLAFFGACIPVPFLICMFLIPETPRW 170 (483)
Q Consensus 108 ~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~ 170 (483)
.|..|+++||+..+..+.....|.+++..++. ..+||..++++..+.++.+.....+||||++
T Consensus 150 ~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~ 224 (432)
T PRK10406 150 SEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQ 224 (432)
T ss_pred HHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 99999999999888777777777655543321 3589999988777666655556678998754
No 14
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=4.1e-27 Score=238.31 Aligned_cols=340 Identities=16% Similarity=0.166 Sum_probs=208.5
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHH--------HHHHHHHHhhhcccccccchhhhhc
Q psy6142 37 LMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVP--------MILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 37 ~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~--------~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
+..++..+|+++.|+++||+|||+++..+++++.++++++++++|++ .++++|+++|++.|+.++....++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 45577889999999999999999999999999999999999999987 5899999999999999999999999
Q ss_pred ccCCCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCC
Q psy6142 109 ETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 109 E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~ 176 (483)
|+.|+++||+..+..+.+..+|.+++..... .++||..+.++..+.++.+......||||+|...+++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~ 231 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHE 231 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhh
Confidence 9999999999988888888888766543221 3589999888766655444455678999987543322
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchh-hhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCS-EVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
.++.++ + .+.. ...+++ +.........+.+.... .....
T Consensus 232 ~~~~~~-------------------------------~--~~~~~~l~~~~--~~~~~~~~~~~~~~~~~-~~~~~---- 271 (438)
T PRK09952 232 QAAAKK-------------------------------R--IPVIEALLRHP--GAFLKIIALRLCELLTM-YIVTA---- 271 (438)
T ss_pred cccccc-------------------------------c--CCHHHHHHHch--HHHHHHHHHHHHHHHHH-HHHHH----
Confidence 111000 0 0001 112211 11111111111111110 00000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTA 334 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~ 334 (483)
+ .|.+.+ +..+.+. .........++..+++.++.+++.||+|||+.+..+.+.
T Consensus 272 ------------~----~~~y~~----------~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~ 325 (438)
T PRK09952 272 ------------F----ALNYST----------QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALI 325 (438)
T ss_pred ------------H----HHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 0 000100 0000000 111234455677788889999999999999988776544
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHH-HHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNW-TCTFIVT 413 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~-~~~~~~~ 413 (483)
..++..... ...... +..+......++..++.+.. .+..+.+.+|.+|++.|+++.++...++. +++.+.+
T Consensus 326 ~~~~~~~~~--~~~~~~-----~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p 397 (438)
T PRK09952 326 GTLSAFPFF--MALEAQ-----SIFWIVFFSIMLANIAHDMV-VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTP 397 (438)
T ss_pred HHHHHHHHH--HHHHcC-----ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHH
Confidence 333222111 111110 01111122222222222222 23446788899999999999999877655 6777777
Q ss_pred HHHHHHHHHh--CcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 414 KTFNDLTALL--GTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 414 ~~~~~~~~~~--g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
...+.+.+.. ++..++.+.+++.+++.+. .+.++||+
T Consensus 398 ~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~~~~~~ 436 (438)
T PRK09952 398 FIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALLMKDNQ 436 (438)
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHHccccc
Confidence 7777776643 2455566666666665544 34567654
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=2.6e-26 Score=232.10 Aligned_cols=337 Identities=16% Similarity=0.172 Sum_probs=215.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|++.+..+.++..+++.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.+.++|+++|++.|...+.
T Consensus 47 ~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~ 126 (426)
T PRK12307 47 DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYAC 126 (426)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHH
Confidence 55678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~ 178 (483)
...++.|..|+++|++..++...+..+|.++++.+.. ..+||..+++.....+..+......||++++...+.+.+
T Consensus 127 ~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 206 (426)
T PRK12307 127 ASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK 206 (426)
T ss_pred HHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc
Confidence 9999999999999999998888888888766654432 357998887654433333333334677765532111000
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccc
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLG 258 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (483)
+ ++ ++. ..+......++.++++..+.........+... .....+..
T Consensus 207 ~----------~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------- 252 (426)
T PRK12307 207 G----------KH---------------SQS-AWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIF-GANWPIFG------- 252 (426)
T ss_pred c----------cc---------------ccc-chhhhhHHHHHHHhhchHHHHHHHHHHHHHHH-HHHHHHHH-------
Confidence 0 00 000 00000112344555444443332222111110 00000000
Q ss_pred cccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHH
Q psy6142 259 SMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILT 338 (483)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~ 338 (483)
.+|.+.+ +...+...........+++.+++.++.+++.||+|||+.+..+.+...+.
T Consensus 253 -------------~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 309 (426)
T PRK12307 253 -------------LLPTYLA----------GEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLF 309 (426)
T ss_pred -------------HHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 0111100 00000111233455667788999999999999999999887775544333
Q ss_pred HHHHHHHHhhccCCCCccccchHHHHHHHHHHHHH-hccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHH
Q psy6142 339 LATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGF-SIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFN 417 (483)
Q Consensus 339 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~ 417 (483)
...+. ..... .. ..+...++..++ ..+.....+.++.|.+|++.|+++.|+...++.+++.+++...+
T Consensus 310 ~~~~~---~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 310 IFPLF---RIPQD-------NY-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred HHHHH---HHccc-------cH-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 22211 11110 11 112222222322 23333444567789999999999999999998888888888887
Q ss_pred HHHHHhCcch
Q psy6142 418 DLTALLGTHG 427 (483)
Q Consensus 418 ~~~~~~g~~~ 427 (483)
.+.+..|...
T Consensus 379 ~l~~~~g~~~ 388 (426)
T PRK12307 379 WLGITMGLGA 388 (426)
T ss_pred HHHHcccHHH
Confidence 7777666543
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=5e-26 Score=228.55 Aligned_cols=357 Identities=13% Similarity=0.178 Sum_probs=216.8
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+++.++..++++..|+++||+|||+++..+++++.++++++++++|++.++++|+++|++.|+..+
T Consensus 36 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 115 (412)
T TIGR02332 36 KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLP 115 (412)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHH
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----------hhhhHHHHHHhhHHHHHH-HHHHhcCcCChh-
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----------FLNWYQLAFFGACIPVPF-LICMFLIPETPR- 169 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----------~~~w~~~~~~~~~~~~~~-~~~~~~~pESp~- 169 (483)
....++.|++|+++|++..++.+....+|..+++.++. ..+||..+++...+.++. ++..+++||+|+
T Consensus 116 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~ 195 (412)
T TIGR02332 116 GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDK 195 (412)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCccc
Confidence 99999999999999999988888888877666554432 248999998866665443 345567899994
Q ss_pred --hhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhH
Q psy6142 170 --WYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGIN 247 (483)
Q Consensus 170 --~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (483)
|+..++ +++.++.+ ++...+.+ + .++. .+ +.....+...+....+.........++ ...+..
T Consensus 196 ~~~l~~~~-~~~~~~~~---~~~~~~~~-~--------~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 259 (412)
T TIGR02332 196 AKWLDEED-KKALKEMI---DNDQLTLE-Q--------PEGA-FA-HAAMPQRSMLREIFTPAIMLYTLAYFC-LTNTLS 259 (412)
T ss_pred CCCCCHHH-HHHHHHHH---Hhcccccc-c--------cccc-cc-cccccHHHHHHHhcChHHHHHHHHHHH-HHHHHH
Confidence 332211 11111111 11000000 0 0000 00 000000111111111121111111111 111111
Q ss_pred HHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchH
Q psy6142 248 AVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKI 326 (483)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~ 326 (483)
.+.. .+|.+.+. ...+ +............++.+++.++.+++.||++||+
T Consensus 260 ~~~~--------------------~~p~~l~~---------~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 260 AINI--------------------WTPQILQS---------FNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHH--------------------HHHHHHHh---------cCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 1111 11111110 0000 0112234566677889999999999999999777
Q ss_pred HHH-HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHH
Q psy6142 327 LLY-ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFN 405 (483)
Q Consensus 327 ~l~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~ 405 (483)
... ...+.....+ .+. . .. + . .......+.++..+.... .+..+....|.+|++.|+++.|+.+.++
T Consensus 311 ~~~~~~~~~~~~~~-~~~--~--~~-~---~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~a~g~~~~~~ 378 (412)
T TIGR02332 311 HHTALPYLFAAAGW-LLA--S--AT-D---H--NLIQLLGIIMASMGSFSA-MAIFWTTPDQSISLQARAIAIAVINATG 378 (412)
T ss_pred HHHHHHHHHHHHHH-HHH--H--hc-C---C--HHHHHHHHHHHHHHhhhh-hhHHHhhcccccchHHHHHHHHHHHHhh
Confidence 532 3222222211 111 1 11 0 0 111111122222222111 1233455678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC-cchhHHHHHHH
Q psy6142 406 WTCTFIVTKTFNDLTALLG-THGAFWLFGVV 435 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~g-~~~~f~i~~~~ 435 (483)
+++.++.+...+.+.+..| +...+++++++
T Consensus 379 ~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 379 NIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999998888877777654 77777765554
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=3.2e-25 Score=218.56 Aligned_cols=147 Identities=16% Similarity=0.130 Sum_probs=118.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|++.+..+.+++.+.+.+|..++++..|+++||+|||+++..+.+....+.+....++|++.++++|+++|++.|. ...
T Consensus 20 ~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~ 98 (368)
T TIGR00903 20 DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLN 98 (368)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHH
Confidence 3447889999999999999999999999999999999988777666655544444448999999999999999986 456
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh----hhhHHHHHHhhHHHHH-HHHHHhcCcCChhh
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF----LNWYQLAFFGACIPVP-FLICMFLIPETPRW 170 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~----~~w~~~~~~~~~~~~~-~~~~~~~~pESp~~ 170 (483)
....+.|+.|+++|++..++.+....+|..++...+.. .+||..+.+...++++ .++..+++||+|++
T Consensus 99 ~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~ 171 (368)
T TIGR00903 99 AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQ 171 (368)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 66777999999999999999988888887766655543 4899988875555543 34456678999976
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.95 E-value=4.7e-25 Score=221.06 Aligned_cols=351 Identities=17% Similarity=0.143 Sum_probs=218.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++..++.++++++++++.++++|+++|++.+...+
T Consensus 40 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 119 (405)
T TIGR00891 40 GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYG 119 (405)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhh--hHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLN--WYQLAFFGACIPVPFLICMFLIPETPRWYIGRN 175 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~--w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~ 175 (483)
....++.|..|+++|++..+..+....+|..++..++. ..+ ||..+.+.....+..++....+||+|++...+.
T Consensus 120 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (405)
T TIGR00891 120 SSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHA 199 (405)
T ss_pred HHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhh
Confidence 99999999999999999998888888887665554433 223 888887765555555555667899987654333
Q ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 176 KQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
+.++.++..++..+.+...+... ++.....+...++ .+...........+..... .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~---- 255 (405)
T TIGR00891 200 GKALVRTMVDILYGGEHRIANIV--------------MTLAAAMVQSAGK-RWPTFVYLVVLVLFANLYS-----H---- 255 (405)
T ss_pred hhhhhhhHHHHHhccchhhhhhh--------------hhhhHHhhhhhhh-hhHHHHHHHHHHHHHHHHH-----h----
Confidence 22222222211111100000000 0000000000000 1111111111111100000 0
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTA 334 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~ 334 (483)
.....+|.+. .+..+ +..+........+++.+++.++.+++.||+|||+.+..+...
T Consensus 256 ------------~~~~~~~~~~----------~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 313 (405)
T TIGR00891 256 ------------PIQDLLPTYL----------KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLA 313 (405)
T ss_pred ------------hhhhhhHHHH----------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHH
Confidence 0000011110 11111 111234456667788999999999999999999988766543
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTK 414 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~ 414 (483)
..+.... ... ... ..+......++... ...+..+....+..|.+|++.|+++.|+.+.++.++..+++.
T Consensus 314 ~~~~~~~--~~~-~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~ 382 (405)
T TIGR00891 314 GQLLIIP--VFA-IGA-------NVAVLGLGLFFQQM-LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPI 382 (405)
T ss_pred HHHHHHH--HHH-hCC-------chHHHHHHHHHHHH-HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHH
Confidence 3221111 111 110 11122222121111 222333444567789999999999999999999999999999
Q ss_pred HHHHHHHHhC-cchhH
Q psy6142 415 TFNDLTALLG-THGAF 429 (483)
Q Consensus 415 ~~~~~~~~~g-~~~~f 429 (483)
..+.+.+..| ++.++
T Consensus 383 ~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 383 IGALLAQRLDEYGTAL 398 (405)
T ss_pred HHHHHHHhccccchhH
Confidence 9888888877 55433
No 19
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=4.9e-25 Score=223.13 Aligned_cols=343 Identities=19% Similarity=0.243 Sum_probs=194.4
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHH--------HHHHHHHHhhhcccccccchhhhhcccC
Q psy6142 40 LSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVP--------MILAGRCVAGFCVGIASLALPVYLGETV 111 (483)
Q Consensus 40 ~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~--------~l~~~R~l~G~~~g~~~~~~~~~i~E~~ 111 (483)
++..+|+++.|+++||+|||+.++.+.+++.+++++++++++++ .++++|+++|++.|+..+....++.|+.
T Consensus 67 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 146 (434)
T PRK15075 67 LMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA 146 (434)
T ss_pred HHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC
Confidence 33357899999999999999999999999999999999999987 4689999999999999999999999999
Q ss_pred CCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHH
Q psy6142 112 QPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQ 179 (483)
Q Consensus 112 p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~ 179 (483)
|+++|++..++......+|...+...+. ..+||..++++..+...........||++++...+++
T Consensus 147 p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--- 223 (434)
T PRK15075 147 TPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR--- 223 (434)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc---
Confidence 9999999988777665555443332222 3579988877544332222223334554322110000
Q ss_pred HHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcccc
Q psy6142 180 ARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGS 259 (483)
Q Consensus 180 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (483)
. +.....++..+ +.+...........+.. ....+..
T Consensus 224 ----------~-----------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~-------- 259 (434)
T PRK15075 224 ----------P-----------------------SMREIFRSLAA--NWRIVLAGMLMVAMTTV-SFYLITV-------- 259 (434)
T ss_pred ----------c-----------------------ccccHHHHHHH--hHHHHHHHHHHHHHHHH-HHHHHHH--------
Confidence 0 00000011111 11122221111111111 1111110
Q ss_pred ccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHH
Q psy6142 260 MIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILT 338 (483)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~ 338 (483)
..|.+.+ +..+.+ .+..+.....+++.+++.++.+++.||+|||+.++.+.......
T Consensus 260 ------------~~p~~l~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~ 317 (434)
T PRK15075 260 ------------YTPTFGK----------TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILT 317 (434)
T ss_pred ------------HHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 0111110 001111 12345566677888999999999999999999887654433221
Q ss_pred HHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHH
Q psy6142 339 LATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWT-CTFIVTKTFN 417 (483)
Q Consensus 339 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~-~~~~~~~~~~ 417 (483)
.. ......... . ... ..........++++. ..+..+.+..|.+|++.|+++.++...++.. ++.+.+...+
T Consensus 318 ~~-~~~~~~~~~--~---~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g 389 (434)
T PRK15075 318 AY-PALSWLVAA--P---SFA-RMLAVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIST 389 (434)
T ss_pred HH-HHHHHHHcC--C---chH-HHHHHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHH
Confidence 11 111111111 0 111 111111112222322 1233446788999999999999997666654 4667777777
Q ss_pred HHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHH
Q psy6142 418 DLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIE 459 (483)
Q Consensus 418 ~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~ 459 (483)
.+.+..|..+...++.+.+.++..++.+.+++.++..+|..|
T Consensus 390 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK15075 390 WLIHVTGDKAAPGYWLSFAAVCGLIATLVLYRRRGARLQAAE 431 (434)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHHHhccccchhhhhhh
Confidence 777766653221111122222223344566777777766554
No 20
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=4.4e-25 Score=221.73 Aligned_cols=344 Identities=22% Similarity=0.228 Sum_probs=218.0
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++..++.++.+++++++.+++.|+++|++.+...+
T Consensus 43 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 122 (406)
T PRK11551 43 QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALP 122 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..++......+|..+++..+. ..+|+..+++.....+... +...++||+|++...+.+
T Consensus 123 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 202 (406)
T PRK11551 123 NLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA 202 (406)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc
Confidence 99999999999999999988888888887766665543 3468887776555444333 345568999876432211
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
.++.++. .+..++....++........+. .......+..
T Consensus 203 ~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----- 241 (406)
T PRK11551 203 GKQRAPV-----------------------------------LRALFGEGRATATLLLWISYFF-TLIVLYFLLN----- 241 (406)
T ss_pred chhhhhh-----------------------------------HHHHhhhhhhhHHHHHHHHHHH-HHHHHHHHHH-----
Confidence 1110000 0011111111111111111110 0000000000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMI 336 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~ 336 (483)
+ +|.+. .+...+..+........+++.+++.++.+++.||+|||+.+..+.....
T Consensus 242 -----------~----~p~~~----------~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (406)
T PRK11551 242 -----------W----LPSLL----------VGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL 296 (406)
T ss_pred -----------H----HHHHH----------HhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 0 01110 0000111123455666678899999999999999999998876544333
Q ss_pred HHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 337 LTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
++...+. . .. ..+...+..++..++.+ +..+..+.+..|.+|++.|+++.++.+.++.++..+++...
T Consensus 297 ~~~~~~~---~--~~------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~ 364 (406)
T PRK11551 297 ASLAALA---A--AP------SFAGMLLAGFAAGLFVV-GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364 (406)
T ss_pred HHHHHHH---h--cC------cHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH
Confidence 3322111 1 10 01122222222222211 22344556788999999999999999999999998888888
Q ss_pred HHHHHHhCc-chhHHHHHHHHHHHHHHh
Q psy6142 417 NDLTALLGT-HGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 417 ~~~~~~~g~-~~~f~i~~~~~~i~~i~~ 443 (483)
+.+.+..+. ...++....+.+++.+..
T Consensus 365 g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 365 GQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred hhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 877665333 333444444444444433
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=4.2e-25 Score=220.17 Aligned_cols=365 Identities=15% Similarity=0.208 Sum_probs=225.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.+++.+++.++.+++.++.|+++||+|||+++..+.++..++.++.++++|++.+.++|+++|++.+...+.
T Consensus 23 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 102 (399)
T TIGR00893 23 DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPG 102 (399)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhH
Confidence 45578889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHH-HHhcCcCChhhhhhcCCH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLI-CMFLIPETPRWYIGRNKQ 177 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~-~~~~~pESp~~l~~~~~~ 177 (483)
...++.|..|+++|++..+..+....+|.++++.++. ..+||..+.....+.+...+ ..++.||+|+.- +...
T Consensus 103 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 180 (399)
T TIGR00893 103 IILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA--KWLT 180 (399)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc--ccCC
Confidence 9999999999999999988888888888766654443 24788887766555544333 344567765321 1111
Q ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcc
Q psy6142 178 KQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSL 257 (483)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (483)
++.++... . +..+ +.+..+++++.....++.++++. ........+...... .....
T Consensus 181 ~~~~~~~~--~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~------ 236 (399)
T TIGR00893 181 EEEKYIVV--G-----------GLLA-EQQGKGPSTPKKYQIKELLKDRR---VWGLALGQFLVNIGL-GFFLT------ 236 (399)
T ss_pred HHHHhhcc--h-----------hhcc-ccccccccCCCccchHHHhcCHH---HHHHHHHHHHHHhHH-HHHHH------
Confidence 11110000 0 0000 00000011111223344444322 221111111111110 00000
Q ss_pred ccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH-HhHHH
Q psy6142 258 GSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI-SSTAM 335 (483)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~-~~~~~ 335 (483)
+ .|.+. .+..+. ..+..+......++.+++.++.+++.||+|||+.... .....
T Consensus 237 ----------~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (399)
T TIGR00893 237 ----------W----FPTYL----------VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTA 292 (399)
T ss_pred ----------H----HHHHH----------HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Confidence 0 00000 001111 1123455666778889999999999999999962111 11111
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
..+............. ....+... ......+++.+..+..+.+..|.+|++.|+++.++.+.+..++..+++..
T Consensus 293 ~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i 366 (399)
T TIGR00893 293 IIAGLVLSLLMFATNY----VNIPYAAL--ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIV 366 (399)
T ss_pred HHHHHHHHHHHHHhcc----chhHHHHH--HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHH
Confidence 1111111111111110 01111111 11122233334456667888999999999999999999998999999888
Q ss_pred HHHHHHHhC-cchhHHHHHHHHHHHHHHh
Q psy6142 416 FNDLTALLG-THGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 416 ~~~~~~~~g-~~~~f~i~~~~~~i~~i~~ 443 (483)
.+.+.+..| +...+++.+++++++.+..
T Consensus 367 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 367 IGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 888887777 7777877777776665544
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.9e-24 Score=214.56 Aligned_cols=337 Identities=15% Similarity=0.145 Sum_probs=220.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.+|..+.+.++..++.+..|+++||+|||+++..+.+++.++++++++++|++.++++|+++|++.+...+
T Consensus 37 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 116 (390)
T PRK03545 37 QSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWS 116 (390)
T ss_pred hHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..++.+....+|..+++.++ ...+||..+++.....++.. ....++||.|+ .+
T Consensus 117 ~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~-----~~ 191 (390)
T PRK03545 117 ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS-----EH 191 (390)
T ss_pred HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CC
Confidence 8999999999999999998888888877766655444 34589988877666554443 33345676542 00
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
. +..+ ...+.+|++..+.................+
T Consensus 192 ~-~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 226 (390)
T PRK03545 192 S-GSLK-----------------------------------SLPLLFRRPALVSLYLLTVVVVTAHFTAYS--------- 226 (390)
T ss_pred c-chHH-----------------------------------HHHHHHhCcHHHHHHHHHHHHHHHHHHHHH---------
Confidence 0 0000 012233333322222111111110100000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
+ ++.+ ..+..+ +..+..+.....+++.+++.++.+++.||+|||...+.. ...
T Consensus 227 -----------~----~~~~----------l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~-~~~ 280 (390)
T PRK03545 227 -----------Y----IEPF----------VQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAI-ALL 280 (390)
T ss_pred -----------H----HHHH----------HHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHH
Confidence 0 0000 000011 111234556667788999999999999999988754332 222
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
..+...+. .. .+ ..+......++++++. .+..+....+..|..| +.|+++.++.+.....+..+++..
T Consensus 281 ~~~~~~l~--~~--~~------~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 281 LVCLLLLL--PA--AN------SEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred HHHHHHHH--HH--hc------hHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 10 10 1122222333333332 1222333345667766 688999999988888888888888
Q ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHhhhh
Q psy6142 416 FNDLTALLGTHGAFWLFGVVCLVGLFFVIIF 446 (483)
Q Consensus 416 ~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~ 446 (483)
.+.+.+..|++.+|++.+.+.+++.+.....
T Consensus 349 ~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 349 GNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899888888888777776655443
No 23
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=3.4e-24 Score=214.03 Aligned_cols=344 Identities=13% Similarity=0.103 Sum_probs=213.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|++.+..+.++..+++.++..+++++.|+++||+|||+++..+++++.++.+++++++|++.++++|+++|++.+...+.
T Consensus 38 ~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~ 117 (393)
T PRK09705 38 ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAV 117 (393)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhh
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----h-hhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----F-LNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQ 177 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~-~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~ 177 (483)
...++.|..| ++|++..+........|..++..++. . .+||..+.+.....+..++..++..+ ++.
T Consensus 118 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 188 (393)
T PRK09705 118 MPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA--------REV 188 (393)
T ss_pred hhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc--------CCC
Confidence 9999999987 77999888777665555444433332 2 37887665433332222222221111 000
Q ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcc
Q psy6142 178 KQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSL 257 (483)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (483)
++. ++ ++. ...+..+++ +.........+... +......
T Consensus 189 ~~~-------------------------~~----~~~---~~~~~l~~~---~~~~l~~~~~~~~~-~~~~~~~------ 226 (393)
T PRK09705 189 ASS-------------------------HK----TTT---TPVRVVFTP---RAWTLGVYFGLING-GYASLIA------ 226 (393)
T ss_pred ccc-------------------------cC----CCc---CCcccccCH---hHHHHHHHHHHHHH-HHHHHHH------
Confidence 000 00 000 001111211 11111111111111 1101100
Q ss_pred ccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHH
Q psy6142 258 GSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMIL 337 (483)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~ 337 (483)
+ +|.+. .+...+..+......+.+++.+++.++.+++.||+|||+....+..+..+
T Consensus 227 ----------~----lp~~l----------~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 227 ----------W----LPAFY----------IEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLV 282 (393)
T ss_pred ----------H----HHHHH----------HHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHH
Confidence 0 01110 01111112234556677889999999999999999999988777544444
Q ss_pred HHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccC-CccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 338 TLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEIL-PAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~-P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
+...+. . ... . ... ....+..++.+... +.......+.+ |++.|++..++...++.++..+++...
T Consensus 283 ~~~~~~--~-~~~------~-~~~--~~~~l~g~g~g~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~ 349 (393)
T PRK09705 283 GFCGFI--W-LPL------Q-LPV--LWAMVCGLGLGGAF-PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFS 349 (393)
T ss_pred HHHHHH--H-ccc------h-HHH--HHHHHHHHhccchH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332221 1 111 0 011 11222223332222 22333444555 578899999999999988888888888
Q ss_pred HHHHHHhC-cchhHHHHHHHHHHHHHHhhhhcccCCCCC
Q psy6142 417 NDLTALLG-THGAFWLFGVVCLVGLFFVIIFVPETQGKS 454 (483)
Q Consensus 417 ~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~~lpet~~~~ 454 (483)
+.+.+..| +...|++.++++++..++...+.|||+.|.
T Consensus 350 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 350 GVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 88888776 555666767777777676677889998765
No 24
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=1.4e-24 Score=219.78 Aligned_cols=368 Identities=12% Similarity=0.145 Sum_probs=222.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.++..+++.++..++.++.|+++||+|||+++.++.++..++.++.++++|++.+++.|++.|++.|...+
T Consensus 51 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 130 (434)
T PRK11663 51 ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWP 130 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccch
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hh---hhhhHHHHHHhhHHHHHH-HHHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GT---FLNWYQLAFFGACIPVPF-LICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~---~~~w~~~~~~~~~~~~~~-~~~~~~~pESp~~l~~~~~ 176 (483)
....++.|++|+++|++..++.+....+|..+++.+ +. ..+||..+.+..++.+.. ++..+++||+|++...+.+
T Consensus 131 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~ 210 (434)
T PRK11663 131 VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSV 210 (434)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCc
Confidence 999999999999999999888887777776554433 22 357998887765554433 3345567998865311111
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhh-chhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKA-MYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
.++.++ . ++..+ + . + +...+.++.+++ ..+++.........+........+..
T Consensus 211 ~~~~~~----------~-----~~~~~--~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 264 (434)
T PRK11663 211 GEWRHD----------A-----LELAQ--Q--Q--E-GAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAIND---- 264 (434)
T ss_pred cccccc----------c-----cccch--h--c--c-ccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHH----
Confidence 000000 0 00000 0 0 0 000111222211 11111111111111100000000000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcc--cch-HHHHHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRL--GRK-ILLYIS 331 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~--GRr-~~l~~~ 331 (483)
.+|.+. .+..+. ..+.........++.+++.++.+++.||+ ++| ......
T Consensus 265 ----------------~~p~~l----------~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 265 ----------------WGNLYM----------SETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred ----------------HHHHHH----------HhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 011110 000111 11223455666788899999999999998 333 322221
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc-cccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q psy6142 332 STAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI-GFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTF 410 (483)
Q Consensus 332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~ 410 (483)
...+......+ .. .... + .... ....+.+++.. +.......+..|.+|++.|+++.|+.+.++.++..
T Consensus 319 ~~~~~~~~~~~--~~-~~~~-----~-~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 387 (434)
T PRK11663 319 AAGILLSVGSL--WL-MPFA-----S-YVMQ--AACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAA 387 (434)
T ss_pred HHHHHHHHHHH--HH-cccc-----c-HHHH--HHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHH
Confidence 11111111111 11 1110 1 1111 11222233321 21223345678999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 411 IVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 411 ~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
+.+..++.+.+..|+..+|++.+++++++.+..+...+++++
T Consensus 388 ~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 388 LSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 999999988888888888888888877765544433334433
No 25
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.3e-24 Score=203.66 Aligned_cols=338 Identities=20% Similarity=0.178 Sum_probs=236.1
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 21 YDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
.+|++++..+.++..|+|-++..+|+++...++||+.||++++..+++++++.+++++++||++++++|++.|++.|...
T Consensus 40 A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~ 119 (394)
T COG2814 40 AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFW 119 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHH----HHhhhhhhhHHHHHHhhHHHHHHHH-HHhcCcCChhhhhhcC
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTC----FIAGTFLNWYQLAFFGACIPVPFLI-CMFLIPETPRWYIGRN 175 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~----~~~g~~~~w~~~~~~~~~~~~~~~~-~~~~~pESp~~l~~~~ 175 (483)
+....+..+..|+++|++..+......+++.+.+ ..+|..++||..|+....+.++.++ .+..+| |+-
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~----- 192 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE----- 192 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-----
Confidence 9999999999999999998888777777665544 4566778999999887777755544 445677 211
Q ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 176 KQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
+.++... ......+.+|++..........+.+.-++.. +
T Consensus 193 ~~~~~~~--------------------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~----f----- 231 (394)
T COG2814 193 ISGSLPG--------------------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFAL----Y----- 231 (394)
T ss_pred CCCCCCc--------------------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhh----H-----
Confidence 0000000 0000123444444433333333322222111 1
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTA 334 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~ 334 (483)
.|..+ ...+..+.+ ....+..+..+++.++|+.++|++.|| +.|+.+.....+
T Consensus 232 -----------tYi~P--------------~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 232 -----------TYIRP--------------FLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred -----------HhHHH--------------HHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHH
Confidence 12221 122222222 234678888999999999999999999 888877666555
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhh-hhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPW-LMMGEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
+......+... .. ..+...... +..++..+.....+ ...++ .-++.+..+.+++....+++..++.
T Consensus 286 ~a~~~l~l~~~---~~-------~~~~~~~~~--~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA 352 (394)
T COG2814 286 LALALLALTFT---GA-------SPALALALL--FLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGA 352 (394)
T ss_pred HHHHHHHHHHh---cc-------hHHHHHHHH--HHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHH
Confidence 55444432211 11 112222222 22444444333332 23445 5578999999999998889999999
Q ss_pred HHHHHHHHHhCcchhHHHHHHHHHHHHHHhhh
Q psy6142 414 KTFNDLTALLGTHGAFWLFGVVCLVGLFFVII 445 (483)
Q Consensus 414 ~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~ 445 (483)
.+.+...+..|+....|..++..++++++..+
T Consensus 353 ~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 353 ALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 98888888889888888888888777666544
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=3.1e-24 Score=221.33 Aligned_cols=379 Identities=16% Similarity=0.141 Sum_probs=219.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.++..+.+.++..++.++.|+++||+|||+.++.+.++..++.++.++++|++.+.++|+++|++.++..+.
T Consensus 49 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 128 (496)
T PRK03893 49 EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGS 128 (496)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~ 178 (483)
...++.|..|+++|++..+.......+|..+++.++. ..+||..++++....+..+.....+||++++...+++.+
T Consensus 129 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 208 (496)
T PRK03893 129 SATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA 208 (496)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccc
Confidence 9999999999999999888877777777655554332 347998877654444444444556799877643322221
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHH---HHH-----HHHHHHHHhhhhHHH-
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPL---LIS-----IGLMFFQQMSGINAV- 249 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~- 249 (483)
+.++..+.....+.............. .....+........ ... .......+.......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (496)
T PRK03893 209 PVRTMVDILYRGEHRIINILLTLAAAA------------ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPT 276 (496)
T ss_pred cchhHHHHHhcchhHHHHHHHHHHHHH------------HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence 111111111110000000000000000 00000000000000 000 000000000000000
Q ss_pred HHhhhh-ccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHH
Q psy6142 250 LASLTV-SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKIL 327 (483)
Q Consensus 250 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~ 327 (483)
...+.. ....+..+. .....+|.+.+ ...+ +..+..+......++.+++.++.+++.||+|||+.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~lp~~l~----------~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 343 (496)
T PRK03893 277 GVMLMVVVLFAFLYSW---PIQALLPTYLK----------TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA 343 (496)
T ss_pred HHHHHHHHHHHHhccc---hHHHHHHHHHH----------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 000000 000000000 00011222211 0111 11233455667788889999999999999999998
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHH
Q psy6142 328 LYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWT 407 (483)
Q Consensus 328 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~ 407 (483)
+..+..+..+....+ .. .. . . .............+.+.+.......++.|.+|++.|+++.++...++.+
T Consensus 344 ~~~~~~~~~~~~~~~--~~--~~-~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 413 (496)
T PRK03893 344 YVCSLLISQLLIIPV--FA--IG-G----A-NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL 413 (496)
T ss_pred HHHHHHHHHHHHHHH--hh--cc-c----c-HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH
Confidence 776644333222111 11 11 0 0 1111111111112233343344456778999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHhCcchhHHHHHHHH
Q psy6142 408 CTFIVTKTFNDLTALLGTHGAFWLFGVVC 436 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~g~~~~f~i~~~~~ 436 (483)
+..+++.+.+.+.+..|+..+++..+.++
T Consensus 414 g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 414 GGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 88888888888888778777776554443
No 27
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=1.8e-24 Score=221.12 Aligned_cols=359 Identities=12% Similarity=0.112 Sum_probs=210.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh-----hccHHHHHHHHHHhhhcc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL-----ANGVPMILAGRCVAGFCV 96 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~-----a~~~~~l~~~R~l~G~~~ 96 (483)
+|++.+..+.+++.+++.++..++.++.|+++||+|||+++..++++..++.++.++ ++|++.++++|+++|++.
T Consensus 57 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 136 (467)
T PRK09556 57 STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQ 136 (467)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 456688999999999999999999999999999999999998888777766665554 689999999999999999
Q ss_pred cccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh-----h--hhHHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 97 GIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF-----L--NWYQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 97 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~-----~--~w~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
|...+....++.|++|+++||+..++.+....+|..++..+... . +|+..+.+...+.++. ++.+++.+|+|
T Consensus 137 ~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p 216 (467)
T PRK09556 137 STGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSP 216 (467)
T ss_pred hccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99889999999999999999999888877777776555443321 1 3666665544444333 33445567776
Q ss_pred hhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhh-chhhH-HHHHHHHHHHHHhhhh
Q psy6142 169 RWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKA-MYMRP-LLISIGLMFFQQMSGI 246 (483)
Q Consensus 169 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 246 (483)
+....+. .++ .. ... ...+ ++. .+++ ..+..+.+++ ..+++ ........++......
T Consensus 217 ~~~~~~~-~~~---~~---~~~---~~~~--------~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 275 (467)
T PRK09556 217 EELGWGK-AEE---IF---GEP---ISEE--------DKE-TEST--DMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRI 275 (467)
T ss_pred hhcCCCC-hhh---cc---cCc---cchh--------hhc-cccc--cCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 5321111 111 00 000 0000 000 0000 0011121111 11111 1111111111111100
Q ss_pred HHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccch
Q psy6142 247 NAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRK 325 (483)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr 325 (483)
.... .+|.+.+ +..+.+ .+..+......++.+++.++++++.||+|||
T Consensus 276 -~~~~--------------------~~p~yl~----------~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r 324 (467)
T PRK09556 276 -GIDN--------------------WSPVYAF----------QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR 324 (467)
T ss_pred -HHHH--------------------HHHHHHH----------HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 0000 0111110 111111 1234455666778899999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc-cccchhhhhhcccCCccchhhhhHHHHHH
Q psy6142 326 ILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI-GFGSIPWLMMGEILPAKIRGSAASLATAF 404 (483)
Q Consensus 326 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~ 404 (483)
+...............+ .. .... ..+.. ...++..++.. +..........|.+|++.|+++.|+.+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~--~~-~~~~------~~~~~--~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~ 393 (467)
T PRK09556 325 RALVACIALALIIFTLG--VY-QHAT------SEYMY--LASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTF 393 (467)
T ss_pred chHHHHHHHHHHHHHHH--HH-HhcC------cHHHH--HHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 87655433222211111 11 1110 11111 12222333221 21112234566999999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHH------------HhCcchhHHHHHHHHHHHHHHh
Q psy6142 405 NWT-CTFIVTKTFNDLTA------------LLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 405 ~~~-~~~~~~~~~~~~~~------------~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
+.+ +..+.+..++.+.+ ..+|+..|++.+++++++.+..
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 886 55778888877777 4568888888877777765544
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=2.3e-24 Score=213.64 Aligned_cols=337 Identities=14% Similarity=0.086 Sum_probs=216.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|++.+..+.++..+++.++..++.++.|+++||+|||+++..+.++..++.++.++++|++.++++|+++|++.|...+.
T Consensus 32 ~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 111 (377)
T TIGR00890 32 YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGI 111 (377)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHH-HHHhhhh---hhhHHHHHHhhHHHHHHHHH-HhcCcCChhhhhhcCCH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILT-CFIAGTF---LNWYQLAFFGACIPVPFLIC-MFLIPETPRWYIGRNKQ 177 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~-~~~~g~~---~~w~~~~~~~~~~~~~~~~~-~~~~pESp~~l~~~~~~ 177 (483)
...++.|+.| ++|++..+.......+|..+ +++.+.. .+||..+.+.....+...+. .++++|.|+.- .+.+
T Consensus 112 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 188 (377)
T TIGR00890 112 ALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL-IKTN- 188 (377)
T ss_pred HHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc-cccC-
Confidence 8888889887 56999888888877777543 3443333 36888887766555444333 34455543210 0000
Q ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcc
Q psy6142 178 KQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSL 257 (483)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (483)
. +.+ +.....++.++++............ ..... ....
T Consensus 189 ------------~--~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~------ 226 (377)
T TIGR00890 189 ------------I--EVS------------------VKDYTVWEMLRTPQFWVLYLSFFLN---AVSGL-LLIG------ 226 (377)
T ss_pred ------------c--ccc------------------hhhhhHHHHHcCccHHHHHHHHHHH---hHHHH-HHHH------
Confidence 0 000 0000112333332222111111111 10000 0000
Q ss_pred ccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHH
Q psy6142 258 GSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMI 336 (483)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~ 336 (483)
+ ++.+ .++.+.+ .+........+++.+++.++.+++.||+|||+.+..+.....
T Consensus 227 ----------~----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 281 (377)
T TIGR00890 227 ----------L----YKPY-----------GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISA 281 (377)
T ss_pred ----------H----HHHH-----------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 0 0000 0011111 122345566778889999999999999999998877765555
Q ss_pred HHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 337 LTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
++...+.. ... ...+.......+...+.+.. .+....+..|.+|++.|+++.++......++..+.+...
T Consensus 282 ~~~~~~~~---~~~------~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 351 (377)
T TIGR00890 282 VGMAAMLF---IPM------LNDVLFLATVALVFFTWGGT-ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIA 351 (377)
T ss_pred HHHHHHHH---ccc------chhHHHHHHHHHHHHHhccc-hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 44432211 110 01111112222222222221 133345778999999999999999998889999998888
Q ss_pred HHHHHHhCcchhHHHHHHHHHHH
Q psy6142 417 NDLTALLGTHGAFWLFGVVCLVG 439 (483)
Q Consensus 417 ~~~~~~~g~~~~f~i~~~~~~i~ 439 (483)
+.+.+..|++.+|++.+++++++
T Consensus 352 g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 352 SHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888888888777766554
No 29
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=3e-24 Score=216.39 Aligned_cols=359 Identities=16% Similarity=0.135 Sum_probs=231.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh-----hccHHHHHHHHHHhhhccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL-----ANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~-----a~~~~~l~~~R~l~G~~~g 97 (483)
+.+.+..+.+++.+.+.++.++++++.|+++||+|||+.+..+.++..++.+..++ +++++.+.+.|+++|++.+
T Consensus 46 ~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 125 (417)
T PRK10489 46 MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS 125 (417)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 34457788999999999999999999999999999999999888877776665442 5678899999999999988
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhh
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIG 173 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~ 173 (483)
...+....++.|..|+++|++..++......+|..+++.++. ..+|++.+.+.....+...+..+.+||+++.-
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 203 (417)
T PRK10489 126 LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP-- 203 (417)
T ss_pred HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--
Confidence 888888889999999999999888877777777665554443 24677777665555555555556678765321
Q ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhh
Q psy6142 174 RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASL 253 (483)
Q Consensus 174 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (483)
+.+ ++.. + +.. ...+..++++..+...+....... ..+.+.
T Consensus 204 ~~~-~~~~--------------~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 244 (417)
T PRK10489 204 QPR-EHPL--------------R---SLL--------------AGFRFLLASPVVGGIALLGGLLTM--ASAVRV----- 244 (417)
T ss_pred ccc-ccch--------------H---HHH--------------HHHHHHHcChHHHHHHHHHHHHHH--HHhHHH-----
Confidence 000 0000 0 000 001122332222222211111100 000000
Q ss_pred hhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHh
Q psy6142 254 TVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISS 332 (483)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~ 332 (483)
.+|.+.+ +..+. .....+.....+++.+++.++.+++.||.++++.+..+.
T Consensus 245 ------------------~~p~~~~----------~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~ 296 (417)
T PRK10489 245 ------------------LYPALAD----------EVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLST 296 (417)
T ss_pred ------------------hhHHHHH----------hccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHH
Confidence 0111111 00111 112345556677888999999999999987777766665
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHH
Q psy6142 333 TAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFI 411 (483)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~ 411 (483)
....+....+. ... ..+...+. .+..+++.+.. +....+..|..|++.|+++.|+.+.....+..+
T Consensus 297 ~~~~~~~~~~~----~~~-------~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 297 LGSFLAVGLFG----LMP-------MWILAVLC--LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI 363 (417)
T ss_pred HHHHHHHHHHH----ccc-------hHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH
Confidence 44433332211 110 11122222 22333433332 333467789999999999999999988899999
Q ss_pred HHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhc
Q psy6142 412 VTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLT 463 (483)
Q Consensus 412 ~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~ 463 (483)
++...+.+.+..|...++++.+++.++..++.....||+|++++||+|++-.
T Consensus 364 g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (417)
T PRK10489 364 GAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDAS 415 (417)
T ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 9999998888888888888877776666666677789999999999976643
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=3.1e-23 Score=211.09 Aligned_cols=371 Identities=14% Similarity=0.165 Sum_probs=219.0
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc----cHHHHHHHHHHhhhcccccc
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN----GVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~----~~~~l~~~R~l~G~~~g~~~ 100 (483)
+.+..+.++..+++.++..++++++|+++||+|||++++.+.++..++.++.++++ +++.+++.|+++|++.|...
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 78889999999999999999999999999999999999999999999999888864 78889999999999999888
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHH-HHHHHhh----hhhhhHHHHHHhhHHHHH-HHHHHhcCcCChhhhhhc
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGI-LTCFIAG----TFLNWYQLAFFGACIPVP-FLICMFLIPETPRWYIGR 174 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g----~~~~w~~~~~~~~~~~~~-~~~~~~~~pESp~~l~~~ 174 (483)
+.....+.|++|+++|++..++......+|. +.+++.+ ...+||..+++...+.++ .++..+++||+|+....+
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP 218 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC
Confidence 8777888999999999998888777777663 3333322 234898888775554433 345566789988652111
Q ss_pred CCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhh-----hhhhchhhHHHHHHHHHHHHHhhhhHHH
Q psy6142 175 NKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSE-----VFKAMYMRPLLISIGLMFFQQMSGINAV 249 (483)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (483)
.+ ++.++ +.+++ .+. +.+ ...+.++ .+|++......+...+..... .+...
T Consensus 219 ~~-~~~~~----------~~~~~-------~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~- 274 (452)
T PRK11273 219 PI-EEYKN----------DYPDD-------YNE--KHE--QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR-YGILD- 274 (452)
T ss_pred Ch-hhhhh----------ccccc-------ccc--ccC--CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHH-
Confidence 11 11000 00000 000 000 0011122 222222111111111111000 00000
Q ss_pred HHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcc--cchH
Q psy6142 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRL--GRKI 326 (483)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~--GRr~ 326 (483)
.+|.+.+. ..+. ..+..+......++.+++.++.+++.||+ |||.
T Consensus 275 ----------------------~~P~~l~~----------~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 275 ----------------------WSPTYLKE----------VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred ----------------------HHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 11111110 0111 11233445566778889999999999999 5554
Q ss_pred HHHHH-hHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc-cccchhhhhhcccCCccchhhhhHHHHHH
Q psy6142 327 LLYIS-STAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI-GFGSIPWLMMGEILPAKIRGSAASLATAF 404 (483)
Q Consensus 327 ~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~ 404 (483)
..... ..+..+.. +. + ..... ...+... ..++..+... +.......++.|.+|++.||++.|+.+.+
T Consensus 323 ~~~~~~~~l~~~~~--~~-~-~~~~~-----~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 391 (452)
T PRK11273 323 ATGVFFMTLVTIAT--IV-Y-WLNPA-----GNPTVDM--ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 391 (452)
T ss_pred hHHHHHHHHHHHHH--HH-H-HHhcc-----cChHHHH--HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHH
Confidence 32221 11111111 11 1 11110 0111111 1222233322 11122234567999999999999999888
Q ss_pred HHHHHHH-HHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhc
Q psy6142 405 NWTCTFI-VTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLT 463 (483)
Q Consensus 405 ~~~~~~~-~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~ 463 (483)
+.+++.+ ++...+.+.+..|++..|++.+++++++.+.... ...+++|+.||.-++.+
T Consensus 392 ~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 450 (452)
T PRK11273 392 GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV-VMIGEKRHHEELLQKRN 450 (452)
T ss_pred HHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HhccccchHHHHHhhhc
Confidence 8777665 5777788888888998998888877776555443 33444445556554443
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=4e-23 Score=207.02 Aligned_cols=339 Identities=18% Similarity=0.147 Sum_probs=210.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc--------cHHHHHHHHHHhh
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN--------GVPMILAGRCVAG 93 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~--------~~~~l~~~R~l~G 93 (483)
++++.+..+.+++.+++.++.++++++.|+++||+|||++++.+.+++.++++.++++. +++.+++.|+++|
T Consensus 44 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 123 (399)
T PRK05122 44 DQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLG 123 (399)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999999999988877665542 5668899999999
Q ss_pred hcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHHHHHhcCcCChh
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFLICMFLIPETPR 169 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~ 169 (483)
++.+...+....++.|..|+++|++..++.+....+|..+++.++ ...+|+..+.+.....++.++.....||++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (399)
T PRK05122 124 IGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP 203 (399)
T ss_pred hhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999988877777666655444333 2356887766544443333222222343221
Q ss_pred hhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHH
Q psy6142 170 WYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAV 249 (483)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (483)
.+++ + + +.++.+++......... +..... ......
T Consensus 204 ---~~~~--~--~-----------------------------------~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~ 238 (399)
T PRK05122 204 ---VKGE--R--L-----------------------------------PFRRVLGRVWPYGMGLA-LASIGF--GTIATF 238 (399)
T ss_pred ---CCcc--c--h-----------------------------------hHHHHHHHHHHHHHHHH-HHHHHH--HHHHHH
Confidence 0000 0 0 00111111110111000 000000 000000
Q ss_pred HHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHH
Q psy6142 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLY 329 (483)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~ 329 (483)
++.+. . +.+. .+........+++.+++.++.+++.||+|||+.+.
T Consensus 239 -----------------------~~~~~----------~-~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 283 (399)
T PRK05122 239 -----------------------ITLYY----------A-ARGW-DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAI 283 (399)
T ss_pred -----------------------HHHHH----------H-Hccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 00000 0 0000 01123344556778889999999999999999887
Q ss_pred HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q psy6142 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCT 409 (483)
Q Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~ 409 (483)
.+.....++...+.. .. ..+...+..++..++.+... +.......|..|++.|+++.++.+.....+.
T Consensus 284 ~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 284 VSLLVEILGLLLLWL----AP-------SPWMALIGAALTGFGFSLVF-PALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHHHHHHHHHHHH----hc-------cHHHHHHHHHHHHHhHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 665544444332221 10 11222222333333333222 2223455688999999999999988888888
Q ss_pred HHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 410 FIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 410 ~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
.+.+...+.+.+..|++..+++.+++++++.+... ++++.+++
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 394 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTW-LLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-Hhcccccc
Confidence 78777777787878888888888877777665544 44554443
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.92 E-value=3.3e-23 Score=207.01 Aligned_cols=344 Identities=20% Similarity=0.228 Sum_probs=210.8
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.+++.+++.++.+++.++.|+++||+|||+.+..+.++..++.++..++++++.++++|++.|++.+...+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 124 (398)
T TIGR00895 45 AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMP 124 (398)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchh
Confidence 35567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHH-HHHHHHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIP-VPFLICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~-~~~~~~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..++......+|..+++.++. ..+|+..+.+..... +..++...++||+|++...+ +
T Consensus 125 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (398)
T TIGR00895 125 NLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-R 203 (398)
T ss_pred hHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-C
Confidence 99999999999999999988888888877666554442 346777766654333 33344556789999887655 3
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccc-hhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTG-CSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
.+++++..++.........++ ...+++.+++.... .+..++....++.........+... .......
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 271 (398)
T TIGR00895 204 PETVRRIVNAIAPQMQAEAQS-------ALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLV-GVYFLTN---- 271 (398)
T ss_pred HHHHHHHHHHHHHhccccccc-------cccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHHHHH----
Confidence 444444333222111000000 00000000000111 1222332222332222222221111 1000000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTA 334 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~ 334 (483)
+ +|.+ ....+ +..+.........++.+++.++.+++.||+|||+...... .
T Consensus 272 ------------~----~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~ 323 (398)
T TIGR00895 272 ------------W----LPKL-----------MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLL-L 323 (398)
T ss_pred ------------H----HHHH-----------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-H
Confidence 0 0100 00111 1112345566677888999999999999999995443332 2
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTK 414 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~ 414 (483)
..+....+.. ... ..+......++..++.+.. .+..+.+..|.+|++.|+++.|+...++.++..+++.
T Consensus 324 ~~~~~~~~~~--~~~--------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 392 (398)
T TIGR00895 324 GAVFAVLVGS--TLF--------SPTLLLLLGAIAGFFVNGG-QSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPI 392 (398)
T ss_pred HHHHHHHHHH--Hhh--------CHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211111 010 1122223333333333322 2445678889999999999999999888887777765
Q ss_pred HHH
Q psy6142 415 TFN 417 (483)
Q Consensus 415 ~~~ 417 (483)
..+
T Consensus 393 ~~G 395 (398)
T TIGR00895 393 LAG 395 (398)
T ss_pred hHH
Confidence 543
No 33
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=6e-23 Score=204.70 Aligned_cols=320 Identities=20% Similarity=0.240 Sum_probs=193.5
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHH--------HHHHHHHHhhhcccccccchhhhhccc
Q psy6142 39 PLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVP--------MILAGRCVAGFCVGIASLALPVYLGET 110 (483)
Q Consensus 39 ~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~--------~l~~~R~l~G~~~g~~~~~~~~~i~E~ 110 (483)
.++..+|+++.|+++||+|||+++..+.+++.++.++++++++++ .++++|+++|++.+...+....++.|.
T Consensus 45 ~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 45 FLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred HHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc
Confidence 344457999999999999999999999999999999999999976 589999999999999999999999999
Q ss_pred CCCCccchhchHhHHHHHHHHHHHHHhhh------------hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHH
Q psy6142 111 VQPEVRGTLGLLPTFLGNIGILTCFIAGT------------FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 111 ~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------------~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~ 178 (483)
.|+++|++..+..+....+|.+++..++. ..+||..+.+.....+........+||+|++...+++.
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 203 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH- 203 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc-
Confidence 99999999998888888888776655432 24688877765555444444445567776432111000
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccc
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLG 258 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (483)
++.....++.++++. ++........+...... .....
T Consensus 204 ----------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~------- 240 (394)
T TIGR00883 204 ----------------------------------KKKRGPIRETLTKHR-KPFLLGLGLVIATTTTF-YLITT------- 240 (394)
T ss_pred ----------------------------------ccccCCHHHHHHhch-HHHHHHHHHHHHHHHHH-HHHHH-------
Confidence 000112233343322 12222222222211110 00000
Q ss_pred cccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHH
Q psy6142 259 SMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMIL 337 (483)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~ 337 (483)
+ +|.+. .+..+ +..+.........+...++.++.+++.||+|||+.+..+.....+
T Consensus 241 ---------~----~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 241 ---------Y----LPTYL----------TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred ---------H----HHHHH----------HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 0 11110 00111 111234455666788889999999999999999977654433322
Q ss_pred HHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHH-HHHHHHHHHHHH
Q psy6142 338 TLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAF-NWTCTFIVTKTF 416 (483)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~-~~~~~~~~~~~~ 416 (483)
......... ... ...+.......+...+.+.. .+....+..|.+|++.|+++.++...+ ..++..+.+...
T Consensus 298 ~~~~~~~~~-~~~------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 298 LAVPLLMAL-LDS------GSFTLFFFLVLGLALIGGMY-TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHH-hcC------CchHHHHHHHHHHHHHHHHH-hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 221111111 111 01122222222233333222 234467888999999999999986544 345666777777
Q ss_pred HHHHHHhC-cchhHHHHH
Q psy6142 417 NDLTALLG-THGAFWLFG 433 (483)
Q Consensus 417 ~~~~~~~g-~~~~f~i~~ 433 (483)
+.+.+..| ++..++...
T Consensus 370 g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHHHHHcCcchhHHHHHH
Confidence 77777766 554444333
No 34
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=2.9e-22 Score=200.25 Aligned_cols=333 Identities=15% Similarity=0.142 Sum_probs=206.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH---h-----hccHHHHHHHHHHhh
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA---L-----ANGVPMILAGRCVAG 93 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~---~-----a~~~~~l~~~R~l~G 93 (483)
+|++.+.++.+++.+++.++..+++++.|+++||+||||+++.+.+...++++... + .++++.++++|+++|
T Consensus 44 ~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 123 (392)
T PRK12382 44 HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILG 123 (392)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999999999999888777655332 2 357889999999999
Q ss_pred hcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhcCcCChh
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFLIPETPR 169 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~~pESp~ 169 (483)
++.+...+....++.|..|+++|++..+..+....+|..+++.++. ..+|+..+.......+.........||.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (392)
T PRK12382 124 FGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPA 203 (392)
T ss_pred HHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999888888899999999999999888888777777655544433 346776554433332222222222343221
Q ss_pred hhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHH
Q psy6142 170 WYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAV 249 (483)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (483)
+ ++.++ +.++..+........ ..+... +....
T Consensus 204 ------~-~~~~~-----------------------------------~~~~~~~~~~~~~~~--~~l~~~----~~~~~ 235 (392)
T PRK12382 204 ------H-AGERP-----------------------------------SLWSVVGLIWKPGLG--LALQGV----GFAVI 235 (392)
T ss_pred ------C-cccCc-----------------------------------hHHHHHHHHHHhHHH--HHHHHH----HHhHH
Confidence 0 00000 001111100001110 000000 00000
Q ss_pred HHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHH
Q psy6142 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLY 329 (483)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~ 329 (483)
.. + ++.+.+ +.+. .+........+++.+++.++.+++.||+|||+.+.
T Consensus 236 ~~----------------~----~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 283 (392)
T PRK12382 236 GT----------------F----VSLYFA-----------SKGW-AMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAI 283 (392)
T ss_pred HH----------------H----HHHHHH-----------hcCC-chhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehH
Confidence 00 0 000000 0000 01123344456677889999999999999999887
Q ss_pred HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q psy6142 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCT 409 (483)
Q Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~ 409 (483)
.+.....++...+. . .. ..+.......+...+.+... +.......|.+|++.|+++.++.+....++.
T Consensus 284 ~~~~~~~~~~~~~~--~--~~-------~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 284 VSLLVETVGLLLLW--L--AP-------TAWVALAGAALTGAGCSLIF-PALGVEVVKRVPSQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred HHHHHHHHHHHHHH--H--cc-------cHHHHHHHHHHHHHHHHhHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 76654444433221 1 11 11222222333333322211 2223456788999999999999999888898
Q ss_pred HHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhh
Q psy6142 410 FIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIF 446 (483)
Q Consensus 410 ~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~ 446 (483)
.+++...+.+.+..|++..|++.+++.+++.++...+
T Consensus 352 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 352 GVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 8999888888888899999998888877776655433
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=1.8e-23 Score=207.33 Aligned_cols=346 Identities=14% Similarity=0.163 Sum_probs=206.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.+++.+++.++..++.++.|+++||+|||+.++.+.++..++.++.+++++++.++++|+++|++.+...+.
T Consensus 24 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 103 (379)
T TIGR00881 24 EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPP 103 (379)
T ss_pred HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHH-Hhh----hhhhhHHHHHHhhHHHHH-HHHHHhcCcCChhhhhhcCC
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCF-IAG----TFLNWYQLAFFGACIPVP-FLICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~-~~g----~~~~w~~~~~~~~~~~~~-~~~~~~~~pESp~~l~~~~~ 176 (483)
...++.|..|+++|++..++.+....+|..+++ ..+ ...+||..+++...+.++ .++..++.||+|+....+.+
T Consensus 104 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (379)
T TIGR00881 104 CGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPA 183 (379)
T ss_pred hHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCcc
Confidence 999999999999999988877777777665554 222 335788877665554433 34445667887643111100
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
+++ .+ + + .++.++++++..++.....++.++++......+......... .+....
T Consensus 184 ~~~----------~~-~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------- 238 (379)
T TIGR00881 184 EEM----------PN-E---E---PDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVR-TGILDW------- 238 (379)
T ss_pred ccC----------cc-c---c---cccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHH-HHHHHH-------
Confidence 000 00 0 0 000000000000001111223333322222211111111000 000000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcccc-hHHHHHHhHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRLGR-KILLYISSTA 334 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GR-r~~l~~~~~~ 334 (483)
.|.+ ..+..+. ..+..+......++.+++.++.+++.||.++ |+... ....
T Consensus 239 ----------------~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~-~~~~ 291 (379)
T TIGR00881 239 ----------------SPLY----------LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPL-AVFF 291 (379)
T ss_pred ----------------HHHH----------HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHH-HHHH
Confidence 0000 0011111 1123455666778889999999999998643 33222 1111
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHH-hccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGF-SIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
.......+.... .... ...+...+.. +..+. ..+.....+.+..|.+|++.|+++.++.+....++..+.+
T Consensus 292 ~~~~~~~~~~~~--~~~~----~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 363 (379)
T TIGR00881 292 MALIIVSLLVYW--LNPA----ANPLMDLICL--FALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAG 363 (379)
T ss_pred HHHHHHHHHHHh--cCcc----hhHHHHHHHH--HHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhh
Confidence 111111111111 1000 0111111212 22222 2222334456788999999999999999999989998888
Q ss_pred HHHHHHHHHhCcchh
Q psy6142 414 KTFNDLTALLGTHGA 428 (483)
Q Consensus 414 ~~~~~~~~~~g~~~~ 428 (483)
...+.+.+..|++++
T Consensus 364 ~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 364 LPLGYLADGFGWAGA 378 (379)
T ss_pred hhHHHHHHhhccccc
Confidence 888888887776654
No 36
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=1.8e-22 Score=204.75 Aligned_cols=368 Identities=15% Similarity=0.160 Sum_probs=218.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh----ccHHHHHHHHHHhhhcccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA----NGVPMILAGRCVAGFCVGI 98 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a----~~~~~l~~~R~l~G~~~g~ 98 (483)
|.+.+..+.++..+++.++..++.++.|+++||+|||+.+..+.++..++.++.+++ ++++.+.+.|++.|++.|.
T Consensus 55 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~ 134 (438)
T TIGR00712 55 EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGM 134 (438)
T ss_pred HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhc
Confidence 347888999999999999999999999999999999999999999999998887765 4677888999999999999
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHHHHHH-HHhhh----hhhhHHHHHHhhHHHHH-HHHHHhcCcCChhhhh
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTC-FIAGT----FLNWYQLAFFGACIPVP-FLICMFLIPETPRWYI 172 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~-~~~g~----~~~w~~~~~~~~~~~~~-~~~~~~~~pESp~~l~ 172 (483)
..+....++.|.+|+++||+..++......+|..++ .+.+. ..+||..+++...+.++ .++..+++||.|+...
T Consensus 135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~ 214 (438)
T TIGR00712 135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCG 214 (438)
T ss_pred chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcC
Confidence 888888999999999999999888877776664433 33322 34799888776665544 3445566799876421
Q ss_pred hcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccc-hhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH
Q psy6142 173 GRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTG-CSEVFKAMYMRPLLISIGLMFFQQMSGINAVLA 251 (483)
Q Consensus 173 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (483)
.+. .++. +++..+ +. ++.++.+.+.... .+..+|++....... ...+... .......
T Consensus 215 ~~~-~~~~-------~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~ 272 (438)
T TIGR00712 215 LPP-IEEY-------RNDYPD---DY-------NEKAEQELTAKEIFMQYVLPNKLLWYIAI---ANVFVYL-LRYGVLD 272 (438)
T ss_pred CCC-chhc-------cccccc---cc-------ccccccccchHHHHHHHHccCchHHHHHH---HHHHHHH-HHHHHHH
Confidence 110 0000 000000 00 0000000000000 011222222221111 1111110 0000000
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI 330 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~ 330 (483)
.+|.+.+ +..+ +..+..+...+.++..+++.++++++.||+|+++....
T Consensus 273 --------------------~~p~~l~----------~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 322 (438)
T TIGR00712 273 --------------------WSPTYLK----------EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGAT 322 (438)
T ss_pred --------------------hHHHHHH----------HccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHH
Confidence 0111111 0011 11223455667778899999999999999965432222
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchh--hhhhcccCCccchhhhhHHHHHHHHHH
Q psy6142 331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIP--WLMMGEILPAKIRGSAASLATAFNWTC 408 (483)
Q Consensus 331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~--~~~~~Ei~P~~~R~~~~s~~~~~~~~~ 408 (483)
+..........+... ..... ...+... ..++.+++... ++.. .....|.+|++.|+++.|+.+..+..+
T Consensus 323 ~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~--~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 393 (438)
T TIGR00712 323 GVFFMTLVTIAVIVY-WMNPA-----GNPLVDM--ICMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 393 (438)
T ss_pred HHHHHHHHHHHHHHH-HhcCC-----CchHHHH--HHHHHHHHHHc-cHHHHHHHHHHHhcChhheeeehhhhchHHHhh
Confidence 322221111111111 11110 0111111 12223333221 2222 235679999999999999998887776
Q ss_pred H-HHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 409 T-FIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 409 ~-~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
+ .+++...+.+.+..|+..++++.++..+++.+..+...||-|
T Consensus 394 g~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 394 GSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5 567788888888778888888877777777777777778765
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=1.2e-21 Score=195.08 Aligned_cols=333 Identities=16% Similarity=0.141 Sum_probs=202.8
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+++.+|..+++++.|+++||+|||+++..+.++..++.+++++++|++.+++.|+++|++.|...+
T Consensus 31 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~ 110 (382)
T PRK10091 31 HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFG 110 (382)
T ss_pred HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHH
Confidence 35667888999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..+.......+|..+++.++ ...+||..+.+...+.++.. ...+++||.++ +.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~ 186 (382)
T PRK10091 111 VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAK 186 (382)
T ss_pred HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----ccc
Confidence 8888999999999999887777666666655443332 34579988887666554333 33456788642 000
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
++.++ . .+.++++.. ........+.. .+......
T Consensus 187 -~~~~~--------------~----------------------~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~----- 220 (382)
T PRK10091 187 -GGLRE--------------Q----------------------FHFLRSPAP---WLIFAATMFGN-AGVFAWFS----- 220 (382)
T ss_pred -cCHHH--------------H----------------------HHHhcChHH---HHHHHHHHHHH-HHHHHHHH-----
Confidence 00000 0 001111111 11111111100 00000000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
|. .|. ..+..+ +..+..+.....+++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 221 -----------~~---~~~-----------~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 221 -----------YI---KPY-----------MMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred -----------HH---HHH-----------HHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHH
Confidence 00 000 000011 1112345566677889999999999999999999887776554
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
.++...+... .. . .+...+..++...++.....+.......+..|.+.++.+. ......++..+++..
T Consensus 276 ~i~~~~~~~~---~~-----~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~ 343 (382)
T PRK10091 276 VLALLMLFFF---GG-----M--KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYC 343 (382)
T ss_pred HHHHHHHHHH---Hh-----h--HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHH
Confidence 4443222111 10 0 1122222222222222111122223445556666665543 344556777788877
Q ss_pred HHHHHHH-hCcchhHHHHHHHHHHHHH
Q psy6142 416 FNDLTAL-LGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 416 ~~~~~~~-~g~~~~f~i~~~~~~i~~i 441 (483)
.+.+.+. .+++.++++.++.+.+...
T Consensus 344 ~G~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 344 GGMMLTLGLAYNYVALPAALLSFAAMS 370 (382)
T ss_pred hHHHHHcccCcchHHHHHHHHHHHHHH
Confidence 7777764 5677777766655555433
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=1.6e-21 Score=195.85 Aligned_cols=328 Identities=14% Similarity=0.083 Sum_probs=194.9
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+.+.++..++.++.|+++||+|||+.++.+.++..++.++..++++++.+.+.|+++|++.+...+
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 120 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGA 120 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHH
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh----hhhhhhHHHHHHhhHHHHHHHH-HHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA----GTFLNWYQLAFFGACIPVPFLI-CMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~----g~~~~w~~~~~~~~~~~~~~~~-~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..+.......++...++.+ ....+||..+++.....++..+ ..+..||+++.. ++
T Consensus 121 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 197 (406)
T PRK15402 121 VGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GE 197 (406)
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc
Confidence 889999999999999886655554444444433333 2335788887765555443333 334578765321 00
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
.++ . .+.. ...++.++++............. .... ....
T Consensus 198 ~~~-~-----------------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~----- 236 (406)
T PRK15402 198 KLS-L-----------------KELG--------------RDYKLVLKNRRFVAGALALGLVS---LPLL-AWIA----- 236 (406)
T ss_pred ccc-H-----------------HHHH--------------HHHHHHHcCcHHHHHHHHHHHHH---HHHH-HHHH-----
Confidence 000 0 0000 01122333322222111111111 0000 0000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
..|.+. .+..+.+ .+..+......++.+++.++.+++.||+|||+.+..+.+..
T Consensus 237 ---------------~~p~~~----------~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 291 (406)
T PRK15402 237 ---------------LSPVIL----------ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPM 291 (406)
T ss_pred ---------------HhHHHH----------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 000000 0000111 11223344455677889999999999999999888776655
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
.++...+........ .. .+.......++..+.+.... ...... ...+++.|++..+..+.....+..+++..
T Consensus 292 ~~g~~~~~~~~~~~~-----~~-~~~~~~~~~~~g~g~~~~~~-~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 363 (406)
T PRK15402 292 VAGLLLAALATVISS-----HA-YLWLTAGLSLYAFGIGLANA-GLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIEL 363 (406)
T ss_pred HHHHHHHHHHHHccc-----cc-HHHHHHHHHHHHHHHHHHhh-hHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 544443332211110 01 11222233333333332221 212222 23345899999999988887777777776
Q ss_pred HHHHHHHhCcc
Q psy6142 416 FNDLTALLGTH 426 (483)
Q Consensus 416 ~~~~~~~~g~~ 426 (483)
.+.+.+..+..
T Consensus 364 ~~~l~~~~~~~ 374 (406)
T PRK15402 364 SKHAYLGGGNG 374 (406)
T ss_pred HHhcccCCchH
Confidence 66655544443
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=1.9e-21 Score=192.97 Aligned_cols=336 Identities=15% Similarity=0.137 Sum_probs=202.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHH-hhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILS-TGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~-~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
++++.+..+.+++.+++.++..+..++.|+++||+||||.++. +.+...++.++.+++++++.+++.|+++|...+...
T Consensus 26 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 105 (375)
T TIGR00899 26 EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTAN 105 (375)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhH
Confidence 4567888999999999999999999999999999999987665 556666778889999999999999999998888888
Q ss_pred cchhhhhcccCCCCccchh--chHhHHHHHHHHHHHH----HhhhhhhhHHHHHHhhHHHHHHHH-HHhcCcCChhhhhh
Q psy6142 101 LALPVYLGETVQPEVRGTL--GLLPTFLGNIGILTCF----IAGTFLNWYQLAFFGACIPVPFLI-CMFLIPETPRWYIG 173 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~--~~~~~~~~~~g~~~~~----~~g~~~~w~~~~~~~~~~~~~~~~-~~~~~pESp~~l~~ 173 (483)
+....+..|..|++.|+.. .+.......+|..+++ .+....+||..+++.....+...+ ..+++||+|++...
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPG 185 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccc
Confidence 8888888999888877643 3333333444443333 333345799888876665544433 34558987743110
Q ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhh
Q psy6142 174 RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASL 253 (483)
Q Consensus 174 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (483)
+.+ + . ..++.++++..+............. .....
T Consensus 186 ~~~--------------~----~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-- 220 (375)
T TIGR00899 186 ALT--------------R----L---------------------EVRGLLASRDTRLLFVACTLMWGCN----ILYII-- 220 (375)
T ss_pred ccC--------------c----c---------------------hhhhhhcCcchHHHHHHHHHHHHHH----HHHHh--
Confidence 000 0 0 0011222222222221111111100 00000
Q ss_pred hhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHh
Q psy6142 254 TVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISS 332 (483)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~ 332 (483)
.+|.+. .+..+.+ .+..+..........++.++.+++.||+|||+.+..+.
T Consensus 221 ------------------~~~~~~----------~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 221 ------------------NMPLLI----------IHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred ------------------hhHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH
Confidence 011110 0001111 11223333444556778889999999999999887665
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHH
Q psy6142 333 TAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIV 412 (483)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~ 412 (483)
+...+....+. . .. ..+.......+...+.+.. .+....+..|..|++ |+++.++.+....++..+.
T Consensus 273 ~~~~~~~~~~~--~--~~-------~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g 339 (375)
T TIGR00899 273 LAGVAFYTGLA--A--DN-------SLWALLMLQLLNAIFIGIL-AGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIA 339 (375)
T ss_pred HHHHHHHHHHH--H--HH-------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHH
Confidence 43332221111 1 10 1122222222223333322 234456778988875 5699999888888888888
Q ss_pred HHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 413 TKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 413 ~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
+...+.+.+..|++..|++.+++.+++.+..
T Consensus 340 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 340 GSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 8888888888888888888887777765543
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=2e-21 Score=190.35 Aligned_cols=315 Identities=24% Similarity=0.305 Sum_probs=221.3
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+.+.+..+.++..+.+.++..++.++.|+++||+|||+.+..+..+..++.++..++++++.+.++|++.|++.+...+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 107 (352)
T cd06174 28 DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPA 107 (352)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHh
Confidence 44678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~ 178 (483)
...++.|..|+|+|++..+.......+|...++.++. ..+|+..+++.....+...+...++|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 174 (352)
T cd06174 108 AAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------------- 174 (352)
T ss_pred HHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999999988888888887666554443 23577777665555544444443332
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccc
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLG 258 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (483)
++ ............ ...+....
T Consensus 175 --~~------------------------------------------------~~~~~~~~~~~~-~~~~~~~~------- 196 (352)
T cd06174 175 --RL------------------------------------------------LLLLALAFFLLS-FGYYGLLT------- 196 (352)
T ss_pred --HH------------------------------------------------HHHHHHHHHHHH-hHHHHHHH-------
Confidence 00 000000000000 00000000
Q ss_pred cccccccccccCCCcccccccCCCCCchhhhh-hCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchH-HHHHHhHHHH
Q psy6142 259 SMIVGFASAYTSPAIPSMNQMGSRVSPTEEED-AGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKI-LLYISSTAMI 336 (483)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~-~l~~~~~~~~ 336 (483)
+ .|.+ ..+. ..+..+..+.....+++..++.++.+++.||+|||+ .+..+.....
T Consensus 197 ---------~----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (352)
T cd06174 197 ---------Y----LPLY----------LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAA 253 (352)
T ss_pred ---------H----HHHH----------HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0 0000 0000 001112345677778889999999999999999999 8777766555
Q ss_pred HHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 337 LTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
++....... . ..+......++...+.+.. .+....+..|..|++.|++..++.......+..+.+...
T Consensus 254 i~~~~~~~~----~-------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 321 (352)
T cd06174 254 LGLLLLALA----P-------SLALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA 321 (352)
T ss_pred HHHHHHHHh----c-------cHHHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554433211 0 1122333333333333322 355667888999999999999999999999999998888
Q ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 417 NDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 417 ~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
+.+.+..+++..+++.+++.+++.+..
T Consensus 322 g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 322 GLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 888877888888888888887765543
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=8e-22 Score=202.75 Aligned_cols=354 Identities=16% Similarity=0.118 Sum_probs=211.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.+|+.+.+.++..++.++.|+++||+|||+.++.+.+++.++++++++++|++.+.++|+++|++.+...+
T Consensus 30 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~ 109 (485)
T TIGR00711 30 GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIP 109 (485)
T ss_pred HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..++......+|..+++.++. ..+||+.+++...+.+... +..+++||.++- .+.+
T Consensus 110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 187 (485)
T TIGR00711 110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASEN 187 (485)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCC
Confidence 99999999999999999988888887777665554443 3578888877665554333 334556775431 1111
Q ss_pred HHHHHHHH--------H-H-HhCCCcch--hHHHHHH--------HHHhhccccccccCccchhhhhhhchhhHHHHHHH
Q psy6142 177 QKQARKAL--------Q-W-LRGKDADI--SREFAEI--------EKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIG 236 (483)
Q Consensus 177 ~~~a~~~l--------~-~-~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (483)
.+.....+ . . .++.+.+. +.+.... .....++. .++......+.++++......+...
T Consensus 188 ~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (485)
T TIGR00711 188 FDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL--TDDNPLVDLRLFKYRNFTIGCVYMS 265 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH--cCCCCccCHHHHcCCChHHHHHHHH
Confidence 11111100 0 0 01111110 0000000 00000000 0001111123444333222222111
Q ss_pred HHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHH
Q psy6142 237 LMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIA 315 (483)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 315 (483)
...+... + ... .+|.+.+ +..+ +..+..+.....+++.+++.++.
T Consensus 266 ~~~~~~~-~---~~~--------------------~~p~~~~----------~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 311 (485)
T TIGR00711 266 LLGLGLY-G---SFY--------------------LLPLYLQ----------QVLGYTALQAGLHILPVGLAPMLSSPIA 311 (485)
T ss_pred HHHHHHH-H---HHH--------------------HHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111100 0 000 0111111 0011 11123456677788899999999
Q ss_pred HHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchh
Q psy6142 316 TALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRG 395 (483)
Q Consensus 316 ~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~ 395 (483)
+++.||+|||+.+..+.....++...+.. . .. +....+.......+..++.+....+. .....|..|++.|+
T Consensus 312 g~l~~r~~~~~~~~~g~~~~~~~~~~~~~--~-~~----~~~~~~~~~~~~~l~g~g~~~~~~~~-~~~~~~~~~~~~~g 383 (485)
T TIGR00711 312 GRMGDKIDPRKLVTIGLILYAVGFYWRAF--T-FT----PDTPFLAIALPQFIRGFGMGCFFMPL-TTIALSGLPPHKIA 383 (485)
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHHhc--c-CC----CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHh
Confidence 99999999999887776554444432221 0 11 11111222222223333333222222 23445778999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy6142 396 SAASLATAFNWTCTFIVTKTFNDLTA 421 (483)
Q Consensus 396 ~~~s~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
++.++.+.+..++..+++...+.+.+
T Consensus 384 ~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 384 RGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888887776665544
No 42
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.90 E-value=3.1e-21 Score=198.41 Aligned_cols=353 Identities=13% Similarity=0.050 Sum_probs=206.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+.++.+|+.+.|.++..++.+.+|+++||+|||++++.+.+++.++++++++++|++.++++|+++|++.++..+
T Consensus 34 ~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~ 113 (495)
T PRK14995 34 MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVP 113 (495)
T ss_pred HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred chhhhhcc-cCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHH-HHHHhcCcCChhhhhhcC
Q psy6142 102 ALPVYLGE-TVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPF-LICMFLIPETPRWYIGRN 175 (483)
Q Consensus 102 ~~~~~i~E-~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~-~~~~~~~pESp~~l~~~~ 175 (483)
.....+.+ +.|+++|++..++......+|..+++.++. ..+||+.+++...+.++. ++..+++||+|+.-.++-
T Consensus 114 ~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~ 193 (495)
T PRK14995 114 ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPL 193 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 77766655 557899999888888887777666655543 357999888765444333 334566788763211111
Q ss_pred CHHHHHH----------HHHHHhCCCcchhHHHH----H---HHHHhhccccccccCccchhhhhhhchhhHHHHHHHHH
Q psy6142 176 KQKQARK----------ALQWLRGKDADISREFA----E---IEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLM 238 (483)
Q Consensus 176 ~~~~a~~----------~l~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (483)
+...... .++.............. . ...-..++. ..+...-..+++|++............
T Consensus 194 d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~--~~~~p~~~~~lf~~~~~~~~~~~~~~~ 271 (495)
T PRK14995 194 NLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQL--AASRPMIDMRLFTHRIILSGVVMAMTA 271 (495)
T ss_pred ChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh--cCCCCCcCHHHhCCcccHHHHHHHHHH
Confidence 1111000 00000000000000000 0 000000000 001111113344433222211111111
Q ss_pred HHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHh
Q psy6142 239 FFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATAL 318 (483)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 318 (483)
.. ...+... .+|.+.|.. ...+..+.........++..++.++.+++
T Consensus 272 ~~-~~~~~~~-----------------------~~~~~lq~v---------~g~s~~~ag~~~~~~~~~~~~~~~~~g~l 318 (495)
T PRK14995 272 MI-TLVGFEL-----------------------LMAQELQFV---------HGLSPLEAGMFMLPVMVASGFSGPIAGIL 318 (495)
T ss_pred HH-HHHHHHH-----------------------HHHHHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 011111100 01112234566777788899999999999
Q ss_pred hhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhcccCCccchhhh
Q psy6142 319 IDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEILPAKIRGSA 397 (483)
Q Consensus 319 vdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~ 397 (483)
.||+|||+.+..+.++..++...+.. ... . +..+......+ ..|++.|.. +.......+..|++.++.+
T Consensus 319 ~~r~g~~~~~~~g~~~~~~~~~~l~~---~~~-~----~~~~~~~~~~~--l~G~g~g~~~~~~~~~~~~~~~~~~~g~~ 388 (495)
T PRK14995 319 VSRLGLRLVATGGMALSALSFYGLAM---TDF-S----TQQWQAWGLMA--LLGFSAASALLASTSAIMAAAPPEKAAAA 388 (495)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHH---hcC-C----CchHHHHHHHH--HHHHhHHHHHHHHHHHHHhcCCHHhcchH
Confidence 99999999887776555444432221 111 1 11122222233 334444432 2233455678999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q psy6142 398 ASLATAFNWTCTFIVTKTFNDL 419 (483)
Q Consensus 398 ~s~~~~~~~~~~~~~~~~~~~~ 419 (483)
.++.+....++..++....+.+
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888777777766555443
No 43
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=6.6e-22 Score=202.24 Aligned_cols=143 Identities=15% Similarity=0.195 Sum_probs=111.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+.+.++..++.++.|+++||+|||+++..+.++..++.++.+++++++.++++|+++|++.+...
T Consensus 64 ~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~- 142 (476)
T PLN00028 64 DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV- 142 (476)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-
Confidence 3566888899999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHH----HHHhhh---------hhhhHHHHHHhhHHHHHHHHHHhcCc
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILT----CFIAGT---------FLNWYQLAFFGACIPVPFLICMFLIP 165 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~----~~~~g~---------~~~w~~~~~~~~~~~~~~~~~~~~~p 165 (483)
....++.|++|+++||+..++......+|..+ .+.+.. ..+||..+++...+.++..+..++++
T Consensus 143 ~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 143 SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 45567899999999999877765444333322 222211 24799988876666554444444443
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.90 E-value=3.1e-21 Score=190.42 Aligned_cols=324 Identities=14% Similarity=0.058 Sum_probs=204.5
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc-----cHHHHHHHHHHhhhccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN-----GVPMILAGRCVAGFCVG 97 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~-----~~~~l~~~R~l~G~~~g 97 (483)
|.+.+..+.+++.+++.++.+++.+++|+++||+|||++++.+.++..++.++..+++ +++.++++|+++|++.+
T Consensus 28 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 107 (365)
T TIGR00900 28 AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQA 107 (365)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999999999999999999999888887 99999999999999999
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHHHhc--CcCChhhh
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLICMFL--IPETPRWY 171 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~~~~--~pESp~~l 171 (483)
...+...+++.|..|+++|++..+..+....+|.++++.++. ..+||..++......++..+..+. .||.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 186 (365)
T TIGR00900 108 FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS- 186 (365)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-
Confidence 999999999999999999999988888888887766655443 357888776655444333333322 3433210
Q ss_pred hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH
Q psy6142 172 IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLA 251 (483)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (483)
.+++..++ ...+.. ...++.++++..+............. .+...
T Consensus 187 ---~~~~~~~~--------------~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 231 (365)
T TIGR00900 187 ---EIQALSNA--------------VLRDTR--------------EGIKFVLKNPLLRTLLLLALLFNLVF-APAIV--- 231 (365)
T ss_pred ---cccccchh--------------HHHHHH--------------hHHHHHHcCcHHHHHHHHHHHHHHHH-HHHHH---
Confidence 00000000 000000 01123333333332222211111100 00000
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI 330 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~ 330 (483)
...|.+. .+..+ +..+........+++.+++.++.+++.||+|||+.+..
T Consensus 232 -------------------~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 282 (365)
T TIGR00900 232 -------------------ALFPYVQ----------SKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTG 282 (365)
T ss_pred -------------------HHhHHHH----------HHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 0011110 00011 11123455666778888999999999999999998877
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q psy6142 331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTF 410 (483)
Q Consensus 331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~ 410 (483)
+.....++...+... . . ..+...+..++..++.+.. .+....+..|..|++.|+++.++...+..++..
T Consensus 283 ~~~~~~~~~~~~~~~---~------~-~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 283 AIFVIGLAILVVGLT---P------P-NFPLFLVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred HHHHHHHHHHHHHhh---c------h-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 654444433322211 0 0 0122233333333333322 234456788999999999999999999888888
Q ss_pred HHHHHHHHHHHH
Q psy6142 411 IVTKTFNDLTAL 422 (483)
Q Consensus 411 ~~~~~~~~~~~~ 422 (483)
+.+...+.+.+.
T Consensus 352 ~g~~~~g~l~~~ 363 (365)
T TIGR00900 352 LGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHH
Confidence 887777666554
No 45
>PRK10504 putative transporter; Provisional
Probab=99.90 E-value=5e-21 Score=196.10 Aligned_cols=353 Identities=15% Similarity=0.103 Sum_probs=207.0
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.+|+.+.+.++..++.+++|+++||+|||++++.+.+++.++.++++++++++.+.++|+++|++.|...+
T Consensus 38 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~ 117 (471)
T PRK10504 38 QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVP 117 (471)
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHH
Confidence 45678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHHH-HHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFLI-CMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~~-~~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..+.......+|..+++.++ ...+||+.+.+......+..+ .....|+.+. .+.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r 194 (471)
T PRK10504 118 VGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRR 194 (471)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCC
Confidence 9999999999999999987777776666655544333 235788888775544433333 3344555431 1112
Q ss_pred HHHHHHHHH---------HHhCCCc-ch-hHHHHH--------H--HHHhhccccccccCccchhhhhhhchhhHHHHHH
Q psy6142 177 QKQARKALQ---------WLRGKDA-DI-SREFAE--------I--EKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISI 235 (483)
Q Consensus 177 ~~~a~~~l~---------~~~~~~~-~~-~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (483)
.+.+..... ...+.+. .. ...... . ...+++.. + ......+++|++.........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~l~~~~~~~~~l~~~ 270 (471)
T PRK10504 195 FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN--N--RALFSLKLFRTRTFSLGLAGS 270 (471)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC--C--CCccCHHHhcccchHHHHHHH
Confidence 222111100 0011100 00 000000 0 00001100 0 111112345544433332222
Q ss_pred HHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHH
Q psy6142 236 GLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLI 314 (483)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 314 (483)
++.. .. ...... ..|.+.+ ...+. ..+..+......++.+++.++
T Consensus 271 ~~~~---~~-~~~~~~--------------------~~~~~~~----------~~~g~~~~~~g~~~~~~~~~~~~~~~~ 316 (471)
T PRK10504 271 FAGR---IG-SGMLPF--------------------MTPVFLQ----------IGLGFSPFHAGLMMIPMVLGSMGMKRI 316 (471)
T ss_pred HHHH---HH-HHHHHH--------------------HHHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 11 000000 0000000 00111 112334555666777788889
Q ss_pred HHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccch
Q psy6142 315 ATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIR 394 (483)
Q Consensus 315 ~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R 394 (483)
.+++.||+|||+.+..+.....+....+.. ... ....+......++..++.+.... .......+..|++.|
T Consensus 317 ~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 387 (471)
T PRK10504 317 VVQVVNRFGYRRVLVATTLGLALVSLLFML---VAL-----LGWYYLLPFVLFLQGMVNSTRFS-SMNTLTLKDLPDNLA 387 (471)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHh---ccc-----cccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCHHhc
Confidence 999999999999988776655444332221 110 01111112222222233333332 234566688999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy6142 395 GSAASLATAFNWTCTFIVTKTFNDLTALLG 424 (483)
Q Consensus 395 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g 424 (483)
+.+.++.+....++..+++...+.+.+..|
T Consensus 388 g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 388 SSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999988887887777776666555544
No 46
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=8.7e-21 Score=188.92 Aligned_cols=147 Identities=21% Similarity=0.252 Sum_probs=123.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+++.++..++.++.|+++||+|||+.+..+.++..++.++.+++++++.+.++|+++|++.+...+
T Consensus 33 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 112 (385)
T TIGR00710 33 ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSV 112 (385)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHH-HHHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFL-ICMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~-~~~~~~pESp 168 (483)
....++.|..|+++|++..+..+....+|..+++.++. ..+||..+++.....+... ...++.||++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 113 ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999888887777777655544433 3468887776555444333 3345567764
No 47
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=8.7e-21 Score=189.46 Aligned_cols=147 Identities=18% Similarity=0.223 Sum_probs=124.6
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+++.++..++.++.|+++||+|||+.++.+.++..++.+++++++|++.++++|+++|++.|...+
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 127 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWA 127 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHH
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHH-HhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLIC-MFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~-~~~~pESp 168 (483)
....++.|.+|+|+|++..+.......+|..+++.++. ..+||..+++...+.++..+. ....||.|
T Consensus 128 ~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 128 MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999888887777777665554443 358998887766555443332 33467754
No 48
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=3.4e-21 Score=192.65 Aligned_cols=339 Identities=11% Similarity=0.091 Sum_probs=205.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.++..+.+.++..+|.++.|++.||+|||+++..+.++..++.++.+++++++.+.++|+++|++.|...+.
T Consensus 36 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~ 115 (394)
T PRK03699 36 YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSI 115 (394)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccc
Confidence 45578899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHH-HHHhh----hhhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILT-CFIAG----TFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQ 177 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~-~~~~g----~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~ 177 (483)
...++.|..|+++|+...........+|..+ +.+.+ ...+||..+.....+.++..+..++ .+.|+. .++
T Consensus 116 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~----~~~ 190 (394)
T PRK03699 116 GTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPAL----GKH 190 (394)
T ss_pred hhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccc----ccc
Confidence 9999999999999999776665555544333 22222 2357998887655544433332222 222210 000
Q ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcc
Q psy6142 178 KQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSL 257 (483)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (483)
++ +. ++ .+ .+....++........++..... ..+..
T Consensus 191 ~~---------~~---------------~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 226 (394)
T PRK03699 191 AP---------KA---------------DK---PV----------AKEKWGIGVLFLAIAALLYILAQ-LTFIS------ 226 (394)
T ss_pred Cc---------cc---------------cC---cc----------ccccCChHHHHHHHHHHHHHHHH-HHHHH------
Confidence 00 00 00 00 00001112211111111111100 00000
Q ss_pred ccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHH
Q psy6142 258 GSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMI 336 (483)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~ 336 (483)
.+|.+. .+..+. ..+.........++..++.++.+++.||+|||+.+........
T Consensus 227 --------------~~p~~l----------~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 227 --------------WVPEYA----------QKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred --------------HHHHHH----------HHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 011111 011111 1122344455567788999999999999999998876554333
Q ss_pred HHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc-ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy6142 337 LTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG-FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 337 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
+....+ . ... +. +......+ ..++..+ ..+....+..|..|. .++...+.......++..+.+..
T Consensus 283 ~~~~~~---~--~~~-----~~-~~~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~ 348 (394)
T PRK03699 283 VLMYLF---V--NTD-----DP-SHLLYAIL--GLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVV 348 (394)
T ss_pred HHHHHH---H--HcC-----Cc-hHHHHHHH--HHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHH
Confidence 322211 1 111 01 11122222 2233222 123333455676654 46677788777788888899988
Q ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHhhhhccc
Q psy6142 416 FNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPE 449 (483)
Q Consensus 416 ~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpe 449 (483)
.+.+.+..|++.+++..++++.++.+.+ ++.+.
T Consensus 349 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 381 (394)
T PRK03699 349 TSPIVAHFGLQAALLTANGLYAVVFVMC-ILLGF 381 (394)
T ss_pred HHHHHHHhCchhhhhhhHHHHHHHHHHH-HHHHH
Confidence 8888888888888888777776665443 33443
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=6.9e-21 Score=190.33 Aligned_cols=147 Identities=21% Similarity=0.270 Sum_probs=122.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+.+.++..++.++.|+++||+|||+.++.+.+++.++.++..++++++.++++|+++|++.+...+
T Consensus 31 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 110 (392)
T PRK10473 31 ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYV 110 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
....++.|..|+++|++..+.......+|..+++.++. ..+|+..+++.....++. ++..+++||++
T Consensus 111 ~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 111 VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999888777776666555554443 347888777765554433 33456678864
No 50
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=2e-21 Score=198.63 Aligned_cols=147 Identities=15% Similarity=0.103 Sum_probs=122.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh--ccHHHHHHHHHHhhhcccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA--NGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a--~~~~~l~~~R~l~G~~~g~~~ 100 (483)
|++.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++.++ .+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 677899999999999999999999999999999999999999999999998887554 668899999999999999999
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----h-hhhHHHHHHhhHHHHHHHHH-HhcCcCChh
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----F-LNWYQLAFFGACIPVPFLIC-MFLIPETPR 169 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~-~~w~~~~~~~~~~~~~~~~~-~~~~pESp~ 169 (483)
+....++.|+.|+++|++..++......+|..+++.++. . .+||..+.+..++.++..+. ..+.||+|+
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999998888877777655544332 2 37888887766665544443 345678875
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.89 E-value=2.7e-20 Score=186.63 Aligned_cols=345 Identities=14% Similarity=0.120 Sum_probs=201.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH---h-hccHHHHHHHHHHhhhccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA---L-ANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~---~-a~~~~~l~~~R~l~G~~~g 97 (483)
+|++.+..+.++..+.+.++..++.++.|+++||+|||+++..+.++..++.+++. + .++++.+.+.|+++|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 45678899999999999999999999999999999999999999999988877653 3 3578899999999999998
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHH-HHHHHhh-h---hhhhHHHHHHhhHHH-HHHHHHHhcCcCChhhh
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI-LTCFIAG-T---FLNWYQLAFFGACIP-VPFLICMFLIPETPRWY 171 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g-~---~~~w~~~~~~~~~~~-~~~~~~~~~~pESp~~l 171 (483)
...+....++.|..|+++|++..++.+....+|. +.++.++ . ..+|+...+...... +..++..++.+|.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (402)
T TIGR00897 121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT-- 198 (402)
T ss_pred HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC--
Confidence 8877778888899999999999998888877775 3444433 2 235443333222111 122223333443211
Q ss_pred hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH
Q psy6142 172 IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLA 251 (483)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (483)
+.+.++ ++ + .++.. ...+++++++....... ..+++.. +......
T Consensus 199 --~~~~~~-~~----------~----~~~~~--------------~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~ 243 (402)
T TIGR00897 199 --PQHMQT-RE----------K----FSELG--------------KAATILFTNPNVLLGGM---VRIINTI-GLFGFAV 243 (402)
T ss_pred --cccccC-Cc----------c----hhhHH--------------HHHHHHHcChhHHHHHH---HHHHHHH-HHHHHHH
Confidence 000000 00 0 00000 01122333332222111 1111111 1000000
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHH-
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLY- 329 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~- 329 (483)
.+|.+. +..+.+ .+.........++..++.+..+++.||+|||+.+.
T Consensus 244 --------------------~~p~~~-----------~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 292 (402)
T TIGR00897 244 --------------------FLPMFV-----------AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRW 292 (402)
T ss_pred --------------------HHHHHH-----------HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 011110 011111 11223344556788999999999999999988663
Q ss_pred HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q psy6142 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCT 409 (483)
Q Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~ 409 (483)
.+.+.+.++...+... ..... +..+...+..+++..+.+. ..+. .....|..| +.|+++.|+.+....++.
T Consensus 293 ~~~l~~~~~~~~l~~~--~~~~~----~~~~~~~~~~~~~G~~~~~-~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~ 363 (402)
T TIGR00897 293 FGGVGCGIFTLALYYI--PQHFG----HSFAVALIIAIALGIFLAG-YVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSA 363 (402)
T ss_pred HHHHHHHHHHHHHHHH--HHccC----CcHHHHHHHHHHHHHHHHH-HHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHH
Confidence 2222222222111111 11000 0112222223333332221 1222 234567655 689999999999998999
Q ss_pred HHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 410 FIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 410 ~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.+.+...+.+.+..|+...+++.+++.+++.+..
T Consensus 364 ~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 364 FLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 8999888888888888888888887777765544
No 52
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=1.9e-20 Score=187.00 Aligned_cols=343 Identities=13% Similarity=0.060 Sum_probs=205.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|.+.+..+.+|+.+.+.++..+..++.|+++||+|||++++++.+++.+++++++++++. .+.|+++|++.+...+
T Consensus 31 ~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~p 107 (393)
T PRK11195 31 KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSP 107 (393)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4566778889999999999999999999999999999999999999999999988887764 7899999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh-hhhhhH--HHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHH
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG-TFLNWY--QLAFFGACIPVPFLICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g-~~~~w~--~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~ 178 (483)
...+++.|+.|+++|++..+..+....+|.++++.++ ...+|. ..+.+.....+...+..+.+||+|.....++ +
T Consensus 108 a~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~--~ 185 (393)
T PRK11195 108 AKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLGARRPGQS--W 185 (393)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccC--C
Confidence 9999999999999999999988888888766555544 344443 2222222222222334467898764311100 0
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccc
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLG 258 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (483)
+..+.++ +..+ ..+.+++++..+.......+.... ........
T Consensus 186 ~~~~~~~--------------~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------- 228 (393)
T PRK11195 186 NPIALLR--------------DFFH--------------ACRVLWRDKLGRFSLAGTTLFWGA-GATLRFLV-------- 228 (393)
T ss_pred CHHHHHH--------------HHHH--------------HHHHHHhCchhHHHHHHHHHHHHH-HHHHHHHH--------
Confidence 0000000 0000 012234433333322221111100 00000000
Q ss_pred cccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHH
Q psy6142 259 SMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMIL 337 (483)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~ 337 (483)
|.+. .+..+ +..+..+.....+++.++++++.+++.||.++|+.+..+.. ...
T Consensus 229 ---------------~~~~----------~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~ 282 (393)
T PRK11195 229 ---------------LAWA----------PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGL 282 (393)
T ss_pred ---------------HHHH----------HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHH
Confidence 0000 00001 11123556677788899999999999999998887766632 221
Q ss_pred HHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccch-hhhhhcccCCccc-hhhhhHHHHHHHHHHHHHHHHH
Q psy6142 338 TLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSI-PWLMMGEILPAKI-RGSAASLATAFNWTCTFIVTKT 415 (483)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-~~~~~~Ei~P~~~-R~~~~s~~~~~~~~~~~~~~~~ 415 (483)
....+. . .. ..+...+.. +..+++.+.... ......|..|++. +|++.++.+....++..+....
T Consensus 283 ~~~~~~--~--~~-------~~~~~~~~~--~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~ 349 (393)
T PRK11195 283 VVLLMA--L--QH-------SLLPAYPLL--ILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGL 349 (393)
T ss_pred HHHHHH--H--Hh-------HHHHHHHHH--HHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHH
Confidence 111111 1 10 112222222 233343333222 2234557666655 7999999888887777777766
Q ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHhhhh
Q psy6142 416 FNDLTALLGTHGAFWLFGVVCLVGLFFVIIF 446 (483)
Q Consensus 416 ~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~ 446 (483)
...+ ...|.+..+++.+...++++.+.+.|
T Consensus 350 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 350 YSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6544 45677777776666555555554443
No 53
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=2.8e-20 Score=184.87 Aligned_cols=147 Identities=22% Similarity=0.315 Sum_probs=124.0
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.++..+++.++..++.+++|+++||+|||+.+..+..+..++.++..++++++.+.++|+++|++.+...+
T Consensus 19 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 98 (377)
T PRK11102 19 ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASV 98 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 35668889999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
....++.|..|+++|++..++......+|..+++.++. ..+|+..+++...+.++. +...+++||++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 99 VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999999999999988887777777666554433 347888777655554443 33445678764
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=5.6e-20 Score=184.74 Aligned_cols=147 Identities=18% Similarity=0.218 Sum_probs=122.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|++.+..+.++..+++.+|..++.+++|+++||+|||++++.+.+++.++++++++++|++.++++|+++|++.+...+.
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~ 124 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATV 124 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999998877777
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHHH-HhcCcCChh
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLIC-MFLIPETPR 169 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~~-~~~~pESp~ 169 (483)
...++.|..|+++|++..+.......+|..+++.++. ..+||..+++.....++..+. .+++||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 7888999999999998877666666666555554443 357998888766655544433 456798753
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.88 E-value=6.4e-20 Score=182.63 Aligned_cols=327 Identities=13% Similarity=0.066 Sum_probs=200.3
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.++.++++|++.+.++|+++|++.+...+.
T Consensus 35 ~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 114 (381)
T PRK03633 35 QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVV 114 (381)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhhhh---HHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNW---YQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQ 179 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~w---~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~ 179 (483)
....+.|..|+++|++..+.......+|..+++.++..... +...+....... ..+...+.++.|+ +.++ +
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~-~ 188 (381)
T PRK03633 115 VESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLA-AILPLLFTRILNQ----QAEN-H 188 (381)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHH-HHHHHHHhcccCC----CCCC-C
Confidence 77777888899999999888888888887776666544321 122222111111 1111111111110 0000 0
Q ss_pred HHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcccc
Q psy6142 180 ARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGS 259 (483)
Q Consensus 180 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (483)
+ ..+..+.++++..+......+.... .......
T Consensus 189 ----------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------- 221 (381)
T PRK03633 189 ----------------------------------D-STSIWPMLKLRQARLGVNGCIISGI----VLGSLYG-------- 221 (381)
T ss_pred ----------------------------------C-CCCHHHHHHhcchHHHHHHHHHHHH----HHHHHHH--------
Confidence 0 0011223333222211111111000 0000000
Q ss_pred ccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHH
Q psy6142 260 MIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILT 338 (483)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~ 338 (483)
.+|.+.+ +.+.+. +.........++.+++.+..+++.||+|||+.+..+.....++
T Consensus 222 ------------~lp~~~~-----------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 278 (381)
T PRK03633 222 ------------LMPLYLN-----------HQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILG 278 (381)
T ss_pred ------------HHHHHHH-----------HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 0111110 111111 1233444566788899999999999999999887765554443
Q ss_pred HHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Q psy6142 339 LATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFND 418 (483)
Q Consensus 339 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~ 418 (483)
...+. .. ........++..+.. +..+.......|..|++.++...+.......++..+++...+.
T Consensus 279 ~~~~~-----~~---------~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~ 343 (381)
T PRK03633 279 SIAML-----SQ---------AAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAM 343 (381)
T ss_pred HHHHh-----hh---------HHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32211 00 011112222222211 2224444556788888887777776665666788888888888
Q ss_pred HHHHhCcchhHHHHHHHHHHHH
Q psy6142 419 LTALLGTHGAFWLFGVVCLVGL 440 (483)
Q Consensus 419 ~~~~~g~~~~f~i~~~~~~i~~ 440 (483)
+.+..|+.+.|.+.+.+.++..
T Consensus 344 l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 344 LMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHhCccHHHHHHHHHHHHHH
Confidence 8888888888887777766543
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=6.9e-20 Score=184.07 Aligned_cols=331 Identities=19% Similarity=0.134 Sum_probs=201.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhccc
Q psy6142 31 ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGET 110 (483)
Q Consensus 31 ~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~ 110 (483)
.++..+++.++..++.+++|+++||+|||++++.+.++..++.++..++++++.+.+.|++.|++.+ ..+....++.|.
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 134 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQ 134 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHh
Confidence 4778888999999999999999999999999999999999999999999999999999999999755 456677788899
Q ss_pred CCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCCHHHHHHHHH
Q psy6142 111 VQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNKQKQARKALQ 185 (483)
Q Consensus 111 ~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~ 185 (483)
.|+++|++..+.......+|..+++.++. ..+|+..+++...+.++.. ...+++||.++.. ++++ ++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~--- 206 (408)
T PRK09874 135 VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV----SKKE-ML--- 206 (408)
T ss_pred cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc----cchh-hh---
Confidence 99999999888877777777655444332 3468877766555443333 3345567653210 0000 00
Q ss_pred HHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhh-hhHHHHHhhhhccccccccc
Q psy6142 186 WLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMS-GINAVLASLTVSLGSMIVGF 264 (483)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (483)
+..+. .+..+++........... ..+... ......
T Consensus 207 -----------~~~~~------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------- 242 (408)
T PRK09874 207 -----------HMREV------------------VTSLKNPKLVLSLFVTTL-IIQVATGSIAPIL-------------- 242 (408)
T ss_pred -----------HHHHH------------------HHhCcCCchHHHHHHHHH-HHHHHHHHHHHHH--------------
Confidence 00000 001111111111110000 000000 000000
Q ss_pred cccccCCCcccccccCCCCCchhhhhhCCCCc----hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHH
Q psy6142 265 ASAYTSPAIPSMNQMGSRVSPTEEEDAGSTIN----ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLA 340 (483)
Q Consensus 265 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~ 340 (483)
+.+. .+..+...+ ........+++.+++.++.+++.||+|||+.+..+.....+...
T Consensus 243 ---------~~~~----------~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 243 ---------TLYV----------RELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred ---------HHHH----------HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 0000 000000000 11223344567778888899999999999988777554443332
Q ss_pred HHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy6142 341 TLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDL 419 (483)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~ 419 (483)
.... .. ..+...+...+. +++.+.. +....+..|..|.+.|++..++...+..++..+++...+.+
T Consensus 304 ~~~~----~~-------~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l 370 (408)
T PRK09874 304 PMSF----VQ-------TPLQLGILRFLL--GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI 370 (408)
T ss_pred HHHH----hc-------cHHHHHHHHHHH--HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHH
Confidence 2111 11 012222222222 3333321 22234556778999999999999888888888888888888
Q ss_pred HHHhCcchhHHHHHHHHHHHHHHhhhh
Q psy6142 420 TALLGTHGAFWLFGVVCLVGLFFVIIF 446 (483)
Q Consensus 420 ~~~~g~~~~f~i~~~~~~i~~i~~~~~ 446 (483)
.+..|++..|++.+++.+++.+..++.
T Consensus 371 ~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 371 SANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 887888888988888877776655443
No 57
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=6.6e-21 Score=187.16 Aligned_cols=321 Identities=23% Similarity=0.303 Sum_probs=198.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++..++.++..+++|++.++++|+++|++.+...+
T Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 104 (352)
T PF07690_consen 25 EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSP 104 (352)
T ss_dssp CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccc
Confidence 45668899999999999999999999999999999999999999999999977777888888999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh----hhhHHHHHHhhHHHHHHHHH-HhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF----LNWYQLAFFGACIPVPFLIC-MFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~----~~w~~~~~~~~~~~~~~~~~-~~~~pESp~~l~~~~~ 176 (483)
....++.|..|+++|++..+..+....+|..+++.++.. .+||..+++...+.++..+. ..+++|.|+.-..+.+
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~ 184 (352)
T PF07690_consen 105 ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESP 184 (352)
T ss_dssp HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SS
T ss_pred cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccc
Confidence 999999999999999999998888888887766655543 46888877766665554442 3555554432211111
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
.++.+ + .+++.....+...+++.............+. .......
T Consensus 185 ~~~~~------------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------- 228 (352)
T PF07690_consen 185 KESES------------------K----------KPKPLKPGFKSLFKNPVLWILLIAFFLFFFV-FSGFSFF------- 228 (352)
T ss_dssp TTTT------------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHH-HHHHHHH-------
T ss_pred ccccc------------------c----------cccccccccccccccchhhhhhhhhhHHHHH-HHHhhcc-------
Confidence 11100 0 0000000123333333222122211111100 0000000
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
+|.+. .+....+ ..+........++...++.++.+++.||+|+|+.........
T Consensus 229 ----------------~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 283 (352)
T PF07690_consen 229 ----------------LPLYL---------QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLL 283 (352)
T ss_dssp ----------------HHHHC---------CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----------------cchhh---------hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 01000 0000111 112334466667778888999999999999877766554444
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
.+....+...... .......+...+ .+++.+. .+....+..|..|++.|+++.|+......++..+++
T Consensus 284 ~~~~~~~~~~~~~--------~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 284 ILGALGLLLLPFS--------SSPVWLIIALFL--IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCCSHHH--------CHHHHHHHHHHH--HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------hhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4333322211111 011122222333 3333332 344567888999999999999999988877776653
No 58
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.87 E-value=5.6e-21 Score=194.37 Aligned_cols=360 Identities=14% Similarity=0.140 Sum_probs=201.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHH-HHHHhhhcccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILA-GRCVAGFCVGIAS 100 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~-~R~l~G~~~g~~~ 100 (483)
+|++.+..+.++..+.+.++..++.++.|+++||+|||++++.+.++..++.++++++++++.+.+ .|+++|++.|...
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~ 126 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNF 126 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhh
Confidence 356688899999999999999999999999999999999999999999999999999999988865 5799999998876
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-h---hhhhhHHHHHHhhHHHHHHHHHHh-cCcCChhhhhhcC
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-G---TFLNWYQLAFFGACIPVPFLICMF-LIPETPRWYIGRN 175 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g---~~~~w~~~~~~~~~~~~~~~~~~~-~~pESp~~l~~~~ 175 (483)
+....++.|++| ++|++..++......+|...++.+ + ...+||..+++...+.+...+..+ +.|+.+.. .+.
T Consensus 127 ~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~ 203 (455)
T TIGR00892 127 QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVS 203 (455)
T ss_pred hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc--ccc
Confidence 677788889986 789998888877777665444332 2 234799888776655443333332 33322210 000
Q ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 176 KQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
+.++ .+ ...+.. ..++. ...+..++..+....+.++++........ .+...... ....
T Consensus 204 ~~~~-~~---~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~-~~~~----- 261 (455)
T TIGR00892 204 KSKS-KE---GLPPDG-STKKL--------SKKSTAEKINRFLDFSLFTHRGFLVYLSG---NVIMFLGF-FAPI----- 261 (455)
T ss_pred cccc-cc---cCCCCC-ccccc--------cccchhhhhhhhcchHHhcCchHHHHHHH---HHHHHHHc-cchH-----
Confidence 0000 00 000000 00000 00000000000000123332222111111 11000000 0000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhc--ccchHHHHHHhH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDR--LGRKILLYISST 333 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr--~GRr~~l~~~~~ 333 (483)
. .++.+. .+...+..+......+.+++.+++.++.+++.|| +++|+....+..
T Consensus 262 -----------~----~l~~~~----------~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 316 (455)
T TIGR00892 262 -----------I----FLVPYA----------KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFA 316 (455)
T ss_pred -----------H----HHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHH
Confidence 0 001110 0001111123345556678888889999999997 333433332221
Q ss_pred HHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 334 AMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
....++..+. ... .. ..+...+..++++++++.. .+..+.+..|.+|++.|+++.++.+....++..+++
T Consensus 317 ~~~~~l~~ll--~~~-~~------~~~~~~i~~~~~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp 386 (455)
T TIGR00892 317 LLFNGLTHLL--CAL-AG------DYTGLVIYCIFFGLSFGSV-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGP 386 (455)
T ss_pred HHHHHHHHHH--HHH-hc------hHHHHHHHHHHHHHHhchH-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccc
Confidence 1111111111 101 10 1122233333333333222 234456677899999999999999999889988988
Q ss_pred HHHHHHHHHh-CcchhHHHHHHHHHHHHH
Q psy6142 414 KTFNDLTALL-GTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 414 ~~~~~~~~~~-g~~~~f~i~~~~~~i~~i 441 (483)
...+.+.+.. +++..|++.+++.+++.+
T Consensus 387 ~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 387 PLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred cceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 8887776665 477788877776655543
No 59
>PRK11043 putative transporter; Provisional
Probab=99.87 E-value=1.2e-19 Score=182.04 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=116.8
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.++..+++.++..++.+++|+++||+|||+.+..+.++..++.++.+++++++.+++.|+++|++.+...+
T Consensus 34 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 113 (401)
T PRK11043 34 ADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAV 113 (401)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHH----hhhhhhhHHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI----AGTFLNWYQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~----~g~~~~w~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
....++.|..|+++|++..........+|..+++. +....+||..++......+...+..++++|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 114 IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 77888999999998877655444444444333332 22345799888776665555544555566654
No 60
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=1.5e-19 Score=204.93 Aligned_cols=349 Identities=17% Similarity=0.123 Sum_probs=202.9
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH---HhhccHHHHHHHHHHhhhcccccccch
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI---ALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~---~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
+....+++.+++.++..++++++|+++||+|||++++++.++..++.++. ..+++++.++++|+++|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 34557889999999999999999999999999999999987766555543 445789999999999999999999999
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh-h------------hHHHHHH-hhHHHHHHHHHHhcCcCChh
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL-N------------WYQLAFF-GACIPVPFLICMFLIPETPR 169 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~-~------------w~~~~~~-~~~~~~~~~~~~~~~pESp~ 169 (483)
.+++.|..|+++|+++.++.+....+|.++++.++..+ . |++.+.+ .....++.++..+.+||+|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999998888877766555432 2 2222222 22222333344556798875
Q ss_pred hhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHH
Q psy6142 170 WYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAV 249 (483)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (483)
+...+.+.++ .+ . ..+. ....+.+++++..+...+...+...... ..
T Consensus 205 ~~~~~~~~~~-~~----------~----~~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~ 251 (1146)
T PRK08633 205 AAPEVFDKKK-YL----------F----PKLL--------------WRNLKLLRSDRVLWLAIIGLSYFWFISQ----LA 251 (1146)
T ss_pred CCcccccccc-cc----------c----HHHH--------------HHHHHHHhcCcHHHHHHHHHHHHHHHHH----HH
Confidence 4221110000 00 0 0000 0011223333333322222221111000 00
Q ss_pred HHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CC-chhHHHHHHHHHHHHHHHHHHHhhhcccchHH
Q psy6142 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TI-NENYCTIIVGVVNLLSVLIATALIDRLGRKIL 327 (483)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~ 327 (483)
.. .+|.+. ....+. .. ...+.....+++.+++.++.+++.||+++|+.
T Consensus 252 ~~--------------------~~~~~~----------~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~ 301 (1146)
T PRK08633 252 QA--------------------NFPAYA----------KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL 301 (1146)
T ss_pred HH--------------------hhHHHH----------HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc
Confidence 00 001010 001111 11 23455666778889999999999999999888
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHH
Q psy6142 328 LYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWT 407 (483)
Q Consensus 328 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~ 407 (483)
+.++.+.+.++.+.+... . ..+..++..+++.++.+... +....+..|..|++.||++.|+.+.+..+
T Consensus 302 ~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~rg~~~~~~~~~~~l 369 (1146)
T PRK08633 302 VPLGALGLALSLFLLPTA----P-------SLASVLVLFFLFGFSAGLFI-VPLNALIQFRAPEKELGKVLAANNFLQNV 369 (1146)
T ss_pred hhHHHHHHHHHHHHHHHh----h-------hHHHHHHHHHHHHHHHHHhh-HHHHHHHhhcCCccchhhhhHHHHHHHHH
Confidence 776655444443332211 0 11222233333333332222 23356778999999999999999888877
Q ss_pred HHHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 408 CTFIVTKTFNDLTAL-LGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~-~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
+..+.......+... .++...+++.+.++++..++.+...|++
T Consensus 370 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (1146)
T PRK08633 370 GMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLLLPDS 413 (1146)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 665544333322221 2233345554544444444444445554
No 61
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.87 E-value=5e-19 Score=176.31 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=97.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh-----ccHHHHHHHHHHhhhccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA-----NGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a-----~~~~~l~~~R~l~G~~~g 97 (483)
|++++..|.+++.+++.++..++.+..|++.||+|.|+++..+.++..+.+++.+++ ++++.+++.|++.|++ |
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 577899999999999999999999999999999999999999999999999999987 8999999999999998 7
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHH
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI 131 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~ 131 (483)
+..+.....+++++|+++||++.++.......|.
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~ 176 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGV 176 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHH
Confidence 7888899999999999999998877754444444
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2.4e-19 Score=181.25 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=102.3
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH---HhhccHHHHHHHHHHhhhccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI---ALANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~---~~a~~~~~l~~~R~l~G~~~g~~ 99 (483)
+++.+..+.+++.+.+.+|..+++++.|++.||+|||+++..+.+++.++.+++ +++++++.++++|+++|+|.|..
T Consensus 55 ~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~ 134 (438)
T PRK10133 55 AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL 134 (438)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 556889999999999999999999999999999999999999999999999875 57899999999999999999999
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG 138 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g 138 (483)
.+....++.|..|+++|++..+..+..+.+|..+++..+
T Consensus 135 ~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 135 ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988777776666777777777766655443
No 63
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=4e-20 Score=182.96 Aligned_cols=147 Identities=22% Similarity=0.208 Sum_probs=114.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc-cHHHHHHHHHHhhhcccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN-GVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~-~~~~l~~~R~l~G~~~g~~~ 100 (483)
++++.+..+.+++.+++.++..++.++.|+++||+|||+.++.+.++..++.++.++++ +++.+.++|+++|++.+. .
T Consensus 30 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~ 108 (366)
T TIGR00886 30 DDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-F 108 (366)
T ss_pred HHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-h
Confidence 45668899999999999999999999999999999999999999999999999999999 999999999999998554 5
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----h----------hhhhHHHHHH-hhHHH-HHHHHHHhcC
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----T----------FLNWYQLAFF-GACIP-VPFLICMFLI 164 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~----------~~~w~~~~~~-~~~~~-~~~~~~~~~~ 164 (483)
.....++.|..|+++|++..++......+|..++..++ . ..+||+.+++ ...+. +..++...+.
T Consensus 109 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 188 (366)
T TIGR00886 109 ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVG 188 (366)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhc
Confidence 66788999999999999988877755544443332222 1 1268877733 23222 3334445566
Q ss_pred cCChh
Q psy6142 165 PETPR 169 (483)
Q Consensus 165 pESp~ 169 (483)
+|+|+
T Consensus 189 ~~~~~ 193 (366)
T TIGR00886 189 ADTPP 193 (366)
T ss_pred ccCCc
Confidence 77763
No 64
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.85 E-value=1.2e-18 Score=175.13 Aligned_cols=359 Identities=13% Similarity=0.069 Sum_probs=202.7
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccch-hHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGR-RTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GR-r~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+.+.+..|.+++.+++.++.+++++++|+++||+|| |+++..+.++..++..+..++++++.+.+.|++.|++.+...+
T Consensus 32 ~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 111 (418)
T TIGR00889 32 TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIA 111 (418)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHH
Confidence 567899999999999999999999999999999965 7788888888888888899999999999999999997665554
Q ss_pred chhhh----hc----ccCCCCccchhchHhHHHHHHHHHHHHHhhhhhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhh
Q psy6142 102 ALPVY----LG----ETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIG 173 (483)
Q Consensus 102 ~~~~~----i~----E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~ 173 (483)
...+. .. |......|.+..+ ..+..+|..++...+....|. .+++.....+...+..+++||+|+-
T Consensus 112 ~~~~l~~~~~~~~g~~~~~~~~~~r~~G--~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~--- 185 (418)
T TIGR00889 112 LTNSISYANLPQAGLDVVTDFPPIRVMG--TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTLPDIPVA--- 185 (418)
T ss_pred HHHHHHHHHHhhcCCCchhcCCCeeeeh--hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcCCCCCCC---
Confidence 44333 22 3232223333222 234455544444333322343 3344444444444445678987631
Q ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHH-HHHHhhhhHHHHHh
Q psy6142 174 RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLM-FFQQMSGINAVLAS 252 (483)
Q Consensus 174 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 252 (483)
+.++++ +..+. ......+..|++.........++. ...+. .....
T Consensus 186 ~~~~~~-------------~~~~~-----------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~-- 231 (418)
T TIGR00889 186 KSTAKM-------------SIKVM-----------------LGLDAFILFKNKRMAIFFFFSMLLGAPLQI--TNIFG-- 231 (418)
T ss_pred cccccc-------------CHHHH-----------------hhhhHHHHhcCCCeeeHHHHHHHHHhHHHH--HHHhH--
Confidence 111000 00000 000011223322221121111111 10000 00000
Q ss_pred hhhccccccccccccccCCCccccc-ccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q psy6142 253 LTVSLGSMIVGFASAYTSPAIPSMN-QMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYIS 331 (483)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~ 331 (483)
+.+. +.+ .++... ................+..+++.+..+++.||+|||+.+..+
T Consensus 232 ---------------------~~~~~~~g--~~~~~~-~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 232 ---------------------NGFLHEFG--RNPEFA-DSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred ---------------------HHHHHHhc--cccccc-chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 0000 000 000000 000011224445566678888899999999999999999888
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHH-HHHHHHHH
Q psy6142 332 STAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLAT-AFNWTCTF 410 (483)
Q Consensus 332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~-~~~~~~~~ 410 (483)
.+...+....... .... ....+...+..++..++.+.. .+....++.|.+|++.|+++.++.+ ....++..
T Consensus 288 ~~~~~v~~~l~~~---~~~~----~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 288 LVAWALRFGFFAY---GDPE----YFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred HHHHHHHHHHHHH---cCcc----hhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHH
Confidence 7655544332221 1100 000111222222233333222 2333467889999999999999997 44557777
Q ss_pred HHHHHHHHHHHHh------CcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 411 IVTKTFNDLTALL------GTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 411 ~~~~~~~~~~~~~------g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
+++...+.+.+.. ||+.+|++.+++.+++.+..+++.||+++.
T Consensus 360 iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 8888887777763 467788888888787777777888888653
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=7.8e-19 Score=180.01 Aligned_cols=347 Identities=13% Similarity=0.145 Sum_probs=205.5
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-----chhHH-HHHhhHHHHHHHHHHHhh---ccHHHHHHHHHHhhhc
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESL-----GRRTT-ILSTGLPFIVSFLLIALA---NGVPMILAGRCVAGFC 95 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-----GRr~~-l~~~~~l~~~~~~l~~~a---~~~~~l~~~R~l~G~~ 95 (483)
+.+..+.+.+.. .... .++.+++|+++||+ |||+. ++.+.+...++.+..++. ++++.+.+.|++.|++
T Consensus 43 g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~ 120 (491)
T PRK11010 43 NIDLKTIGFFSL-VGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFC 120 (491)
T ss_pred CCCHHHHHHHHH-HHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 455555655422 2222 26899999999999 99997 556666666777777775 4688899999999999
Q ss_pred ccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----h-hhhhHHHHHHhhHHHHHHHHHHhcCcCChhh
Q psy6142 96 VGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----T-FLNWYQLAFFGACIPVPFLICMFLIPETPRW 170 (483)
Q Consensus 96 ~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~-~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~ 170 (483)
.+...+...+++.|.+|+++|++..++.+....+|.+++...+ . ..+||..+++.+...++..+..+++||+++.
T Consensus 121 ~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~ 200 (491)
T PRK11010 121 SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDT 200 (491)
T ss_pred HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 9998899999999999999999999988888888866554332 2 3579999888666655555555567987632
Q ss_pred hhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHH
Q psy6142 171 YIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVL 250 (483)
Q Consensus 171 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (483)
- +.++..+ +. ...+.++.++++.........++...... ......
T Consensus 201 ~----~~~~~~~-------------~~-----------------~~~~l~~~~~~~~~~~~ll~~~l~~~~~~-~~~~~~ 245 (491)
T PRK11010 201 I----PVPKTLE-------------QA-----------------VVAPLRDFFGRNNAWLILLLIVLYKLGDA-FAMSLT 245 (491)
T ss_pred c----ccccchh-------------hh-----------------HHHHHHHHHcCcCHHHHHHHHHHHHHHHH-HHHHHH
Confidence 1 0000000 00 00012334433222222211111110000 000000
Q ss_pred HhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHH-HHHHHHHHHHHHHHHHhhhcccchHHH
Q psy6142 251 ASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCT-IIVGVVNLLSVLIATALIDRLGRKILL 328 (483)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~i~~~lvdr~GRr~~l 328 (483)
..| ..+..+.+ .+..... ....++.+++.++++++.||+|||+.+
T Consensus 246 ---------------~~~------------------l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l 292 (491)
T PRK11010 246 ---------------TTF------------------LIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL 292 (491)
T ss_pred ---------------HHH------------------HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 000 00011111 1122333 233467889999999999999998877
Q ss_pred HHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q psy6142 329 YISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTC 408 (483)
Q Consensus 329 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~ 408 (483)
..+.....+........ .. ... ..+......++..++.+++.+. .+.+..++.|.+.+++..++.+....++
T Consensus 293 ~i~~~l~~l~~l~~~~l-~~-~~~-----~~~~l~~~~~l~~~~~g~~~~~-~~a~~~~l~~~~~~~t~~gl~~s~~~lg 364 (491)
T PRK11010 293 MIFGILQGVSNAGYWLL-SI-TDK-----NLYSMGAAVFFENLCGGMGTAA-FVALLMTLCNKSFSATQFALLSALSAVG 364 (491)
T ss_pred HHHHHHHHHHHHHHHHH-Hh-ccc-----cHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 65544333322211111 11 110 1111122222222233333322 3466678999999999999988888788
Q ss_pred HHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 409 TFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
..+.+...+.+.+..|+...|.+.+++++++.+.. .+++++
T Consensus 365 ~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~-~~~~~~ 405 (491)
T PRK11010 365 RVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLL-LVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHHhc
Confidence 88787778888888898888888777777775544 345655
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.84 E-value=2.5e-18 Score=169.55 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=104.8
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|++.+..+.++..+++.++..++.++.|+++||+|||+++.++.++..++.++. .+++++.+++.|+++|++.+...+
T Consensus 28 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~ 106 (355)
T TIGR00896 28 SALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINV 106 (355)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhc
Confidence 4566889999999999999999999999999999999999999999988888887 789999999999999999999888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh-h---h--hhHHHHHH
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT-F---L--NWYQLAFF 149 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-~---~--~w~~~~~~ 149 (483)
..+.++.|..| ++|++..+.......+|..++..++. . . .||..+..
T Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~ 159 (355)
T TIGR00896 107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAW 159 (355)
T ss_pred cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 88888999887 57999888887777776554443322 1 1 27666544
No 67
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=5.4e-19 Score=168.00 Aligned_cols=358 Identities=20% Similarity=0.256 Sum_probs=230.1
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
...+..|.+++.|.+.+.-.++-+++|.++||.+-|..+-.++++..+..++.+++++.+.+.+.-+++|..-|.-.+.+
T Consensus 59 ~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~ 138 (448)
T COG2271 59 GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPC 138 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHH-HHHHHh--hhhh---hhHHHHHHhhHHHHHH-HHHHhcCcCChhhhhhcCC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGI-LTCFIA--GTFL---NWYQLAFFGACIPVPF-LICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~--g~~~---~w~~~~~~~~~~~~~~-~~~~~~~pESp~~l~~~~~ 176 (483)
...+..++|+++||+..++-+++-.+|. +.+.++ +.+. +||..+++..++.+++ ++.++.++++|+-.
T Consensus 139 ~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~----- 213 (448)
T COG2271 139 ARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE----- 213 (448)
T ss_pred HHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc-----
Confidence 9999999999999999888888877763 444444 4433 7999998877776544 44455678877432
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCc-cchhhhhhh-chhhHHHHHHHHHHH-HHh--hhhHHHHH
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENS-TGCSEVFKA-MYMRPLLISIGLMFF-QQM--SGINAVLA 251 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~ 251 (483)
....+++.++... +.+ +++++.+ .+.++++.+ ...++.+..+++... -.. .+++....
T Consensus 214 ---GLP~ie~~~~d~~-------e~~-------~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p 276 (448)
T COG2271 214 ---GLPPIEEYRGDPL-------EIY-------EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGP 276 (448)
T ss_pred ---CCCCHHHhhcCch-------hhh-------hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 1111111111100 000 0111111 333444432 223343333333211 111 12111111
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcc--cchHHHH
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRL--GRKILLY 329 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~--GRr~~l~ 329 (483)
.|.. +...-+..++.+.....=.+.++|+++.|++.||+ |||....
T Consensus 277 -----------------------~YL~---------e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 277 -----------------------LYLS---------EVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred -----------------------HHHH---------HhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 1110 00011222345666777788999999999999995 7787653
Q ss_pred HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc-ccchhhhhhcccCCccchhhhhHHHHHHHHH-
Q psy6142 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG-FGSIPWLMMGEILPAKIRGSAASLATAFNWT- 407 (483)
Q Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~- 407 (483)
..+. +...+.+. .+.... +++ ..+...+++.+|+-+- ...+.-....|..|.+--|++.|+...++.+
T Consensus 325 ~i~~--~~i~~~~~-~~w~~~-----~~~--~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~ 394 (448)
T COG2271 325 LIFM--LLITASLV-LYWLAP-----NGS--YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLI 394 (448)
T ss_pred HHHH--HHHHHHHH-HHHcCC-----Ccc--HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHh
Confidence 3322 22222121 122111 111 2334444455555433 2223345667999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhh
Q psy6142 408 CTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVII 445 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~ 445 (483)
|....+...+...+..||.+.|.++.+.++++.+..+.
T Consensus 395 Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 395 GAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 56666666665656679999998887777776554433
No 68
>PRK10054 putative transporter; Provisional
Probab=99.83 E-value=8.5e-19 Score=175.17 Aligned_cols=339 Identities=12% Similarity=0.095 Sum_probs=203.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+..+.++..+++.++..++.++.|+++||+|||++++++.++..++.++.+++++++.++++|++.|.+.+...+.
T Consensus 37 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 116 (395)
T PRK10054 37 QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTV 116 (395)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999888877888
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh---hhhHHHHHHhhHHHHHHH-HHHhcCcCChhhhhhcCCHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF---LNWYQLAFFGACIPVPFL-ICMFLIPETPRWYIGRNKQK 178 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~---~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l~~~~~~~ 178 (483)
...+..|..|+++|++..++......+|..+++.++.. .+|+..++......+..+ +..+++||.++ +++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~----~~~~~ 192 (395)
T PRK10054 117 LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEK----AIATE 192 (395)
T ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhcccc----ccccc
Confidence 88999999999999998777776666666555444433 367777766554443332 23344555421 00000
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccc
Q psy6142 179 QARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLG 258 (483)
Q Consensus 179 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (483)
+ ++ . ...++.++++..........+ .... ......
T Consensus 193 ~-~~--------------~-------------------~~~~~~~~~~~~~~~~~~~~l---~~~~-~~~~~~------- 227 (395)
T PRK10054 193 T-GS--------------V-------------------WSPSVLLQDKALLWFTCSGFL---ASFV-SGAFAS------- 227 (395)
T ss_pred h-hh--------------h-------------------hhhhhhccCceehHHHHHHHH---HHHH-HHHhhh-------
Confidence 0 00 0 000122332222221111111 1100 000000
Q ss_pred cccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHH
Q psy6142 259 SMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMIL 337 (483)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~ 337 (483)
+ ++.+.. ...+.+.+. ..........+...+.....+++.||.++|+.+..+.....+
T Consensus 228 ---------~----~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 228 ---------C----ISQYVM--------VVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVI 286 (395)
T ss_pred ---------h----HHHHHH--------HhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHH
Confidence 0 000000 000000000 011222333344445567778999999999988777554444
Q ss_pred HHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHH
Q psy6142 338 TLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFN 417 (483)
Q Consensus 338 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~ 417 (483)
....+.. ..+ ..+...+....+.++.+. ..+....++.+..|++.|+++.+..+ .++++..+++...+
T Consensus 287 ~~~~~~~----~~~------~~~~~~~~~~~~~~g~~~-~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 287 GLVGFIF----SGN------SLLLWGMSAAVFTVGEII-YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSG 354 (395)
T ss_pred HHHHHHH----cch------HHHHHHHHHHHHHHHHHH-HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHH
Confidence 3332211 000 012222233333333221 12333456778999999999988654 56688889999998
Q ss_pred HHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 418 DLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 418 ~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.+.+..|....|++.+.+..++.+..
T Consensus 355 ~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 355 VILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 89888888777777666655554433
No 69
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.83 E-value=3.9e-18 Score=170.58 Aligned_cols=147 Identities=17% Similarity=0.214 Sum_probs=121.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++++.+..+.++..+++.++..++.+++|+++||+|||+.++.+.++..++.++..++++++.+++.|+++|++.+...+
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 115 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGV 115 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHH
Confidence 55678899999999999999999999999999999999999999999999999999999999999999999999988878
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
....+..|..|+++|++..+....+..++..+++.++. ..+||..+++...+.+.. ++..+++||++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 116 MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 88888899999999998877777777766655444332 347888877755544333 33456678875
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.83 E-value=7.5e-18 Score=168.41 Aligned_cols=339 Identities=14% Similarity=0.123 Sum_probs=186.5
Q ss_pred CCcccccchhhHHHHHH-HHHHHHHHhhhhhhhhccchhHHHH-HhhHHHHHHHHHHHhhccHHHHHHHH-HHhhhcccc
Q psy6142 22 DDVKINYIQASWIGSLM-PLSALFGGMAGGPLIESLGRRTTIL-STGLPFIVSFLLIALANGVPMILAGR-CVAGFCVGI 98 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~-~~g~~lG~~~~G~l~D~~GRr~~l~-~~~~l~~~~~~l~~~a~~~~~l~~~R-~l~G~~~g~ 98 (483)
+|++.+..+.++..+.. ..+..++.+..|+ +||+||||.++ .+.++..++..+.+++++++.+++.+ ++.|++ +.
T Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 121 (393)
T PRK15011 44 DEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFG-ST 121 (393)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-Hh
Confidence 45667888999987654 5577777766777 99999998754 55566667778888999998876554 455554 45
Q ss_pred cccchhhhhcccCCCCccc--hhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHH-HHHhcCcCChhhh
Q psy6142 99 ASLALPVYLGETVQPEVRG--TLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFL-ICMFLIPETPRWY 171 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg--~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~-~~~~~~pESp~~l 171 (483)
..+....++.|..|++.|. ...+..+....+|.++++.++ ...+||..++..+...+... ...+++||+|+-
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~- 200 (393)
T PRK15011 122 ANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE- 200 (393)
T ss_pred hHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC-
Confidence 6677777788877766553 334555555555554444333 34589988877655544333 334567886521
Q ss_pred hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH
Q psy6142 172 IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLA 251 (483)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (483)
+++ + .+ + . + . .++. .+............. ........
T Consensus 201 --~~~--~-~~----------~-------------~----~-~--------~~~~-~~~~~~~~~~~~~~~-~~~~~~~~ 237 (393)
T PRK15011 201 --LPL--A-TG----------T-------------L----E-A--------PRRN-RRDTLLLFVICTLMW-GTNSLYII 237 (393)
T ss_pred --Ccc--c-cc----------c-------------c----c-c--------cccc-cccHHHHHHHHHHHH-HHHHHHHH
Confidence 000 0 00 0 0 0 0 0000 000010000000000 00000000
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI 330 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~ 330 (483)
.+|.+. .+..+.+ .+.........++.+++.++.+++.||+|||+.+..
T Consensus 238 --------------------~~p~~l----------~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~ 287 (393)
T PRK15011 238 --------------------NMPLFI----------INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRV 287 (393)
T ss_pred --------------------HHHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 011110 0011111 112233334456677888999999999999997766
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q psy6142 331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTF 410 (483)
Q Consensus 331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~ 410 (483)
+.......... .. ... ..+.......+..++.+...+ ....+..|.+|.+ |+++.++.+....++..
T Consensus 288 ~~~~~~~~~~~--~~-~~~--------~~~~~l~~~~l~~~~~g~~~~-~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~ 354 (393)
T PRK15011 288 AAVAGVCFYAG--ML-MAH--------SPAILLGLQLLNAIYIGILGG-IGMLYFQDLMPGQ-AGSATTLYTNTSRVGWI 354 (393)
T ss_pred HHHHHHHHHHH--HH-HHh--------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCC-cchHHHHHHHHHHHHHH
Confidence 54433322211 11 111 011222222222222222221 2235667988865 99999998887788888
Q ss_pred HHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 411 IVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 411 ~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
+++...+.+.+..|++..|++.+++++++++. +++.||+
T Consensus 355 ~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 393 (393)
T PRK15011 355 IAGSLAGIVAEIWNYHAVFWFALVMIIATLFC-LLRIKDV 393 (393)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhhcCC
Confidence 88888888888788888888777777666554 4455654
No 71
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=1.1e-17 Score=167.40 Aligned_cols=145 Identities=16% Similarity=0.193 Sum_probs=118.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
++.+.+..+.++..+.+.++..+..++.|+++||+|||+.+..+.++..++.++..++++++.+.++|+++|++.+...+
T Consensus 39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~ 118 (400)
T PRK11646 39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDP 118 (400)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 35567888999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh---hhhhHHHHHHhhHHHHHHH-HHHhcCcC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT---FLNWYQLAFFGACIPVPFL-ICMFLIPE 166 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~---~~~w~~~~~~~~~~~~~~~-~~~~~~pE 166 (483)
...+++.|..|+++|++..++......+|..+++.++. ..+|+..+++.....+... +..++.||
T Consensus 119 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 119 PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88899999999999999988887777777655544433 3477877776554443332 33345565
No 72
>KOG2532|consensus
Probab=99.82 E-value=7.5e-18 Score=168.99 Aligned_cols=355 Identities=17% Similarity=0.203 Sum_probs=221.9
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhcc--HHHHHHHHHHhhhcccc
Q psy6142 21 YDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG--VPMILAGRCVAGFCVGI 98 (483)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~--~~~l~~~R~l~G~~~g~ 98 (483)
..++..+..|.+++-+.+..|..++.+..|++.||||-|+++..+.++.++++++.-++.+ ++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 4567789999999999999999999999999999999999999999999999999988754 45789999999999999
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-h----hhhhhHHHHHHhhHHHHHHHHHH-hcCcCChhhhh
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-G----TFLNWYQLAFFGACIPVPFLICM-FLIPETPRWYI 172 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g----~~~~w~~~~~~~~~~~~~~~~~~-~~~pESp~~l~ 172 (483)
..++...+...++|+++|++..++...+..+|.++...+ | ..++|+..+++.....++..+++ ++..|+|.-
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence 999999999999999999999888887777776555432 2 23689999998777775554444 455677743
Q ss_pred hcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHh
Q psy6142 173 GRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLAS 252 (483)
Q Consensus 173 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (483)
+... .++|.+.+++...++.. +++...+++++++.+... .+++..+....+...+..
T Consensus 223 -h~~i----------------s~~El~~I~~~k~~~~~-~~~~~vP~~~i~ts~~vw----ai~~~~f~~~~~~~~l~~- 279 (466)
T KOG2532|consen 223 -HPNI----------------SEKELKYIEKGKSEAHV-KKKPPVPYKAILTSPPVW----AIWISAFGGNWGFYLLLT- 279 (466)
T ss_pred -CCCC----------------CHHHHHHHHhccccccc-CCCCCCCHHHHHcCHHHH----HHHHHHHHHHHHHHHHHH-
Confidence 1111 11222223222221111 111234556666543222 222222111111111111
Q ss_pred hhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHHHHHHHHHHHHHHhhhcccch------
Q psy6142 253 LTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVGVVNLLSVLIATALIDRLGRK------ 325 (483)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr------ 325 (483)
.+|.|. .+..+.+. +..+.+.+-.+.+++..++++.+.||.-+|
T Consensus 280 -------------------y~PtY~----------~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~ 330 (466)
T KOG2532|consen 280 -------------------YLPTYL----------KEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETT 330 (466)
T ss_pred -------------------HhhHHH----------HHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHh
Confidence 123221 12222222 345667777888999999999999988552
Q ss_pred --HHH-HHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccC-CccchhhhhHHH
Q psy6142 326 --ILL-YISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEIL-PAKIRGSAASLA 401 (483)
Q Consensus 326 --~~l-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~-P~~~R~~~~s~~ 401 (483)
+.+ .++.....+++..+ .+... .+.+..++.+. +..+.......-.+.+-.. .++.-+..++++
T Consensus 331 ~rkifn~i~~~~~ai~l~~l---~~~~~------~~~~~a~~~l~---~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~ 398 (466)
T KOG2532|consen 331 VRKIFNTIAFGGPAVFLLVL---AFTSD------EHRLLAVILLT---IAIGLSGFNISGFYKNHQDIAPQHAGFVMGII 398 (466)
T ss_pred HHHHHHhHHHHHHHHHHHee---eecCC------CcchHHHHHHH---HHHHHcccchhhhHhhhhhccchHHHHHHHHH
Confidence 221 22222112112111 11111 11122222222 2111111122223444344 788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HhCcchhHHHHHHHHHHHHH
Q psy6142 402 TAFNWTCTFIVTKTFNDLTA---LLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~---~~g~~~~f~i~~~~~~i~~i 441 (483)
+..+.+.+++.+.+.+.+.. ...|+.+|++.+++.+++.+
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i 441 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNI 441 (466)
T ss_pred HHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhch
Confidence 99998888888877765552 33578899988888877654
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=1.6e-17 Score=166.50 Aligned_cols=115 Identities=12% Similarity=0.096 Sum_probs=102.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh---hccHHHHHHHHHHhhhccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL---ANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~---a~~~~~l~~~R~l~G~~~g~~ 99 (483)
+++.+..+.+++.+.+.+|.+++++..|++.||+|||+++..+.+++.++.++... .++++.+++.|++.|+|.|..
T Consensus 32 ~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~ 111 (410)
T TIGR00885 32 AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFL 111 (410)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHH
Confidence 34478899999999999999999999999999999999999999999999988644 468999999999999999999
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA 137 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~ 137 (483)
.+....++.|..|+++|++..+..+....+|..+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 112 ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887777777776655444
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.82 E-value=9.1e-18 Score=169.39 Aligned_cols=351 Identities=13% Similarity=0.114 Sum_probs=177.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH---Hhhcc-----HHHHHHHHHHhhh
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI---ALANG-----VPMILAGRCVAGF 94 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~---~~a~~-----~~~l~~~R~l~G~ 94 (483)
|++.+..+.++..+++.++..++++++|+++||+|||++++++..+..++.... ..++. +....+++++.|.
T Consensus 40 ~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (420)
T PRK09528 40 INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF 119 (420)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 467889999999999999999999999999999999999988776655443321 11111 1122334455554
Q ss_pred cccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhh--hhhHHHHHHhhHHHHHHHHHHhcC-cCChhh
Q psy6142 95 CVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTF--LNWYQLAFFGACIPVPFLICMFLI-PETPRW 170 (483)
Q Consensus 95 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~--~~w~~~~~~~~~~~~~~~~~~~~~-pESp~~ 170 (483)
+.....+....+..+. ++++|+..+.......+|..+++.+ +.. .+|+..++......++.++..+++ ||.|+-
T Consensus 120 ~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
T PRK09528 120 GFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPST 197 (420)
T ss_pred hhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccch
Confidence 4444333343443332 2334444333333333333322222 222 368877776555554444444433 332210
Q ss_pred hhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHH
Q psy6142 171 YIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVL 250 (483)
Q Consensus 171 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (483)
. ++.++.++ + .++.......+.+|++............... ........
T Consensus 198 ~---~~~~~~~~--------~-------------------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~-~~~~~~~~ 246 (420)
T PRK09528 198 A---KVANALGA--------N-------------------ASAVSLKDALALLKLPKFWFLVLYVIGVACF-YDVFDQQF 246 (420)
T ss_pred h---hhccchhc--------c-------------------cccccHHHHHHHccCCCeEeehHHHHHHHHH-HHHHHHHH
Confidence 0 00000000 0 0000000112233333222222111111000 00000000
Q ss_pred HhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHH
Q psy6142 251 ASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLY 329 (483)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~ 329 (483)
. .|.. +...+.+.+ ....+......++..++.++.+++.||+|||+.+.
T Consensus 247 ~---------------~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 296 (420)
T PRK09528 247 P---------------NFFA---------------SFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALL 296 (420)
T ss_pred H---------------HHHH---------------HHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhH
Confidence 0 0000 000000011 11234444556777899999999999999999887
Q ss_pred HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHH-HHHHHHHH
Q psy6142 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASL-ATAFNWTC 408 (483)
Q Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~-~~~~~~~~ 408 (483)
.+.++..+.....+. .. ..+.......+...+.+... .....+..|.+|++.|++..+. .+....++
T Consensus 297 ~~~~l~~~~~~l~~~----~~-------~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg 364 (420)
T PRK09528 297 LAGTIMAVRIIGSGF----AT-------GPLEVSILKLLHAFEVPFLL-VGVFKYITLNFDVRLSATIYLVGFQFAKQLG 364 (420)
T ss_pred HHHHHHHHHHHHHHh----cc-------cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCccceeeeeeehHHHHHHHH
Confidence 766554443332221 11 11222222222222222111 2223567788999999988765 34455677
Q ss_pred HHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcc
Q psy6142 409 TFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVP 448 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lp 448 (483)
..+.+...+.+.+..|++.+|++.+++.++..++.+..++
T Consensus 365 ~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 365 AVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 7788888888888889998998888777666555544444
No 75
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.82 E-value=2.8e-17 Score=167.15 Aligned_cols=144 Identities=19% Similarity=0.208 Sum_probs=110.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
.|++. .++..|+.+.+.++..++.++.|.++|.||||..++.+.++..+|+++++-++|..+++.+-.+.|+|.|....
T Consensus 72 ~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~ 150 (599)
T PF06609_consen 72 ADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL 150 (599)
T ss_pred HhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH
Confidence 34443 36778999999999999999999999999999999999999999999999999999999999999999877764
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHH----HHHHHHhhhhhhhHHHHHHhhHHHHHHHH--HHhcCcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIG----ILTCFIAGTFLNWYQLAFFGACIPVPFLI--CMFLIPET 167 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g----~~~~~~~g~~~~w~~~~~~~~~~~~~~~~--~~~~~pES 167 (483)
....++|..|.|+|+....+........ ...+..+...-+||+.+++..++..+.++ .+++.|.+
T Consensus 151 -~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 151 -AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred -HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5566899999999987655444433322 22222222234799998887776544332 33455644
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=1.1e-17 Score=159.50 Aligned_cols=346 Identities=18% Similarity=0.174 Sum_probs=214.5
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHH---HHHHHHHHhhhcccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVP---MILAGRCVAGFCVGI 98 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~---~l~~~R~l~G~~~g~ 98 (483)
+|++.|+.|.+++.++..+...+..+..|.+.||||-|+...++.++..+-.+..+++.+++ .+++++++.|++ |+
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-Ga 120 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GA 120 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cc
Confidence 67779999999999999999999999999999999999999999999999999999997666 999999999998 55
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHHHHHH----HHhhhhhh---hHHHHHHhhHHHHH-HHHHHhcCcCChhh
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTC----FIAGTFLN---WYQLAFFGACIPVP-FLICMFLIPETPRW 170 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~----~~~g~~~~---w~~~~~~~~~~~~~-~~~~~~~~pESp~~ 170 (483)
...+...++++++||+++|.+..+.. ..++|.... +.+....+ |+....+-....++ .+..++.+.+.|..
T Consensus 121 sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 121 SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 55678899999999999999888877 555554333 32222334 76655443333322 34445556655543
Q ss_pred hhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHH
Q psy6142 171 YIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVL 250 (483)
Q Consensus 171 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (483)
-..+++.++ ...+.+++++....+.+.....+ -.+.+...
T Consensus 200 r~~~~~~~~-------------------------------------~~~~~v~~~~~~W~lsllY~~tF-G~Fvgfs~-- 239 (417)
T COG2223 200 RASVKPQLP-------------------------------------AQLKAVFSNKDTWLLSLLYFATF-GGFVGFSA-- 239 (417)
T ss_pred hccccccch-------------------------------------hHHHHHhcCcchHHHHHHHHHHH-HHHHHHHH--
Confidence 111111110 01122232222222111111111 01111111
Q ss_pred HhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142 251 ASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI 330 (483)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~ 330 (483)
.+|.+.+.+.. .+..+.........+...+.-+++|++.||+|.++.++.
T Consensus 240 ---------------------~l~~~~~~~fg---------~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 240 ---------------------YLPMYLVTQFG---------LSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred ---------------------HHHHHHHHhcC---------CChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHH
Confidence 11222111111 112223344455556666777899999999999999988
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q psy6142 331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTF 410 (483)
Q Consensus 331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~ 410 (483)
....+.++...+.........+ ...+.....+.....+.+.|-+++. -.++-++|. .-|...|+...++.++++
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~l~l~~~~G~GnGsvf-k~Ip~if~~-~~G~v~G~vga~G~lGGf 363 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHG----GSFVVFVAVFLALFVFAGLGNGSVF-KMIPVIFPK-ETGAVTGIVGAIGGLGGF 363 (417)
T ss_pred HHHHHHHHHHHHHccccccccC----cchHHHHHHHHHHHHHhccCcchhe-eechHHHHh-hhhHHHHHHHHhcccccc
Confidence 8777777666554322111110 1112222222223344555555543 444455554 556677888888888888
Q ss_pred HHHHHHHHHHHHhC-cchhHHHHHHHHHHHHHHhhh
Q psy6142 411 IVTKTFNDLTALLG-THGAFWLFGVVCLVGLFFVII 445 (483)
Q Consensus 411 ~~~~~~~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~ 445 (483)
+.+..+....+..| +...|+++..+.+++.+..+.
T Consensus 364 ~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 364 FLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred chhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877777 677888888888777665443
No 77
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.81 E-value=1.6e-17 Score=168.51 Aligned_cols=363 Identities=17% Similarity=0.175 Sum_probs=207.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhc----cchhHH-HHHhhHHHHHHHHHHHhhcc------HHHHHHHHH
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIES----LGRRTT-ILSTGLPFIVSFLLIALANG------VPMILAGRC 90 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~----~GRr~~-l~~~~~l~~~~~~l~~~a~~------~~~l~~~R~ 90 (483)
++.+++..+.+++.++..+...+..++.|+++|| +||||. ++.+...+.++.+++.++++ ...+.+.++
T Consensus 28 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (437)
T TIGR00792 28 DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYI 107 (437)
T ss_pred HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4567899999999999999999999999999997 788665 66777888888888877765 346688899
Q ss_pred HhhhcccccccchhhhhcccC-CCCccchhchHhHHHHHHHHHHHHH-----hh------hhhhhHHHHHHhhHHHHHHH
Q psy6142 91 VAGFCVGIASLALPVYLGETV-QPEVRGTLGLLPTFLGNIGILTCFI-----AG------TFLNWYQLAFFGACIPVPFL 158 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~g~~~~~~-----~g------~~~~w~~~~~~~~~~~~~~~ 158 (483)
+.+++.+...+...++..|.. ++++|++..+..+....+|.++... .. ...+|+..+.+...+.++..
T Consensus 108 ~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 187 (437)
T TIGR00792 108 LLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL 187 (437)
T ss_pred HHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH
Confidence 999988887777778888887 5688999888777776666433322 21 12368877766555544333
Q ss_pred -HHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHH
Q psy6142 159 -ICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGL 237 (483)
Q Consensus 159 -~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (483)
+..+..||.++. .+.++ + . +.+.....+++++++..+.... .
T Consensus 188 ~~~~~~~~e~~~~----~~~~~-~--------~---------------------~~~~~~~~~~l~~~~~~~~~~~---~ 230 (437)
T TIGR00792 188 IICFFGTKERYSE----IPKNI-E--------K---------------------KLSLKQIFKALFKNDQLLILCL---A 230 (437)
T ss_pred HHHHcCCEecCCC----CCccc-c--------c---------------------CCCHHHHHHHHhCCHHHHHHHH---H
Confidence 334566775411 00000 0 0 0000001122333322222111 1
Q ss_pred HHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6142 238 MFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATA 317 (483)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 317 (483)
.++... +...... + .+.+.+. ..+......+......++.+++.++.++
T Consensus 231 ~~~~~~-~~~~~~~----------------~----~~~~~~~----------~~~~~~~~~~~~~~~~i~~ii~~~~~~~ 279 (437)
T TIGR00792 231 YLFYNL-AFNIKNG----------------V----QVYYFTY----------VLGDPELFSYMGSIAIVAGLIGVLLFPR 279 (437)
T ss_pred HHHHHH-HHHHHcc----------------h----hheeEee----------ecCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1000000 0 0000000 0000111233445557888899999999
Q ss_pred hhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCC-------
Q psy6142 318 LIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILP------- 390 (483)
Q Consensus 318 lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P------- 390 (483)
+.||+|||+.+..+.....++...+. . .. ...+...+..++..++.+.. .+..+.+.+|..|
T Consensus 280 l~~r~g~~~~~~~~~~~~~~~~~~~~--~-~~-------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 348 (437)
T TIGR00792 280 LVKKFGRKILFAGGILLMVLGYLIFF--F-AG-------SNLPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTG 348 (437)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHH--H-cc-------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcC
Confidence 99999999998887655554433221 1 11 01122222222222333222 2455667777655
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcc--------------hhHHHHHHHHHHHHHHhhh-hcccCCCCCH
Q psy6142 391 AKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTH--------------GAFWLFGVVCLVGLFFVII-FVPETQGKSL 455 (483)
Q Consensus 391 ~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~--------------~~f~i~~~~~~i~~i~~~~-~lpet~~~~l 455 (483)
.+.+|...|+.+.+..++..+++...+.+.+..|+. ..+....+++.+..++... +.|.+++ +.
T Consensus 349 ~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~~~y~l~~~-~~ 427 (437)
T TIGR00792 349 VRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLLAAIIIGRFYKLTEK-KH 427 (437)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeCcHH-HH
Confidence 566788889988888888888887777776665542 2334444343333333333 5566644 45
Q ss_pred HHHHHHhcC
Q psy6142 456 EDIERNLTG 464 (483)
Q Consensus 456 ~ei~~~~~~ 464 (483)
+|++++++.
T Consensus 428 ~~i~~~l~~ 436 (437)
T TIGR00792 428 AEIVEELEQ 436 (437)
T ss_pred HHHHHHHhc
Confidence 667666653
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.81 E-value=4.2e-17 Score=163.53 Aligned_cols=145 Identities=14% Similarity=0.172 Sum_probs=113.5
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-----chhH-HHHHhhHHHHHHHHHHHhh---ccHHHHHHHHHHhh
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESL-----GRRT-TILSTGLPFIVSFLLIALA---NGVPMILAGRCVAG 93 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-----GRr~-~l~~~~~l~~~~~~l~~~a---~~~~~l~~~R~l~G 93 (483)
+.+.+.+|.+++..+... .+..+++|+++||+ |||| .++.+.++..++..+.++. .+++.+.+..++.+
T Consensus 28 ~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~ 105 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVA 105 (402)
T ss_pred HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 456788899998777665 68999999999999 8886 6888888888888877777 35777888888888
Q ss_pred hcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh-----hhhhHHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT-----FLNWYQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-----~~~w~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
+..+...+...+++.|..|+++|++..+.......+|.+++..++. ..+||..+++.....++..+..+++||++
T Consensus 106 ~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 106 FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 8888888899999999999999999998888887777665544322 34799988876665555444556678865
Q ss_pred h
Q psy6142 169 R 169 (483)
Q Consensus 169 ~ 169 (483)
+
T Consensus 186 ~ 186 (402)
T PRK11902 186 V 186 (402)
T ss_pred c
Confidence 4
No 79
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=1.4e-17 Score=164.16 Aligned_cols=145 Identities=17% Similarity=0.229 Sum_probs=109.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-----chhHHH-HHhhHHHHHHHHHHHhh---ccHHHHHHHHHHh
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESL-----GRRTTI-LSTGLPFIVSFLLIALA---NGVPMILAGRCVA 92 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-----GRr~~l-~~~~~l~~~~~~l~~~a---~~~~~l~~~R~l~ 92 (483)
+|.+.+..+.++..... +...+ .+++|+++||+ ||||.+ +.+.++..++....++. .+.+.+....++.
T Consensus 16 ~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~ 93 (356)
T TIGR00901 16 RSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLI 93 (356)
T ss_pred HHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH
Confidence 34567888888886553 33333 89999999998 999985 56777777777777777 4556677888888
Q ss_pred hhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----hhh--------hHHHHHHhhHHHHHHHHH
Q psy6142 93 GFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----FLN--------WYQLAFFGACIPVPFLIC 160 (483)
Q Consensus 93 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~--------w~~~~~~~~~~~~~~~~~ 160 (483)
|++.+...+...+++.|..|+|+|++..+..+.+..+|.+++..++. ..+ ||..+++.++..++..+.
T Consensus 94 ~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 94 AFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 98888888899999999999999999999988888888776655542 345 999888877665555444
Q ss_pred Hh-cCcCCh
Q psy6142 161 MF-LIPETP 168 (483)
Q Consensus 161 ~~-~~pESp 168 (483)
.+ ..||++
T Consensus 174 ~~~~~~e~~ 182 (356)
T TIGR00901 174 TLFLAKEPQ 182 (356)
T ss_pred HHHhccCCC
Confidence 44 457753
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.80 E-value=2.2e-17 Score=186.80 Aligned_cols=343 Identities=14% Similarity=0.090 Sum_probs=195.6
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHH---hhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhh
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILS---TGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPV 105 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~---~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~ 105 (483)
...++..+++.+..++.+++.|+++||||||+++.. ..++.....+.....++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 346777888999999999999999999999998643 22333333344445589999999999999999999999999
Q ss_pred hhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh----hhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHHHH
Q psy6142 106 YLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF----LNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQAR 181 (483)
Q Consensus 106 ~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~----~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~a~ 181 (483)
++.|..|+++|+++.++.+....+|.+++++++.. .+|+..+.......+..++..+++||.+.- .+++..+ .
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 208 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKID-R 208 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec-c
Confidence 99999999999999999999988888776665543 357766644444444445555667765421 0000000 0
Q ss_pred HHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhcccccc
Q psy6142 182 KALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMI 261 (483)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (483)
+.. .+.. ...+...+++..+...+...+..+ .. ..+..
T Consensus 209 ~~~--------------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~---------- 246 (1140)
T PRK06814 209 NII--------------RSTI--------------TLLKYAKADKRIWLAILGISWFWL---VG-AVVLS---------- 246 (1140)
T ss_pred chH--------------HHHH--------------HHHHHHhcCchHHHHHHHHHHHHH---HH-HHHHH----------
Confidence 000 0000 012223333222222222211111 00 00000
Q ss_pred ccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHH
Q psy6142 262 VGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLA 340 (483)
Q Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~ 340 (483)
.+|.+. .+..+ +.....+.....+++.+++.++.+++.|+.++++.+..+.++..++..
T Consensus 247 ----------~~p~~~----------~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 247 ----------QLPLLA----------KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred ----------HhHHHH----------HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 011110 11111 112234566777888999999999999888776655554443333322
Q ss_pred HHHHHHhhccCCCC----------ccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q psy6142 341 TLGTFFYFKSTGSD----------VSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTF 410 (483)
Q Consensus 341 ~l~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~ 410 (483)
.+... ........ .....+...+..++++++.+... +....++.+..|++.||+..|+.+.+..++..
T Consensus 307 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ 384 (1140)
T PRK06814 307 DLAFA-SSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYI-VPLFAALQAWANPAHRARVIAANNVLNAAFMV 384 (1140)
T ss_pred HHHhc-ccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhH-HHHHHHHHhhCCcccceeeeHHHHHHHHHHHH
Confidence 22211 00000000 00112333333333333322222 23356778999999999999999988888777
Q ss_pred HHHHHHHHHHH-HhCcchhHHHHHHHHHH
Q psy6142 411 IVTKTFNDLTA-LLGTHGAFWLFGVVCLV 438 (483)
Q Consensus 411 ~~~~~~~~~~~-~~g~~~~f~i~~~~~~i 438 (483)
+++.....+.. ..+....+++.++++++
T Consensus 385 ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 385 AGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 77776665543 23444444444444333
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.80 E-value=7e-17 Score=161.64 Aligned_cols=347 Identities=13% Similarity=0.139 Sum_probs=191.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH---Hhhc-----cHHHHHHHHHHhhh
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI---ALAN-----GVPMILAGRCVAGF 94 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~---~~a~-----~~~~l~~~R~l~G~ 94 (483)
+++.+..+.++..+++.++..++.+++|+++||+|||+.++.++....++.... .+++ .+..+.+.|++.|+
T Consensus 32 ~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 111 (396)
T TIGR00882 32 VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGF 111 (396)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999998776665544322 1222 23345778999999
Q ss_pred cccccccchhhhhcccCCCCc--cchhchHhHHHHHHHHHHHHHhhhhhhhHHHHHHhhHHHHHHHHHHhc-CcCChhhh
Q psy6142 95 CVGIASLALPVYLGETVQPEV--RGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFL-IPETPRWY 171 (483)
Q Consensus 95 ~~g~~~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~g~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~-~pESp~~l 171 (483)
+.+...+....+..|..+++. .|......+.+..+|..++..+.. .+|+..++....+.+...+..+. .||.|+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~- 189 (396)
T TIGR00882 112 VFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS- 189 (396)
T ss_pred HhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh-
Confidence 999888888888877654432 133333444444455444433322 48888887766666544433333 4554321
Q ss_pred hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHH
Q psy6142 172 IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLA 251 (483)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (483)
++.++.. +. +.++....+.++.+|++.........+ .... ..+....
T Consensus 190 ------~~~~~~~----~~-------------------~~~~~~~~~~~~~l~~~~~~~~~l~~~--~~~~--~~~~~~~ 236 (396)
T TIGR00882 190 ------ATVANAL----GA-------------------NASAFSLKLALELFRQRKFWMFVLYVV--GVAC--VYDVFDQ 236 (396)
T ss_pred ------hhhhccc----cc-------------------ccCCCCHHHHHHHHcCCcHHHHHHHHH--HHHH--HHHHHHH
Confidence 0000000 00 000000112344454433221111111 1100 0000000
Q ss_pred hhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142 252 SLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI 330 (483)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~ 330 (483)
.. ..|... + ....+.+ ...........+...++.+..+++.||+|||+.+..
T Consensus 237 ~~------------~~y~~~----~-----------~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~ 289 (396)
T TIGR00882 237 QF------------ANFFTS----F-----------FATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLI 289 (396)
T ss_pred HH------------HHHHHH----h-----------ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 00 000000 0 0000000 112233444566778888999999999999998877
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHH-HHHHHHHHH
Q psy6142 331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASL-ATAFNWTCT 409 (483)
Q Consensus 331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~-~~~~~~~~~ 409 (483)
+..+..+...... . .+ ..+......++...+..... .....+..|..|++.|+++.+. .+....++.
T Consensus 290 ~~~l~~l~~~~~~--~---~~------~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~ 357 (396)
T TIGR00882 290 AGTIMSVRIIGSS--F---AT------TALEVVILKMLHAFEVPFLL-VGCFKYITSQFDVRLSATIYLIGFQFAKQLAM 357 (396)
T ss_pred HHHHHHHHHHHHH--h---cC------ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcceEEEeehHHHHHHHHHHH
Confidence 7654444332211 1 11 11222222222223222111 1223356778899999887776 345566788
Q ss_pred HHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 410 FIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 410 ~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.+.+...+.+.+..|++.+|.+.+++.++..+..
T Consensus 358 ~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 358 IFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 8888888888888899888988877776655544
No 82
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.78 E-value=3.1e-16 Score=156.12 Aligned_cols=334 Identities=14% Similarity=0.086 Sum_probs=193.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhh-HHHHHHH-HHHHhhccHHHHHHHHHHhhhccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTG-LPFIVSF-LLIALANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~-~l~~~~~-~l~~~a~~~~~l~~~R~l~G~~~g~~ 99 (483)
+|.+.+..+.+++.+++.++..++.+++|+++||+|||+.....+ ....+.. ..+.++++++.+++.|.++|.+.+..
T Consensus 32 ~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 111 (382)
T TIGR00902 32 KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAG 111 (382)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccc
Confidence 356789999999999999999999999999999999855432222 1111222 34557889999999999999998888
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-h---hhhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcC
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-G---TFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRN 175 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g---~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~ 175 (483)
.+...++..|. +++|++..+......++|.++++.. + ...+||..+.......+ ..+....++|+++ +.
T Consensus 112 ~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~----~~ 184 (382)
T TIGR00902 112 MPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIP----PK 184 (382)
T ss_pred hhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCC----CC
Confidence 88888888775 4667776666666666665544433 2 33578887765443322 2222333444320 00
Q ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 176 KQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
++++.. +++.....++.+|++........ .++.+.. ......
T Consensus 185 ~~~~~~------------------------------~~~~~~~~~~~l~~~~~~~~l~~---~~l~~~~-~~~~~~---- 226 (382)
T TIGR00902 185 DAIPED------------------------------ESQGDSAFIALLKNPMNLRFLAA---VCLIQGA-HAAYYG---- 226 (382)
T ss_pred cccccc------------------------------ccccchhHHHHHcChHHHHHHHH---HHHHHHH-HHHHHH----
Confidence 000000 00000112344444322222221 1111111 000000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTA 334 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~ 334 (483)
+ .|.+ . ++.+.+ ...........++++++.++++++.||+|+|+++..+.+.
T Consensus 227 ------------~----~~~~----------l-~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~ 279 (382)
T TIGR00902 227 ------------F----SAIY----------W-QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIA 279 (382)
T ss_pred ------------H----HHHH----------H-HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHH
Confidence 0 0000 0 011111 1223344456788889999999999999999999888766
Q ss_pred HHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHH-HHHHHHHHH
Q psy6142 335 MILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAF-NWTCTFIVT 413 (483)
Q Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~-~~~~~~~~~ 413 (483)
..+........ +..+.....-.+..++++.... ....++.+. |++.|++++++.+.. ..++..+++
T Consensus 280 ~~~~~~~~~~~-----------~~~~~~~~~q~l~g~~~~~~~~-~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~ 346 (382)
T TIGR00902 280 CVGRWAIIGAI-----------EAFPLIFLLQILHCGTFAVCHL-AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFT 346 (382)
T ss_pred HHHHHHHHHhH-----------hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66555433211 0112333334444555554432 234566776 999999999987643 336666777
Q ss_pred HHHHHHHHHhCcchhHHHHHHHHHHHHH
Q psy6142 414 KTFNDLTALLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 414 ~~~~~~~~~~g~~~~f~i~~~~~~i~~i 441 (483)
...+.+.+..|. ..|++.+++.+++++
T Consensus 347 ~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 347 AFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 777888888775 567777777666543
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.77 E-value=2.1e-16 Score=161.41 Aligned_cols=131 Identities=14% Similarity=0.069 Sum_probs=106.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHhhHHHHHHHHHHHhhccHHH-HHHHHHHhhhccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIES-LGRRTTILSTGLPFIVSFLLIALANGVPM-ILAGRCVAGFCVGIA 99 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~-~GRr~~l~~~~~l~~~~~~l~~~a~~~~~-l~~~R~l~G~~~g~~ 99 (483)
++++.+..+.+|+.+.+.....+..+++|+++|| +||||+++++.+++.+++++++++++.+. +.++|+++|+|.|..
T Consensus 43 ~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~ 122 (489)
T PRK10207 43 KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLF 122 (489)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccc
Confidence 3577888889999999998888899999999999 99999999999999999999999987554 558999999999999
Q ss_pred ccchhhhhcccCCCCc--cchhchHhHHHHHHHHHHHH----HhhhhhhhHHHHHHhhH
Q psy6142 100 SLALPVYLGETVQPEV--RGTLGLLPTFLGNIGILTCF----IAGTFLNWYQLAFFGAC 152 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~g~~~~~----~~g~~~~w~~~~~~~~~ 152 (483)
.++...++.|.+|+++ |+...+.......+|..+++ .+....+||..+++..+
T Consensus 123 ~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 123 KANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred cCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 9999999999998885 35445555555555554433 33344689988877443
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.76 E-value=1.6e-15 Score=154.91 Aligned_cols=131 Identities=14% Similarity=0.043 Sum_probs=112.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIES-LGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~-~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+++.+..+.+++.+.+.++..++.+++|+++|| +|||+++.++.+++.++.++.+++++++.+.++|++.|+|.|...+
T Consensus 42 ~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 121 (475)
T TIGR00924 42 GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKA 121 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccC
Confidence 378899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCc---cchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHH
Q psy6142 102 ALPVYLGETVQPEV---RGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACI 153 (483)
Q Consensus 102 ~~~~~i~E~~p~~~---Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~ 153 (483)
+...++.|..|+++ |+...++......+|..+++.++. ..+|+..+......
T Consensus 122 ~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~ 180 (475)
T TIGR00924 122 NPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG 180 (475)
T ss_pred CHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 99999999998764 777777777777777665554433 34788887765543
No 85
>KOG1330|consensus
Probab=99.76 E-value=1.1e-18 Score=167.37 Aligned_cols=147 Identities=13% Similarity=0.130 Sum_probs=128.6
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
..++++....+++.+.+.++.++.++++|+++|||-||.++..+..+.+++.+.++++..+|++.++|.+.|+|-+...+
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ 140 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSP 140 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcc
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh-----hhHHHHHHhhHHHHHHHH-HHhcCcCCh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL-----NWYQLAFFGACIPVPFLI-CMFLIPETP 168 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~-----~w~~~~~~~~~~~~~~~~-~~~~~pESp 168 (483)
.++++++|.+|.++|++..+++.++..+|..++.+.|... .||+.+...+++.+++.+ ..++++|-+
T Consensus 141 ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 141 IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999998888876666555432 388877777777765544 456677743
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.76 E-value=8.6e-16 Score=157.41 Aligned_cols=159 Identities=15% Similarity=0.093 Sum_probs=118.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh------ccHHHHHHHHHHhhhcc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA------NGVPMILAGRCVAGFCV 96 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a------~~~~~l~~~R~l~G~~~ 96 (483)
+++.++.+.+++.++... ..++.+..|++.||+|||+++.++.+++.++.++++++ ++++.+++.|+++|+|.
T Consensus 56 ~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~ 134 (591)
T PTZ00207 56 RYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGC 134 (591)
T ss_pred HhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHH
Confidence 456788888888776332 33456678999999999999999999999999999998 68999999999999999
Q ss_pred cccccchhhhhcccCCCCccchhchHhHHHHHHHHH-HHHHhhhhh--hhHHHHHHhhHHHHHH-HHHHh--cCcCChhh
Q psy6142 97 GIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGIL-TCFIAGTFL--NWYQLAFFGACIPVPF-LICMF--LIPETPRW 170 (483)
Q Consensus 97 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~-~~~~~g~~~--~w~~~~~~~~~~~~~~-~~~~~--~~pESp~~ 170 (483)
+...+.....+.+++| ++||+..++...+..+|.. .+++...+. +|+..+++...++++. ++... ..||+|+|
T Consensus 135 ~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~ 213 (591)
T PTZ00207 135 MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLT 213 (591)
T ss_pred HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhh
Confidence 9888888889999997 7799999888888888864 344433333 6776666655554333 33333 35788887
Q ss_pred hhhcCCHHHHHHH
Q psy6142 171 YIGRNKQKQARKA 183 (483)
Q Consensus 171 l~~~~~~~~a~~~ 183 (483)
...+++.+++++.
T Consensus 214 ~~~~~~~~~~~~~ 226 (591)
T PTZ00207 214 GYQEKHLDEEEKA 226 (591)
T ss_pred cccccCCCHHHHH
Confidence 6665544444443
No 87
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.75 E-value=2e-15 Score=150.38 Aligned_cols=330 Identities=12% Similarity=0.086 Sum_probs=179.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchh----HHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRR----TTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr----~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g 97 (483)
+|.+.+..+.++..+++.++..++++++|+++||+||| +.+...... ........+++++.+++.|++.|++.+
T Consensus 32 ~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~l~g~~~~ 109 (382)
T PRK11128 32 KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAHSFWLLFVAIGLFNLFFS 109 (382)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcccHHHHHHHHHHHHHHHc
Confidence 45678899999999999999999999999999999994 333222222 222344456889999999999999988
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhh
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIG 173 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~ 173 (483)
...+...+++.++. ++|++..+.......+|..+++.++ ...+||..++......+...+...+.||.++
T Consensus 110 ~~~~~~~a~~~~~~--~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~---- 183 (382)
T PRK11128 110 PLVPLTDALANTWQ--KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP---- 183 (382)
T ss_pred ccccHHHHHHHHHH--hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----
Confidence 88888777777763 4455544444444455544444443 3458888776655433333333334455321
Q ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhh
Q psy6142 174 RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASL 253 (483)
Q Consensus 174 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (483)
++++++. .++...+.++.+|++.........++..... ..+....
T Consensus 184 ~~~~~~~-------------------------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~--- 228 (382)
T PRK11128 184 QGESRQQ-------------------------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSH-AAYYGFS--- 228 (382)
T ss_pred ccccccc-------------------------------cccccchHHHHHcChhHHHHHHHHHHHHHHh-HhHHHHH---
Confidence 1100000 0000112344455433332222211111100 0000000
Q ss_pred hhccccccccccccccCCCcccccccCCCCCchhhhhhCCC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHh
Q psy6142 254 TVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISS 332 (483)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~ 332 (483)
|.+ .. +.+.+ .+.........+..++..++.+++.||+|+|+.+..+.
T Consensus 229 --------------------~~~----------~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~ 277 (382)
T PRK11128 229 --------------------AIY----------WQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSA 277 (382)
T ss_pred --------------------HHH----------HH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 000 00 01111 11223333556678888899999999999999987776
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHH-HHHHHH
Q psy6142 333 TAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFN-WTCTFI 411 (483)
Q Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~-~~~~~~ 411 (483)
+...+....+.. . +..+...+..++..++++... +....+..+. |++.+++..++..... ..+..+
T Consensus 278 ~~~~~~~~~~~~-----~------~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i 344 (382)
T PRK11128 278 ICGVVRWGLMGS-----T------TALPWLIVIQILHCGTFTVCH-LAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAI 344 (382)
T ss_pred HHHHHHHHHHHh-----h------hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHH
Confidence 555544332211 1 112333444444444444332 2222355565 5556688888765443 344456
Q ss_pred HHHHHHHHHHHhCcchhHHHHHHHHHHH
Q psy6142 412 VTKTFNDLTALLGTHGAFWLFGVVCLVG 439 (483)
Q Consensus 412 ~~~~~~~~~~~~g~~~~f~i~~~~~~i~ 439 (483)
++...+.+.+..|. ..++..+++.+++
T Consensus 345 g~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 345 MTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 67777777777665 3555555555444
No 88
>KOG2533|consensus
Probab=99.73 E-value=2.8e-16 Score=158.11 Aligned_cols=150 Identities=16% Similarity=0.210 Sum_probs=130.5
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccc
Q psy6142 20 EYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~ 99 (483)
..+|.++...+.+++.+++++|-++|.+..|++.||+.=.+.+..+.+...+.+++.....|++.+++.|++.|+.-++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 55788889999999999999999999999999999999888888999999999988888999999999999999999999
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh----------hhhhHHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT----------FLNWYQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----------~~~w~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
.|....++.-+..+++||...++...+..+|.+.+.+++. ..+||+.|.+...+.++. ++.++++|+.|
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 9999999999999999999988888777776655554433 347999998877766555 45567799999
Q ss_pred h
Q psy6142 169 R 169 (483)
Q Consensus 169 ~ 169 (483)
.
T Consensus 232 ~ 232 (495)
T KOG2533|consen 232 S 232 (495)
T ss_pred h
Confidence 7
No 89
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.73 E-value=2.6e-15 Score=150.81 Aligned_cols=383 Identities=18% Similarity=0.185 Sum_probs=210.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhh----ccchhHHHHHh-hHHHHHHHHHHHhhccHHHHH-----------
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIE----SLGRRTTILST-GLPFIVSFLLIALANGVPMIL----------- 86 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D----~~GRr~~l~~~-~~l~~~~~~l~~~a~~~~~l~----------- 86 (483)
+.+.+..+.+++..+..+..++..++.|+++| |+|||+.++++ .....++-++.+++++...++
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~ 112 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPR 112 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhH
Confidence 46678888999999999999999999999999 59999999886 555556666777776653221
Q ss_pred -HHHHHhh-----hcccccccchhhhhcccCCCCcc--chhchHhHHHHHHHHHHHHHhhhhhh----------------
Q psy6142 87 -AGRCVAG-----FCVGIASLALPVYLGETVQPEVR--GTLGLLPTFLGNIGILTCFIAGTFLN---------------- 142 (483)
Q Consensus 87 -~~R~l~G-----~~~g~~~~~~~~~i~E~~p~~~R--g~~~~~~~~~~~~g~~~~~~~g~~~~---------------- 142 (483)
+.+++.| ++.........+++.|.+|+++| +...+..+....+|.++++.+|.+..
T Consensus 113 ~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~ 192 (477)
T TIGR01301 113 AIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVS 192 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccc
Confidence 1333444 47777777888999999999876 46777888888888888877765432
Q ss_pred ---hHHHHHHhhHHHHHH-HHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccc
Q psy6142 143 ---WYQLAFFGACIPVPF-LICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTG 218 (483)
Q Consensus 143 ---w~~~~~~~~~~~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (483)
-+..|.+.++..+.. ++..+.++|.|.. ..++.++ + +.++. .+.+....
T Consensus 193 ~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~--~~~~~~~--~---~~~~~--------------------~~~~~~~~ 245 (477)
T TIGR01301 193 CANLKSCFLIDIILLAILTYIALSAVKENPLI--GSDDFIN--S---EAAPP--------------------SKHGEEAF 245 (477)
T ss_pred cchHHHHHHHHHHHHHHHHHHHeeeeeccCCC--ccccchh--h---hcccc--------------------cccchhhh
Confidence 233444444433332 3344567887631 1111000 0 00000 00000112
Q ss_pred hhhhhhhc-hh-hHHHHHHHHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCc
Q psy6142 219 CSEVFKAM-YM-RPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTIN 296 (483)
Q Consensus 219 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (483)
.+++++.. .. +.+......+++.++.......+ .+-..+.- .|+... . .+ ...+.+.. .
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y-~T~~vg~~--------------v~~~~~-~-~~-~~y~~gvr-~ 306 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILF-DTDWMGRE--------------VYGGSV-N-QG-AKYDDGVR-A 306 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHH--------------HcCCCC-c-ch-hHHHHHHH-H
Confidence 23333321 11 22333333444444333222221 00000000 000000 0 00 00000000 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccc-hHHHHHHhHHHHHHHHHHHHHHhhccCC-C-------Cccccc--hHHHHH
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGR-KILLYISSTAMILTLATLGTFFYFKSTG-S-------DVSELG--WLPLLS 365 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GR-r~~l~~~~~~~~~~~~~l~~~~~~~~~~-~-------~~~~~~--~~~~~~ 365 (483)
..+..+..++.+.+.+++-.++.+|+|+ |+....+.++..+++......-....+. . -....+ +..++.
T Consensus 307 G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 307 GAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHH
Confidence 1345566677777888888999999995 6776666555555544332221110000 0 000011 333333
Q ss_pred HHHHHHHHhccccchhhhhhcccCCccch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhHHHHHHHHHHHHH
Q psy6142 366 FVVYVIGFSIGFGSIPWLMMGEILPAKIR--GSAASLATAFNWTCTFIVTKTFNDLTALLG--THGAFWLFGVVCLVGLF 441 (483)
Q Consensus 366 ~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~f~i~~~~~~i~~i 441 (483)
+...++.++.- .++||.+.+|..|++-| |..+|+-+.+--+...+.....+...+..| ...++.+.++..+++.+
T Consensus 387 ~~~~Gi~~A~~-~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~ 465 (477)
T TIGR01301 387 FAILGIPLAIT-YSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGL 465 (477)
T ss_pred HHHhhHHHHHH-HHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHH
Confidence 33333333322 36889999998886555 777787777665666666655555455544 34466677788888888
Q ss_pred HhhhhcccCCC
Q psy6142 442 FVIIFVPETQG 452 (483)
Q Consensus 442 ~~~~~lpet~~ 452 (483)
.+.+.+|.++.
T Consensus 466 ~~~~~~~~~~~ 476 (477)
T TIGR01301 466 LALILLPRPRV 476 (477)
T ss_pred HHHHhCCCCCC
Confidence 88888998764
No 90
>KOG2615|consensus
Probab=99.72 E-value=2.9e-16 Score=146.85 Aligned_cols=114 Identities=19% Similarity=0.274 Sum_probs=100.4
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhh
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~ 106 (483)
+..-.+.++|.|.++.++.++.+|.++||||||++++.+....++..++.+++.|+..+++.|++.|+.-|- ..+..+|
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHHH
Confidence 444578899999999999999999999999999999999999999999999999997778889999997655 4678899
Q ss_pred hcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh
Q psy6142 107 LGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL 141 (483)
Q Consensus 107 i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~ 141 (483)
++|..++|+|+...+..++++.+|-++++.+|.++
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 99999999999998888888888876666665544
No 91
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.72 E-value=6.3e-15 Score=150.49 Aligned_cols=349 Identities=16% Similarity=0.162 Sum_probs=208.3
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh-----ccHHHHHHHHHHhhhccccc
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA-----NGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a-----~~~~~l~~~R~l~G~~~g~~ 99 (483)
.-|....+++..+..+-.++-+++.|.++||+.|||.++.+.++..+..++.++. .+.+.+++.-++.|++.+..
T Consensus 41 t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~ 120 (524)
T PF05977_consen 41 TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFF 120 (524)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHH
Confidence 3456677788888889999999999999999999999999998887666554442 47889999999999999999
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh-hh---hhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcC
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT-FL---NWYQLAFFGACIPVPFLICMFLIPETPRWYIGRN 175 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-~~---~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~ 175 (483)
.+...+++.|..|+++...+.++.+....+..++++.+|. .+ +-...+.+.++.-++.+......+..+ .+.
T Consensus 121 ~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~----~~~ 196 (524)
T PF05977_consen 121 NPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP----PPS 196 (524)
T ss_pred HHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc----ccc
Confidence 9999999999999999988888888887777555544433 33 223344443332222222222222111 000
Q ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhh
Q psy6142 176 KQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTV 255 (483)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (483)
+ .+.++.. .++.+ +.+-..+.+..+..+....+..+.. ..+..
T Consensus 197 ~-~~~e~~~--------------~~l~~--------------G~ryv~~~~~l~~~l~~~~~~~l~~-~a~~a------- 239 (524)
T PF05977_consen 197 S-LPRERFF--------------SALRE--------------GLRYVRSSPPLRSVLLRSFLFNLFA-SAVWA------- 239 (524)
T ss_pred c-cchhhhh--------------hhHHH--------------HHHHHhcchHHHHHHHHHHHHHHhh-hHHHH-------
Confidence 0 0000000 00100 1111222222222221111111000 00000
Q ss_pred ccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHH
Q psy6142 256 SLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAM 335 (483)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~ 335 (483)
.+|.+. .....++....++.....+++.++++++.+++-+|+++++++..+.+..
T Consensus 240 ----------------LlPl~a---------~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 240 ----------------LLPLFA---------RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred ----------------hhhHHH---------HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHH
Confidence 011110 0111122223456677788999999999999999999988877666555
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTK 414 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~ 414 (483)
.+++..++.. ...+.....++ ..|.+.... +.......+..|.++||+..|+..+....+..++..
T Consensus 295 a~~~~~lal~-----------~~~~~~~~~l~--l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsl 361 (524)
T PF05977_consen 295 ALALLLLALS-----------PSFWLALIALF--LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSL 361 (524)
T ss_pred HHHHHHHhcc-----------hHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 5444333221 11233333333 333332221 223456778999999999999998888788888888
Q ss_pred HHHHHHHHhCcchhHHHHHHHHHHHHHHhhh-hcccCCC
Q psy6142 415 TFNDLTALLGTHGAFWLFGVVCLVGLFFVII-FVPETQG 452 (483)
Q Consensus 415 ~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~-~lpet~~ 452 (483)
+.+.+.+..|...++.+.++..+++.++.+. -+|+.+.
T Consensus 362 l~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~~~~ 400 (524)
T PF05977_consen 362 LWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQGEE 400 (524)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 8888888888888887766665555444332 2344443
No 92
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.71 E-value=9.7e-17 Score=168.49 Aligned_cols=116 Identities=11% Similarity=0.020 Sum_probs=105.5
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc----------------------
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN---------------------- 80 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~---------------------- 80 (483)
+++++..+.+++.+.+.+|..++.++.|+++||+|||+.+.++++++.+++++.++++
T Consensus 62 ~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~ 141 (633)
T TIGR00805 62 RFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSAN 141 (633)
T ss_pred hhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccc
Confidence 4558899999999999999999999999999999999999999999999999998874
Q ss_pred -----------------------------cHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHH
Q psy6142 81 -----------------------------GVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI 131 (483)
Q Consensus 81 -----------------------------~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~ 131 (483)
.+.+++++|+++|+|.+...+...+|++|..|+++|++..++......+|+
T Consensus 142 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~ 221 (633)
T TIGR00805 142 SFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGP 221 (633)
T ss_pred cccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhh
Confidence 245778999999999999999999999999999999999999888888887
Q ss_pred HHHHHhh
Q psy6142 132 LTCFIAG 138 (483)
Q Consensus 132 ~~~~~~g 138 (483)
.++++++
T Consensus 222 ~lG~llg 228 (633)
T TIGR00805 222 AFGYLLG 228 (633)
T ss_pred HHHHHHH
Confidence 7776554
No 93
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.71 E-value=1.3e-14 Score=149.00 Aligned_cols=133 Identities=13% Similarity=0.097 Sum_probs=101.9
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHhhHHHHHHHHHHHhhc-cHHHHHHHHHHhhhccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIES-LGRRTTILSTGLPFIVSFLLIALAN-GVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~-~GRr~~l~~~~~l~~~~~~l~~~a~-~~~~l~~~R~l~G~~~g~~ 99 (483)
++++.+..+.++..+.+........+++|+++|| +|||++++++.+++.++..++++++ +.+.+.++|+++|++.|..
T Consensus 50 ~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~ 129 (500)
T PRK09584 50 KQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLF 129 (500)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcc
Confidence 3566777788888887776666667899999999 5999999999999999999999975 5667788999999999999
Q ss_pred ccchhhhhcccCCCCccc--hhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHH
Q psy6142 100 SLALPVYLGETVQPEVRG--TLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIP 154 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg--~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~ 154 (483)
.+....++.|.+|++.+. ...++...+..+|..+++.++ ...+||..+.+.....
T Consensus 130 ~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 130 KANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred cCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 899899999999876433 344455556666655554333 2357898887765433
No 94
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.67 E-value=4.1e-16 Score=160.36 Aligned_cols=165 Identities=16% Similarity=0.104 Sum_probs=125.3
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHH---HHhhccHHHHHHHHHHhhhccccccc
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLL---IALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l---~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+.+..+..+..+...+|..+|.++.|+++||+|||++++.+.++..++++. ...+++...+.++|++.|++.++...
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 361 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTG 361 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 445555666777788999999999999999999999988887655444332 22345678888999999998877777
Q ss_pred chhhhhcccCCCCccchhch-HhHHHHHHHHHHHHHhhhhh----hhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhc--
Q psy6142 102 ALPVYLGETVQPEVRGTLGL-LPTFLGNIGILTCFIAGTFL----NWYQLAFFGACIPVPFLICMFLIPETPRWYIGR-- 174 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~-~~~~~~~~g~~~~~~~g~~~----~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~-- 174 (483)
....++.|.+|++.||+..+ ..+....+|.+.+.+.+... +|+...++...+.++.++..+++||||+|+.+|
T Consensus 362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~ 441 (490)
T PRK10642 362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT 441 (490)
T ss_pred HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCcc
Confidence 78888999999999998655 46666666766666665543 356555555555555666667789999998865
Q ss_pred ---CCHHHHHHHHHHHhC
Q psy6142 175 ---NKQKQARKALQWLRG 189 (483)
Q Consensus 175 ---~~~~~a~~~l~~~~~ 189 (483)
||.|||++.+++++.
T Consensus 442 ~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 442 PAASDIQEAKEILVEHYD 459 (490)
T ss_pred ccccchhhHHHHhhcccc
Confidence 999999999998873
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.65 E-value=2.2e-13 Score=136.06 Aligned_cols=342 Identities=12% Similarity=0.004 Sum_probs=183.8
Q ss_pred CCcccccchhhHHH--HHHHHHHHHHHhhh-hhhhhccchhHHHHHhhHHHHH-HHHHHH-h--hcc-HHHHHHHHHHhh
Q psy6142 22 DDVKINYIQASWIG--SLMPLSALFGGMAG-GPLIESLGRRTTILSTGLPFIV-SFLLIA-L--ANG-VPMILAGRCVAG 93 (483)
Q Consensus 22 ~~~~~~~~~~~~~~--s~~~~g~~lG~~~~-G~l~D~~GRr~~l~~~~~l~~~-~~~l~~-~--a~~-~~~l~~~R~l~G 93 (483)
+|.+.+..+.+.+. ++.....++.++++ ++..||+||||..++.+.+... .....+ + ..+ ...+...-++.+
T Consensus 29 ~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (390)
T TIGR02718 29 REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACAS 108 (390)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHH
Confidence 45567888899874 56688888888888 5589999999997666643222 222222 2 222 234444555565
Q ss_pred hcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHH----hhhhhhhHHHHHHhhHHHHHHHHHHhcCcCChh
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI----AGTFLNWYQLAFFGACIPVPFLICMFLIPETPR 169 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~----~g~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~ 169 (483)
+..+..-+..-.+..|..++++++........+..+|.+++.. +....+||..+++.....+...+..++++|.++
T Consensus 109 ~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~ 188 (390)
T TIGR02718 109 LASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV 188 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 6666666667777888888888888877777777777665553 233568998888766665544444444444321
Q ss_pred hhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHH
Q psy6142 170 WYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAV 249 (483)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (483)
.+.+.++ + + ....++.+|++..+.......+...... ..
T Consensus 189 ---~~~~~~~--~--------------~------------------~~~~~~~l~~~~~~~~~~~~~l~~~~~~----~~ 227 (390)
T TIGR02718 189 ---ASPEAPL--A--------------R------------------RASLFRFFRRPLAWSLLALALLSAMTAV----SG 227 (390)
T ss_pred ---Cccccch--h--------------h------------------HHHHHHHHcCcCHHHHHHHHHHHHHHHH----HH
Confidence 0000000 0 0 0012234444333332222222111000 00
Q ss_pred HHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHH-HHHHHHHHHHHHhhhcccchHH
Q psy6142 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVG-VVNLLSVLIATALIDRLGRKIL 327 (483)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~i~~~lvdr~GRr~~ 327 (483)
.. +.. .+ .. +.+-+. +..+.....+ ...+++.++.+++.||+|+|+.
T Consensus 228 ~~----------------~~~----~~----------l~-~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 276 (390)
T TIGR02718 228 FG----------------LSK----LY----------LV-DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT 276 (390)
T ss_pred HH----------------Hhh----HH----------HH-hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 00 000 00 00 111111 1122223333 3556778899999999999998
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCc-cchhhhhHHHHHHHH
Q psy6142 328 LYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPA-KIRGSAASLATAFNW 406 (483)
Q Consensus 328 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~-~~R~~~~s~~~~~~~ 406 (483)
+..+........... ......... + ..........+..++.+...... .....+..++ +.|++..++.+.+..
T Consensus 277 l~~~~~~~~~~~~~~-~~~~~~~~~--~--~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 350 (390)
T TIGR02718 277 FILGVGLAGSLALLW-FAQAAFWLA--P--GIAVAWSCSAFGSLITGITSVAI-YTAFMRFAGDGDQAGTDVTAVQSTRD 350 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHHcccC--C--cHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCcccchHHHHHHHHHHHH
Confidence 877654432221111 111000000 0 01111111111112222222222 2333344554 899999999998888
Q ss_pred HHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Q psy6142 407 TCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i 441 (483)
++..+++...+.+.+..|+...|++.+++.+++.+
T Consensus 351 lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 351 LGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999998888888888888888777666665543
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.64 E-value=9.5e-15 Score=143.28 Aligned_cols=149 Identities=14% Similarity=0.150 Sum_probs=124.6
Q ss_pred Ccccccch-hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 23 DVKINYIQ-ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 23 ~~~~~~~~-~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
|++++..| .+.+.++++.+-.+..+..|+++||+|-|+++.++++..++.+++.++++++..+.+.|++.|++-|...
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~- 133 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI- 133 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 66788899 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh---hhhHHHHHHh---hHHHHHHHHHHhcCcCChhhhh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF---LNWYQLAFFG---ACIPVPFLICMFLIPETPRWYI 172 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~---~~w~~~~~~~---~~~~~~~~~~~~~~pESp~~l~ 172 (483)
....|+..++|+++|+++.++...+..+|.+++.+++.. ++||...... .....+.++..+++|--+|-+.
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhh
Confidence 999999999999999999999998888887665544432 3677554332 2223444556678884444333
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.62 E-value=1.7e-13 Score=140.37 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=79.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhh----ccchhHHHH-HhhHHHHHHHHHHHhhcc------HHHHHHHHHH
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIE----SLGRRTTIL-STGLPFIVSFLLIALANG------VPMILAGRCV 91 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D----~~GRr~~l~-~~~~l~~~~~~l~~~a~~------~~~l~~~R~l 91 (483)
..+++....+.+..+.-+--.+..+++|+++| |+||||.++ ++...+.++..+....++ +..+++.-++
T Consensus 36 v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l 115 (473)
T PRK10429 36 VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYIL 115 (473)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Confidence 35788888888888888888999999999999 679966655 566666666555544332 2345666667
Q ss_pred hhhcccccccchhhhhcccC-CCCccchhchHhHHHHHHH
Q psy6142 92 AGFCVGIASLALPVYLGETV-QPEVRGTLGLLPTFLGNIG 130 (483)
Q Consensus 92 ~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~g 130 (483)
.+++.....+...++..|.. .+++|.+..+....+..+|
T Consensus 116 ~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig 155 (473)
T PRK10429 116 WGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLA 155 (473)
T ss_pred HHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 77777777788888999998 5889998777755555544
No 98
>KOG2504|consensus
Probab=99.62 E-value=8.4e-15 Score=148.88 Aligned_cols=371 Identities=18% Similarity=0.222 Sum_probs=213.8
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHH-HHHHHHhhhcccccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMI-LAGRCVAGFCVGIASLA 102 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l-~~~R~l~G~~~g~~~~~ 102 (483)
++.+..+.+|+.++......+.+++.+.+.||||.|++.+.+.++..+|-++++|++++|.+ +..=++.|+|.|..+..
T Consensus 76 f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~p 155 (509)
T KOG2504|consen 76 FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLP 155 (509)
T ss_pred hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcc
Confidence 34566679999999999999999999999999999999999999999999999999999754 66778999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHH-HHHHhhh---hhhhHHHHHHhhHHHHHHHHHHhcC-cCChhhhhhcCCH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGIL-TCFIAGT---FLNWYQLAFFGACIPVPFLICMFLI-PETPRWYIGRNKQ 177 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~-~~~~~g~---~~~w~~~~~~~~~~~~~~~~~~~~~-pESp~~l~~~~~~ 177 (483)
..+.+..+++ |+|+.+.++......+|.. .+.+... ..+||...++...+.+-..+....+ |.+++-... .
T Consensus 156 aiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~ 231 (509)
T KOG2504|consen 156 AVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN---E 231 (509)
T ss_pred hhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---h
Confidence 9999998885 6688988887777777643 3433333 3579887766555444343333333 433322111 1
Q ss_pred HHHHHHHHHHhC-CCcc-----------hh----HHHHHHHHHhhccccccccCccch----hhhhhhchhhHHHHHHHH
Q psy6142 178 KQARKALQWLRG-KDAD-----------IS----REFAEIEKMNNEGNAAEDENSTGC----SEVFKAMYMRPLLISIGL 237 (483)
Q Consensus 178 ~~a~~~l~~~~~-~~~~-----------~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 237 (483)
++..+..+.... ...+ .. .+....++.+++.. .. ..+... .++++. +..+...+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~d~~ll~~----~~fl~~~~ 305 (509)
T KOG2504|consen 232 EKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWR-NS-PLQAFLSMLDLSLLKD----PKFLLLAL 305 (509)
T ss_pred hhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcccc-cc-chhhhhhhhhHHHHcC----chHHHHHH
Confidence 111111000000 0000 00 00000000000000 00 001111 233333 22222222
Q ss_pred HHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6142 238 MFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATA 317 (483)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 317 (483)
...-...+...... .+|.+ .....-+..+......+.++.+.++-++.|+
T Consensus 306 ~~~~~~~g~~~p~~--------------------~l~~~----------~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~ 355 (509)
T KOG2504|consen 306 SNLFAYLGFNVPFV--------------------YLPSY----------AKSLGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred HHHHHHHHHHHHHH--------------------HHHHH----------HhhcCCChhhhHHHHHHHHHhhhhhhhhhhh
Confidence 22111112211111 01111 0111112223456677889999999999999
Q ss_pred hhhcccchHHH--HHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhhhcccCCccch
Q psy6142 318 LIDRLGRKILL--YISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLMMGEILPAKIR 394 (483)
Q Consensus 318 lvdr~GRr~~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~Ei~P~~~R 394 (483)
+.|+...++.. .++.+...++...+ .+ .. ..+...+...+++ +..|. .......+.|+.+.+.=
T Consensus 356 laD~~~~~~~~~~~~~ll~~gl~~~~~--p~---~~------~~~~l~~~~~~fG--~~~g~~~~l~~~i~~~~~g~~~l 422 (509)
T KOG2504|consen 356 LADKPGIRALVLFLLTLLIAGLARLFL--PF---AT------TYVGLIVFSILFG--FCVGSFSSLTPVILVDLVGLEKL 422 (509)
T ss_pred hcCccccchHHHHHHHHHHHHHHHHHH--HH---hc------cHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcChhhc
Confidence 99998844433 33333233222111 11 10 1122333333333 33332 24445678899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHHHHhhhhcc
Q psy6142 395 GSAASLATAFNWTCTFIVTKTFNDLTALLG-THGAFWLFGVVCLVGLFFVIIFVP 448 (483)
Q Consensus 395 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~~lp 448 (483)
..+.|+...++.++..+++.+.+.+.+..+ +...|+..+++.+++.++ ++..|
T Consensus 423 ~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~-~~~~~ 476 (509)
T KOG2504|consen 423 SNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL-LLILR 476 (509)
T ss_pred chHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH-HHHhH
Confidence 999999999988888888877776666655 666787777777776543 34444
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.60 E-value=5e-13 Score=135.86 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=81.9
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhc----cchhHHHH-HhhHHHHHHHHHHHhhcc------HHHHHHHHH
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIES----LGRRTTIL-STGLPFIVSFLLIALANG------VPMILAGRC 90 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~----~GRr~~l~-~~~~l~~~~~~l~~~a~~------~~~l~~~R~ 90 (483)
++.+++..+.+.+.++.-+.-.+..++.|+++|| +||||.++ ++.....++..+....|+ +..+++.-+
T Consensus 38 ~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~ 117 (444)
T PRK09669 38 DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYI 117 (444)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4578889999999999999999999999999998 88866655 566666677666655654 345566666
Q ss_pred HhhhcccccccchhhhhcccC-CCCccchhchHhHHHHHHHHH
Q psy6142 91 VAGFCVGIASLALPVYLGETV-QPEVRGTLGLLPTFLGNIGIL 132 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~g~~ 132 (483)
+.+.+.........++..|.. ++++|.+..+.-.....+|..
T Consensus 118 l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 118 LLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred HHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 667666666666778888987 457788776666555555543
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.60 E-value=1.5e-13 Score=140.07 Aligned_cols=348 Identities=11% Similarity=0.055 Sum_probs=190.2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccc-----hhHHHHHhhHHHH-HHHHHHHhhccHH-HHHHHHHHhhh
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLG-----RRTTILSTGLPFI-VSFLLIALANGVP-MILAGRCVAGF 94 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~G-----Rr~~l~~~~~l~~-~~~~l~~~a~~~~-~l~~~R~l~G~ 94 (483)
++++++..+.+...+...+.-.+-.+ +|+++||++ ||+.++++.++.. ++....+..++.. ...+.+++.++
T Consensus 54 ~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 132 (468)
T TIGR00788 54 DDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAAL 132 (468)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 35778999998888988888888666 999999998 7777777776663 3333333345544 44458999999
Q ss_pred cccccccchhhhhcccCCCCccchhchHhHHHHH---HHHHHHHHh-h---hhhhhHHHHHHhhHHHHHHHHHHhcCcCC
Q psy6142 95 CVGIASLALPVYLGETVQPEVRGTLGLLPTFLGN---IGILTCFIA-G---TFLNWYQLAFFGACIPVPFLICMFLIPET 167 (483)
Q Consensus 95 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~---~g~~~~~~~-g---~~~~w~~~~~~~~~~~~~~~~~~~~~pES 167 (483)
+.+..-+..-.++.|..+ ++++..+...+..+. +|.+++..+ | ...+|+..+++.+...+...+...++||.
T Consensus 133 ~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 133 AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 999998899999999999 655555545443332 444443322 2 23468888877666665555556778886
Q ss_pred hhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhH
Q psy6142 168 PRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGIN 247 (483)
Q Consensus 168 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (483)
+.....+.++++.. ........... ..+ +.....+..++++...+.+. ..++....
T Consensus 212 ~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~-----------~~~~~l~~~l~~~~i~~~l~---fifl~~~~--- 267 (468)
T TIGR00788 212 RAFVRPRIGTYLEM----NMALLTLGVLA---NVK-----------VQILGLRGAIQLLEIAKPLI---FIFLSYAN--- 267 (468)
T ss_pred cccccccccccchh----hhhhhhhhHHH---HHH-----------HHHHHHHHHHhcHHHHHHHH---HHHHHHhh---
Confidence 31110110000000 00000000000 000 00001112223222211111 11110000
Q ss_pred HHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHH
Q psy6142 248 AVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKIL 327 (483)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~ 327 (483)
..+...... .+.+ .....+..+.+......+++.+++..+.+++.+|++.|+.
T Consensus 268 -------------~~~~~~~~f-----~~~~---------~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~ 320 (468)
T TIGR00788 268 -------------LPGASGSVF-----CATT---------QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL 320 (468)
T ss_pred -------------cCCCCceeE-----EEEc---------ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence 000000000 0000 0111122234556677789999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHH
Q psy6142 328 LYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWT 407 (483)
Q Consensus 328 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~ 407 (483)
+..+.++..++......... ..+-.......+.......+-.++.++++.+. ..++.+..|++.+++..++...+..+
T Consensus 321 l~~~~~l~~~~~~~~~~l~~-~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~l 398 (468)
T TIGR00788 321 FGVTTLLYTLSSLFDLILVK-RWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHL 398 (468)
T ss_pred HHHHHHHHHHHHhCceeeee-ccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHH
Confidence 88876655543322111100 00000000011112222223334444444333 56788999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhC
Q psy6142 408 CTFIVTKTFNDLTALLG 424 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~g 424 (483)
+..+.+.....+.+..|
T Consensus 399 g~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 399 GSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88888877777777777
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.55 E-value=2.4e-11 Score=122.95 Aligned_cols=353 Identities=22% Similarity=0.265 Sum_probs=205.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHH-hhHHHHHHHHHHHhh-c-cHHHHHHHHHHhhhcccccccchhhhh
Q psy6142 31 ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILS-TGLPFIVSFLLIALA-N-GVPMILAGRCVAGFCVGIASLALPVYL 107 (483)
Q Consensus 31 ~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~-~~~l~~~~~~l~~~a-~-~~~~l~~~R~l~G~~~g~~~~~~~~~i 107 (483)
.++..++..+-.++-.++.|-++|+-||||.++. ..++..+++.+..+. + +++...+.=++.-++.+...+...+|.
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567778888889999999999999998887654 445556666666663 3 345555566666667788888899999
Q ss_pred cccCCCCcc--------------------------chhchHhHHHHHHHHHHHHHhhhhh------------hhHHHHHH
Q psy6142 108 GETVQPEVR--------------------------GTLGLLPTFLGNIGILTCFIAGTFL------------NWYQLAFF 149 (483)
Q Consensus 108 ~E~~p~~~R--------------------------g~~~~~~~~~~~~g~~~~~~~g~~~------------~w~~~~~~ 149 (483)
-|..+++.+ ++..+..-....+|.++..++.... +-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999988 8877776666666655554443321 12444444
Q ss_pred hhH-HHHHHHHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhc-h
Q psy6142 150 GAC-IPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAM-Y 227 (483)
Q Consensus 150 ~~~-~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 227 (483)
.++ +.+..+...+++||-|+.-..+....-.+...+ ++ .+.+|+. .
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~--------------~l------------------~~t~k~~~~ 279 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFK--------------RL------------------WRTFKEIRK 279 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHH--------------HH------------------HHHHHHHHh
Confidence 333 334445566778887642000000000111111 11 1112211 1
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchhHHHHHHHH
Q psy6142 228 MRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINENYCTIIVGV 306 (483)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 306 (483)
.+.+...+ +..+-...|++.+.....+ |. .+..+ +..+.....+...+
T Consensus 280 ~~~~~~fL-ia~~l~~dg~~ti~~~~~i------------~a------------------~~~lg~s~~~l~~~~l~~~i 328 (477)
T PF11700_consen 280 LRQLFLFL-IAYFLYSDGVNTIISFAGI------------YA------------------TEVLGMSTTQLIVFGLVVQI 328 (477)
T ss_pred ChHHHHHH-HHHHHHHHHHHHHHHHHHH------------HH------------------HHhcCcCHHHHHHHHHHHHH
Confidence 12222222 2222122344444331110 10 00111 11123456778889
Q ss_pred HHHHHHHHHHHhhhcccch--HHHHHHhHHHHHHHHHHHHH-HhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhh
Q psy6142 307 VNLLSVLIATALIDRLGRK--ILLYISSTAMILTLATLGTF-FYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPW 382 (483)
Q Consensus 307 ~~~~~~~i~~~lvdr~GRr--~~l~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~ 382 (483)
..++|+++.+++.||+|.| +.++.+.....+... .+.+ +.....+ -+..+.+.+...+ .|..+|. .+..-
T Consensus 329 ~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~-~g~~G~~~~~~g---~~~~~~f~~~a~~--~G~~~G~~qs~sR 402 (477)
T PF11700_consen 329 VAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL-YGLFGFWPSFFG---LKSPWEFWVLAVL--IGLFMGGIQSASR 402 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH-HHHHHhhhcccC---cccHHHHHHHHHH--HHHHhhhHHHHHH
Confidence 9999999999999999999 777665444322211 1111 1111111 1122333333332 3333343 35566
Q ss_pred hhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 383 LMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG-THGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 383 ~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
.+.+|+.|+...+.-.|+....+...+++++.+++.+.+..| .+..++...+..++++++ +++.++.|++
T Consensus 403 s~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~l-l~~v~~~~g~ 473 (477)
T PF11700_consen 403 SLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLIL-LFFVDVEKGR 473 (477)
T ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH-Hhhccchhhh
Confidence 788999999999999999999999999999999988888776 666776666666666554 3555555554
No 102
>KOG3764|consensus
Probab=99.54 E-value=7.2e-14 Score=131.75 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=116.6
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 21 YDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
.++...++.+.+++-+++-+-+.+-.++.|.+.||+|+|..++.+...+...+++.++..+++++++.|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 45566677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcccCCCCc-cchhchHhHHHHHHHHHHHHHhhhh----hhhHHHHHHhhHHHHHHHHHHhc
Q psy6142 101 LALPVYLGETVQPEV-RGTLGLLPTFLGNIGILTCFIAGTF----LNWYQLAFFGACIPVPFLICMFL 163 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~-Rg~~~~~~~~~~~~g~~~~~~~g~~----~~w~~~~~~~~~~~~~~~~~~~~ 163 (483)
++..+++.+.+|++. |++..+..-.+.++|-++++..|.+ .+....|.+.+++.++-....++
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHh
Confidence 999999999999886 6887777777777776665555443 24455665544444333333333
No 103
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=6.1e-12 Score=119.65 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=104.7
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH---hhccHHHHHHHHHHhhhcccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA---LANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~---~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
+++++.|.+.+...++.|-+++++..|++.+|+|+|+.++++..++++|..+.. -..++.+++++=|+.|.|.|..-
T Consensus 43 f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~Le 122 (422)
T COG0738 43 FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLE 122 (422)
T ss_pred hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHH
Confidence 448999999999999999999999999999999999999999999999999884 55788899999999999999999
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
+....|++..-|++......++.+.+..+|.+.++.++.
T Consensus 123 taaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 123 TAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred hccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 999999999999987777788888888888776665543
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.52 E-value=4e-11 Score=119.03 Aligned_cols=349 Identities=15% Similarity=0.167 Sum_probs=188.3
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccc-hhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLG-RRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~G-Rr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
++.+.+..|.+.+.++..+..+++.+++|+++||++ +|+.+.+..++..+........++++.+++.-++..+......
T Consensus 30 ~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~ 109 (400)
T PF03825_consen 30 ESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTM 109 (400)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHH
Confidence 456678899999999999999999999999999987 5666767777777777777788899988888888888777777
Q ss_pred cchhhhhcccCCCCccc--hhchHhHHHHHHHHHH-HHHhhhhhhh---HHHHHHhhHHHHHHHHHHhcCcCChhhhhhc
Q psy6142 101 LALPVYLGETVQPEVRG--TLGLLPTFLGNIGILT-CFIAGTFLNW---YQLAFFGACIPVPFLICMFLIPETPRWYIGR 174 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg--~~~~~~~~~~~~g~~~-~~~~g~~~~w---~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~ 174 (483)
+..-++..+...++.+. +.=...+.++.++... ........++ ...+++.....++.....+.+|+.|. +
T Consensus 110 pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~----~ 185 (400)
T PF03825_consen 110 PLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPP----K 185 (400)
T ss_pred HHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCcc----c
Confidence 78888887777643221 2112222333332211 1111111111 12233333333333344556787761 1
Q ss_pred CCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhh-hHHHHHhh
Q psy6142 175 NKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSG-INAVLASL 253 (483)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (483)
.+.++..+ +.......+++|++.....++.. ...+...+ ++.
T Consensus 186 ~~~~~~~~------------------------------~~~~~~~~~llk~~~~~~Fll~~--~l~~~~~~~~~~----- 228 (400)
T PF03825_consen 186 RSAKESVK------------------------------KLLGLDALKLLKNPRFLVFLLAA--FLIGISHAAYYT----- 228 (400)
T ss_pred cccCCCcc------------------------------cccchHHHHHhcCccHHHHHHHH--HHHHHHHHHHHH-----
Confidence 11000000 00001112345543322221111 11111101 000
Q ss_pred hhccccccccccccccCCCcccccccCCCCCchhhhhhC-CC-CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q psy6142 254 TVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-ST-INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYIS 331 (483)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~ 331 (483)
|.+. ..++.+ .. ........+..+.+++.-..++++..|+|.|++++.+
T Consensus 229 --------------f~~~---------------yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 229 --------------FFSI---------------YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred --------------HHHH---------------HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 1000 111111 11 1122233455678999999999999999999999887
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccccchHHHHH----HHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHH-
Q psy6142 332 STAMILTLATLGTFFYFKSTGSDVSELGWLPLLS----FVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNW- 406 (483)
Q Consensus 332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~- 406 (483)
.+..++=..... +..++ .+..... ..+.+.+++... .....|+.|..|++.|++++++.+.+..
T Consensus 280 ~~~~~vR~~l~a---~~~~~-------~~~~~~~~~l~q~lhG~tf~~~~-~a~~~yi~~~~p~~~~at~Q~l~~~~~~G 348 (400)
T PF03825_consen 280 LVAYAVRWLLYA---YFSDP-------WPFIVALQLLGQLLHGLTFGLFH-AASVRYIDRIAPPELRATAQGLYSALSFG 348 (400)
T ss_pred HHHHHHHHHHHH---HhcCC-------cHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHhCCccchHHHHHHHHHHHhh
Confidence 654443332221 11110 1111111 122344443332 2334688899999999999998876543
Q ss_pred HHHHHHHHHHHHHHHHhCcchh------HHHHHHHHHHHHHHhhhhcccCC
Q psy6142 407 TCTFIVTKTFNDLTALLGTHGA------FWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~g~~~~------f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
++..+++...+.+.+..|.+.. +.+.++..++..++.+++.+|++
T Consensus 349 lg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 349 LGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 5666677777777777665433 23333333343333334445543
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.52 E-value=4.4e-12 Score=128.33 Aligned_cols=322 Identities=19% Similarity=0.204 Sum_probs=183.8
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhh----ccchhHHHH-HhhHHHHHHHHHHHhh-c-------cHHHHHHHHH
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIE----SLGRRTTIL-STGLPFIVSFLLIALA-N-------GVPMILAGRC 90 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D----~~GRr~~l~-~~~~l~~~~~~l~~~a-~-------~~~~l~~~R~ 90 (483)
.+++....+.+..+..+-.++-.++.|+++| |+||||.++ ++..+..++.++.... | ....+.+.-+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 3566666666666666777777789999999 899998876 4556667777666655 4 1224577777
Q ss_pred HhhhcccccccchhhhhcccCCC-CccchhchHhHHHHHHHHHHH-HHhhhhh----------hhHHHHHHhhHHHHHH-
Q psy6142 91 VAGFCVGIASLALPVYLGETVQP-EVRGTLGLLPTFLGNIGILTC-FIAGTFL----------NWYQLAFFGACIPVPF- 157 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~~~~~g~~~~-~~~g~~~----------~w~~~~~~~~~~~~~~- 157 (483)
+..++.........++..|..++ ++|.+..+..+.+..+|.++. .+..... +|+....+.+++.++.
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 77999999988899999999984 689998888888777776432 2222222 4555554444333322
Q ss_pred HHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHH
Q psy6142 158 LICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGL 237 (483)
Q Consensus 158 ~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (483)
++..+..+|. +.+.++.+ +..+.....++.++++..+.......+
T Consensus 192 ~i~~~~~ke~------~~~~~~~~-----------------------------~~~~~~~~~~~~~~nr~~~~l~~~~~~ 236 (428)
T PF13347_consen 192 LITFFFVKER------SVEVTEQE-----------------------------KKISLRDSLRSLFRNRPFRILLLAFFL 236 (428)
T ss_pred hhhhheeeec------cccccccc-----------------------------cccccccchhhhcccchHHHHHHHHHH
Confidence 2334455661 01100000 001111233455555444433332222
Q ss_pred HHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6142 238 MFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATA 317 (483)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 317 (483)
++... ..... ...|+ .....+.............+..+++.++.++
T Consensus 237 ---~~~~~-~~~~~-------------~~~y~-----------------~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (428)
T PF13347_consen 237 ---QWLAF-ALMNT-------------FLPYY-----------------FTYVLGNEGLISIFMLIFFVASIVGSPLWGR 282 (428)
T ss_pred ---HHhhh-hhhhh-------------HHHHH-----------------HHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 21110 00000 00010 0111111122334556667888999999999
Q ss_pred hhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCc------
Q psy6142 318 LIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPA------ 391 (483)
Q Consensus 318 lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~------ 391 (483)
+.||+|+|+....+..+..++...+..... +..+...+...+..++.+... .+++.+.+|+.+.
T Consensus 283 l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg 352 (428)
T PF13347_consen 283 LSKRFGKKKVYIIGLLLAALGFLLLFFLGP---------GSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTG 352 (428)
T ss_pred HHHHccceeehhhhHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcC
Confidence 999999999998887766655543322111 112334444444444443332 5667888888773
Q ss_pred -cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy6142 392 -KIRGSAASLATAFNWTCTFIVTKTFNDLTALLG 424 (483)
Q Consensus 392 -~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g 424 (483)
+..|...|+.+....++..+.......+.+..|
T Consensus 353 ~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 353 RRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred CCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 334666677677766777776666655555444
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.51 E-value=2.3e-11 Score=122.95 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=97.3
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHhhHHHHHHHHHHHhhc-cHHHHHHHHHHhhhcccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESL-GRRTTILSTGLPFIVSFLLIALAN-GVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l~~~~~l~~~~~~l~~~a~-~~~~l~~~R~l~G~~~g~~~ 100 (483)
+++.+..+.+++.+.+.....++.+++|+++||+ ||||+++++.++..++.++.++.+ +...+.++-.+.++|.|...
T Consensus 39 ~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~ 118 (493)
T PRK15462 39 QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFK 118 (493)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccccc
Confidence 3567888899999999999999999999999999 999999999999999988777654 22334444445556667777
Q ss_pred cchhhhhcccCCCC--ccchhchHhHHHHHHHHHHHHHhh-h---hhhhHHHHHHhhH
Q psy6142 101 LALPVYLGETVQPE--VRGTLGLLPTFLGNIGILTCFIAG-T---FLNWYQLAFFGAC 152 (483)
Q Consensus 101 ~~~~~~i~E~~p~~--~Rg~~~~~~~~~~~~g~~~~~~~g-~---~~~w~~~~~~~~~ 152 (483)
++..+++.|..|++ +|....++......+|..+++.+. . ..+|+..+..+.+
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 77889999999986 677666666555556655444333 2 3478888776544
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.51 E-value=1.3e-11 Score=125.67 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=70.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc----chhHHH-HHhhHHHHHHHHHHHhhc-----c--HHHHHHHHH
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESL----GRRTTI-LSTGLPFIVSFLLIALAN-----G--VPMILAGRC 90 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~----GRr~~l-~~~~~l~~~~~~l~~~a~-----~--~~~l~~~R~ 90 (483)
..+.+..+.+.+.++..+...+..+++|+++||. ||||.+ .++.+...+.+++....+ + ...+++.-+
T Consensus 38 ~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (448)
T PRK09848 38 VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYM 117 (448)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHH
Confidence 3577888999999999999999999999999986 888876 444444444444432211 2 122344556
Q ss_pred HhhhcccccccchhhhhcccCCC-CccchhchHhHH
Q psy6142 91 VAGFCVGIASLALPVYLGETVQP-EVRGTLGLLPTF 125 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~ 125 (483)
+.+++.+...+...++..|..++ ++|.+..+.-..
T Consensus 118 ~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~ 153 (448)
T PRK09848 118 GLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGI 153 (448)
T ss_pred HHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHH
Confidence 67777777777777777776655 568776555443
No 108
>PRK11462 putative transporter; Provisional
Probab=99.42 E-value=2.5e-10 Score=116.29 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=80.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhh----ccchhHHHHH-hhHHHHHHHHHHHhhcc------HHHHHHHHHH
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIE----SLGRRTTILS-TGLPFIVSFLLIALANG------VPMILAGRCV 91 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D----~~GRr~~l~~-~~~l~~~~~~l~~~a~~------~~~l~~~R~l 91 (483)
..+++....+.+..+.-+-=.+--++.|+++| |+||||.+++ +...+.++..+....|+ ...+.+.=++
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~ 118 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTL 118 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 34555555555555555556688899999999 4799988775 44666777666655553 3345556666
Q ss_pred hhhcccccccchhhhhcccCC-CCccchhchHhHHHHHHHHHHH
Q psy6142 92 AGFCVGIASLALPVYLGETVQ-PEVRGTLGLLPTFLGNIGILTC 134 (483)
Q Consensus 92 ~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~g~~~~ 134 (483)
-.++.........++..|..+ +++|.+..+.-..+..+|..+.
T Consensus 119 ~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~ 162 (460)
T PRK11462 119 LTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLS 162 (460)
T ss_pred HHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 688888888888889999988 7789898888887777765443
No 109
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.42 E-value=1.3e-10 Score=109.05 Aligned_cols=331 Identities=16% Similarity=0.200 Sum_probs=197.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|.+.|....++++++..+...+.+++..+++.|+|-++.+.+++++..+|.++-... +.+.++.+-.+.|.|++...+
T Consensus 40 ~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nV 118 (395)
T COG2807 40 QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINV 118 (395)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHH
Confidence 5677999999999999999999999999999999999999999999999999999888 788999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHH-----HhhhhhhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCC
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCF-----IAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNK 176 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~-----~~g~~~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~ 176 (483)
..|+.+.|.+|+| -+.++++++....+|...+. +.....+||....+=+.++++. ...++|...|. +
T Consensus 119 LLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allA--l~~WlPq~~r~-----~ 190 (395)
T COG2807 119 LLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLA--LLIWLPQALRE-----Q 190 (395)
T ss_pred hhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHH--HHHHhhhcccc-----c
Confidence 9999999999866 45666666666666543332 3333446887654422222222 23445543211 0
Q ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhc
Q psy6142 177 QKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256 (483)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (483)
.+. .+....+...++|.+.-....+.+ -+|.... ++...+
T Consensus 191 ~~~--------------------------------~~~~~~~~~~vw~~~~aW~vtLfm---GlqS~~~-----Y~~~~W 230 (395)
T COG2807 191 AAS--------------------------------IATKLVSVRKVWRSPLAWQVTLFM---GLQSLLY-----YIVIGW 230 (395)
T ss_pred ccc--------------------------------cccccccccccccCchhHHHHHHH---HhhHHHH-----HHHHHH
Confidence 000 000011112344433222222222 2222211 111111
Q ss_pred cccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhccc-chHHHHHHhHHH
Q psy6142 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLG-RKILLYISSTAM 335 (483)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~G-Rr~~l~~~~~~~ 335 (483)
+ |.+ ..+.+.+..+++..-....++.++.++....+++|.. +|+..+...+++
T Consensus 231 L----------------P~i----------li~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~ 284 (395)
T COG2807 231 L----------------PAI----------LIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM 284 (395)
T ss_pred H----------------HHH----------HHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 1 111 1111222334455666777889999999999999754 455544444333
Q ss_pred HHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhh-cccCCccchhhhhHHHHHHHHHHHHHHH
Q psy6142 336 ILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMM-GEILPAKIRGSAASLATAFNWTCTFIVT 413 (483)
Q Consensus 336 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~-~Ei~P~~~R~~~~s~~~~~~~~~~~~~~ 413 (483)
.+.. +++.+.... ......+ .+|++.|.. ++.-..+ -..-.++.-+...+++..++.+...+++
T Consensus 285 l~G~--~G~~~~P~~----------~~~lw~~--llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP 350 (395)
T COG2807 285 LVGL--VGLLLAPGQ----------LPILWAL--LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGP 350 (395)
T ss_pred HHHH--HHHHHhhhh----------HHHHHHH--HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhh
Confidence 3333 222221111 1122222 233333321 2222222 2334466667777888888999999999
Q ss_pred HHHHHHHHHhC-cchhHHHHHHHHHHHHH
Q psy6142 414 KTFNDLTALLG-THGAFWLFGVVCLVGLF 441 (483)
Q Consensus 414 ~~~~~~~~~~g-~~~~f~i~~~~~~i~~i 441 (483)
.+++.+.+..| |+.+.+.++.+.+...+
T Consensus 351 ~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 351 WLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred hhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 99999988876 44444444444444333
No 110
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=3.5e-10 Score=108.58 Aligned_cols=349 Identities=17% Similarity=0.165 Sum_probs=194.3
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhh-HHHHHHHHHHHhhcc---HHHHHHHHHHhhhcccccccc
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTG-LPFIVSFLLIALANG---VPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~-~l~~~~~~l~~~a~~---~~~l~~~R~l~G~~~g~~~~~ 102 (483)
++.-.+...++..+-.++-+++.|..+|..|+||.++... .+-+++.++..++++ ++..++.=.+..++..+..+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3344566777788888899999999999999888766444 555666666777665 445577778888888899999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-------h---------------hhhhhHHHHHHhhHHH-HHHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-------G---------------TFLNWYQLAFFGACIP-VPFLI 159 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-------g---------------~~~~w~~~~~~~~~~~-~~~~~ 159 (483)
..++..+..+++.-++.....-...-+|..+..+. + ...+-|....+.+.+- +..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 99999999998877765433222222221111111 1 0112344444433332 33344
Q ss_pred HHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHHHH
Q psy6142 160 CMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMF 239 (483)
Q Consensus 160 ~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (483)
+++.+|+-++ .+..+++... .-+.++. +.+++.+.++.+....+..
T Consensus 216 m~~~v~~~~~-----~~~~~~~~l~-----------~g~k~L~------------------~t~k~i~~~~~i~~FLiA~ 261 (438)
T COG2270 216 MILNVHDAEK-----ISSPPPTALR-----------NGFKELK------------------STFKEIRGRKNLVLFLIAR 261 (438)
T ss_pred HHhccccccc-----ccccchHHHH-----------HHHHHHH------------------HHHHHHhcccchHHHHHHH
Confidence 5555655443 1000000000 0011111 1111111222222222222
Q ss_pred HHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhh
Q psy6142 240 FQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALI 319 (483)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lv 319 (483)
+--..|++.++..... ++. .....++.+-....+..+++.++++++.+++.
T Consensus 262 ~~~~DGv~til~~~~~-fg~----------------------------~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld 312 (438)
T COG2270 262 FFYIDGVNTILAMGGV-FGA----------------------------ADLGLSSTELLLIGIALSVVAALGAIIAGFLD 312 (438)
T ss_pred HHHHhhHHHHHHHHHH-HHH----------------------------HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333466655542111 100 00011122334567778899999999999999
Q ss_pred hcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhhhcccCCccchhhhh
Q psy6142 320 DRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLMMGEILPAKIRGSAA 398 (483)
Q Consensus 320 dr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~Ei~P~~~R~~~~ 398 (483)
||+|-|++++.+.+...+..+- ..+. .. .....+...+ .|...|. .+..-.|.+++.|++.-+...
T Consensus 313 ~rfg~k~vl~~~lvi~~~~~~~--~~~~-~~--------~~~f~i~gll--~g~s~G~~qA~SRSy~~~lvp~~k~~~fF 379 (438)
T COG2270 313 ERFGSKPVLMIGLVILSIAALY--LIFL-EG--------ELDFWILGLL--VGTSLGGAQASSRSYLARLVPKGKEGRFF 379 (438)
T ss_pred HHhCCceeehHHHHHHHHHHHH--HHHc-cc--------cHHHHHHHHH--HHHhcchHHHHHHHHHHHhCCCcccccee
Confidence 9999999988886544433321 1111 11 0111222121 3333343 345567899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-chhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 399 SLATAFNWTCTFIVTKTFNDLTALLGT-HGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 399 s~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
|+.+.+++...+.++.++....+.-|- +..+....+...++++ .++..|+.++
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~-~L~~v~~~~~ 433 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL-LLLRVKVPGR 433 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh-hEEeecCCCC
Confidence 999999999999999998887776553 2223333344444433 3445555433
No 111
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.36 E-value=2.5e-12 Score=108.05 Aligned_cols=132 Identities=27% Similarity=0.376 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCc
Q psy6142 36 SLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEV 115 (483)
Q Consensus 36 s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~ 115 (483)
+.+.++..++.++.|++.||+|||+.+..+..+..++.++..++++++.+.+.+++.|++.+...+....++.|..|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHHH-HHhcCcCC
Q psy6142 116 RGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFLI-CMFLIPET 167 (483)
Q Consensus 116 Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~~-~~~~~pES 167 (483)
|++..+.......+|...++..+. ..+|+..+.+.....+...+ ..++.||+
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999988888777777655544333 23577766665554443333 33445653
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.33 E-value=3.9e-09 Score=104.48 Aligned_cols=111 Identities=16% Similarity=0.178 Sum_probs=81.5
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhh----ccchhHHHH-HhhHHHHHHHHHHHhhcc------HHHHHHHHHH
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIE----SLGRRTTIL-STGLPFIVSFLLIALANG------VPMILAGRCV 91 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D----~~GRr~~l~-~~~~l~~~~~~l~~~a~~------~~~l~~~R~l 91 (483)
..+++....+.+-.+.=+--++.-|+.|.+.| |+||+|.++ ++...+++...++-.+++ .....+--.+
T Consensus 42 v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l 121 (467)
T COG2211 42 VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYML 121 (467)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHH
Confidence 34455544444444444555678899999999 589998865 455888899999988885 3355677778
Q ss_pred hhhcccccccchhhhhcccCC-CCccchhchHhHHHHHHHHHH
Q psy6142 92 AGFCVGIASLALPVYLGETVQ-PEVRGTLGLLPTFLGNIGILT 133 (483)
Q Consensus 92 ~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~g~~~ 133 (483)
.+++.........++..|+.+ +++|.+..+.-+.+..+|.++
T Consensus 122 ~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l 164 (467)
T COG2211 122 LGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL 164 (467)
T ss_pred HHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888888875 467888888888888887443
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.29 E-value=5.9e-10 Score=109.12 Aligned_cols=142 Identities=13% Similarity=0.206 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 378 (483)
+......+.+++...++.++++|+|.|+.++++..++.+=+...+.. +..+.....=.+....+++..
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-----------~~~~~i~~~klLH~~e~~l~l- 330 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-----------TNPWVISLIKLLHALEFPLLL- 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-------------SHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-----------cchHHHHHHHHHHHHHHHHHH-
Confidence 44555567889999999999999999999988766555443332211 111222211122222222221
Q ss_pred chhhhhhcccCCccchhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 379 SIPWLMMGEILPAKIRGSAASLATA-FNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 379 ~~~~~~~~Ei~P~~~R~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
....-|+++.+|++..++...+... ...++..+.+...+.+.+..|.+.+|++.+.+.+...+++.+.++..++
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 1123588899999999999988644 3457777788888999999999889999988888777777776655443
No 114
>KOG4686|consensus
Probab=99.21 E-value=4e-10 Score=101.79 Aligned_cols=109 Identities=19% Similarity=0.173 Sum_probs=85.9
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHhhHHHHHHHHHHHh---hccHHHHHHHHHHhhhccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIE-SLGRRTTILSTGLPFIVSFLLIAL---ANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D-~~GRr~~l~~~~~l~~~~~~l~~~---a~~~~~l~~~R~l~G~~~g 97 (483)
+|..++..+..++-|.|..=..+-++++|++.| |+|-|..-++-+....+|-++.+. ++.+|++..+||+-|+|.-
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 466777888888999999999999999999999 467666555544444556655544 6789999999999999999
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHH
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIG 130 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g 130 (483)
...+....|+.-++..|+-+....++....-+|
T Consensus 152 SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~G 184 (459)
T KOG4686|consen 152 SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLG 184 (459)
T ss_pred hhhhhhcceeEEEecCccccchhhHHHHHHHhh
Confidence 999999999998888888887666655554444
No 115
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.21 E-value=7.5e-11 Score=124.91 Aligned_cols=137 Identities=18% Similarity=0.154 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccC
Q psy6142 32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETV 111 (483)
Q Consensus 32 ~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~ 111 (483)
.+...+..++.++|.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|+..++..+...+++.|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34455677999999999999999999999999999999999999999999888999999999988888899999999999
Q ss_pred CCCccchhchHhHHHHHHHHHHHHHhhh-hhhh--HHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 112 QPEVRGTLGLLPTFLGNIGILTCFIAGT-FLNW--YQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 112 p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-~~~w--~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
|.+.|++..++......+|.++++.++. .... ...+.+.++..++..++..++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999988888888888777766543 3322 3344444445555555566779874
No 116
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=1.4e-08 Score=97.91 Aligned_cols=63 Identities=16% Similarity=0.074 Sum_probs=55.8
Q ss_pred HhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 77 ALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 77 ~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
+...+++.++++=|+.|.|.+...+..+.|+.+.-|+|++.+..++.+.+..+|.+++++++.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~ 67 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGG 67 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 355789999999999999999999999999999999999999999999999988777766544
No 117
>KOG2563|consensus
Probab=99.16 E-value=1e-08 Score=99.08 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=90.6
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc------cHH--HHHHHHHHhhhcccc
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN------GVP--MILAGRCVAGFCVGI 98 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~------~~~--~l~~~R~l~G~~~g~ 98 (483)
+.....|+.-+|.+-...-.+..-|+.|++|=|.+.+++..+..+|..+-..+. .++ ..+.+..+.+.+--.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 556677888889988888889999999999999999999999999999887763 334 667888888887666
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
....-.-+..-++|+++|..+++...+...+|...+.++..
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 66555555667899999999988888777777766665543
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.05 E-value=8.8e-08 Score=94.32 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=98.0
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHhhHHHHHHHHHHHhhc--cHHHHHHHHHHhhhcccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESL-GRRTTILSTGLPFIVSFLLIALAN--GVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l~~~~~l~~~~~~l~~~a~--~~~~l~~~R~l~G~~~g~~~ 100 (483)
...++.++.-+.+.|..=.-+-..++||++||+ |+|+++..+.+++.+|-++.+.+. +...+.++=.+.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 446677777777777777778889999999987 999999999999999999999984 78899999999999999999
Q ss_pred cchhhhhcccCCCCccchh--chHhHHH----HHHHHHHHHHhhhhhhhHHHHHHhhH
Q psy6142 101 LALPVYLGETVQPEVRGTL--GLLPTFL----GNIGILTCFIAGTFLNWYQLAFFGAC 152 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~--~~~~~~~----~~~g~~~~~~~g~~~~w~~~~~~~~~ 152 (483)
++..+++.|..|++...+= -++.-.. ..+++++....+...+|...+-.+..
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aav 193 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAV 193 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 9999999999987754441 1222222 33334444445555677776655444
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.04 E-value=7.9e-10 Score=111.59 Aligned_cols=130 Identities=14% Similarity=0.162 Sum_probs=101.0
Q ss_pred cccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhh
Q psy6142 26 INYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPV 105 (483)
Q Consensus 26 ~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~ 105 (483)
.+..+.+++.++..++..++.++.|++.||+|||+.+..+.++..++.++.++++|.+.+.+.+++.|++.+...+....
T Consensus 259 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 259 QGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677788888888999999999999999999999999999999999999999999999999999998888788888
Q ss_pred hhcccCCCCccchhchH-hHHHHHHHHHH-HHHhhhh---hhhHHHHHHhhHHHH
Q psy6142 106 YLGETVQPEVRGTLGLL-PTFLGNIGILT-CFIAGTF---LNWYQLAFFGACIPV 155 (483)
Q Consensus 106 ~i~E~~p~~~Rg~~~~~-~~~~~~~g~~~-~~~~g~~---~~w~~~~~~~~~~~~ 155 (483)
++.|..|++.|+..... .+....+|..+ +.+.|.. .+|+..+.......+
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~ 393 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVL 393 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHH
Confidence 99999999999875432 34444444433 3333433 367777766454443
No 120
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.02 E-value=2.9e-09 Score=106.47 Aligned_cols=142 Identities=13% Similarity=0.190 Sum_probs=103.2
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
++.+..+.++..+...++..++.++.|+++||+|||+.+..+.+...+......++++.+.+++.|++.+++.|......
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677777777777778899999999999999998887776666555555567888888899999999888777777
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh----hhhhhHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG----TFLNWYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
..+..|..|++ ||+..++.+....+|..+++.++ ...+|+..+.....+.++.++..+++||
T Consensus 327 ~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88889999864 88877766665566554444333 2346777776666555555666666664
No 121
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.97 E-value=4.1e-09 Score=103.02 Aligned_cols=138 Identities=26% Similarity=0.348 Sum_probs=116.7
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhH-HHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRT-TILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~-~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
+.+..+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+...+.++.+.+.+..++.|++.+...+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhH
Confidence 567788899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh-hh---hhhHHHHHHhhHHHHHHHHHHh
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG-TF---LNWYQLAFFGACIPVPFLICMF 162 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g-~~---~~w~~~~~~~~~~~~~~~~~~~ 162 (483)
..++.|..|+++|++..+..+....+|..+++.+. .. .+|+..+.+...+.+...+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999998888888887765554443 32 3567766665555554444433
No 122
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.95 E-value=1.7e-08 Score=100.22 Aligned_cols=144 Identities=15% Similarity=0.043 Sum_probs=101.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..+......++..++.++.+++.||+|||+.+..+.+...++........ ..+...+..++ .+.+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l--~g~~~ 96 (399)
T TIGR00893 30 QYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-----------AYVSLYILRVL--LGAAE 96 (399)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc-----------CHHHHHHHHHH--HHHHH
Confidence 345667777888999999999999999999998887665554443332210 11223333333 33333
Q ss_pred cc-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 376 GF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 376 g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
+. .+....+..|.+|++.|+++.++......++..+++.....+.+..+|++.|++.+++.++..+..+++.||++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 32 244456888999999999999999888888888888777777777789999988877777666655566677644
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.93 E-value=2.2e-08 Score=83.81 Aligned_cols=133 Identities=22% Similarity=0.311 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhh
Q psy6142 305 GVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWL 383 (483)
Q Consensus 305 ~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~ 383 (483)
.++.+++.++.+++.||+|||+.+..+.....++...... .. ..+...+..+ ..+.+.+. .+....
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~--~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL----SS-------NITVLIIARF--LQGFGAAFALVAGAA 74 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH----hc-------cHHHHHHHHH--HHHHHHHHHHHhHHH
Confidence 4667889999999999999999988776555544433221 11 1122222222 23333332 244556
Q ss_pred hhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 384 MMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 384 ~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
+..|.+|++.|+++.++......++..+.+...+.+.+..++++.+++.+.+..++.+..+++.|||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 7889999999999999999988888888887777777777788888888877777766666666664
No 124
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.93 E-value=6.8e-09 Score=106.29 Aligned_cols=120 Identities=19% Similarity=0.136 Sum_probs=86.7
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHH--HHhhccHHHHHHHHHHhhhcccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLL--IALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l--~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
+++.+..+.++..+.+.++..+|.+++|+++||+|||+.+.....+..++..+ ....++...+.+.+++.|+...+..
T Consensus 288 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 367 (467)
T PRK09556 288 ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQ 367 (467)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHH
Confidence 35567777888888899999999999999999999999877655444433322 2234566677788999997655544
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHH-H-HHHHHHhhhhhh
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNI-G-ILTCFIAGTFLN 142 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~-g-~~~~~~~g~~~~ 142 (483)
.....+..|..|++.||...++......+ | .+.+.+.|...+
T Consensus 368 ~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 368 LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 44446777999999999998888777664 4 455555555544
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.92 E-value=6.2e-09 Score=104.85 Aligned_cols=139 Identities=19% Similarity=0.281 Sum_probs=105.0
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc----cHHHHHHHHHHhhhcccccccchh
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN----GVPMILAGRCVAGFCVGIASLALP 104 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~----~~~~l~~~R~l~G~~~g~~~~~~~ 104 (483)
...+...++..++..++.++.|+++||+|||+++..+.++..++..+...+. +++.+.+.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446777778888899999999999999999999999999988877776642 245678899999999998888889
Q ss_pred hhhcccCCCCccchhchHhH-HHHHHHHHHHHHh-hhh---------hhhHHHHHHhhHHH-HHHHHHHhcCcCC
Q psy6142 105 VYLGETVQPEVRGTLGLLPT-FLGNIGILTCFIA-GTF---------LNWYQLAFFGACIP-VPFLICMFLIPET 167 (483)
Q Consensus 105 ~~i~E~~p~~~Rg~~~~~~~-~~~~~g~~~~~~~-g~~---------~~w~~~~~~~~~~~-~~~~~~~~~~pES 167 (483)
.++.|..|+++||+..++.+ ....+|..+++.+ |.. .+|+..+.....+. +..++..+++|||
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999887775 4555565444333 322 24777666655544 3344455667876
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.91 E-value=9.2e-09 Score=103.28 Aligned_cols=119 Identities=21% Similarity=0.213 Sum_probs=98.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+.+.+..+.++..+.+.++..+|.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.|++.++..+.
T Consensus 249 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 328 (406)
T PRK11551 249 GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSV 328 (406)
T ss_pred hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHH
Confidence 34566677788888899999999999999999999999999877777777777777888888888889999988888888
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHH-hhhhh
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI-AGTFL 141 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~-~g~~~ 141 (483)
...++.|..|+++||+..++.+....+|..+++. .|...
T Consensus 329 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 329 LYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred HHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 8899999999999999888887777777655544 34443
No 127
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.91 E-value=4e-08 Score=101.59 Aligned_cols=145 Identities=19% Similarity=0.140 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++.+++.++.+++.||+|||+.+..+.++..++....+.. .. . .+ ...........+..|++.|.
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~--~~-~--~~--~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS--PG-S--SP--KSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--cC-c--cc--chHHHHHHHHHHHHHHHHhh
Confidence 456777788899999999999999999999988766665554433221 11 0 00 00011223333444555554
Q ss_pred c-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------HhCcchhHHHHH
Q psy6142 378 G-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA-----------------------LLGTHGAFWLFG 433 (483)
Q Consensus 378 ~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~-----------------------~~g~~~~f~i~~ 433 (483)
. +....+..|.+|++.|+++.++......++..++..+...... ..+|+..+.+.+
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ 211 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGA 211 (502)
T ss_pred hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHH
Confidence 2 4556899999999999999999887776666555543322211 126887886666
Q ss_pred HHHHHHHHHhhhhcccC
Q psy6142 434 VVCLVGLFFVIIFVPET 450 (483)
Q Consensus 434 ~~~~i~~i~~~~~lpet 450 (483)
+.+++..+ ..+++||+
T Consensus 212 ip~~i~~~-~~~~lpES 227 (502)
T TIGR00887 212 VPALLALY-FRLTIPET 227 (502)
T ss_pred HHHHHHHH-HHHhCCCC
Confidence 55555433 34678998
No 128
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.90 E-value=6.7e-08 Score=99.13 Aligned_cols=140 Identities=14% Similarity=0.073 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.+..+.+...++....+. .. ..+...+.. +..|++.+.
T Consensus 74 g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~----~~-------s~~~l~~~r--~l~G~~~~~ 140 (476)
T PLN00028 74 GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL----VS-------SATGFIAVR--FFIGFSLAT 140 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH----hc-------CHHHHHHHH--HHHHHHHHh
Confidence 34455556778889999999999999999887776555544332221 11 011222222 233333332
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---------HhCcchhHHHHHHHHHHHHHHhhhhcc
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA---------LLGTHGAFWLFGVVCLVGLFFVIIFVP 448 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~f~i~~~~~~i~~i~~~~~lp 448 (483)
......+++|.+|++.|+.+.++....+.++..+.....+.+.. ..||+++|++.++++++..+..+++.+
T Consensus 141 ~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 141 FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22233467899999999999999877666666655544433221 147899999888887776555544443
Q ss_pred cC
Q psy6142 449 ET 450 (483)
Q Consensus 449 et 450 (483)
+.
T Consensus 221 ~~ 222 (476)
T PLN00028 221 DL 222 (476)
T ss_pred cC
Confidence 33
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.90 E-value=6.4e-08 Score=97.41 Aligned_cols=143 Identities=10% Similarity=-0.034 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.+..+++.||+|||+.+..+.++..++....+.. . ..+...+.- +..|++.+
T Consensus 45 ~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----~-------~~~~l~~~r--~l~G~~~~ 111 (412)
T TIGR02332 45 FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA----T-------GPESLYLLR--ILVGIAEA 111 (412)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh----c-------CHHHHHHHH--HHHHHHHh
Confidence 3455666677788889999999999999999887766555544433211 1 012222222 23344444
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH------HhCcchhHHHHHHHHHHHHHHhhhhccc
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA------LLGTHGAFWLFGVVCLVGLFFVIIFVPE 449 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~f~i~~~~~~i~~i~~~~~lpe 449 (483)
.. +....+..|.+|++.|+++.++.......+..+.+.....+.. ..||+++|++.++..++..++.++++||
T Consensus 112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 32 3344577899999999999999887776777666665554442 3589999998877776665666677888
Q ss_pred CCC
Q psy6142 450 TQG 452 (483)
Q Consensus 450 t~~ 452 (483)
+..
T Consensus 192 ~p~ 194 (412)
T TIGR02332 192 SPD 194 (412)
T ss_pred Ccc
Confidence 764
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.89 E-value=9.6e-09 Score=101.54 Aligned_cols=130 Identities=11% Similarity=-0.021 Sum_probs=103.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccH--HHHHHHHHHhhhccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGV--PMILAGRCVAGFCVGIA 99 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~--~~l~~~R~l~G~~~g~~ 99 (483)
++.+.+..+.++..+.+.++..++.++.|+++||+|||+.+.++..+..++.++..+.++. ..+....++.|++.|..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 312 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT 312 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc
Confidence 3455666677888889999999999999999999999999999999988888888777753 34556788999999988
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhh---hhhHHHHHHhh
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTF---LNWYQLAFFGA 151 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~---~~w~~~~~~~~ 151 (483)
.+..+.++.|..|+++|++..++......+|..+++.+ +.. .+|+..+.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~ 368 (377)
T TIGR00890 313 ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTG 368 (377)
T ss_pred hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Confidence 88888999999999999998888877777776555443 332 35666655433
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.89 E-value=1.3e-08 Score=102.00 Aligned_cols=136 Identities=23% Similarity=0.210 Sum_probs=106.1
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcc
Q psy6142 30 QASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGE 109 (483)
Q Consensus 30 ~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E 109 (483)
+.++..+.+.++..+|.++.|++.||+|||+.+..+..+..++.++..+.++.+.+.+++++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556667888899999999999999999999999988888888888888998888999999999999888887888889
Q ss_pred cCCCCccchhchHhHHHHHHHH-HHHHHhhhhh---hhHHHHHHhhHHHHHHHHHHhcCc
Q psy6142 110 TVQPEVRGTLGLLPTFLGNIGI-LTCFIAGTFL---NWYQLAFFGACIPVPFLICMFLIP 165 (483)
Q Consensus 110 ~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g~~~---~w~~~~~~~~~~~~~~~~~~~~~p 165 (483)
..|+++||+..++......+|. +.+.+.|... +|+..+.......++.++...+++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999998888777776664 3344444443 567766665555544444444443
No 132
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.86 E-value=5.9e-08 Score=96.98 Aligned_cols=143 Identities=14% Similarity=0.168 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.++.+.+...++...... .. ..+...... +..+.+.+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~-----~~------~~~~~~~~~--~l~g~~~~~ 107 (392)
T PRK10473 41 HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL-----AE------TSSLFLAGR--FLQGIGAGC 107 (392)
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-----hC------cHHHHHHHH--HHHHhhhhH
Confidence 34555556777888999999999999999998876655544433221 10 011222222 223333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
.+..+.+..|.+|++.|+++.++......++..+.+.....+.+..+|++.|++.+++.++..+..++++||++.+
T Consensus 108 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 108 CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 2345567889999999999999988877777666666655555667888888888887777766666777887543
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.86 E-value=1.6e-08 Score=100.31 Aligned_cols=142 Identities=18% Similarity=0.231 Sum_probs=102.9
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
.+.+..+.++..+.......++.++.|++.||+|||+.+..+.+...++.++..+.++.+.+.+.+++.|++.|...+..
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777766666777888999999999999999988877766666666677888888899999999999888888
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhh---hhhHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTF---LNWYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~---~~w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
..++.|..|++ |+...++......+|..+++.+ +.. .+|+..+.......+...+...+++|
T Consensus 310 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 310 MLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 88999999865 5576666666665665444433 332 35677776655555555555555543
No 134
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.86 E-value=4.6e-08 Score=100.51 Aligned_cols=153 Identities=18% Similarity=0.207 Sum_probs=93.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++.+++.++.+++.||+|||+.++.+.++..++....+........... ........+....+..|++.|
T Consensus 57 ~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~R~l~G~~~g 135 (479)
T PRK10077 57 LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP-DNTGYVPEFVIYRIIGGIGVG 135 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccc-cchhHHHHHHHHHHHHhhhHh
Confidence 4566677788899999999999999999999988877665544433221100000000 001111122233333444444
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH--------HHHhCcchhHHHHHHHHHHHHHHhhhhc
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDL--------TALLGTHGAFWLFGVVCLVGLFFVIIFV 447 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~~f~i~~~~~~i~~i~~~~~l 447 (483)
.. +....+++|.+|++.|++++++.......+..+.+...... ....||+++|++.++..++..+ ..+++
T Consensus 136 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l 214 (479)
T PRK10077 136 LASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFV 214 (479)
T ss_pred HHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcC
Confidence 32 44557889999999999999998776655555543322211 1235788898877666666544 45678
Q ss_pred ccCC
Q psy6142 448 PETQ 451 (483)
Q Consensus 448 pet~ 451 (483)
||+.
T Consensus 215 ~~s~ 218 (479)
T PRK10077 215 PETP 218 (479)
T ss_pred CCCc
Confidence 9974
No 135
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.85 E-value=5.3e-08 Score=96.24 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.+..|++.||+|||+++.........+.. ... ... . ........+..|.+.+.
T Consensus 29 g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~---~~~--~~~-------~-~~~l~~~R~l~G~g~~~ 95 (368)
T TIGR00903 29 GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG---RLL--DPF-------N-YEWLLACQLLAALGQPF 95 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH---HHH--Hhc-------c-HHHHHHHHHHHHhHhHH
Confidence 4555566777889999999999999999876544322222111 011 100 0 12223333444555543
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
........+|.+|++.|+++.++......++..+.+.....+.+..||++.|++.+++.++..++.++++||+..
T Consensus 96 ~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 96 LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 333445568999999999999999888888888888777777777899999988888877776767778898643
No 136
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.85 E-value=8.5e-08 Score=95.32 Aligned_cols=144 Identities=16% Similarity=0.116 Sum_probs=100.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.++.+.+...++....... . ..+...+. .+..+.+.+
T Consensus 42 ~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~--~~l~g~~~~ 108 (385)
T TIGR00710 42 VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS----N-------NIETLLVL--RFVQAFGAS 108 (385)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH----c-------cHHHHHHH--HHHHHcchh
Confidence 4556666778888999999999999999999988766555544433211 0 01122222 223333333
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
.. +....+..|.+|++.|++..++......++..+++...+.+.+..+|+.++++.+++.++..+..+++.||++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22 334467789999999999999998888888888877777777777899888888877777666666677887543
No 137
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.84 E-value=5.1e-08 Score=98.14 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.++.+.++..++...... .+ ..+..++.-+ ..|.+.+.
T Consensus 54 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~------~~~~l~~~r~--l~Gi~~~~ 120 (413)
T PRK15403 54 PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-----TT------SMTQFLIARF--IQGTSICF 120 (413)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-----cC------CHHHHHHHHH--HHHHHHHH
Confidence 34445556777888999999999999999998876555444432221 11 1122222222 33333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
.+..+.+..|.+|++.|+++.++......++..+++.....+.+..||++.|++.+++.+++.+..++.+||++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 234456788999999999999988887777777777666666777799999998888877776655566899754
No 138
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=9e-08 Score=92.97 Aligned_cols=150 Identities=19% Similarity=0.173 Sum_probs=112.9
Q ss_pred hhhhhhCCCC-chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHH
Q psy6142 286 TEEEDAGSTI-NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLL 364 (483)
Q Consensus 286 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 364 (483)
...++.+.+. ...+.....+++..++.++...+.||+.||++++....+..++........ .....
T Consensus 38 ~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp-------------~f~~L 104 (394)
T COG2814 38 PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP-------------SFAVL 104 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc-------------cHHHH
Confidence 3444444333 356777777889999999999999999999999888777666665443321 12334
Q ss_pred HHHHHHHHHhccc-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 365 SFVVYVIGFSIGF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 365 ~~~l~~~~~~~g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.......++.+|. .++...+..++.|++.|++++++...-..+...++..+...+-+..||+.+|++.+.+++++++..
T Consensus 105 l~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~ 184 (394)
T COG2814 105 LLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLL 184 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 4445566666664 467778889999999999999998776656666666666778888999999999999999988888
Q ss_pred hhhcc
Q psy6142 444 IIFVP 448 (483)
Q Consensus 444 ~~~lp 448 (483)
+..+|
T Consensus 185 ~~~lP 189 (394)
T COG2814 185 WKLLP 189 (394)
T ss_pred HHhCC
Confidence 88889
No 139
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.82 E-value=8.4e-08 Score=95.93 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+.+.||+|||+.+..+.++..++....... . ..+...+.-++ .+.+.+.
T Consensus 58 g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~--------~~~~l~~~r~l--~G~~~g~ 124 (394)
T PRK10213 58 GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA---N--------SFSLLLIGRAC--LGLALGG 124 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH---C--------hHHHHHHHHHH--HHHhhHH
Confidence 444556677788899999999999999999988877666544333211 1 11222332222 3333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
.+....++.|.+|++.|+.+.++......++..+++...+.+.+..||++.|++.+++++++.+......||++
T Consensus 125 ~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 125 FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 24445677899999999999999888777888888888887888889999998877766665544444567754
No 140
>TIGR00895 2A0115 benzoate transport.
Probab=98.82 E-value=1.2e-07 Score=94.49 Aligned_cols=141 Identities=19% Similarity=0.174 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++.+++.++.+++.||+|||+.+..+.+...++...... .. ..+...+. .+..+++.+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~--~~~~g~~~~~ 121 (398)
T TIGR00895 55 GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL----AT-------NVTQLLIL--RFLAGLGLGG 121 (398)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH----cc-------chHHHHHH--HHHHhccccc
Confidence 45556667788899999999999999999988876655544433221 11 11222222 2333343332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
.+....+..|.+|++.|+++.++......++..+++...+.+.+..+|+..+++.+++..+..++...++||+.
T Consensus 122 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 122 LMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred chhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 23445788899999999999999988888888888877777777778888888876666665565666778864
No 141
>KOG2325|consensus
Probab=98.81 E-value=6.9e-08 Score=95.97 Aligned_cols=116 Identities=19% Similarity=0.106 Sum_probs=92.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccch-hHHHHHhhHHHHHHHHHH-Hh---hc-cHHHHHHHHHHhhhcc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGR-RTTILSTGLPFIVSFLLI-AL---AN-GVPMILAGRCVAGFCV 96 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GR-r~~l~~~~~l~~~~~~l~-~~---a~-~~~~l~~~R~l~G~~~ 96 (483)
|..-+....||+.++..+|.+++++.+|+=+.|.|+ |+.++.+.++..+|.++- ++ ++ .-+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 455666788999999999999999999999999997 888888999999988876 33 23 4678999999999997
Q ss_pred cccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 97 GIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 97 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
|.. .....|++...-.+.|.++.+..+.+..+|...++.++.
T Consensus 145 ~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 145 GNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred ccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 766 568899998777777777766666666666665555544
No 142
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.81 E-value=1.4e-07 Score=95.70 Aligned_cols=141 Identities=12% Similarity=0.103 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.+..+.+...++....... . ..+...+..++..++.+.+.
T Consensus 61 g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~-------~~~~l~~~~~l~g~~~g~~~ 129 (434)
T PRK11663 61 GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS----S-------SLWAFALLWVLNAFFQGWGW 129 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH----h-------HHHHHHHHHHHHHHHHHccc
Confidence 455666778888999999999999999999888876666555433221 0 01222222222233333332
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
+....+..|.+|++.|++++++......++..+.+...+.+.+..||++.|++.++++++..+...+++||+
T Consensus 130 -~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 130 -PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred -hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 334567789999999999999998888888888887777777778999999887776665444445566765
No 143
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.80 E-value=3.1e-08 Score=97.97 Aligned_cols=144 Identities=12% Similarity=0.116 Sum_probs=97.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..+......++..++.++.+++.||+|||+.++.+.++..++........ ..+...+. .+..+++.
T Consensus 31 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~~g~~~ 97 (379)
T TIGR00881 31 DLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST-----------SLWVMAAL--WALNGIFQ 97 (379)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-----------hHHHHHHH--HHHHHhhc
Confidence 345667777888899999999999999999999888766655544332210 11222222 23334444
Q ss_pred ccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 376 GFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTK-TFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 376 g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
+.. +....+..|.+|++.|+++.++......++..+++. .........+|++.|++.+++.++..+..+++.||++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 98 GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcc
Confidence 432 445568889999999999999888777777777763 44445555688888888777776655666666777543
No 144
>PRK10054 putative transporter; Provisional
Probab=98.80 E-value=2e-07 Score=93.24 Aligned_cols=141 Identities=17% Similarity=0.175 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.|++.||+|||+.+..+.+...++...... .. ..+.......+...+.+ .+
T Consensus 46 g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~g~~~~-~~ 113 (395)
T PRK10054 46 GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL----VN-------NVTLVVLFFALINCAYS-VF 113 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH----Hh-------HHHHHHHHHHHHHHHHH-HH
Confidence 44455556778888999999999999999887776554443332211 10 01122222222222222 12
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
.+....+..|.+|++.|+++.++......++..+++.+.+.+.. .+++.+|++.++++++..+...+++||.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445677899999999999999998888888888777766554 58888999887777776555555566654
No 145
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.79 E-value=7.1e-08 Score=99.52 Aligned_cols=145 Identities=19% Similarity=0.052 Sum_probs=98.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..|......++...+.+..|++.||+|||+.++.+.++..++....+.. + ..+..++.-.+.+++.+.
T Consensus 42 ~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a-----~------~~~~li~~r~l~G~g~~~ 110 (495)
T PRK14995 42 ELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS-----P------TASWLIATRALLAIGAAM 110 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc-----C------CHHHHHHHHHHHHHHHHH
Confidence 34566666777778888999999999999999988876665554433221 1 112223332333333222
Q ss_pred cccchhhhhhccc-CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 376 GFGSIPWLMMGEI-LPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 376 g~~~~~~~~~~Ei-~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
. .+.......+. .|++.|+++.++......++..+++...+.+.+..+|++.|++...++++..++..+++||.++
T Consensus 111 ~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 111 I-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred H-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 1 12222333344 4789999999999988888888888888888888899999998877777776666677787543
No 146
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.79 E-value=8.7e-06 Score=78.87 Aligned_cols=303 Identities=16% Similarity=0.108 Sum_probs=164.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccc-----hhHHHHHhhHHH-HHHHHHHHhh-----c-------cH-
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLG-----RRTTILSTGLPF-IVSFLLIALA-----N-------GV- 82 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~G-----Rr~~l~~~~~l~-~~~~~l~~~a-----~-------~~- 82 (483)
.|+.++.+-.+...++..+-.. -.+.+|+.||+++ ||..+++...+. ..+..+..++ . +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 3555666666666666555444 5889999999999 999988665444 3333333332 2 12
Q ss_pred -H--HHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhhhh----hHHHHHHhh--H
Q psy6142 83 -P--MILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTFLN----WYQLAFFGA--C 152 (483)
Q Consensus 83 -~--~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~~~----w~~~~~~~~--~ 152 (483)
+ ...+.=.+.|+|.+...+...+++.|..|+|+|++..++.-.....|++++.+. +..++ -|....+.. .
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 1 336667788999999999999999999999999998888777777776655443 33332 222222221 1
Q ss_pred HHHHHHHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHH
Q psy6142 153 IPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLL 232 (483)
Q Consensus 153 ~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (483)
+.+..-+...+=.|.+.--.. ....+. +.+-....+++..+++.++..
T Consensus 167 i~~~l~~ia~wg~E~r~~~~~---------------~~~~~~-----------------~~~f~~a~~~~~~~~~a~~f~ 214 (403)
T PF03209_consen 167 IALLLNLIALWGQEPRRSRRA---------------AAAERP-----------------RPPFREAWRQVWASPQARRFF 214 (403)
T ss_pred HHHHHHHHHHHhcccCCcccc---------------cCCCCC-----------------CccHHHHHHHHHhCCChhHHH
Confidence 222222222232332110000 000000 000011123333444444444
Q ss_pred HHHHHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCC-chhHHHHHHHHHHHHH
Q psy6142 233 ISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTI-NENYCTIIVGVVNLLS 311 (483)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (483)
..+++..+.. +.- ..-++|...+..+.+. +++..+-..+.+.+++
T Consensus 215 ~fl~l~t~a~-~~Q---------------------------------D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G 260 (403)
T PF03209_consen 215 VFLFLGTLAF-FMQ---------------------------------DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLG 260 (403)
T ss_pred HHHHHHHHHH-Hhh---------------------------------HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 3333322100 000 0112344444444443 4566778888888999
Q ss_pred HHHHHHhhh-cccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhh-hhhcccC
Q psy6142 312 VLIATALID-RLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPW-LMMGEIL 389 (483)
Q Consensus 312 ~~i~~~lvd-r~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~Ei~ 389 (483)
....+++.. |.++|+....|+.....+...+...-.. ...+.+.... +.+|++.|...+.. ..+-++.
T Consensus 261 ~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~--------~~~~~~~~~~--~l~G~g~G~f~vgals~mM~lt 330 (403)
T PF03209_consen 261 MLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL--------GSPWLFRPGV--FLLGLGNGLFTVGALSLMMDLT 330 (403)
T ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc--------ccchHHHHHH--HHHHHhhhHHHHHHHHHHHhCC
Confidence 888888777 6777887777777666665544322111 1123334334 44555555544332 3445777
Q ss_pred CccchhhhhHHH
Q psy6142 390 PAKIRGSAASLA 401 (483)
Q Consensus 390 P~~~R~~~~s~~ 401 (483)
++...|..+|.=
T Consensus 331 ~~~~aG~~mG~W 342 (403)
T PF03209_consen 331 SAGRAGLFMGAW 342 (403)
T ss_pred CCcchhHHHHHH
Confidence 777777777653
No 147
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.78 E-value=1e-07 Score=94.86 Aligned_cols=143 Identities=13% Similarity=0.087 Sum_probs=97.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.+..+.....++....+. .. ..+...+..+ ..|.+.+
T Consensus 40 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~----~~-------~~~~l~~~r~--l~G~~~~ 106 (382)
T PRK10091 40 AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL----SS-------SYLMLAIGRL--VSGFPHG 106 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH----hC-------cHHHHHHHHH--HHHhhhH
Confidence 356667778889999999999999999999998887666555443321 11 1122333332 3333333
Q ss_pred c-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 377 F-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 377 ~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
. .+....+..|.+|++.|+...++......++..+.+.....+.+..+|+++|++.+++.++..+..+.++||.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 107 AFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 2 233345677999999999999987776666666666665556666789999998888777666655667888643
No 148
>PRK03545 putative arabinose transporter; Provisional
Probab=98.78 E-value=1.4e-07 Score=94.22 Aligned_cols=141 Identities=19% Similarity=0.079 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.+..+++.||+|||+.+..+.+...++....... . ..+...+ .....+.+.+.
T Consensus 47 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~-------~~~~l~~--~r~~~G~~~~~ 113 (390)
T PRK03545 47 GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA----W-------NFTVLLI--SRIGIAFAHAI 113 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh----c-------cHHHHHH--HHHHHHHHHHH
Confidence 444555566777888889999999999999988866555554333211 0 1122222 22233333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
.+....+..|.+|++.|+++.++......++..+++.....+.+..||+++|++.++++++..+..+...||.+
T Consensus 114 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 114 FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 23444677899999999999999888777788777777777777789999999988887776665555667653
No 149
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.77 E-value=1.1e-07 Score=94.35 Aligned_cols=143 Identities=14% Similarity=0.164 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.+..+.....++....... . ..+...+.. +..+++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~----~-------~~~~~~~~~--~l~g~~~~ 94 (377)
T PRK11102 28 VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA----Q-------TIDQLIYMR--FLHGLAAA 94 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH----c-------cHHHHHHHH--HHHHHHHH
Confidence 3455666778888999999999999999999988876655554433211 1 112222222 22333333
Q ss_pred c-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 377 F-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 377 ~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
. .+....+..|.+|++.|++..++......++..+.+...+.+.+..+|++.|++.++++++..+...++.||++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 2 233456788999999999999999888888888887777777777789989988888777766666667788643
No 150
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.77 E-value=1.2e-07 Score=95.29 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.+..+.....++....... . ..+...+. .+..+.+.+.
T Consensus 51 ~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----~-------~~~~l~~~--~~l~G~~~~~ 117 (406)
T PRK15402 51 PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA----Q-------SIEQFTLL--RFLQGIGLCF 117 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH----c-------cHHHHHHH--HHHHHhHhhh
Confidence 344556677888999999999999999999888766555544332211 0 01222222 2223333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
.+..+.+..|.+|++.|..+.++.......+..+++.....+.+..+|+++|++.+++++++.+..+...||+++
T Consensus 118 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 118 IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 234556778999999999988887776666666666666666666789999998888877766656666788754
No 151
>KOG0254|consensus
Probab=98.76 E-value=1.7e-07 Score=97.14 Aligned_cols=138 Identities=24% Similarity=0.250 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++...+.++++++.|++|||+.++.+.+...++.+..+... . ...+.......|++.|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-----------~--~~~l~~GR~l~G~g~G~ 158 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-----------S--WYQLIVGRILTGLGVGG 158 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-----------h--HHHHHHHHHHhccchhh
Confidence 5788888999999999999999999999999888777776665544321 0 12233344455566665
Q ss_pred cc-hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH--hCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 378 GS-IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL--LGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 378 ~~-~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
.. +...|.+|+-|++.||...+.....-.++..+. +..+..... .+|+..+.+..+.+++..+. .+++||+
T Consensus 159 ~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 159 ASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred hhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 43 446899999999999999998776655444333 443333332 36787777777777776665 7788987
No 152
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.75 E-value=5.8e-08 Score=97.47 Aligned_cols=127 Identities=14% Similarity=0.125 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccC
Q psy6142 32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETV 111 (483)
Q Consensus 32 ~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~ 111 (483)
+.+.+++.++..++.+..|+++||+|||+.+..+.++..++.+...+.++.+.+.+.+++.|++.+...+....++.|..
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 34445566788889999999999999999999999888888888888888999999999999999999998889999999
Q ss_pred CCCccchhchHhHHHHHHHHHHHHHhhh----hhhhHHHHHHhhHHHHHHH
Q psy6142 112 QPEVRGTLGLLPTFLGNIGILTCFIAGT----FLNWYQLAFFGACIPVPFL 158 (483)
Q Consensus 112 p~~~Rg~~~~~~~~~~~~g~~~~~~~g~----~~~w~~~~~~~~~~~~~~~ 158 (483)
|+++||+..+.......+|..+++.++. ..+|+..+.......+...
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 391 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNA 391 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 9999999877776666666544444332 2367777766555544433
No 153
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.75 E-value=5.1e-08 Score=100.32 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.++.+.+...++....+. .+ ..+... ...+..|++.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~------~~~~l~--~~~~~~G~~~~ 105 (485)
T TIGR00711 39 VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-----AP------NLELMI--IFRVIQGFGGG 105 (485)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC-----cC------CHHHHH--HHHHHHHhhhh
Confidence 456777788899999999999999999999998886655554433221 11 112222 22233344433
Q ss_pred c-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 377 F-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 377 ~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
. .+....++.|.+|++.|+++.++......++..+++...+.+.+..+|++.|++.+.++++..+...++.||.+.+
T Consensus 106 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 106 PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc
Confidence 3 2445678889999999999999988888788888777777777777899999988777777666666677775443
No 154
>PRK12382 putative transporter; Provisional
Probab=98.75 E-value=5.1e-08 Score=97.45 Aligned_cols=128 Identities=21% Similarity=0.136 Sum_probs=101.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhccc
Q psy6142 31 ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGET 110 (483)
Q Consensus 31 ~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~ 110 (483)
.++..+.+.++..++.++.|++.||+||||.+..+..+..++.++..++++.+.+.+++++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 44555667788889999999999999999999999999999988888889998889999999999998888888888999
Q ss_pred CCCCccchhchHhHHHHHHHHHHHH-Hhhhh---hhhHHHHHHhhHHHHHHH
Q psy6142 111 VQPEVRGTLGLLPTFLGNIGILTCF-IAGTF---LNWYQLAFFGACIPVPFL 158 (483)
Q Consensus 111 ~p~~~Rg~~~~~~~~~~~~g~~~~~-~~g~~---~~w~~~~~~~~~~~~~~~ 158 (483)
.|+++||+..++.+....+|..+++ +.+.. .+|+..+.......+...
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGI 382 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 9999999988888777766654433 33433 357777666555444333
No 155
>PRK09952 shikimate transporter; Provisional
Probab=98.74 E-value=9.4e-08 Score=97.03 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh---hc-cHHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 33 WIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL---AN-GVPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 33 ~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~---a~-~~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
....+..+..+++.++.|+++||+|||+.++.+.++..++.+.... .. +...+.++-++.|++.+...+..+.++.
T Consensus 290 ~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 369 (438)
T PRK09952 290 NIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFT 369 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666788889999999999999998887766555443322 22 3445556677778888888888899999
Q ss_pred ccCCCCccchhchHh-HHHHHHH-HHHHHHhhhhh-----hhHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 109 ETVQPEVRGTLGLLP-TFLGNIG-ILTCFIAGTFL-----NWYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 109 E~~p~~~Rg~~~~~~-~~~~~~g-~~~~~~~g~~~-----~w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
|.+|++.|+...++. .....+| .+.+.+.+... +|...+.+.....++..+..+.++|
T Consensus 370 e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 370 EMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 999999998765553 3333333 44444444432 3555555544444544455555665
No 156
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.74 E-value=4e-08 Score=100.17 Aligned_cols=132 Identities=17% Similarity=0.118 Sum_probs=99.2
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhcc--chhHHHHH--hhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESL--GRRTTILS--TGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~--GRr~~l~~--~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~ 99 (483)
.+.+..+.++..++..++.+++.++.|+++||. ++|+...+ +..+..++.++..++++++.+.+.+++.|++.+..
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 455667778888888999999999999999973 34443333 33434455556677889999999999999999999
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhhh----hhHHHHHHhhHHHH
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTFL----NWYQLAFFGACIPV 155 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~~----~w~~~~~~~~~~~~ 155 (483)
.+....++.|..|++++|+..++.+....+|..+++.+ |... +|+..+++...+.+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 99999999999999999999888888888886655544 3332 36666666554443
No 157
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.73 E-value=7.7e-07 Score=90.75 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=89.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.|++.||+|||+.+..+.++..+......... .. ....+...+..++.+++.+..
T Consensus 65 ~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~--~~-----~~~~~~~~~~~~l~gi~~g~~ 137 (452)
T PRK11273 65 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVP--WA-----TSSIAVMFVLLFLCGWFQGMG 137 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhh--cc-----cccHHHHHHHHHHHHHHHhcc
Confidence 34566677788889999999999999999998888765555444332211 00 001112222223333333332
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH-HHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF-NDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
. +.......|.+|++.|+++.++......++..+.+... .......+|+++|++.++++++..++..+++||+.
T Consensus 138 ~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 138 W-PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred c-hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 2 22234567889999999999987666655543333322 22222347888998887777666566666778764
No 158
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.72 E-value=7.3e-07 Score=89.16 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.|++.||+|||+.++.+.+...++....... . ..+..+... +..|.+.+
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~----~-------~~~~l~~~~--~l~G~~~~ 115 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA----P-------GYITMFIAR--LVIGIGMG 115 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----c-------cHHHHHHHH--HHHHhhhh
Confidence 4566667778889999999999999999999988766555544333211 0 012222222 33333333
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG--THGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
.. +....++.|.+|++.|+++.++......++..+.+.....+.+..+ |++.|++.++..++. +......||++.
T Consensus 116 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~ 193 (405)
T TIGR00891 116 GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAED 193 (405)
T ss_pred hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 22 3345677899999999999999888777777777766666665555 777777655444443 334456788643
No 159
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.72 E-value=8.5e-08 Score=93.90 Aligned_cols=144 Identities=23% Similarity=0.286 Sum_probs=98.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..+......++..++.++.+++.||+|||+.+..+.+...++..... +. . ..+...+.. +..+.+.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~--~-------~~~~~~~~~--~l~g~~~ 99 (352)
T PF07690_consen 33 QIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA--S-------NFWLLLIAR--FLLGIGS 99 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH--C-------CHHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh--h-------hHHHHhhhc--ccccccc
Confidence 345666777788899999999999999999998888776666633222 11 1 112223333 3334433
Q ss_pred cc-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 376 GF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 376 g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
+. .+....++.|.+|++.|++..++......++..+++.....+.+..+|+++|++.++..++..++..++.++.+.
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---ST
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccc
Confidence 32 344557888999999999999999998888888887777766666778889999888888876654455555433
No 160
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.71 E-value=1e-07 Score=96.75 Aligned_cols=147 Identities=11% Similarity=0.032 Sum_probs=93.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.+..+.++..++........ .. ....+...+..++..++.+..
T Consensus 63 ~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~l~~~~~l~g~~~g~~ 135 (438)
T TIGR00712 63 LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVP--WA-----TSSIAIMFVLLFLNGWFQGMG 135 (438)
T ss_pred hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccc--cc-----cchHHHHHHHHHHHHHHhhcc
Confidence 35666677788889999999999999999988877655555443322110 00 001111222222222333322
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-HHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLT-ALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
. +....+..|.+|++.|+++.++......++..+.+....... ...+|+.+|++.++++++..+..+++.||+.
T Consensus 136 ~-~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 136 W-PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred h-HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 2 233456679999999999999988777677766665544333 3357899999888887776666666777754
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.70 E-value=3e-07 Score=90.45 Aligned_cols=138 Identities=18% Similarity=0.158 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.++.+.+...++........... + ...+...+..++ .+.+.+
T Consensus 36 ~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~l--~g~~~~ 107 (365)
T TIGR00900 36 LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG--G----LNIWQVYVLAGI--LAIAQA 107 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC--C----CcHHHHHHHHHH--HHHHHH
Confidence 34556666788889999999999999999999887665555444332221111 0 011222333332 333333
Q ss_pred c-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHH
Q psy6142 377 F-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFF 442 (483)
Q Consensus 377 ~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~ 442 (483)
. .+....+..|.+|++.|++..++......++..+++.....+.+..+|+++|++.++..+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 108 FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3 23445678899999999999999998888888888877777777788998888776666555443
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.70 E-value=2e-07 Score=95.27 Aligned_cols=145 Identities=21% Similarity=0.208 Sum_probs=93.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..+......++..++.++.+++.||+|||+.++.+.++..++....... ... ...+..++..+ ..+++.
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~r~--l~G~~~ 141 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AFA------LSVEMLIVGRV--LLGIGV 141 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--ccc------cchHHHHHHHH--HHHhhh
Confidence 34566777788899999999999999999999988766555544333211 000 01112222222 333333
Q ss_pred ccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH---HHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 376 GFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF---NDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 376 g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
+.. +....+++|.+|++.|+.+.++......++..+.+... .......+|+++|++.+...++. ++..+++||+.
T Consensus 142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~ 220 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESP 220 (481)
T ss_pred hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCh
Confidence 322 34457889999999999999998877777777766655 22223457888888855555444 34456778873
No 163
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.69 E-value=4.9e-08 Score=100.81 Aligned_cols=127 Identities=17% Similarity=0.026 Sum_probs=92.0
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh--ccHHHHHHHHHHhhhccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA--NGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a--~~~~~l~~~R~l~G~~~g~~ 99 (483)
++.+.+..+.+++.+.+.++..+|.++.|+++||+|||+.+..+.++..++.++.... .+.+.+.+..++.|....+.
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGI 383 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhccc
Confidence 3667788899999999999999999999999999999999998877766665544433 33445556666655544455
Q ss_pred ccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hh---hhhhHHHHH
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GT---FLNWYQLAF 148 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~---~~~w~~~~~ 148 (483)
.+..+.++.|.+|+++||+..++......+|..+++.+ |. ..+|+..+.
T Consensus 384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~ 436 (496)
T PRK03893 384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALA 436 (496)
T ss_pred chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHH
Confidence 56778899999999999998777666666655444333 33 234555443
No 164
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.69 E-value=4.7e-07 Score=89.39 Aligned_cols=143 Identities=16% Similarity=0.119 Sum_probs=88.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.++.+.+...++........ . ..+...+..+ ..+.+.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~--~--------~~~~~~~~~~--~~g~~~~ 106 (366)
T TIGR00886 39 LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV--Q--------SYSVLLLLRL--FIGIAGG 106 (366)
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh--h--------hHHHHHHHHH--HHHHhch
Confidence 34566777888899999999999999999999888776666554332210 0 1122222222 2333333
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH----------hCcchhHHH-HHHHHHHHHHHhhh
Q psy6142 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL----------LGTHGAFWL-FGVVCLVGLFFVII 445 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~f~i-~~~~~~i~~i~~~~ 445 (483)
.......+++|.+|++.|+++.++.......+..+.....+.+... .+|++.|++ .+++..+..++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 2233456778999999999999998766666666555554444332 367888843 34444444444445
Q ss_pred hcccCC
Q psy6142 446 FVPETQ 451 (483)
Q Consensus 446 ~lpet~ 451 (483)
+.+|+.
T Consensus 187 ~~~~~~ 192 (366)
T TIGR00886 187 VGADTP 192 (366)
T ss_pred hcccCC
Confidence 556643
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.67 E-value=3.7e-07 Score=93.47 Aligned_cols=143 Identities=15% Similarity=0.029 Sum_probs=96.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++++++.||+|||+.+..+.++..+......... .. ..+. .....+..|.+.+
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~-------~~~~--l~~~r~~~G~~~~ 146 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA--GG-------GIAL--VVFCRVIQGLAQG 146 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH--Hc-------CchH--HHHHHHHHHHhcc
Confidence 34556666788899999999999999999998887665544433221111 00 0111 2222233344444
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL-LGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
.. +....+.+|.+|++.|+++.++......++..+.+.+...+... .+|+++|++.++..++..++.+.+.||.
T Consensus 147 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 147 SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 32 34456888999999999999999888778888888777777666 4899999988887766555554555553
No 166
>KOG0569|consensus
Probab=98.66 E-value=6.2e-07 Score=89.84 Aligned_cols=137 Identities=20% Similarity=0.247 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-c
Q psy6142 301 TIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-S 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~ 379 (483)
.....++.++|+++++.++||+|||..+..+.+...++....+.....+. .-...+..+..|...|.. .
T Consensus 66 vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~----------~e~li~GR~i~Gl~~gl~~~ 135 (485)
T KOG0569|consen 66 VSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPS----------FEMLILGRLIVGLACGLSTG 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhh----------HHHHHHHHHHHHHHhHHHHH
Confidence 34446788899999999999999999888877766665554443332221 122233334444444443 2
Q ss_pred hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 380 IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG----THGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 380 ~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
....|..|+-|.+.||....+......++..++..... .+.+| |+..+.+-.+.+++. .+...++||+
T Consensus 136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l--~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PES 207 (485)
T KOG0569|consen 136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGL--PSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPES 207 (485)
T ss_pred HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHcc--HHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCC
Confidence 33478999999999999998887766555555543332 22233 333333344444444 3445688998
No 167
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.63 E-value=5.8e-09 Score=107.31 Aligned_cols=117 Identities=15% Similarity=0.056 Sum_probs=3.0
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc----------------------
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN---------------------- 80 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~---------------------- 80 (483)
.++++..+.+++.+.+-++.++..++..++++|..|-|-+-++.+++.+|+++.++.+
T Consensus 32 RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~ 111 (539)
T PF03137_consen 32 RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISS 111 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccc
Confidence 3558999999999999999999999999999998777778888999999999887742
Q ss_pred ----------------------------cHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHH
Q psy6142 81 ----------------------------GVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGIL 132 (483)
Q Consensus 81 ----------------------------~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~ 132 (483)
-+.+++++.++.|+|..-.++...+|++|..+++.-+...++......+|+.
T Consensus 112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ----------------------------------------SSS-------------------------------------
T ss_pred ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 1236689999999999999999999999999999999888888888888888
Q ss_pred HHHHhhh
Q psy6142 133 TCFIAGT 139 (483)
Q Consensus 133 ~~~~~g~ 139 (483)
++.++|.
T Consensus 192 ~Gf~lg~ 198 (539)
T PF03137_consen 192 LGFLLGS 198 (539)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 8777664
No 168
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.62 E-value=2.2e-07 Score=93.76 Aligned_cols=144 Identities=17% Similarity=0.098 Sum_probs=107.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
.+.+..+.+++.+.+.+|..+|.++.|++.||.++++.+..+.++..++.++..+.++.+...++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778888899999999999999999999888888888888888888888888988888899999999988877778
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHH-Hhhhhhh---hHHHHHHhhHHH-HHHHHHHhcCcCC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCF-IAGTFLN---WYQLAFFGACIP-VPFLICMFLIPET 167 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~-~~g~~~~---w~~~~~~~~~~~-~~~~~~~~~~pES 167 (483)
.+++.|..|++.||+..++......+|..+++ +.|...+ .+..+....... +...+....+||.
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 88999999999999988877776666544433 3344333 334443323222 3333344555553
No 169
>TIGR00898 2A0119 cation transport protein.
Probab=98.62 E-value=2.3e-07 Score=96.07 Aligned_cols=131 Identities=19% Similarity=0.109 Sum_probs=97.2
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccH--HHHHHHHHHhhhcccccccchhhhhcccCCCCc
Q psy6142 38 MPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGV--PMILAGRCVAGFCVGIASLALPVYLGETVQPEV 115 (483)
Q Consensus 38 ~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~--~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~ 115 (483)
..+....|.++.+++.||+|||+.+.++.++..++.++..+.++. +...+.-++.+++.++..+..+.+..|..|++.
T Consensus 364 ~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 443 (505)
T TIGR00898 364 SGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV 443 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH
Confidence 445567789999999999999999999999988888888877654 555666777888888888888999999999999
Q ss_pred cchhchHhHHHHHHHHHHHHHhhhhhh--hHHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 116 RGTLGLLPTFLGNIGILTCFIAGTFLN--WYQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 116 Rg~~~~~~~~~~~~g~~~~~~~g~~~~--w~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
|+...++.+....+|.++++.+..... +...+++.....++..+..+++||+.
T Consensus 444 r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 444 RNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999888888777777666554443222 23333333444444555566789864
No 170
>KOG0255|consensus
Probab=98.62 E-value=7.7e-07 Score=92.54 Aligned_cols=136 Identities=21% Similarity=0.226 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.....+..++.++|+++.|++.||+|||+.++.+.++..++.+..+... ......++.+..|+..+.
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~-------------~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP-------------NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC-------------cHHHHHHHHHHHHhhccc
Confidence 3456666788899999999999999999999998776666553332210 123334445555554443
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
..+.+.+..|+++++.|+.+..+ ..+.+.++.+.+.....+.. +|++.+|+..+..++.++. .++.||+
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 35667888999999999999999 77777888887777666665 7899999888887776554 4555687
No 171
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.61 E-value=3.6e-07 Score=91.05 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=98.6
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|.+.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.+...+..++.++++|.+.+.+.++++|+..|...+
T Consensus 233 ~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~ 312 (382)
T TIGR00902 233 QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHL 312 (382)
T ss_pred HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH
Confidence 35677888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhH-HHHHHHHHHHHH
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPT-FLGNIGILTCFI 136 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~-~~~~~g~~~~~~ 136 (483)
....|+.+. |+++|+...++.+ ....+|..+++.
T Consensus 313 ~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 313 AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 9999988766654 345555544443
No 172
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.60 E-value=6.2e-07 Score=90.65 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.+..+.+...++........ ..+... ...+..|.+.+.
T Consensus 56 ~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----------~~~~l~--~~r~l~G~g~g~ 122 (426)
T PRK12307 56 AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS-----------GVIMLT--LSRFIVGMGMAG 122 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh-----------HHHHHH--HHHHHHHHHHhh
Confidence 4556667788889999999999999999999888776665554332211 012222 223334444432
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHH
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVV 435 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~ 435 (483)
.+....+..|.+|++.|+++.++......++..+.+.+.+.+.+..+|++.|++....
T Consensus 123 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 123 EYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 2344567789999999999999988777677777776666666667888888764433
No 173
>KOG2532|consensus
Probab=98.59 E-value=2.2e-06 Score=86.68 Aligned_cols=167 Identities=17% Similarity=0.150 Sum_probs=114.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHh
Q psy6142 295 INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFS 374 (483)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 374 (483)
.++.+..-....+.+++.+-+++++||+|-|+++..+.++..+..+........ ..+..++.-++.+++.+
T Consensus 73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~---------~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 73 TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI---------GFYLLLVLRFLQGLGQG 143 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh---------cchhhHHHHHHhHHHHh
Confidence 345566667778899999999999999999999988876665554433322211 11222333333333333
Q ss_pred ccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHHHHhhhhc---cc-
Q psy6142 375 IGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL-LGTHGAFWLFGVVCLVGLFFVIIFV---PE- 449 (483)
Q Consensus 375 ~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~f~i~~~~~~i~~i~~~~~l---pe- 449 (483)
..+ +....+.+.-.|++.|++..++......++.++...+.+.+-+. .||+++|+++++++++-.++-+++. |+
T Consensus 144 ~~~-pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 144 VLF-PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHH-hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 333 33346677899999999999999998888888888788878777 8999999999999887655433333 33
Q ss_pred CCCCCHHHHHHHhcCCCCCCCC
Q psy6142 450 TQGKSLEDIERNLTGGGSPDGG 471 (483)
Q Consensus 450 t~~~~l~ei~~~~~~~~~~~~~ 471 (483)
.+..+.+|.+...++|.....+
T Consensus 223 h~~is~~El~~I~~~k~~~~~~ 244 (466)
T KOG2532|consen 223 HPNISEKELKYIEKGKSEAHVK 244 (466)
T ss_pred CCCCCHHHHHHHHhcccccccC
Confidence 3555677777777766555444
No 174
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.58 E-value=2.1e-06 Score=85.88 Aligned_cols=143 Identities=17% Similarity=0.137 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.+..+.....++...... .. ..+...+.. +..+.+.+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~----~~-------~~~~l~~~~--~~~g~~~~ 111 (394)
T PRK11652 45 VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF----AH-------SLTVLIAAS--AIQGLGTG 111 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH----Hc-------cHHHHHHHH--HHHHhhhh
Confidence 345566667788899999999999999999988876655544432211 11 012222222 22333333
Q ss_pred c-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 377 F-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 377 ~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
. .+....+..|.+|.+.|+.+.+........+..+++.....+.+..||+++|++.++..++..+...++.||++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 2 233345667889989999888887666656666666665666666789988988777666554555566788654
No 175
>PRK10504 putative transporter; Provisional
Probab=98.57 E-value=1.9e-06 Score=88.37 Aligned_cols=141 Identities=14% Similarity=0.101 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++..++.++.+++.||+|||+.++.+.+...++..... . .. ..+...+..+ ..+.+.+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~--~--~~-------~~~~l~~~~~--l~g~~~~~ 114 (471)
T PRK10504 48 HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA--L--SG-------TLNELLLARV--LQGVGGAM 114 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH--H--hC-------CHHHHHHHHH--HHHhhhHH
Confidence 3455555677788999999999999999998877655544443221 1 10 1122222222 23333332
Q ss_pred -cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 -GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 -~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
.+....+..|.+|++.|+++.++......++..+++...+.+.+..+|++.|++....+.+..+......|+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 115 MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 23445677899999999999999888777888888777777777788999998877776666665555556543
No 176
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.57 E-value=2.8e-07 Score=91.63 Aligned_cols=108 Identities=19% Similarity=0.137 Sum_probs=83.3
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHH--HHHHh--hccHHHHHHHHHHhhhccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSF--LLIAL--ANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~--~l~~~--a~~~~~l~~~R~l~G~~~g~~ 99 (483)
.+.+..+.++..+...++..++.++.|+++||+|||+.+.....+..+.. ++..+ .++.+.+....++.|++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 44566778888888899999999999999999999998876655544433 22222 256777788899999999999
Q ss_pred ccchhhhhcccCCCCccchhchH-hHHHHHHHH
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLL-PTFLGNIGI 131 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~-~~~~~~~g~ 131 (483)
.+...+++.|..|++.|++..++ .+....+|.
T Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 330 TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred hhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 99999999999999999997655 344444454
No 177
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.57 E-value=4.6e-07 Score=90.20 Aligned_cols=127 Identities=11% Similarity=0.052 Sum_probs=91.3
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
.+.+..+.++..+.+.++..+|.++.|++.||+|||+++..+..+..++.+... + ...+...+++.|++.+...+..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHH
Confidence 345666777888888899999999999999999999999988888777665443 2 2344567888888877788888
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHH-Hhhhh---hhhHHHHHHhhHH
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCF-IAGTF---LNWYQLAFFGACI 153 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~-~~g~~---~~w~~~~~~~~~~ 153 (483)
..++.|..|+++++...........+|..+++ +.|.. .+|+..+.+....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~ 360 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASV 360 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 88899999988877665555555666654444 33333 3455555543333
No 178
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.57 E-value=1.2e-06 Score=89.99 Aligned_cols=143 Identities=20% Similarity=0.261 Sum_probs=90.8
Q ss_pred hhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHH
Q psy6142 288 EEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFV 367 (483)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (483)
..+.+.+.+..|......+....+.++.|++.|.+|||..++.+.++.+++.+..+. .++ -...+....
T Consensus 71 ~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-----A~~------~~~~iag~~ 139 (599)
T PF06609_consen 71 NADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-----AQN------MNTFIAGMV 139 (599)
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-----CCc------HHHHHHHHH
Confidence 344455666678888888999999999999999999999999987766665554332 111 112233333
Q ss_pred HHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 368 VYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 368 l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
+. +.+.|........++|+.|.+.|..+.++............+..........+|+|.|+++++...++++..
T Consensus 140 l~--GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 140 LY--GVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HH--HHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 33 334444445566689999999998887765543222121222222223334579999998887766655443
No 179
>KOG2816|consensus
Probab=98.55 E-value=7e-06 Score=82.68 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=85.4
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcc--cccccchhhhhcccCCCCc
Q psy6142 38 MPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCV--GIASLALPVYLGETVQPEV 115 (483)
Q Consensus 38 ~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~--g~~~~~~~~~i~E~~p~~~ 115 (483)
..+..++-++..|.++||+|||..+.+.+....+..+...+.. +|.+. +.|+.. +.......+|+++....+.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhH
Confidence 4567788999999999999999999999999999888888877 44333 555533 3445567778999999999
Q ss_pred cchhchHhHHHHHHHHHHHHHhhh-hhhh---HHHHHHhhHHHHHH-HHHHhcCcCCh
Q psy6142 116 RGTLGLLPTFLGNIGILTCFIAGT-FLNW---YQLAFFGACIPVPF-LICMFLIPETP 168 (483)
Q Consensus 116 Rg~~~~~~~~~~~~g~~~~~~~g~-~~~w---~~~~~~~~~~~~~~-~~~~~~~pESp 168 (483)
|.....+...+...+..+++..+. ...+ -..+++.....+.. .....++|||-
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 988766666655554444443333 2333 23444444333333 33456789973
No 180
>PRK03699 putative transporter; Provisional
Probab=98.54 E-value=3.6e-07 Score=91.37 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=99.5
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
++.+..+.++..+.+.++..+|.++.|+++||+|||+.+.....+..++..+....++.+.+.+.-++.|++.++..+..
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 236 FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 45666778888888899999999999999999999999998887777776777777888778888899999888888888
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHH-HHhhhh---hhhHHHHHHhhHHHHHHHHHHhcC
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTC-FIAGTF---LNWYQLAFFGACIPVPFLICMFLI 164 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~-~~~g~~---~~w~~~~~~~~~~~~~~~~~~~~~ 164 (483)
.++..|..|.+ ++...+....+..+|..++ .+.|.. .+++..++......+..++...++
T Consensus 316 ~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 316 ITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 88888887754 4554444444445554433 333433 356666555444444443333333
No 181
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.54 E-value=1.6e-06 Score=86.83 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cc
Q psy6142 301 TIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GS 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~ 379 (483)
.....+...+..++.+++.||+|||+.+..+.+...+....... .+ ..+...+..++ .+.+.+. .+
T Consensus 52 ~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-----~~------~~~~l~~~~~l--~g~~~~~~~~ 118 (400)
T PRK11646 52 LGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-----AH------EPWLLWLSCIL--SGLGGTLFDP 118 (400)
T ss_pred HHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-----hc------cHHHHHHHHHH--HHHHHHHHHH
Confidence 33345556667889999999999999998887666655543321 11 11222332322 2333332 23
Q ss_pred hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 380 IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 380 ~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
....+..|.+|++.|+++.++......++..+++...+.+. ..+++++|++.+..+++..+...++.||.
T Consensus 119 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 119 PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 33456779999999999999999888888888877777666 55888889887777666555555566764
No 182
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.52 E-value=2.1e-06 Score=87.16 Aligned_cols=131 Identities=18% Similarity=0.157 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRL-GRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~-GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
...........++.+++|++.||+ |||+.++.+.+.+.++...+.. ... ......+...+.. .+.|.
T Consensus 49 ~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~----~~~------~~~~~~l~l~li~--iG~G~ 116 (493)
T PRK15462 49 ELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA----SEI------HPSFLYLSLAIIV--CGYGL 116 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH----hhc------chhHHHHHHHHHH--Hhccc
Confidence 444555567778899999999999 9999998887766655443321 000 0011122222222 33333
Q ss_pred c-chhhhhhcccCCcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Q psy6142 378 G-SIPWLMMGEILPAK--IRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 378 ~-~~~~~~~~Ei~P~~--~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i 441 (483)
. +....+.+|.+|++ .|.++.++.....++++.+.+...+.+.+..||++.|.+.++..+++.+
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 2 33356789999986 7999999999999899999999888888778999999886655444433
No 183
>KOG3626|consensus
Probab=98.51 E-value=1.2e-06 Score=90.90 Aligned_cols=118 Identities=17% Similarity=0.074 Sum_probs=104.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc------------------c---
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN------------------G--- 81 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~------------------~--- 81 (483)
.++++..+.+++.+.+-+|..+...+..+++-|.-|-+.+=++++++++++++.++.+ +
T Consensus 126 RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~ 205 (735)
T KOG3626|consen 126 RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSS 205 (735)
T ss_pred hcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcc
Confidence 3458888999999999999999999999999999999999999999999999998862 0
Q ss_pred ------------------------------HH-HHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHH
Q psy6142 82 ------------------------------VP-MILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIG 130 (483)
Q Consensus 82 ------------------------------~~-~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g 130 (483)
.+ +++++-++.|+|..-..+...+|++|...+++-....++......+|
T Consensus 206 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lG 285 (735)
T KOG3626|consen 206 SLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILG 285 (735)
T ss_pred ccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhh
Confidence 22 67899999999999999999999999999998888888888888888
Q ss_pred HHHHHHhhhh
Q psy6142 131 ILTCFIAGTF 140 (483)
Q Consensus 131 ~~~~~~~g~~ 140 (483)
++++.++|.+
T Consensus 286 PaiGfllgS~ 295 (735)
T KOG3626|consen 286 PAIGFLLGSF 295 (735)
T ss_pred hHHHHHHHHH
Confidence 8888887754
No 184
>PRK15075 citrate-proton symporter; Provisional
Probab=98.50 E-value=1.1e-06 Score=89.11 Aligned_cols=117 Identities=21% Similarity=0.186 Sum_probs=79.8
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH----HhhccHHHHHHHHHHhhhccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI----ALANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~----~~a~~~~~l~~~R~l~G~~~g~~ 99 (483)
.+.+..+.++....+.++..++.++.|+++||+|||+.+..+.++..+..... ...+++..+.+.-++.|++.|..
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSY 348 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 35566677788888889999999999999999999999887655443322211 12344445555566667777766
Q ss_pred ccchhhhhcccCCCCccchhchHh-HHHHHH-HHHHHHHhhhh
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLP-TFLGNI-GILTCFIAGTF 140 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~-~~~~~~-g~~~~~~~g~~ 140 (483)
.+....++.|..|++.|+...++. .+...+ |.+.+.+.+..
T Consensus 349 ~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 349 NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 666778899999999999976653 333333 44444444443
No 185
>KOG1330|consensus
Probab=98.50 E-value=4.4e-08 Score=95.12 Aligned_cols=151 Identities=14% Similarity=0.080 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc-
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI- 375 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 375 (483)
..+......++..+.+++.+++.||+.||+++..|..+-.++.+..+... . ..++.++....|.|-
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~-----------~--Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN-----------H--FWQVLLCRGFVGIGEA 136 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH-----------H--HHHHHHHHHHhccchh
Confidence 45667777888899999999999999999999988776666665444321 1 122223333333332
Q ss_pred cccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHHHHhhhhcccCCCCC
Q psy6142 376 GFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG-THGAFWLFGVVCLVGLFFVIIFVPETQGKS 454 (483)
Q Consensus 376 g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~f~i~~~~~~i~~i~~~~~lpet~~~~ 454 (483)
++.++....++++||...|+...++-+...-.|...+......+....+ |+++|+.-++..++..++.+++.+|-+++.
T Consensus 137 s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 137 SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 2446667789999999999999998776554444443332222333333 899999999998888888888888877655
Q ss_pred HHHHHH
Q psy6142 455 LEDIER 460 (483)
Q Consensus 455 l~ei~~ 460 (483)
.||.++
T Consensus 217 ~~~~~~ 222 (493)
T KOG1330|consen 217 RDEVDG 222 (493)
T ss_pred cccccc
Confidence 455443
No 186
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.49 E-value=1.5e-06 Score=87.00 Aligned_cols=143 Identities=18% Similarity=0.171 Sum_probs=94.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh-hccHHHHHHHHHHhhhcccccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL-ANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~-a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
.+.+..+.++..+.+.++..+|.++.|+++||+|||+.++.+..+..++.++... .++...+. -++.|++.++..+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHH
Confidence 4567778888889999999999999999999999999999888777776665543 33333222 25678888888777
Q ss_pred hhhhhcccC-CCCccchhchHhHHHHHHH-HHHHHHhhhhhh----hHHHHHHhhHHHHHHH-HHHhcCcCCh
Q psy6142 103 LPVYLGETV-QPEVRGTLGLLPTFLGNIG-ILTCFIAGTFLN----WYQLAFFGACIPVPFL-ICMFLIPETP 168 (483)
Q Consensus 103 ~~~~i~E~~-p~~~Rg~~~~~~~~~~~~g-~~~~~~~g~~~~----w~~~~~~~~~~~~~~~-~~~~~~pESp 168 (483)
......|.. |+++||+..++.+....++ .+.+.+.|...+ |...+.+.....+..+ ....+.||.+
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 776666666 4678888766655555444 334444444443 3444444444333333 3345677764
No 187
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.49 E-value=1.3e-06 Score=88.56 Aligned_cols=103 Identities=18% Similarity=0.054 Sum_probs=66.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH--h--hccHHHHHHHHHHhhhccccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA--L--ANGVPMILAGRCVAGFCVGIA 99 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~--~--a~~~~~l~~~R~l~G~~~g~~ 99 (483)
.+.+..+.++..++..++..++.++.|+++||+|||+.+.+..++..+...... . .++....+..=++.++..+..
T Consensus 274 ~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (432)
T PRK10406 274 AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFY 353 (432)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 445666777777777778888999999999999999988776655433332111 1 223322222222233333344
Q ss_pred ccchhhhhcccCCCCccchhchHhHHH
Q psy6142 100 SLALPVYLGETVQPEVRGTLGLLPTFL 126 (483)
Q Consensus 100 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~ 126 (483)
....+.+..|.+|+|.|+...++....
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 445678889999999999987665543
No 188
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.47 E-value=2.1e-05 Score=79.15 Aligned_cols=159 Identities=13% Similarity=0.081 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+...+..+...+..+..+++.||+|.|+.+..+.+...+.....+... .+. .+..+..++..++ .|++.+.
T Consensus 73 g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~--~~~----~~s~~~lli~r~l--~Gigg~~ 144 (462)
T PRK15034 73 FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAV--QNP----NTPFGIFIVIALL--CGFAGAN 144 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH--ccc----CCCHHHHHHHHHH--HHHHHHh
Confidence 3444445566667777789999999999998887766554444332210 100 0111222333333 3333222
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-----H-------------HhCcchhHHHHHHHHHHH
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLT-----A-------------LLGTHGAFWLFGVVCLVG 439 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~-----~-------------~~g~~~~f~i~~~~~~i~ 439 (483)
.+.....+++.+|++.||++.|+....+..+..+...+.+... . ..+++.+++++....++.
T Consensus 145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~ 224 (462)
T PRK15034 145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIA 224 (462)
T ss_pred HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 2334456789999999999999987666666655544443322 1 122455566776766666
Q ss_pred HHHhhhhcccCC--CCCHHHHHHHhcC
Q psy6142 440 LFFVIIFVPETQ--GKSLEDIERNLTG 464 (483)
Q Consensus 440 ~i~~~~~lpet~--~~~l~ei~~~~~~ 464 (483)
.++.+++.++.+ +.+.+|..+.++.
T Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~vlk~ 251 (462)
T PRK15034 225 TIAAWSGMNDIASSRASIADQLPVLQR 251 (462)
T ss_pred HHHHHHhCCCccccccCHHHHHHHhCC
Confidence 666555555532 3345555454443
No 189
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.46 E-value=2.1e-05 Score=75.06 Aligned_cols=93 Identities=20% Similarity=0.261 Sum_probs=79.1
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccc
Q psy6142 18 YNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g 97 (483)
|..|+.++.+..|.+.+-........+-..+.|.++||+|||+..+.-+++++++++ +-.++|++.++++|++.|++..
T Consensus 58 Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 58 YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATS 136 (354)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHH
Confidence 455777888888888888888888899999999999999999999999999999886 5567889999999999999988
Q ss_pred ccccchhhh-hcccC
Q psy6142 98 IASLALPVY-LGETV 111 (483)
Q Consensus 98 ~~~~~~~~~-i~E~~ 111 (483)
....+-=++ +.|.-
T Consensus 137 LLfS~FEsW~V~Eh~ 151 (354)
T PF05631_consen 137 LLFSAFESWMVHEHN 151 (354)
T ss_pred HHHHHHHHHHHHHHH
Confidence 877666555 56763
No 190
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.45 E-value=1.7e-06 Score=86.89 Aligned_cols=138 Identities=10% Similarity=0.002 Sum_probs=91.3
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHH-HhhHHHHHHHHHHHh-----hccHHHHHHHHHHhhhccc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTIL-STGLPFIVSFLLIAL-----ANGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~-~~~~l~~~~~~l~~~-----a~~~~~l~~~R~l~G~~~g 97 (483)
.+.+..+.++..+...++..+|.++.|+++||+|||+.+. .+.+...++.+...+ .++.+.+.+..++.|++.+
T Consensus 252 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~ 331 (402)
T TIGR00897 252 LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLA 331 (402)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHH
Confidence 3455566677777888999999999999999999998764 333333333333322 2456777888999999888
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHH-hhhh---hhhHHHHHHhhHHHHHHHHHHhc
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI-AGTF---LNWYQLAFFGACIPVPFLICMFL 163 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~-~g~~---~~w~~~~~~~~~~~~~~~~~~~~ 163 (483)
+..+. ...+.|..| ++||+..++.+....+|...++. .+.. .+|...+++.+...++..+...|
T Consensus 332 ~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 332 GYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 76553 455677655 68999888888777776554443 3333 35666666655554443333333
No 191
>PRK11043 putative transporter; Provisional
Probab=98.43 E-value=5.2e-06 Score=83.21 Aligned_cols=140 Identities=14% Similarity=0.006 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
..+......++..++.++.+++.||+|||+.+..+.....++...... .. ..+...+.. +..+.+.+
T Consensus 43 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----~~-------~~~~l~~~~--~l~G~~~~ 109 (401)
T PRK11043 43 VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW----VE-------SAAQLLVLR--FVQAVGVC 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH----hc-------CHHHHHHHH--HHHHhhhH
Confidence 345566667788899999999999999999988776555444332221 10 112222222 22233322
Q ss_pred cc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 377 FG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 377 ~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
.. +....+..|.+|.+.|+...+.......++..+.+.....+.+..+|+++|++.+++.++..+... +.+|.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 183 (401)
T PRK11043 110 SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL-RLKPS 183 (401)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH-HcCCC
Confidence 22 222346678999998888877776666666667776666677777899888887777766555443 34443
No 192
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.43 E-value=2e-06 Score=85.63 Aligned_cols=107 Identities=12% Similarity=0.054 Sum_probs=87.8
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|.+.+..+.+...+...++..++.++.|++.||+|+|+.+..+.+...++.++.+++++.+.+.+..++.|++.+...+.
T Consensus 234 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 313 (382)
T PRK11128 234 AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLA 313 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777788888899999999999999999999999999988888888999999999999999999998888
Q ss_pred hhhhhcccCCCCccchhchHhH-HHHHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPT-FLGNIG 130 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~-~~~~~g 130 (483)
...++.|.. ++++++..+... ....+|
T Consensus 314 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 314 AMRYIAARP-GSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHHHHHHCC-HhhhHHHHHHHHHHHHHHH
Confidence 999998874 555666555443 434445
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.42 E-value=1.2e-06 Score=99.98 Aligned_cols=117 Identities=17% Similarity=0.230 Sum_probs=101.5
Q ss_pred cccccc-hhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 24 VKINYI-QASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 24 ~~~~~~-~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
++.+.. +.+++.+...+|.++|+++.|+++||++||+.+.++.+++.++.++..+..+.+.++++-++.|++.++..+.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVP 342 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 455666 7888999999999999999999999999999999998888888888888889999999999999999999888
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF 140 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~ 140 (483)
..+++.|..|++.||+..++.++...+|..++..++..
T Consensus 343 ~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~ 380 (1146)
T PRK08633 343 LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTL 380 (1146)
T ss_pred HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888887777776555544443
No 194
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.42 E-value=4.8e-06 Score=84.46 Aligned_cols=107 Identities=21% Similarity=0.330 Sum_probs=86.5
Q ss_pred cchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh-ccHHHHHHHHHHhhhcccccccchhhh
Q psy6142 28 YIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA-NGVPMILAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 28 ~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a-~~~~~l~~~R~l~G~~~g~~~~~~~~~ 106 (483)
..+.++..++..++.+++.+++|+++||+|||+++..+.++..++.++..+. ++.+.+.+..++.|++.+...+...++
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWAL 335 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777889999999999999999999999999998888887777665 356777888999999999999999999
Q ss_pred hcccCC-------CCccchhchHhHHHHHHHHHHH
Q psy6142 107 LGETVQ-------PEVRGTLGLLPTFLGNIGILTC 134 (483)
Q Consensus 107 i~E~~p-------~~~Rg~~~~~~~~~~~~g~~~~ 134 (483)
+.|..| ++.+|...++.+....+|..++
T Consensus 336 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 336 VADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 998876 4556777777776666664433
No 195
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.42 E-value=2.3e-05 Score=76.79 Aligned_cols=133 Identities=17% Similarity=0.221 Sum_probs=102.9
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccc
Q psy6142 38 MPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRG 117 (483)
Q Consensus 38 ~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg 117 (483)
.+-..+...+....++|..|.|+++++..+...+..++.-+.++...+-+..++-|++.+.+ .+.++|+--..|+++=-
T Consensus 50 ~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq 128 (412)
T PF01770_consen 50 WTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQ 128 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHH
Confidence 33445566777788999999999999999999999999999999999999999999998887 46778887777777777
Q ss_pred hhchHhHHHHHHHHHHHHHhhhhh------hhHHHHHHhhHHHHHHHHHHhcCcCChhhh
Q psy6142 118 TLGLLPTFLGNIGILTCFIAGTFL------NWYQLAFFGACIPVPFLICMFLIPETPRWY 171 (483)
Q Consensus 118 ~~~~~~~~~~~~g~~~~~~~g~~~------~w~~~~~~~~~~~~~~~~~~~~~pESp~~l 171 (483)
++.+....+...|...+..+|..+ +.+.+..+........++..+++|-.++-+
T Consensus 129 ~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~ 188 (412)
T PF01770_consen 129 KVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSL 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence 788888888888877777777654 234555554444445555667777655443
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.42 E-value=2.9e-06 Score=86.21 Aligned_cols=114 Identities=15% Similarity=0.123 Sum_probs=96.2
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchh--HHHHHhhHHHHHHHHHHHh--------hccHHHHHHHHHHh
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRR--TTILSTGLPFIVSFLLIAL--------ANGVPMILAGRCVA 92 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr--~~l~~~~~l~~~~~~l~~~--------a~~~~~l~~~R~l~ 92 (483)
+++++..+...+.-+..+..++|++++|++.||+|-| ++++.++....+..+...+ .++-+.+.+.=++.
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~ 390 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLI 390 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHH
Confidence 5677788887888888999999999999999999999 9999999888776666666 67778888899999
Q ss_pred hhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHH
Q psy6142 93 GFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI 136 (483)
Q Consensus 93 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~ 136 (483)
|+..|+..+...++.+|..|+++.+..-++..+..-....++++
T Consensus 391 G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 391 GLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777776665555444443
No 197
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.41 E-value=5.4e-06 Score=80.11 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
-........+..-++-++.|.+.||.+.|..+..|.+...++.+.++.... -+...+...+-...-++|
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s-----------~~~~~~l~~lng~fQg~G 134 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPS-----------LFLFAVLWVLNGWFQGMG 134 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhH-----------HHHHHHHHHHHHHHhcCC
Confidence 345566677788899999999999999999998888777777766654321 123344444445555666
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH--HHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF--NDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
..+. .-.++--+|.+.||+-.|+=++.-++|+.+.+.+. .......+|+..|++-++++++..++.++.++||
T Consensus 135 wpp~-~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 135 WPPC-ARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred CcHH-HHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5443 45666789999999999987777677777777666 5555556889999988888877666666666544
No 198
>KOG2615|consensus
Probab=98.40 E-value=2.7e-06 Score=80.74 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
++.....++..++.++..|.+.||+|||+.++.+.....+.....+..- .. .......+..|..-|.
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~------------~F-~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR------------NF-AAFVLARFLGGIFKGN 137 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH------------HH-HHHHHHHHhhhhccCc
Confidence 3455666788999999999999999999999887655554433222110 01 1111112334444444
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---HhCcchhHH--HHHHHHHHH-HHHhhhhcccCC
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA---LLGTHGAFW--LFGVVCLVG-LFFVIIFVPETQ 451 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~f~--i~~~~~~i~-~i~~~~~lpet~ 451 (483)
-++.-.+++|+++++.|+.+++.......+|-++++...+++.+ ..|..+-++ ++..+.... .....+++|||-
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 45667899999999999999998766555555555555444444 333222111 111111111 233456899994
Q ss_pred C
Q psy6142 452 G 452 (483)
Q Consensus 452 ~ 452 (483)
+
T Consensus 218 ~ 218 (451)
T KOG2615|consen 218 P 218 (451)
T ss_pred c
Confidence 4
No 199
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.39 E-value=6.9e-05 Score=75.68 Aligned_cols=145 Identities=24% Similarity=0.263 Sum_probs=89.0
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc---c-hhHH-HHHhhHHHHHHHHHHHhhc----cHHHHHHHHHH
Q psy6142 21 YDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESL---G-RRTT-ILSTGLPFIVSFLLIALAN----GVPMILAGRCV 91 (483)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~---G-Rr~~-l~~~~~l~~~~~~l~~~a~----~~~~l~~~R~l 91 (483)
.++++.+..+.+...+...+.-. --+++|.++|.+ | |||. ++++.++..++.+..+..+ +.+...+.=++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 35677888888777776655444 567889999976 3 4444 5566666656566555533 45666777788
Q ss_pred hhhcccccccchhhhhcccCCCCc--cchhchHhHHHHHHHHHHHHHhh-hh---hhhHHHHHHhhHHHHHHH-HHHhcC
Q psy6142 92 AGFCVGIASLALPVYLGETVQPEV--RGTLGLLPTFLGNIGILTCFIAG-TF---LNWYQLAFFGACIPVPFL-ICMFLI 164 (483)
Q Consensus 92 ~G~~~g~~~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~g~~~~~~~g-~~---~~w~~~~~~~~~~~~~~~-~~~~~~ 164 (483)
..+|....-..+=+.+.|....+- ||...+....+-..|.+++..++ .. .+++..+.+...++.+.. ...++.
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhh
Confidence 888888888888888889884443 45544444444455555444333 22 234555555554444333 334444
Q ss_pred cC
Q psy6142 165 PE 166 (483)
Q Consensus 165 pE 166 (483)
+|
T Consensus 176 ~e 177 (433)
T PF03092_consen 176 EE 177 (433)
T ss_pred hh
Confidence 54
No 200
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.39 E-value=1.8e-06 Score=88.74 Aligned_cols=113 Identities=20% Similarity=0.145 Sum_probs=101.4
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
+++.+....+++.+++.+|..+|+++.+++.+|+++++.+..+.+++.++.+..+++++.+..++.-++.|++.......
T Consensus 248 ~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~ 327 (524)
T PF05977_consen 248 VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSS 327 (524)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778899999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCF 135 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~ 135 (483)
..+.+.+..|++.||+..++.+.....++.++.
T Consensus 328 ~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGs 360 (524)
T PF05977_consen 328 LNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGS 360 (524)
T ss_pred HHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888777766654443
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.38 E-value=6.8e-06 Score=82.57 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=87.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..+......++.+++++..+++.||+|||+.++.+.++..++....... ... ...+..++ ..+..+.+.
T Consensus 39 ~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~~------~~~~~~l~--~~~l~G~g~ 108 (410)
T TIGR00885 39 QAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AEI------MNYTLFLV--GLFILTAGL 108 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--Hhh------ccHHHHHH--HHHHHHhhH
Confidence 34567777888999999999999999999999998877666654432111 000 01122222 233444444
Q ss_pred ccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH--------------------------HHhCcchh
Q psy6142 376 GFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLT--------------------------ALLGTHGA 428 (483)
Q Consensus 376 g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~--------------------------~~~g~~~~ 428 (483)
|.. +....+..|..|++.|++..++...+..++..+++.+...+. +..+|+++
T Consensus 109 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 188 (410)
T TIGR00885 109 GFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTP 188 (410)
T ss_pred HHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHH
Confidence 432 223356678889999999999888887777777665554432 12357888
Q ss_pred HHHHHHHHHHHHH
Q psy6142 429 FWLFGVVCLVGLF 441 (483)
Q Consensus 429 f~i~~~~~~i~~i 441 (483)
|++.+++.++..+
T Consensus 189 fl~~a~~~~~~~~ 201 (410)
T TIGR00885 189 YMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHHH
Confidence 8877776655433
No 202
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.37 E-value=2.9e-06 Score=84.91 Aligned_cols=126 Identities=13% Similarity=0.194 Sum_probs=94.2
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
...++..++..+...++.+..|++.||+|||+.+.++.+++.++..+..+++|.+.+.+.++++|++.+........+..
T Consensus 254 ~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 333 (396)
T TIGR00882 254 RVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYIT 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777788889999999999999999999999988888888788999999999999999998776666667788
Q ss_pred ccCCCCccchhchH-hHHHHHHHHHHH-HHhhhhh---hhHHHHHHhhHHH
Q psy6142 109 ETVQPEVRGTLGLL-PTFLGNIGILTC-FIAGTFL---NWYQLAFFGACIP 154 (483)
Q Consensus 109 E~~p~~~Rg~~~~~-~~~~~~~g~~~~-~~~g~~~---~w~~~~~~~~~~~ 154 (483)
|..|++.++...+. .+....+|..++ .+.|... +|+..+.+..++.
T Consensus 334 ~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~ 384 (396)
T TIGR00882 334 SQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIV 384 (396)
T ss_pred HhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHH
Confidence 88888888875544 445555554443 3344433 4566665544443
No 203
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.37 E-value=3.4e-06 Score=86.84 Aligned_cols=144 Identities=19% Similarity=0.276 Sum_probs=97.4
Q ss_pred CcccccchhhHHHH-HHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHH---HHhh-ccHHHHHHHHHHhhhccc
Q psy6142 23 DVKINYIQASWIGS-LMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLL---IALA-NGVPMILAGRCVAGFCVG 97 (483)
Q Consensus 23 ~~~~~~~~~~~~~s-~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l---~~~a-~~~~~l~~~R~l~G~~~g 97 (483)
+.+.+..+.++... ...++.++|.++.|+++||+|||+.+....++..++.++ .+.. ++.+.+...-+++.+..|
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG 331 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 35667777888764 556899999999999999999999887766554544332 2233 455555556666666656
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHH-HHHHHhhhhh---hhHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI-LTCFIAGTFL---NWYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g~~~---~w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
.......++..|.+|++.+++..++.+....+|. +.+++.|... +|+..+.+...+.++.++...++++
T Consensus 332 ~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 332 MGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5556678888899999999887666666666664 3445555443 5777676666666666555555554
No 204
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.36 E-value=3.6e-06 Score=79.92 Aligned_cols=108 Identities=26% Similarity=0.311 Sum_probs=90.7
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhcc--HHHHHHHHHHhhhcccccccchhhh
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG--VPMILAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~--~~~l~~~R~l~G~~~g~~~~~~~~~ 106 (483)
.+.++..+.+.++..++.++.|+++||+|||+.+..+......+.++.++..+ .+.+.+.|+.+|++.|...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 56788999999999999999999999999999988888877777888888887 8999999999999999999999999
Q ss_pred hcccCCC-CccchhchHhHH-HHHHHHHHHHH
Q psy6142 107 LGETVQP-EVRGTLGLLPTF-LGNIGILTCFI 136 (483)
Q Consensus 107 i~E~~p~-~~Rg~~~~~~~~-~~~~g~~~~~~ 136 (483)
+.|..|+ +.|+........ ....|...++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 567776555555 45555544443
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.35 E-value=1.2e-05 Score=79.27 Aligned_cols=131 Identities=17% Similarity=0.079 Sum_probs=79.6
Q ss_pred HHHHHHhhhcc-----cchHHHH-HHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhh
Q psy6142 312 VLIATALIDRL-----GRKILLY-ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLM 384 (483)
Q Consensus 312 ~~i~~~lvdr~-----GRr~~l~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~ 384 (483)
.++.+.++||+ |||+.++ .+.+...++...++ + ... ....+......+ ..+...+. .+....+
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~--~--~~~----~~~l~~l~~~~~--~~~~~~~~~~~~~~a~ 107 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS--F--LVP----STDLPLLAGLAF--LIAFFSATQDIALDAW 107 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH--c--CCc----chhHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 78999999998 8988754 44433333332221 1 111 011111121111 12222222 2333457
Q ss_pred hcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC--------cchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 385 MGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG--------THGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 385 ~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
+.|.+|++.|+.+.++......++..+++.....+....+ |+.+|++.+++.++..+..++..||.+.
T Consensus 108 ~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~ 183 (356)
T TIGR00901 108 RLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQE 183 (356)
T ss_pred HHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 8899999999999999887777777777777666666667 8888988887777765554445677543
No 206
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.33 E-value=1.8e-05 Score=90.27 Aligned_cols=141 Identities=17% Similarity=0.144 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc-cc
Q psy6142 300 CTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG-FG 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~ 378 (483)
......+..++.++++|+++||+|||+++............. +....... ..+..+ ...+..+.+.+ +.
T Consensus 57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~-~~~~~~~~-------s~~~l~--~~~~l~gi~~a~~~ 126 (1140)
T PRK06814 57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAAL-AIYGFHLN-------SVPLLF--AALFLMGIHSALFG 126 (1140)
T ss_pred HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHH-HHHHHHHh-------hHHHHH--HHHHHHHHHHHhhc
Confidence 344555677888999999999999999753322211111111 11111100 112222 33334444333 34
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 379 SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 379 ~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
+....++.|++|.+.|+.+.|+......++..+++.+.+.+....+|++.|+..+++.+++ ++..+++|+++
T Consensus 127 p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 198 (1140)
T PRK06814 127 PIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTG 198 (1140)
T ss_pred hHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCC
Confidence 5667788899999999999999999988888888888888888788887774444444443 33445566653
No 207
>KOG3764|consensus
Probab=98.33 E-value=1.9e-06 Score=82.35 Aligned_cols=146 Identities=18% Similarity=0.190 Sum_probs=105.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
..++..-.-.+.+++.+++.|.+.||+|+|..+++|..++..+.+..+..- ..+..+++-.+.+++ .
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~-----------sy~~l~vAR~LQgvg--s 173 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN-----------SYPMLFVARSLQGVG--S 173 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc-----------hhHHHHHHHHHhhhh--H
Confidence 344555556788999999999999999999999999887776655443211 112233333333333 2
Q ss_pred cccc-hhhhhhcccCCccc-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCC
Q psy6142 376 GFGS-IPWLMMGEILPAKI-RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGK 453 (483)
Q Consensus 376 g~~~-~~~~~~~Ei~P~~~-R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~ 453 (483)
++.. ....+.++.||.+. |++++|+.-.+-..|..+++...+.+++..|...+|.+.++++++...+.++.++.++..
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 3222 22346678888776 699999998888888888888888899999999999999999998877777666666554
Q ss_pred C
Q psy6142 454 S 454 (483)
Q Consensus 454 ~ 454 (483)
+
T Consensus 254 ~ 254 (464)
T KOG3764|consen 254 P 254 (464)
T ss_pred c
Confidence 4
No 208
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.31 E-value=3.2e-09 Score=108.21 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
.+......++.++|+++.+++.||+|||+.++.+.++..++.+..+..... ...+ ......+..|++.|.
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~--------~~~~--~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY--------NNFW--MLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc--------cccc--ccccccccccccccc
Confidence 455666778889999999999999999999988876655554433221100 0111 222333445566654
Q ss_pred c-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH---hCcchhHHHHHHHHHHHHHHhhhhcccC
Q psy6142 378 G-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTAL---LGTHGAFWLFGVVCLVGLFFVIIFVPET 450 (483)
Q Consensus 378 ~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~f~i~~~~~~i~~i~~~~~lpet 450 (483)
. .....|+.|..|++.|+...++.......|..+........... .+|+..+++.++..++. ++..+++||+
T Consensus 119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pES 194 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 3 45568999999999999888877655434433332221111111 23666665555555443 3345678998
No 209
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.30 E-value=3.6e-06 Score=81.35 Aligned_cols=111 Identities=18% Similarity=0.219 Sum_probs=98.6
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
|+++++.+....+-...+..++|++++|+|.||+|-|+++..+++++.+..+..-+...-.-+.++=.+.|+..|+....
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~ 361 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQAS 361 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHH
Confidence 68889999999999999999999999999999999999999999999999998888877777778889999999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILT 133 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~ 133 (483)
+.+|..+..|+++-+..-+++....-.+...
T Consensus 362 SRSy~~~lvp~~k~~~fFglyaltgra~S~~ 392 (438)
T COG2270 362 SRSYLARLVPKGKEGRFFGLYALTGRAASFL 392 (438)
T ss_pred HHHHHHHhCCCccccceeehhhhhhhHHHHH
Confidence 9999999999999999777666665554433
No 210
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.28 E-value=1e-05 Score=74.45 Aligned_cols=141 Identities=18% Similarity=0.152 Sum_probs=100.1
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh-------ccHHHHHHHHHHhhhcc
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA-------NGVPMILAGRCVAGFCV 96 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a-------~~~~~l~~~R~l~G~~~ 96 (483)
.+.++.|...+++.-.+|..+| +..|.+.|++|.+.++.++.+...+|..+..++ +.+|.+++..++.|.+.
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~ 110 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSS 110 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccH
Confidence 4489999999999999999986 888999999999999999999999998877664 46788898899998887
Q ss_pred cccccchhhhhcccCCCCccchhchHhHHHHHHHH-HHHHHhhhhhh---hHHHHHHhhHHHHHHHHHHhcCcC
Q psy6142 97 GIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI-LTCFIAGTFLN---WYQLAFFGACIPVPFLICMFLIPE 166 (483)
Q Consensus 97 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g~~~~---w~~~~~~~~~~~~~~~~~~~~~pE 166 (483)
+.....+..-..+.+| ++||+..++......++. +...+...+.. ..-+.+.+..+.+..++...++++
T Consensus 111 ~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 111 CWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheec
Confidence 7665555555667887 579998777766666543 33333222222 123333344444555555555543
No 211
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.28 E-value=1.3e-05 Score=82.20 Aligned_cols=127 Identities=14% Similarity=0.047 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
+.............+++|++.|| +|||+.++.+.++..++...++.. .. .... +...+...+.+.|.
T Consensus 54 ~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~----~~------~~~l--l~~~~~l~~ig~g~ 121 (489)
T PRK10207 54 ITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS----LL------KPDL--IFIALGTIAVGNGL 121 (489)
T ss_pred HHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh----cc------chhH--HHHHHHHHHhcccc
Confidence 33344444555666789999999 999999999987776655544321 00 0011 11222333444443
Q ss_pred c-chhhhhhcccCCccc--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHH
Q psy6142 378 G-SIPWLMMGEILPAKI--RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCL 437 (483)
Q Consensus 378 ~-~~~~~~~~Ei~P~~~--R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~ 437 (483)
. +....+.+|.+|++. |+.+.++.+....++..+++...+.+.+..||++.|++.++...
T Consensus 122 ~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 122 FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 2 344567889999885 46777777777778888888778888888899999988654333
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.28 E-value=1.2e-05 Score=82.34 Aligned_cols=131 Identities=18% Similarity=0.103 Sum_probs=90.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
.........++..++.+++|++.|| +|||+.++.+.+...++...++.. . ..+...+ .+...+.+.
T Consensus 50 ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~----~-------~~~~~~~--~~~l~g~g~ 116 (475)
T TIGR00924 50 AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS----I-------YPDLIFY--GLGTIAVGS 116 (475)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc----c-------cHhHHHH--HHHHHHhcc
Confidence 3455666678889999999999999 899999988877666655443321 0 0112222 222344444
Q ss_pred cc-cchhhhhhcccCCccc---hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Q psy6142 376 GF-GSIPWLMMGEILPAKI---RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGL 440 (483)
Q Consensus 376 g~-~~~~~~~~~Ei~P~~~---R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~ 440 (483)
|. .+....+.+|.+|++. |+++.++......++..+++...+.+.+..||+..|++.++.++++.
T Consensus 117 g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 117 GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL 185 (475)
T ss_pred ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 43 2344567778888764 88899988888888888888888877777789988888776555543
No 213
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.23 E-value=7.7e-06 Score=82.07 Aligned_cols=138 Identities=15% Similarity=0.110 Sum_probs=90.5
Q ss_pred CcccccchhhHHHHHH-HHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHH---Hhh-ccHHHHHHHH----HHhh
Q psy6142 23 DVKINYIQASWIGSLM-PLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI---ALA-NGVPMILAGR----CVAG 93 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~-~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~---~~a-~~~~~l~~~R----~l~G 93 (483)
+.+.+..+.++..+.. ..+..+|.++.|++.||+|||+.+..+.++..+..+.. ++. ++.+.+.++= +..|
T Consensus 239 ~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (402)
T PRK11902 239 GAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGG 318 (402)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 3556666777776544 45688999999999999999999887777666554433 344 4555554443 5667
Q ss_pred hcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhhhhHHHHHHhhHHHHHHHHH
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLIC 160 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~ 160 (483)
++.+...+....++.|..|.+.++......+.....+..++..+....+|+..+.....+.++..+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 319 MGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 7777788888889999999887766544443333322223333334567887777766555444333
No 214
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.23 E-value=0.00014 Score=75.18 Aligned_cols=120 Identities=18% Similarity=0.088 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhh
Q psy6142 307 VNLLSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLM 384 (483)
Q Consensus 307 ~~~~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~ 384 (483)
......+++|++.|| +|||+.++.+.+...++...+.. ... ..+...+.. ...+.+.|. .+....+
T Consensus 69 ~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~----~~~------~~~~l~~~~--~l~gig~g~~~~~~~~l 136 (500)
T PRK09584 69 LVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW----SGH------DAGIVYMGM--ATIAVGNGLFKANPSSL 136 (500)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH----hcc------cHHHHHHHH--HHHHHhhhcccCCHHHH
Confidence 333445689999999 59999998887666655433321 110 011122222 233344443 2344467
Q ss_pred hcccCCccc--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHH
Q psy6142 385 MGEILPAKI--RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLV 438 (483)
Q Consensus 385 ~~Ei~P~~~--R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i 438 (483)
.+|.+|++. |..+.++.+....++..+++...+.+.+..||++.|++.++..++
T Consensus 137 ~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 137 LSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 789998654 445677767777788888888888888888999999876654444
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.20 E-value=1.2e-05 Score=77.61 Aligned_cols=117 Identities=10% Similarity=0.039 Sum_probs=90.4
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
++.+..+.++..+.+..+.++|.++.+++.||+|+||.+..+..+..++.++....++... ..+=++.|++.+..++..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 4677888899999999999999999999999999999999888888887776666655433 235558899999999999
Q ss_pred hhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhhh
Q psy6142 104 PVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLN 142 (483)
Q Consensus 104 ~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~ 142 (483)
.+...|..|++ .+...++..+....|.+.+.+.|...+
T Consensus 252 ~s~a~~~~~~~-~~~asai~~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 252 FSLALNALGRH-TSQGSGILCLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHhhhhhh-hhhhHHHHHHHHhcchHHHHHHHHHHH
Confidence 99998888765 345555555444445566666776654
No 216
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.19 E-value=1.7e-05 Score=79.32 Aligned_cols=114 Identities=16% Similarity=0.125 Sum_probs=89.7
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccch
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
++.+..+.++..+.+.+|..+|+++.+++.||+++|+.+..+.+ ..+..++.++.++++...+.-++.|++.+...+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhH
Confidence 45667788888899999999999999999999999998887753 34444455667777777888889999998888878
Q ss_pred hhhhcccCCCCc-cchhchHhHHHHHHHHHHHHHhh
Q psy6142 104 PVYLGETVQPEV-RGTLGLLPTFLGNIGILTCFIAG 138 (483)
Q Consensus 104 ~~~i~E~~p~~~-Rg~~~~~~~~~~~~g~~~~~~~g 138 (483)
.+.+.|..|++. +|+..++.+....++..++..+.
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 888888877665 78887777777777765554443
No 217
>KOG0253|consensus
Probab=98.17 E-value=4.6e-06 Score=78.82 Aligned_cols=127 Identities=19% Similarity=0.157 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccc
Q psy6142 38 MPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRG 117 (483)
Q Consensus 38 ~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg 117 (483)
-.+.-+-|.++.+++.||+|||+++-++.+++.++.++.....+-..+.+.-|..-+.+.+...+.++|.-|..|...|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34667889999999999999999999999999999998888766554433334444445666677889999999999999
Q ss_pred hhchHhHHHHHHHHHHHHHhhhhhhhH---HHHHHhhHHHHHHHHHHhcCc
Q psy6142 118 TLGLLPTFLGNIGILTCFIAGTFLNWY---QLAFFGACIPVPFLICMFLIP 165 (483)
Q Consensus 118 ~~~~~~~~~~~~g~~~~~~~g~~~~w~---~~~~~~~~~~~~~~~~~~~~p 165 (483)
...+.-+...-+|.++.+.++...+-. .++..+. ..++..++..++|
T Consensus 470 tgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~-~~ilagIavcffP 519 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGA-LFILAGIAVCFFP 519 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHH-HHHHHHHHheeee
Confidence 976666666666666666555443321 2222222 2333444556666
No 218
>PRK09848 glucuronide transporter; Provisional
Probab=98.16 E-value=2.3e-05 Score=79.85 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc--cHHHHHHHHHHhhhcccccccchhhhhccc
Q psy6142 33 WIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN--GVPMILAGRCVAGFCVGIASLALPVYLGET 110 (483)
Q Consensus 33 ~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~--~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~ 110 (483)
+......++.+++.++++++.||+|+|+++..+.++..++.++..+.+ +++.+.+.-++.|+|.+...+...+...|.
T Consensus 268 ~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~ 347 (448)
T PRK09848 268 LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADT 347 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333334677888999999999999999999999998888887777754 567777888999999999999999999998
Q ss_pred CCCC-------ccchhchHhHHHHHHHHHHH
Q psy6142 111 VQPE-------VRGTLGLLPTFLGNIGILTC 134 (483)
Q Consensus 111 ~p~~-------~Rg~~~~~~~~~~~~g~~~~ 134 (483)
.|.+ .+|...++.++...+|..++
T Consensus 348 ~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 348 VEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred hhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 8765 34777777777766665443
No 219
>KOG3098|consensus
Probab=98.15 E-value=0.0015 Score=65.30 Aligned_cols=88 Identities=9% Similarity=0.013 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCC
Q psy6142 35 GSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPE 114 (483)
Q Consensus 35 ~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~ 114 (483)
.++...--.+.+++.+.+-|+.|-|..+.++...+...-+..-+ +|-+.+.++=.+.|+|.+..+.....|.+|.++++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 45566667788999999999999999999999999888777655 45667888999999999999999999999999999
Q ss_pred ccchhchHh
Q psy6142 115 VRGTLGLLP 123 (483)
Q Consensus 115 ~Rg~~~~~~ 123 (483)
.+.+..++.
T Consensus 135 tie~Nisi~ 143 (461)
T KOG3098|consen 135 TIERNISIF 143 (461)
T ss_pred hHHHHHHHH
Confidence 888866544
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.14 E-value=2.5e-05 Score=78.04 Aligned_cols=131 Identities=18% Similarity=0.085 Sum_probs=88.3
Q ss_pred CCcccccchhhHHHHHHH-HHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh------hccHHHHHHHHHHhhh
Q psy6142 22 DDVKINYIQASWIGSLMP-LSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL------ANGVPMILAGRCVAGF 94 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~-~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~------a~~~~~l~~~R~l~G~ 94 (483)
+|.+.+.++.++...... .+..+|.++.|++.||+|||+.+..+.++..+..+.... .++...+...-.++++
T Consensus 236 ~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
T TIGR02718 236 VDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSL 315 (390)
T ss_pred HhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHH
Confidence 456777788888777664 577889999999999999999998877665333332221 2344455566667777
Q ss_pred cccccccchhhhhcccCCC-CccchhchHhHHHHHHHHHHHHH-hhhhhh---hHHHHHHhhH
Q psy6142 95 CVGIASLALPVYLGETVQP-EVRGTLGLLPTFLGNIGILTCFI-AGTFLN---WYQLAFFGAC 152 (483)
Q Consensus 95 ~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~~~~~g~~~~~~-~g~~~~---w~~~~~~~~~ 152 (483)
+.|...+....++.+..++ +.+|+..+..+....+|..+++. .|...+ ++..+.....
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~ 378 (390)
T TIGR02718 316 ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTV 378 (390)
T ss_pred HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 7777777777777777766 88899877777776777554443 344443 4444544333
No 221
>PRK10133 L-fucose transporter; Provisional
Probab=98.13 E-value=1.5e-05 Score=80.91 Aligned_cols=117 Identities=12% Similarity=-0.030 Sum_probs=90.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
..+.+..+.++....+.++.++|.++.|++.||+|||+++..+.++..++.++..+.++.. -..+=++.|++.+..++.
T Consensus 289 ~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~ 367 (438)
T PRK10133 289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPT 367 (438)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHH
Confidence 3577788888899999999999999999999999999999998888777777666666643 345667899999999999
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL 141 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~ 141 (483)
..+...|..|++ .+...++.......+.+.+++.|...
T Consensus 368 ~~s~a~~~~~~~-~~~as~l~~~~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 368 IFSLGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVS 405 (438)
T ss_pred HHHHHHcccchh-hccchhHHhHHhccchHHHHHHHHHH
Confidence 999999998764 55555555544444555666666543
No 222
>PTZ00207 hypothetical protein; Provisional
Probab=98.12 E-value=0.0001 Score=76.44 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=77.7
Q ss_pred HHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhccc
Q psy6142 310 LSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEI 388 (483)
Q Consensus 310 ~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei 388 (483)
...+.+|++.||+|||++++++.+...++.+..+.... . .. ....+...+.. ...|.+.+.. +.......+.
T Consensus 76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~--~--~i-~~s~~~l~l~r--~l~G~G~~~~~~~~~~~i~~~ 148 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQ--E--VI-EGSVVRLSVYN--GLMTLGCMLFDLGAVVTVLSV 148 (591)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc--c--cc-cCcHHHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Confidence 34557899999999999999998877776655443211 0 00 01112222222 2334443322 2233456678
Q ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcc
Q psy6142 389 LPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVP 448 (483)
Q Consensus 389 ~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lp 448 (483)
|| +.||.+.|+......+++.+.+........ .++...|++.++..++..++.+.+++
T Consensus 149 Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 149 FP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred Ch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 87 789999999988877777766555544333 24566677777766665555555443
No 223
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.10 E-value=1.6e-05 Score=81.20 Aligned_cols=118 Identities=13% Similarity=0.061 Sum_probs=97.7
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh----------ccHHHHHHHHHH
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA----------NGVPMILAGRCV 91 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a----------~~~~~l~~~R~l 91 (483)
++.+.+..+.+.+.....++.++|..+.+++.+|++.|+++.++.++..++.+...+. ++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4677888899999998999999999999999999999999999999999888664311 344456667789
Q ss_pred hhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 92 AGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 92 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
++++.+........++.|.+|++.+|..-++.+....+|..++...+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999877777777777665555443
No 224
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.06 E-value=1.6e-05 Score=78.18 Aligned_cols=118 Identities=15% Similarity=0.095 Sum_probs=84.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESL-GRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
|.+.+..+.++..+.+.++.++|+++.|++.||+ +||+.+..+..+..++.++..+.++..... .-++.|++.|...+
T Consensus 226 ~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~ 304 (355)
T TIGR00896 226 SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFP 304 (355)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhH
Confidence 4456677888899999999999999999999999 577777788888888877777766544332 45788999999888
Q ss_pred chhhhhc-ccCCCCccchhchHhHHHHHHHH-HHHHHhhhhh
Q psy6142 102 ALPVYLG-ETVQPEVRGTLGLLPTFLGNIGI-LTCFIAGTFL 141 (483)
Q Consensus 102 ~~~~~i~-E~~p~~~Rg~~~~~~~~~~~~g~-~~~~~~g~~~ 141 (483)
...+.+. +..++++++...++.+....+|. +.+.+.|...
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 305 LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777765 44455667776666555444443 3344444443
No 225
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.04 E-value=5.1e-05 Score=77.88 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=75.6
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh-----hccHHHHHHHHHHhhhcccccccch
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL-----ANGVPMILAGRCVAGFCVGIASLAL 103 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~-----a~~~~~l~~~R~l~G~~~g~~~~~~ 103 (483)
...+++.++..++.+++.+++++++||+|||+.+.++.++..++.+...+ ..+.+.+.+.=++.|++.+......
T Consensus 266 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 266 DLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666888999999999999999999999888877766655433 3456677778888999999999999
Q ss_pred hhhhcccCCCC-------ccchhchHhHHHHHHHH
Q psy6142 104 PVYLGETVQPE-------VRGTLGLLPTFLGNIGI 131 (483)
Q Consensus 104 ~~~i~E~~p~~-------~Rg~~~~~~~~~~~~g~ 131 (483)
++++.|..+.+ ..|...+..++..-+|.
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH
Confidence 99999997632 22334455555444443
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=98.04 E-value=5.7e-05 Score=76.86 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHh--hccHHHHHHHHHHhhhcccccccchhhhhcc
Q psy6142 32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIAL--ANGVPMILAGRCVAGFCVGIASLALPVYLGE 109 (483)
Q Consensus 32 ~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~--a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E 109 (483)
+++.....+..+++.+++++++||+|||+.+..+.+...++.+...+ .++.+.+.+..++.|++.+...+..++.+.|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555567788899999999999999999999888776654443333 3467778888999999999999999999998
Q ss_pred cCCCC-------ccchhchHhHHHHHHHHH
Q psy6142 110 TVQPE-------VRGTLGLLPTFLGNIGIL 132 (483)
Q Consensus 110 ~~p~~-------~Rg~~~~~~~~~~~~g~~ 132 (483)
..+.+ ..|...+..+.+.-+|..
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~a 376 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLA 376 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHH
Confidence 88632 223344455444445543
No 227
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.01 E-value=2.8e-05 Score=82.28 Aligned_cols=155 Identities=13% Similarity=0.043 Sum_probs=94.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccC-----------------------C
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKST-----------------------G 352 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~-----------------------~ 352 (483)
+..+......++..++.++.+++.||.|||+.+.++.+++.++.+..+...+.... .
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~ 148 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMEN 148 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCC
Confidence 34455566678888999999999999999999988887777766554433211000 0
Q ss_pred CC--------------ccc-cchHHHHHHHHHHHHHhcccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 353 SD--------------VSE-LGWLPLLSFVVYVIGFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 353 ~~--------------~~~-~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
.. ... ......+....+..|.+.+.. +....++.|.+|++.|+...++......++..++..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llg 228 (633)
T TIGR00805 149 LTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLG 228 (633)
T ss_pred CCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHH
Confidence 00 000 001122223344445544432 44567889999999999999998887777777666555
Q ss_pred HHHHHHh---------------------C-cchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 417 NDLTALL---------------------G-THGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 417 ~~~~~~~---------------------g-~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
+.+.+.. | |+..|++.+++.++..+. ++++|++.
T Consensus 229 g~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~l 284 (633)
T TIGR00805 229 SFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKAL 284 (633)
T ss_pred HHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCcccc
Confidence 5444321 1 444566666666654443 44566653
No 228
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.95 E-value=0.0002 Score=69.42 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 378 (483)
+...+-.+...+.-+.-+++.||+|.|+....+.++..+-++.++..... +++ +..++... ..|++-+..
T Consensus 53 ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~------~~~--~~ll~~gl--l~G~~GasF 122 (417)
T COG2223 53 LLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY------PST--WQLLVIGL--LLGLAGASF 122 (417)
T ss_pred HHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC------Cch--HHHHHHHH--HHhccccee
Confidence 44444455556667889999999999999888766555544443332211 111 22222111 122222222
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhC---cchhHHHHHHHHHHHHHHhhhhc
Q psy6142 379 SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLG---THGAFWLFGVVCLVGLFFVIIFV 447 (483)
Q Consensus 379 ~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~f~i~~~~~~i~~i~~~~~l 447 (483)
.+.-.++++-||++.+|.+.|++. .+++|..+.....|.+....+ |+.+..++....++..+..+++.
T Consensus 123 av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 123 AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334457889999999999999999 888999888888888887778 88888888888777766666554
No 229
>KOG2816|consensus
Probab=97.93 E-value=6e-05 Score=76.00 Aligned_cols=140 Identities=22% Similarity=0.271 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhh
Q psy6142 303 IVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPW 382 (483)
Q Consensus 303 ~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 382 (483)
..++..++.++.-|.+.||+|||..+........+....+.... .|..+ .....|.-....+...
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~------------~~~~~---~~~l~g~~~~~~s~~~ 134 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG------------YWFFL---LLGLSGGFSAIFSVGF 134 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH------------HHHhh---hcccccchhhhhhhhh
Confidence 45777889999999999999999998877655554443332211 11111 1111111122223446
Q ss_pred hhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHH
Q psy6142 383 LMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLED 457 (483)
Q Consensus 383 ~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~e 457 (483)
.+.+++...+.|....++....-+.+..+++..........|...+|++.++..+++.+...+++||+...+.++
T Consensus 135 a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 135 AYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred hheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 788899999999999999988777788888888888888888888999999999999888889999987665443
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.93 E-value=3.8e-05 Score=77.73 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=87.0
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc--cHHHHHHHHHHhhhcccccccchhhh
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN--GVPMILAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~--~~~~l~~~R~l~G~~~g~~~~~~~~~ 106 (483)
...++...+..++..++.+++++++||+|||+++..+.+++.++.++..+.+ |.+.+.+.-++.|++.|......+++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 4566777788999999999999999999999999999999999999988886 99999999999999999999999999
Q ss_pred hcccCCCCc-------cchhchHhHHHHHHHH
Q psy6142 107 LGETVQPEV-------RGTLGLLPTFLGNIGI 131 (483)
Q Consensus 107 i~E~~p~~~-------Rg~~~~~~~~~~~~g~ 131 (483)
+.|..+.++ .|...+..++..-+|.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 999997442 3444555555544443
No 231
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.92 E-value=0.00095 Score=66.70 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
+...-....+..+..+.++++.||+|-|+.+..+.+...+.....+..-. ...+....+..|.+-|.
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S-------------l~~L~i~R~llGvaEA~ 131 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS-------------VWHMQLMEVFYSVTMAA 131 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHH
Confidence 44556667788899999999999999999998887666655554433110 11222233334444443
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHH---HHHHHHHHHHHHhhhhccc
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFW---LFGVVCLVGLFFVIIFVPE 449 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~---i~~~~~~i~~i~~~~~lpe 449 (483)
....+.++..-+|++.|+++.|+......+|.++++.+.+. ....||++-.. +-.....++++++ +++|.
T Consensus 132 ~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a-~~LP~ 204 (511)
T TIGR00806 132 RIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLA-LFLKR 204 (511)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 33445688899999999999999988888888888877766 34457765333 2222233344433 46774
No 232
>KOG2504|consensus
Probab=97.91 E-value=2.5e-05 Score=79.98 Aligned_cols=143 Identities=22% Similarity=0.247 Sum_probs=116.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccc--hhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLG--RRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~G--Rr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
..+.++.+.+.+.++..+...+|.++.|+++|+.. ++..+.++++...++.+.+.++++++.+++.-.+-|+..|...
T Consensus 327 ~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~ 406 (509)
T KOG2504|consen 327 SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFS 406 (509)
T ss_pred hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 55677888999999999999999999999999999 6667888888889999999999999999999999999999999
Q ss_pred cchhhhhcccCCCCccchhchHhHHHHHHHHHHH-HHhhhhh----hhHHHHHHhhHHHHHHHHHHhcCc
Q psy6142 101 LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTC-FIAGTFL----NWYQLAFFGACIPVPFLICMFLIP 165 (483)
Q Consensus 101 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~-~~~g~~~----~w~~~~~~~~~~~~~~~~~~~~~p 165 (483)
...+..+.|..+.++-..+-++..++..++.+.+ ++.|... +|...++.+....++....+++.|
T Consensus 407 ~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 407 SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9998999999999988887777777777776554 4445333 355566666655555555555554
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.82 E-value=0.00027 Score=71.68 Aligned_cols=154 Identities=11% Similarity=0.058 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh----cccchHHHHHH-hHHHHHHHHHHHHHHhhc---cCCCCccccchH---HHHHH
Q psy6142 298 NYCTIIVGVVNLLSVLIATALID----RLGRKILLYIS-STAMILTLATLGTFFYFK---STGSDVSELGWL---PLLSF 366 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvd----r~GRr~~l~~~-~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~---~~~~~ 366 (483)
........+..++..++.|++.| |+|||+.++.+ .+...+++..+....... ....+..+..+. .++.+
T Consensus 42 ~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 121 (477)
T TIGR01301 42 SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGF 121 (477)
T ss_pred HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHH
Confidence 44556667888899999999999 59999988764 333333333322110000 000000011111 11111
Q ss_pred HHHHHHHhccccchhhhhhcccCCccch--hhhhHHHHHHHHHHHHHHHHHHHHH--HHHh-------------CcchhH
Q psy6142 367 VVYVIGFSIGFGSIPWLMMGEILPAKIR--GSAASLATAFNWTCTFIVTKTFNDL--TALL-------------GTHGAF 429 (483)
Q Consensus 367 ~l~~~~~~~g~~~~~~~~~~Ei~P~~~R--~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~-------------g~~~~f 429 (483)
.+.-+..+.... ..-.+++|++|++.| +.+.++.+.+..+|..++....... .... +.+..|
T Consensus 122 ~lld~~~n~~~~-p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F 200 (477)
T TIGR01301 122 WILDVANNMLQG-PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCF 200 (477)
T ss_pred HHHHHHHHHHHH-HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHH
Confidence 111122222222 224578899999876 4677766666656665555433322 1111 346678
Q ss_pred HHHHHHHHHHHHHhhhhcccCCC
Q psy6142 430 WLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 430 ~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
++-+++.+++.++.++..+|..-
T Consensus 201 ~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 201 LIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHeeeeeccCC
Confidence 88888888888888888888653
No 234
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00052 Score=68.57 Aligned_cols=83 Identities=23% Similarity=0.255 Sum_probs=73.4
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhc--cHHHHHHHHHHhhhcccccccchhhhh
Q psy6142 30 QASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALAN--GVPMILAGRCVAGFCVGIASLALPVYL 107 (483)
Q Consensus 30 ~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~--~~~~l~~~R~l~G~~~g~~~~~~~~~i 107 (483)
...+....+..+..++.+++..+++|+|||+++.++.++..++.++.-+.+ +...+++..++.+++.+...+..++.+
T Consensus 273 ~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~ 352 (467)
T COG2211 273 FAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMV 352 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHh
Confidence 344555667777888899999999999999999999999999999998876 788999999999999999999999999
Q ss_pred cccCC
Q psy6142 108 GETVQ 112 (483)
Q Consensus 108 ~E~~p 112 (483)
.|...
T Consensus 353 ~d~vD 357 (467)
T COG2211 353 ADTVD 357 (467)
T ss_pred cchhh
Confidence 88763
No 235
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.67 E-value=0.00041 Score=58.93 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=80.9
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchh
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALP 104 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~ 104 (483)
+++....-...++......+.+++.+.+.+++|.|+.++++.+.+.+..... +-++.+.++.+-.+.|++.+.......
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 3444444455566777778888999999999999999999999998666554 667788999999999999999999999
Q ss_pred hhhcccCCCCccchhchH
Q psy6142 105 VYLGETVQPEVRGTLGLL 122 (483)
Q Consensus 105 ~~i~E~~p~~~Rg~~~~~ 122 (483)
.|+.|...++.|++..++
T Consensus 112 ~ylt~~s~~~~~~~~~~i 129 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGI 129 (156)
T ss_pred HHHHHcCCHHHHhhHHHH
Confidence 999999999999886544
No 236
>KOG4332|consensus
Probab=97.65 E-value=0.0012 Score=60.15 Aligned_cols=74 Identities=20% Similarity=0.378 Sum_probs=54.1
Q ss_pred HHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhh-hhcccCCCCccch
Q psy6142 42 ALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPV-YLGETVQPEVRGT 118 (483)
Q Consensus 42 ~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~-~i~E~~p~~~Rg~ 118 (483)
.++-..+.|.++||-|||+..+.-++.++++.+ +-.+|++-+++++|.+.|++.+......-+ ++.|.- ++|+.
T Consensus 85 smLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~F 159 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN--EKRGF 159 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh--hccCC
Confidence 344445567899999999987766666666543 457899999999999999998876655544 467774 45554
No 237
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.64 E-value=0.016 Score=61.40 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=83.0
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHhhHHHHHHHHHHHhhcc--------HHHHHHHHHHhhh
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIE-SLGRRTTILSTGLPFIVSFLLIALANG--------VPMILAGRCVAGF 94 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D-~~GRr~~l~~~~~l~~~~~~l~~~a~~--------~~~l~~~R~l~G~ 94 (483)
.+.++.+...+...+..-.-+-.+++|+++| ++||++++.++.+++.+|..+.+++.. ....+++=.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 4455666666777777778888999999999 569999999999999999988887532 2346788889999
Q ss_pred cccccccchhhhhcccCCCCccchhc---hHhHHHHHHHHHHH
Q psy6142 95 CVGIASLALPVYLGETVQPEVRGTLG---LLPTFLGNIGILTC 134 (483)
Q Consensus 95 ~~g~~~~~~~~~i~E~~p~~~Rg~~~---~~~~~~~~~g~~~~ 134 (483)
|.|+.-++..+...|..+++.+.+.- .+.-.+..+|.+++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis 140 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLIS 140 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888766544333 33333444454443
No 238
>KOG0252|consensus
Probab=97.64 E-value=0.00027 Score=69.19 Aligned_cols=97 Identities=25% Similarity=0.263 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
...+....++++.|.++.|++.||+|||++....+++++++.++.+.... . ....+-...+.+..+.+|+|+|.
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~--~----~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG--T----TSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC--C----CCCcchhhHHHHHHHHhhccccC
Confidence 35677778899999999999999999999997777766666653332211 1 11123344555556667777765
Q ss_pred c-chhhhhhcccCCccchhhhhHH
Q psy6142 378 G-SIPWLMMGEILPAKIRGSAASL 400 (483)
Q Consensus 378 ~-~~~~~~~~Ei~P~~~R~~~~s~ 400 (483)
- |+...+++|.--.+-||.-.+.
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaa 184 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAA 184 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEE
Confidence 3 7888899999888889877664
No 239
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.62 E-value=0.00076 Score=67.27 Aligned_cols=105 Identities=22% Similarity=0.263 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh-ccHHHH----HHHHHHhhhcccccccchhhh
Q psy6142 32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA-NGVPMI----LAGRCVAGFCVGIASLALPVY 106 (483)
Q Consensus 32 ~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a-~~~~~l----~~~R~l~G~~~g~~~~~~~~~ 106 (483)
+...++..+.-..--.+.+++..|+|-|+++.++.+.+++=..+.++. ++.+.. +.+-.++|+..|........|
T Consensus 246 g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~y 325 (400)
T PF03825_consen 246 GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRY 325 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 333444444555666788999999999999999999999998888887 555543 334567999999999999999
Q ss_pred hcccCCCCccchhchHhHHH-HHHHHHHHHH
Q psy6142 107 LGETVQPEVRGTLGLLPTFL-GNIGILTCFI 136 (483)
Q Consensus 107 i~E~~p~~~Rg~~~~~~~~~-~~~g~~~~~~ 136 (483)
+.|.+|++.|++.-++.... ..+|..++..
T Consensus 326 i~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ 356 (400)
T PF03825_consen 326 IDRIAPPELRATAQGLYSALSFGLGGAIGSL 356 (400)
T ss_pred HHHhCCccchHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999987765543 4556555443
No 240
>PRK11462 putative transporter; Provisional
Probab=97.58 E-value=0.0011 Score=67.83 Aligned_cols=82 Identities=16% Similarity=0.049 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhcc--HHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 31 ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG--VPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 31 ~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~--~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
.++....+.++.++|.+++++++||+|||+++..+..+..+..++..+.++ ...+.+.=++.|++.+...+..++.+.
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778888999999999999999999987666555554444444333 223445556778887777766677777
Q ss_pred ccCC
Q psy6142 109 ETVQ 112 (483)
Q Consensus 109 E~~p 112 (483)
|...
T Consensus 345 d~~d 348 (460)
T PRK11462 345 DTVD 348 (460)
T ss_pred HhHh
Confidence 7665
No 241
>KOG3762|consensus
Probab=97.50 E-value=7.8e-05 Score=74.19 Aligned_cols=133 Identities=14% Similarity=0.021 Sum_probs=103.1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
+|......-.+........|-.+--++.+++.+|+||.+++.+++...++=-+..++.+|.|+.+-..++||+..+..+.
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWa 478 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWA 478 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHH
Confidence 34444444555666677888888999999999999999999999999999889999999999999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHH-----HHHHHHHHHHhhhhhhhHHHHHHhhHHH
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFL-----GNIGILTCFIAGTFLNWYQLAFFGACIP 154 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~-----~~~g~~~~~~~g~~~~w~~~~~~~~~~~ 154 (483)
++.+|++...||+.|..+-++.+.. -++|.+++...-..++-|..+.+..+..
T Consensus 479 a~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 479 AIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIAC 536 (618)
T ss_pred HHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHH
Confidence 9999999999999998875544332 3344444443333445566666544433
No 242
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.47 E-value=0.0011 Score=65.43 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=96.8
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 29 IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 29 ~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
.-.+.+.++-.+.-++.-.+.+++-+|+|-|+.++++.+++++=.+++++++|.+.+.+.+.+.|+..+.......-|+.
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~ 338 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYIT 338 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666777777788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhchH-hHHHHHHHH-HHHHHhhhhh---hhHHHHHHhhHHHHHHH
Q psy6142 109 ETVQPEVRGTLGLL-PTFLGNIGI-LTCFIAGTFL---NWYQLAFFGACIPVPFL 158 (483)
Q Consensus 109 E~~p~~~Rg~~~~~-~~~~~~~g~-~~~~~~g~~~---~w~~~~~~~~~~~~~~~ 158 (483)
+.+|+|...+.-.+ .++...+|. +...+.|... +.+..+++-+.+.+++.
T Consensus 339 ~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 339 AHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHH
Confidence 99999876654333 344555553 3445555544 34545544343443333
No 243
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.46 E-value=0.047 Score=53.84 Aligned_cols=124 Identities=18% Similarity=0.127 Sum_probs=77.1
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccch
Q psy6142 39 PLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGT 118 (483)
Q Consensus 39 ~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~ 118 (483)
.+-.++--++..++.+|.-.+.=.....+++.+|-++.++++|.++=+++=.+.+++.|..-...-.+.. ..|+..-+.
T Consensus 69 i~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~~l~~ 147 (402)
T PF02487_consen 69 ILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKSSLSA 147 (402)
T ss_pred HHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCcccccc
Confidence 3445555667888888776555566777788889999999999999999999999998887776666644 555544333
Q ss_pred hchHhHHHHHHHHHHHHHhhh-hhhhHHHHHHhhHHHHHHHHHHhc
Q psy6142 119 LGLLPTFLGNIGILTCFIAGT-FLNWYQLAFFGACIPVPFLICMFL 163 (483)
Q Consensus 119 ~~~~~~~~~~~g~~~~~~~g~-~~~w~~~~~~~~~~~~~~~~~~~~ 163 (483)
.++-.+.+..+|...-..+-. -++-|........+++..++.+++
T Consensus 148 wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 148 WSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred ccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 343344444444433322222 122354444444455444444443
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.0034 Score=60.81 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=88.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
+..........+.+++++.++++++|+|+|+-++.|..++.+.+.+.. .... . ..+ -.....+|..+.|+
T Consensus 49 ~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~----pAa~----~-~~y-~~FL~~lFila~Gi 118 (422)
T COG0738 49 EASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW----PAAS----S-KSY-GFFLVALFILASGI 118 (422)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHh----hhhh----h-hhH-HHHHHHHHHHHhhh
Confidence 455677777888999999999999999999999988776666554321 1110 0 011 22233345667777
Q ss_pred ccc-chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-------------------HhCcchhHHHHHHH
Q psy6142 376 GFG-SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA-------------------LLGTHGAFWLFGVV 435 (483)
Q Consensus 376 g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~f~i~~~~ 435 (483)
+.- +....+++.+.|++....-+.+...++-+|.++++.....+.. ...++.+|...+..
T Consensus 119 ~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~ 198 (422)
T COG0738 119 GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGL 198 (422)
T ss_pred HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 753 3445688888888777777778888877777777766554433 12256677766665
Q ss_pred HHHH
Q psy6142 436 CLVG 439 (483)
Q Consensus 436 ~~i~ 439 (483)
+.+.
T Consensus 199 lvll 202 (422)
T COG0738 199 LVLL 202 (422)
T ss_pred HHHH
Confidence 5543
No 245
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.25 E-value=0.0011 Score=49.60 Aligned_cols=64 Identities=22% Similarity=0.220 Sum_probs=59.0
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHH
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMI 85 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l 85 (483)
+|...+..+.+|+.+..++|-.+|++...++.++..+++.+..+.+..++..+.+++.++++..
T Consensus 20 ~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 20 ADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 4566899999999999999999999999999999999999999999999999999999988754
No 246
>KOG0637|consensus
Probab=97.19 E-value=0.0022 Score=62.92 Aligned_cols=111 Identities=21% Similarity=0.331 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhhhhhhhh----ccchhHHHHHhhHHHH-HHHHHHHhhccHHHH-----------------HHHHHHhh
Q psy6142 36 SLMPLSALFGGMAGGPLIE----SLGRRTTILSTGLPFI-VSFLLIALANGVPMI-----------------LAGRCVAG 93 (483)
Q Consensus 36 s~~~~g~~lG~~~~G~l~D----~~GRr~~l~~~~~l~~-~~~~l~~~a~~~~~l-----------------~~~R~l~G 93 (483)
-..++-.++-+++-|..+| ||||||.++.+..+.+ ++-++..++.++..+ +++=-+-=
T Consensus 74 ~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD 153 (498)
T KOG0637|consen 74 LCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLD 153 (498)
T ss_pred cccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHH
Confidence 3445666777888999999 7999999998876554 455567777655432 33333333
Q ss_pred hcccccccchhhhhcccCCCCccch-hchHhHHHHHHHHHHHHHhhhhhhhHHH
Q psy6142 94 FCVGIASLALPVYLGETVQPEVRGT-LGLLPTFLGNIGILTCFIAGTFLNWYQL 146 (483)
Q Consensus 94 ~~~g~~~~~~~~~i~E~~p~~~Rg~-~~~~~~~~~~~g~~~~~~~g~~~~w~~~ 146 (483)
++.-.....+-++..|.+-++.+.+ +++....+..+|..+++.+|.+.+|+..
T Consensus 154 ~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~ 207 (498)
T KOG0637|consen 154 VANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKI 207 (498)
T ss_pred hhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEE
Confidence 4444555667888888887776666 8999999999999999999988887643
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.19 E-value=0.00059 Score=50.44 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=43.4
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHH
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPF 69 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~ 69 (483)
++.+.+..|.+.+.++..+-.+++.+++|+++||+||++..+.....+
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 468899999999999999999999999999999999999988776554
No 248
>KOG2533|consensus
Probab=97.11 E-value=0.0068 Score=61.84 Aligned_cols=143 Identities=16% Similarity=0.025 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 377 (483)
+.......++.+++-+.++++.||++-.+.+... .++..+++...+... ..+..+..-++.++.-+.++
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~----~~~w~~~~~~~~~~~-------s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVS----GILWGLFGFLTAAVH-------SFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHH----HHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHhcccc
Confidence 4556777788889999999999999955544332 222222222221111 11222333333334334443
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH------HHHhCcchhHHHHHHHHHHHHHHhhhhcccCC
Q psy6142 378 GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDL------TALLGTHGAFWLFGVVCLVGLFFVIIFVPETQ 451 (483)
Q Consensus 378 ~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~ 451 (483)
|..-.+++--|..+.|+.-+++-.+...++++.++.+...+ ....||++.|.+-+++.++..+++++++|+-.
T Consensus 153 -P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 153 -PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred -hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 44446777889999999999998877667776666554443 23458999999999999988888889999753
Q ss_pred C
Q psy6142 452 G 452 (483)
Q Consensus 452 ~ 452 (483)
.
T Consensus 232 ~ 232 (495)
T KOG2533|consen 232 S 232 (495)
T ss_pred h
Confidence 3
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.95 E-value=0.01 Score=59.24 Aligned_cols=122 Identities=21% Similarity=0.184 Sum_probs=79.0
Q ss_pred HHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhhhhcc
Q psy6142 310 LSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWLMMGE 387 (483)
Q Consensus 310 ~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~E 387 (483)
..++++|+++|| .|+|+.++.|.+++.++.++++... ..+ . ....+.+ ..+..|.|.. +-+....+|
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~~~----~--~gl~i~L--~~I~iG~Gl~K~NiS~llg~ 144 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---VSG----P--GGLYIGL--ALIIVGTGLFKPNISSLLGE 144 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---ccc----c--cHHHHHH--HHHHhccccccccHHHHHHH
Confidence 567889999999 5999999999888887776664321 011 0 1122222 2333444443 444567778
Q ss_pred cCCccc--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHH
Q psy6142 388 ILPAKI--RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFF 442 (483)
Q Consensus 388 i~P~~~--R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~ 442 (483)
++|++. |-.+.++-.....+|+++.+...+.+.+..|++..|-..++-...+++.
T Consensus 145 ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 145 LYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred hcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 887554 4444444444445778888888888888889998888877777776554
No 250
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.89 E-value=0.022 Score=52.55 Aligned_cols=112 Identities=17% Similarity=0.209 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 378 (483)
......+++.-+ ++.+|.+.||+|.|..+++|.+...++...+-... ... .+...-| .+..+.+..+.+.++.
T Consensus 41 ~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~--~~~--i~~~~~~--~~~~~~~l~~~s~~~~ 113 (250)
T PF06813_consen 41 TLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV--SGR--IPSLPVW--LMCLFLFLGGNSSCWF 113 (250)
T ss_pred HHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH--hCc--cCccchH--HHHHHHHHHcccHHHh
Confidence 344445666655 47889999999999999999887777665443222 111 1111122 2233333344444332
Q ss_pred chh-hhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Q psy6142 379 SIP-WLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFND 418 (483)
Q Consensus 379 ~~~-~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~ 418 (483)
-+. .....+-|| +.||++.|+.-.+.-+.+.+.+.....
T Consensus 114 ~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 114 NTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred hhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH
Confidence 222 223346788 479999999877766666666655443
No 251
>KOG4686|consensus
Probab=96.74 E-value=0.0064 Score=56.00 Aligned_cols=128 Identities=13% Similarity=0.003 Sum_probs=90.6
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHH-HHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFL-LIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~-l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
.++.|+.+.+-+.|....-...-++++|.++||+||+-..+.+..+..+.+= ...|+ .+.=.++-.+.|+.......
T Consensus 294 rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAc 371 (459)
T KOG4686|consen 294 RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLAC 371 (459)
T ss_pred hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHH
Confidence 4667777777777777777788899999999999999988887766554432 23332 22224566788888888777
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh-hhh------hhhHHHHHHhhH
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA-GTF------LNWYQLAFFGAC 152 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~-g~~------~~w~~~~~~~~~ 152 (483)
..+-.+.-..|.++-|+.-...+.-..+|....+++ |.+ ..|...++.++.
T Consensus 372 slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 372 SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 778888888999999998888888888875544443 332 246666665443
No 252
>KOG2325|consensus
Probab=96.71 E-value=0.034 Score=56.00 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccc-hHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGR-KILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GR-r~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 376 (483)
++..-...++..+++++.++=-.|.|. |+.++.|.+++.++...-..+.+..+ . +..++....+..|++.|
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~------~--~~y~mL~~R~l~Gvg~~ 145 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPN------G--VKYLMLVARILTGVGVG 145 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhccc------c--hHHHHHHHHHHcCcCcc
Confidence 455555677888888888888888875 66666777777766654433322211 1 22333444444455544
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH---HHHHHHHHH----------hCcchhHHHHHHHHHHHHHHh
Q psy6142 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVT---KTFNDLTAL----------LGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~---~~~~~~~~~----------~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.....-.|.+.---.+.|.++.+..+.....+..+++ ..+.++.+. .-+..+-|+.++..++.++..
T Consensus 146 n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i 225 (488)
T KOG2325|consen 146 NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVII 225 (488)
T ss_pred cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHH
Confidence 4445556777766677777777765543222222222 222222211 012446778888888887777
Q ss_pred hhhcccC
Q psy6142 444 IIFVPET 450 (483)
Q Consensus 444 ~~~lpet 450 (483)
.+++.|-
T Consensus 226 ~~~f~E~ 232 (488)
T KOG2325|consen 226 LFFFKEV 232 (488)
T ss_pred Hhheeec
Confidence 7777774
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.64 E-value=0.46 Score=48.01 Aligned_cols=88 Identities=13% Similarity=0.069 Sum_probs=47.0
Q ss_pred cHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHH---HHhhhh---hhhH--HHHHHhhH
Q psy6142 81 GVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTC---FIAGTF---LNWY--QLAFFGAC 152 (483)
Q Consensus 81 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~---~~~g~~---~~w~--~~~~~~~~ 152 (483)
.++..++.=++.|++.|........+.+.+ |+++-+...+-+..++.++.+.- ...+.- ..+. ..|..+.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~f-p~~~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~ 183 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGVF-PSTYSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCV 183 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcccC-CHHHHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHH
Confidence 456677888899999999888888888755 45544443333333333332211 111111 1222 23333444
Q ss_pred HHHHHHHHHhcCcCChh
Q psy6142 153 IPVPFLICMFLIPETPR 169 (483)
Q Consensus 153 ~~~~~~~~~~~~pESp~ 169 (483)
+.+.+++....++-+|-
T Consensus 184 v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 184 VQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHhcCHH
Confidence 44555555666665553
No 254
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.026 Score=54.06 Aligned_cols=127 Identities=17% Similarity=0.095 Sum_probs=91.5
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccc
Q psy6142 22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESL-GRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIAS 100 (483)
Q Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~ 100 (483)
-|.+.|+.+.++..+...+.....++....+++|. -||+......+.+.+|-+...+.|....+.- -++.|+|.|+..
T Consensus 236 i~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F 314 (395)
T COG2807 236 IDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAF 314 (395)
T ss_pred HHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHH
Confidence 37788999999999999999999999999999965 4666667777777777777767775543333 499999999999
Q ss_pred cchhhhhcccCCC-Cccchhch-HhHHHHHHHHHHHHHhhhhh----hhHHHHHH
Q psy6142 101 LALPVYLGETVQP-EVRGTLGL-LPTFLGNIGILTCFIAGTFL----NWYQLAFF 149 (483)
Q Consensus 101 ~~~~~~i~E~~p~-~~Rg~~~~-~~~~~~~~g~~~~~~~g~~~----~w~~~~~~ 149 (483)
+.....+..-.++ +.-+...+ .++....++...+.+.|... +|......
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence 9998888655543 33344433 34444555566667777655 46655443
No 255
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.41 E-value=0.99 Score=45.92 Aligned_cols=110 Identities=9% Similarity=-0.007 Sum_probs=77.5
Q ss_pred cchhhHHHHHHHHHHHHH-HhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh--c------------------------
Q psy6142 28 YIQASWIGSLMPLSALFG-GMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA--N------------------------ 80 (483)
Q Consensus 28 ~~~~~~~~s~~~~g~~lG-~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a--~------------------------ 80 (483)
.+...|+-+...+-+.+. .++.+++++|++|++.+-+....+...-++.++. |
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 356777777665666666 8999999999999999998887777666665554 1
Q ss_pred -----cHHHHHHHHHHhhhccccccc-chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHh
Q psy6142 81 -----GVPMILAGRCVAGFCVGIASL-ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIA 137 (483)
Q Consensus 81 -----~~~~l~~~R~l~G~~~g~~~~-~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~ 137 (483)
+.|...+.=...-+-...... ..+.++.|.+..++-.+.-.+.....++|.+.++..
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122333333344443333443 778899999999999998888888888887666544
No 256
>KOG1237|consensus
Probab=96.30 E-value=1.2 Score=46.65 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=82.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHhhHHHHHHHHHHHhhccH--------------------
Q psy6142 24 VKINYIQASWIGSLMPLSALFGGMAGGPLIESL-GRRTTILSTGLPFIVSFLLIALANGV-------------------- 82 (483)
Q Consensus 24 ~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l~~~~~l~~~~~~l~~~a~~~-------------------- 82 (483)
++....+..-..+.+.--..+..+++++++|-| ||-+++.++.+++.+|..+..++...
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 333344444455666667778889999999965 99999999999999986655554221
Q ss_pred -----HHHHHHHHHhhhcccccccchhhhhcccCC---C-Cccc--hhchHhHHHHHHHHHHHHHhh----hhhhhHHHH
Q psy6142 83 -----PMILAGRCVAGFCVGIASLALPVYLGETVQ---P-EVRG--TLGLLPTFLGNIGILTCFIAG----TFLNWYQLA 147 (483)
Q Consensus 83 -----~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p---~-~~Rg--~~~~~~~~~~~~g~~~~~~~g----~~~~w~~~~ 147 (483)
..+..+..+..+|.|+.-++...+=.|-++ + +.+. ..-....+...+|.+++..+- ...+|..-+
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf 227 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGF 227 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeec
Confidence 156777888888999999999999888877 2 2223 233344445555555444332 234565444
Q ss_pred HH
Q psy6142 148 FF 149 (483)
Q Consensus 148 ~~ 149 (483)
-+
T Consensus 228 ~i 229 (571)
T KOG1237|consen 228 GI 229 (571)
T ss_pred cH
Confidence 33
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.04 E-value=0.69 Score=44.69 Aligned_cols=140 Identities=23% Similarity=0.177 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccch
Q psy6142 301 TIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSI 380 (483)
Q Consensus 301 ~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 380 (483)
.........+...+.|.++||+|||+.-+..+++..++++.- .. ...+..++.-++.++.-++-+...
T Consensus 75 f~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-------~~-----~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 75 FVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-------HS-----SNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-------hc-----cccHHHHHHHHHHHHHHHHHHHHH
Confidence 344445667788889999999999997655554444444321 10 111222222222222222211111
Q ss_pred -hhhhhccc----CCccchhhhhHHHHHHHH-HHHHHHHHHHHHHHHHh--CcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142 381 -PWLMMGEI----LPAKIRGSAASLATAFNW-TCTFIVTKTFNDLTALL--GTHGAFWLFGVVCLVGLFFVIIFVPETQG 452 (483)
Q Consensus 381 -~~~~~~Ei----~P~~~R~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~--g~~~~f~i~~~~~~i~~i~~~~~lpet~~ 452 (483)
.| ++.|- +|.+..+...+.+..+++ +..+..........+.. |...+|.....++.++.+++....+|..+
T Consensus 143 EsW-~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 143 ESW-MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHH-HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 12 23343 444433333333332222 22223333333344444 34677877777777776666555677644
Q ss_pred C
Q psy6142 453 K 453 (483)
Q Consensus 453 ~ 453 (483)
.
T Consensus 222 ~ 222 (354)
T PF05631_consen 222 D 222 (354)
T ss_pred C
Confidence 3
No 258
>KOG3810|consensus
Probab=95.99 E-value=0.067 Score=50.92 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=76.7
Q ss_pred hhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHH
Q psy6142 51 PLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIG 130 (483)
Q Consensus 51 ~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g 130 (483)
.+.|-.=.|+++++-.+.......+.-+.++.+.+=+..+.-|...+.+ ...++|+.+..+|+++.+..+..-.+...|
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g 142 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRVTGYCRAAFLVG 142 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHHHHHhHHHHHHH
Confidence 5789888888899999999999999999999999999999999988877 468999999999999999888877777777
Q ss_pred HHHHHHhhhh
Q psy6142 131 ILTCFIAGTF 140 (483)
Q Consensus 131 ~~~~~~~g~~ 140 (483)
-..+...+..
T Consensus 143 ~~~g~vlaQl 152 (433)
T KOG3810|consen 143 KFVGSVLAQL 152 (433)
T ss_pred hHHHhHHHHH
Confidence 7666666654
No 259
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.96 E-value=0.069 Score=52.27 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=87.7
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHhhHHHHHHHHH---HHhhccHHHHHHHHHHhhhcccc
Q psy6142 23 DVKINYIQASWIGSLMPLSALFGGMAGGPLIE-SLGRRTTILSTGLPFIVSFLL---IALANGVPMILAGRCVAGFCVGI 98 (483)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D-~~GRr~~l~~~~~l~~~~~~l---~~~a~~~~~l~~~R~l~G~~~g~ 98 (483)
-++++..|..-+++..-.|..+|-.+.|++.. |.|.|+.-.++++...++-.+ .+...+.+.+..+=++.|++.|.
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 46778888889999999999999999999988 777777777777776665554 44456788999999999999999
Q ss_pred cccchhhhhcccCCCCccchhchHhHHHHHHH
Q psy6142 99 ASLALPVYLGETVQPEVRGTLGLLPTFLGNIG 130 (483)
Q Consensus 99 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g 130 (483)
......+.+.+..++++.|...........++
T Consensus 318 f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 99999999999999998887655555544444
No 260
>KOG3762|consensus
Probab=95.66 E-value=0.024 Score=57.08 Aligned_cols=130 Identities=15% Similarity=0.289 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccc
Q psy6142 300 CTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGS 379 (483)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 379 (483)
.....-.++++.-+.+.++++|+||-+++..+..+...=.+ +.++..+ .|..+-.=++-.+.++.-+..
T Consensus 411 ~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~----~~S~L~n-------~W~vLPieilqgit~aliWaa 479 (618)
T KOG3762|consen 411 VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFL----YYSYLQN-------PWMVLPIEILQGITHALIWAA 479 (618)
T ss_pred hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHH----HHHHhcC-------chheeeHHHHHHHHHHHHHHH
Confidence 34455567888899999999999999988666443332221 1111111 233332223334444444332
Q ss_pred hhhhhhcccCCccchhhhhHHHHHHHH-HHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Q psy6142 380 IPWLMMGEILPAKIRGSAASLATAFNW-TCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 380 ~~~~~~~Ei~P~~~R~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i 441 (483)
...|++...|++.|.++.++...... +|--++....+.+.+..|-+..|+++++.|++.++
T Consensus 480 -~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 480 -IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred -HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 34788899999999999998766532 11122222223345556777788888888776544
No 261
>KOG2563|consensus
Probab=95.61 E-value=0.24 Score=49.07 Aligned_cols=118 Identities=15% Similarity=0.003 Sum_probs=72.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhc
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI 375 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 375 (483)
..-|.+++..++.++.++.+.|+.||+|-|...+.+.....++..+=.+.. .+.....-+-.++.......+.+.
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss-----~p~v~~~f~~~l~~~Gq~iaa~Aq 154 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISS-----LPFVPPLFRRPLTHTGQSIAAAAQ 154 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-----CccccccchhhhhHHhHHHHHHhh
Confidence 456888999999999999999999999999999888877766544321111 111111112122222222222211
Q ss_pred cc-cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Q psy6142 376 GF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFND 418 (483)
Q Consensus 376 g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~ 418 (483)
-+ -.+|.=...--||++.|+++..++.+.+-+|..++..+-+.
T Consensus 155 ~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 155 PFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred hHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccce
Confidence 11 11222233345999999999999988877777777655443
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.38 E-value=0.7 Score=49.22 Aligned_cols=132 Identities=17% Similarity=0.039 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhhh
Q psy6142 306 VVNLLSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPWL 383 (483)
Q Consensus 306 ~~~~~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~ 383 (483)
...-+..++++++.|+ +||++.++.+.++..++..++..... ... ............+..+..|.|.. +....
T Consensus 34 ~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~----~~~-~~~~~~~~~l~gLaLia~G~GgiKp~vsa 108 (654)
T TIGR00926 34 YLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI----PSS-GHPLHDLLDLLGLALIALGTGGIKPCVSA 108 (654)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC----ccc-ccchHHHHHHHHHHHHHhhccccccCchh
Confidence 3344667788899995 89999998887776666654432111 000 00011111223333344454432 22234
Q ss_pred hhcccCCcc---chhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-------CcchhHHHHHHHHHHHHHH
Q psy6142 384 MMGEILPAK---IRGSAASLATAFNWTCTFIVTKTFNDLTALL-------GTHGAFWLFGVVCLVGLFF 442 (483)
Q Consensus 384 ~~~Ei~P~~---~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~f~i~~~~~~i~~i~ 442 (483)
...|.++.+ .|.....+......+|+++.+...+.+.+.. +|+.+|.+.++..++++++
T Consensus 109 f~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 109 FGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 556777654 3556666777777788877777666655332 4666777766666665543
No 263
>KOG1479|consensus
Probab=95.29 E-value=2.9 Score=41.24 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc-chhh
Q psy6142 304 VGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG-SIPW 382 (483)
Q Consensus 304 ~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~ 382 (483)
.++..++|.+.+.+..++= ||.+..... .=+..+.+..++.+.. .+..-...+...... ..++++.|+- ++..
T Consensus 292 fN~~d~vG~~~a~~~~~~~-~r~l~i~v~--lR~lfiPlF~~cn~~~-~~v~~~~~~~~~~l~--~~lglsnGYltsl~m 365 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPD-PRKLTIPVL--LRLLFIPLFLLCNYPP-LPVVFESDGWFIFLM--SLLGLSNGYLTSLIM 365 (406)
T ss_pred hHHHHHhhhhhhhcccCCC-CceehHHHH--HHHHHHHHHHHhccCC-CCceecCchHHHHHH--HHHHhccchHhhhee
Confidence 6778888877777766663 444432221 1111111111111111 111112223333222 3456667764 4566
Q ss_pred hhhcccCCccchhhhhHHHHHHH
Q psy6142 383 LMMGEILPAKIRGSAASLATAFN 405 (483)
Q Consensus 383 ~~~~Ei~P~~~R~~~~s~~~~~~ 405 (483)
.+.++..|++.+..+..+...+-
T Consensus 366 ~~aPk~v~~~e~e~aG~~m~~fl 388 (406)
T KOG1479|consen 366 MYAPKQVKPSEKEAAGNLMVFFL 388 (406)
T ss_pred hhcCCCCChHHHHHHHHHHHHHH
Confidence 78889999999988877766554
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.24 E-value=0.21 Score=50.61 Aligned_cols=144 Identities=15% Similarity=0.211 Sum_probs=81.8
Q ss_pred HHHHHHHHHH--HHHHHHHhhhcc-----cchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHH
Q psy6142 301 TIIVGVVNLL--SVLIATALIDRL-----GRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGF 373 (483)
Q Consensus 301 ~~~~~~~~~~--~~~i~~~lvdr~-----GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 373 (483)
.....+..+| ..++.|.+.|-+ .||+.++++.++...+...++... ... .+.. ....+++...+
T Consensus 28 ~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~~~---~s~~---~~~~~l~la~~ 98 (433)
T PF03092_consen 28 QRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---ASE---SSAA---IAVVLLFLASF 98 (433)
T ss_pred HHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---ccc---chhh---hHHHHHHHHHH
Confidence 4444455554 446889999976 355566666555544333333221 100 1111 11122222333
Q ss_pred hccccc-hhhhhhccc---CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhccc
Q psy6142 374 SIGFGS-IPWLMMGEI---LPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPE 449 (483)
Q Consensus 374 ~~g~~~-~~~~~~~Ei---~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpe 449 (483)
+....- +.=..+.|. -|.+ |+...+.+......|.+++..+.+.+.+..+.+..|.+.++...+..+.++++.+|
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 333222 222233444 4555 88888888888878888888788888888888888888877777766666666677
Q ss_pred CCCCC
Q psy6142 450 TQGKS 454 (483)
Q Consensus 450 t~~~~ 454 (483)
.+.++
T Consensus 178 ~~~~~ 182 (433)
T PF03092_consen 178 RKVRP 182 (433)
T ss_pred ccccc
Confidence 44433
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.98 E-value=0.83 Score=46.04 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=21.9
Q ss_pred hhcccCCCCccchhchHhHHHHHHHHHHHHH
Q psy6142 106 YLGETVQPEVRGTLGLLPTFLGNIGILTCFI 136 (483)
Q Consensus 106 ~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~ 136 (483)
....+..++.++++.+.++.+...|..++..
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~t 172 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFT 172 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHH
Confidence 3445667788999888887777777665543
No 266
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.35 E-value=5.8 Score=40.47 Aligned_cols=110 Identities=16% Similarity=0.129 Sum_probs=64.8
Q ss_pred HHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccc--------------------cchHHHHHHHHH
Q psy6142 310 LSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSE--------------------LGWLPLLSFVVY 369 (483)
Q Consensus 310 ~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 369 (483)
...++-+++++|++|++++-.-...........+..++...+...+.. ..|...+.....
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~ 138 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMA 138 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHH
Confidence 336778999999999998866544444444333333333222111000 012111212111
Q ss_pred HHHHhccccc-hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6142 370 VIGFSIGFGS-IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLT 420 (483)
Q Consensus 370 ~~~~~~g~~~-~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~ 420 (483)
-+ ++.-.-+ +.|.+++|++..+.-.+-.++....+.++..+++.......
T Consensus 139 el-w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 139 EL-WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2222223 67899999999999999999998888888888776655443
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.19 E-value=0.2 Score=49.56 Aligned_cols=111 Identities=17% Similarity=0.093 Sum_probs=84.4
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHH-----HHHHHHhhccHHHHHHHHHHhhhccccccc
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIV-----SFLLIALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~-----~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
..++-.|...+|.+|.+++.=-...+ |+ |+..+.+.+-..- ..-..-+.++.|.+++.-+..|+-.|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 34566788888999988886544433 33 4444444433322 222233458889999999999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL 141 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~ 141 (483)
+....+.|-.|+++|....+..+++-++|++++.+++...
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888877654
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.13 E-value=7.2 Score=39.30 Aligned_cols=105 Identities=20% Similarity=0.147 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccch
Q psy6142 301 TIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSI 380 (483)
Q Consensus 301 ~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 380 (483)
--...+..+.++++..++.+|+|..+.-+.+...-..++......++.... +.+......++..+.+..+|. .++--.
T Consensus 299 R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~-~~~~~s~~~l~~gi~~SR~GL-W~fDL~ 376 (432)
T PF06963_consen 299 RGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGS-PFSSISAYLLLGGIALSRIGL-WSFDLA 376 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCC-CchhhHHHHHHHHHHHHHHHH-HhhhHH
Confidence 344456788999999999999998887777755544444433333322221 100111112222222222221 122223
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHH
Q psy6142 381 PWLMMGEILPAKIRGSAASLATAFNWT 407 (483)
Q Consensus 381 ~~~~~~Ei~P~~~R~~~~s~~~~~~~~ 407 (483)
...+..|..|++.||.-.|.=......
T Consensus 377 ~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 377 VTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred HHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 345788999999999998875554433
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.22 E-value=9.3 Score=37.67 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=67.1
Q ss_pred HHHHHhhHHHHHHHHHHHhh---ccH------HHHHHHHHHhhhcccccccchhhhhcccCCCCccch---hchHhHHHH
Q psy6142 60 TTILSTGLPFIVSFLLIALA---NGV------PMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGT---LGLLPTFLG 127 (483)
Q Consensus 60 ~~l~~~~~l~~~~~~l~~~a---~~~------~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~---~~~~~~~~~ 127 (483)
|++.++.+++.+|.++..++ ++. +.+.++-++.++|.|+.=++...+..|..+++.+.+ .-...-.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67888999999999984443 233 588999999999999999999999999998774333 334455566
Q ss_pred HHHHHHHHHhhhh----hhhHHHHHHhhHHHHHH
Q psy6142 128 NIGILTCFIAGTF----LNWYQLAFFGACIPVPF 157 (483)
Q Consensus 128 ~~g~~~~~~~g~~----~~w~~~~~~~~~~~~~~ 157 (483)
.+|.+++...... .+|...+.+..+..++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence 6676666544333 35666666544444333
No 270
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.44 E-value=4.2 Score=37.72 Aligned_cols=105 Identities=21% Similarity=0.148 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcc-
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG- 376 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g- 376 (483)
.+......+....+.++.+.+.||.|||+.+..+........... .. ... ...+...+.. ...+.+.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~--~~~-----~~~~~~~~~~--~~~g~~~~~ 110 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL--AL--APN-----VGLALLLILR--LLQGLGGGG 110 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH--Hh--Ccc-----chHHHHHHHH--HHHHhhhHH
Confidence 344555566666777999999999999977766654322221111 11 110 0111112112 22333333
Q ss_pred ccchhhhhhcccCCc-cchhhhhHHHHH-HHHHHHHHHH
Q psy6142 377 FGSIPWLMMGEILPA-KIRGSAASLATA-FNWTCTFIVT 413 (483)
Q Consensus 377 ~~~~~~~~~~Ei~P~-~~R~~~~s~~~~-~~~~~~~~~~ 413 (483)
..+....+..|.+|. +.|+...+.... ....+..+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 111 LLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 224455678899988 567777776655 2333333333
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=91.21 E-value=7.9 Score=35.75 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=15.2
Q ss_pred CccchhchHhHHHHHHHHHHH
Q psy6142 114 EVRGTLGLLPTFLGNIGILTC 134 (483)
Q Consensus 114 ~~Rg~~~~~~~~~~~~g~~~~ 134 (483)
|+|+........+..+|.++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~ 22 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIV 22 (267)
T ss_pred CccceeeeeccccchhhHHHH
Confidence 567777777777778876544
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.86 E-value=3.3 Score=42.45 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccc------------cc--------hHHHHHH
Q psy6142 307 VNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSE------------LG--------WLPLLSF 366 (483)
Q Consensus 307 ~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~--------~~~~~~~ 366 (483)
+.++...+-.++.|+++|++++-.............+...+++.+...++. .. |...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 345566678899999999998765444444433334444443322211111 11 1111111
Q ss_pred HHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy6142 367 VVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA 421 (483)
Q Consensus 367 ~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
+..-.--++...-+.|.+.+|+++.+.-.+-.++....+.++.++.+.......+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111122223568899999999999999999888888888777766555444
No 273
>KOG3098|consensus
Probab=90.78 E-value=2.4 Score=42.79 Aligned_cols=92 Identities=22% Similarity=0.232 Sum_probs=68.2
Q ss_pred HHHHHHHHhhhhhhh---hccchhHHHHHhhHHHHHHHHHHHhhc------------------cHHHHHHHHHHhhhccc
Q psy6142 39 PLSALFGGMAGGPLI---ESLGRRTTILSTGLPFIVSFLLIALAN------------------GVPMILAGRCVAGFCVG 97 (483)
Q Consensus 39 ~~g~~lG~~~~G~l~---D~~GRr~~l~~~~~l~~~~~~l~~~a~------------------~~~~l~~~R~l~G~~~g 97 (483)
.+|..+|+...+.++ +++||++.+..+..+..++.++...+. ++....+.=++.|++=+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 345555666666666 578999999999998888888776641 34566888899999999
Q ss_pred ccccchhhhhcccCCCCccchhchHhHHHHHHHH
Q psy6142 98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGI 131 (483)
Q Consensus 98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~ 131 (483)
.......+++.+..| +.|....++......++.
T Consensus 369 ~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 369 CFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Confidence 999999999998884 556666665555555544
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.00 E-value=0.09 Score=50.60 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=2.4
Q ss_pred HHHHHhcccc-chhhhhhcccCCccchhhhhHHHHHHH
Q psy6142 369 YVIGFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFN 405 (483)
Q Consensus 369 ~~~~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~ 405 (483)
+.++++.|+- +....+.++..+++.|..+..++..+-
T Consensus 256 ~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L 293 (309)
T PF01733_consen 256 LLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFL 293 (309)
T ss_dssp -----------HHHH-----------------------
T ss_pred HHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHH
Confidence 4456666763 556677888899888887776655443
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=89.72 E-value=8.8 Score=32.63 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 378 (483)
....+......+++++++.+++++|.|+.+++|.+...+.... .++.+ .+.......+.+++.+.-+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~---~~~~~---------~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS---FFYPN---------SYTLYPASALLGFGAALLWT 108 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH---HHhhh---------HHHHHHHHHHHhhhhHHhhH
Confidence 3345556667788889999999999999998886544432221 12111 23333333333333332221
Q ss_pred chhhhhhcccCCccchhhhhHHHH
Q psy6142 379 SIPWLMMGEILPAKIRGSAASLAT 402 (483)
Q Consensus 379 ~~~~~~~~Ei~P~~~R~~~~s~~~ 402 (483)
..-.+..|...++.|++..++--
T Consensus 109 -aqg~ylt~~s~~~~~~~~~~ifw 131 (156)
T PF05978_consen 109 -AQGTYLTSYSTEETIGRNTGIFW 131 (156)
T ss_pred -hhhHHHHHcCCHHHHhhHHHHHH
Confidence 12245667677777777665533
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.37 E-value=0.71 Score=33.98 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHh
Q psy6142 297 ENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISS 332 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~ 332 (483)
.+....+..+..+++.++.+.++||.||++..+...
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 345566677888999999999999999998776553
No 277
>PRK03612 spermidine synthase; Provisional
Probab=88.67 E-value=5.5 Score=41.32 Aligned_cols=84 Identities=17% Similarity=0.080 Sum_probs=46.8
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhH-H-HHHHHHHH----HhhccH-HHHHHHHHHhhhccccc
Q psy6142 27 NYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGL-P-FIVSFLLI----ALANGV-PMILAGRCVAGFCVGIA 99 (483)
Q Consensus 27 ~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~-l-~~~~~~l~----~~a~~~-~~l~~~R~l~G~~~g~~ 99 (483)
+..+.+.+.++++.|..+|+.+.|++.++.-|+....-..+ + ..++..+. ++...+ ..+...-++.|+-.|+.
T Consensus 48 s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 127 (521)
T PRK03612 48 SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME 127 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566778889999999999999988754444432221111 1 01111111 111111 12344456778888888
Q ss_pred ccchhhhhccc
Q psy6142 100 SLALPVYLGET 110 (483)
Q Consensus 100 ~~~~~~~i~E~ 110 (483)
.|...-+..+.
T Consensus 128 ~Pl~~~~~~~~ 138 (521)
T PRK03612 128 IPLLMRILQRI 138 (521)
T ss_pred HHHHHHHHHhc
Confidence 88776666554
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.08 E-value=3.4 Score=41.57 Aligned_cols=115 Identities=18% Similarity=0.129 Sum_probs=75.1
Q ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH---hhccH-------HHH----HHHHH
Q psy6142 25 KINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA---LANGV-------PMI----LAGRC 90 (483)
Q Consensus 25 ~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~---~a~~~-------~~l----~~~R~ 90 (483)
+.+....+..-+...+....|.+++.++-+|+|-.++=.++......+-.++. +++.. ..+ ...|+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 34444555555566677788999999999999999887777665443333332 33331 122 33442
Q ss_pred HhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhhhh
Q psy6142 91 VAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNW 143 (483)
Q Consensus 91 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~w 143 (483)
|+ .+.+ .+..-++.|..|+++||..++.......+--++....+...+.
T Consensus 369 --GL-W~fD-L~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 369 --GL-WSFD-LAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred --HH-Hhhh-HHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 33 3444 4566788999999999999988887777766666655554443
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.55 E-value=14 Score=37.33 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q psy6142 299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYIS 331 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~ 331 (483)
+..+...+.+++..+....+..|+..|.=+..+
T Consensus 49 ~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~ 81 (437)
T TIGR00939 49 YYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGG 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccchhHHH
Confidence 445555666777777777888887763333334
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.38 E-value=28 Score=34.73 Aligned_cols=98 Identities=16% Similarity=0.058 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc--chhhhhhc
Q psy6142 309 LLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG--SIPWLMMG 386 (483)
Q Consensus 309 ~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--~~~~~~~~ 386 (483)
+..-+....+.|.+|.|+.++.+.+..+....++.. ... . +...+.= +.+|++.+ ...+.|+-
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---~~s-------v-~~mq~~q----~~yg~~~a~evay~sYiy 119 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---GTS-------V-LAMQLMQ----FFYGLATAAEVAYYSYIY 119 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---HCc-------H-HHHHHHH----HHHHHHHHHHHHHHHHhe
Confidence 344455668889999999998887655554443221 110 1 1112112 22333322 22334544
Q ss_pred ccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy6142 387 EILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA 421 (483)
Q Consensus 387 Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
-..|++.=.+.+|.+.+....|.++...+.+.+..
T Consensus 120 s~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 120 SVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred eecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777766655555555555544444
No 281
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=81.75 E-value=9.7 Score=37.54 Aligned_cols=75 Identities=11% Similarity=-0.093 Sum_probs=47.2
Q ss_pred HHHHHHhcccc-chhhhhhcccCCccc---hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHH
Q psy6142 368 VYVIGFSIGFG-SIPWLMMGEILPAKI---RGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFF 442 (483)
Q Consensus 368 l~~~~~~~g~~-~~~~~~~~Ei~P~~~---R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~ 442 (483)
++.++.|.|.. +......+|.++.+. |..+.........+|..+.....+.+.+..||+..|.+.++..+++.+.
T Consensus 40 L~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 40 LALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 33455555554 344456778888764 3344444455556777777666666777788888888887777776553
No 282
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=77.19 E-value=0.78 Score=47.75 Aligned_cols=117 Identities=12% Similarity=0.009 Sum_probs=1.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCC----CC-----------------
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTG----SD----------------- 354 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~----~~----------------- 354 (483)
+..+......++.++..++..|+.+|-.|-+.+-.|.+++.++.++...-.+..... .+
T Consensus 39 ~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~ 118 (539)
T PF03137_consen 39 QSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSS 118 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccc
Confidence 345556666777888888888888886555555566666666554433222111000 00
Q ss_pred --------------ccccchHHHHHHHHHHHHHhccccc---hhhhhhcccCCccchhhhhHHHHHHHHHHHHHH
Q psy6142 355 --------------VSELGWLPLLSFVVYVIGFSIGFGS---IPWLMMGEILPAKIRGSAASLATAFNWTCTFIV 412 (483)
Q Consensus 355 --------------~~~~~~~~~~~~~l~~~~~~~g~~~---~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~ 412 (483)
.....+.....+++..+..|+|..+ +-..|+-|-.+++.-+...|+..+...+|..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 119 SSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp ---------------------------------SSS---------------------------------------
T ss_pred cccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 0000111122222223334444332 335688898999888888887766655444433
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=73.02 E-value=15 Score=27.60 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=36.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHH
Q psy6142 296 NENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLG 343 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~ 343 (483)
+..+......++.++|.+...++.++.++++.+..+.+...+....++
T Consensus 28 ~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 28 QAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 456788888899999999999999987777777777665555554443
No 284
>KOG3880|consensus
Probab=70.16 E-value=11 Score=35.85 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhhh
Q psy6142 67 LPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL 141 (483)
Q Consensus 67 ~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~ 141 (483)
+++.+.....-+.|+++..++.-+..|+-.|..+++..-=+.+-.+++.|....+..+..-++|+.++..++..+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344455555667889999999999999999999999988899888999999999999999999988877766543
No 285
>KOG0637|consensus
Probab=69.78 E-value=4.2 Score=40.69 Aligned_cols=77 Identities=16% Similarity=-0.007 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhc
Q psy6142 32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLG 108 (483)
Q Consensus 32 ~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~ 108 (483)
.|-..++.+-..+-++..-++.||+|-|+.+..+...+.++..+.+..++......-|-..|+-.+....+-+..++
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~ 411 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALA 411 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHH
Confidence 34444566666678889999999999777777777779999999999999999999998888654444443333333
No 286
>KOG3574|consensus
Probab=69.64 E-value=1.2e+02 Score=30.07 Aligned_cols=89 Identities=12% Similarity=0.192 Sum_probs=50.0
Q ss_pred Hhhhhhhhh-----ccchhHHHHHhhHHHHHHHHHHHhh-------------ccHHHHHHHHHHhhhcccccccchhhhh
Q psy6142 46 GMAGGPLIE-----SLGRRTTILSTGLPFIVSFLLIALA-------------NGVPMILAGRCVAGFCVGIASLALPVYL 107 (483)
Q Consensus 46 ~~~~G~l~D-----~~GRr~~l~~~~~l~~~~~~l~~~a-------------~~~~~l~~~R~l~G~~~g~~~~~~~~~i 107 (483)
=++|.++.| |+||||..+.=+ -+.+|.++..++ |+...+...-++.-+.++..=...-...
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~-q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwA 158 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPC-QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWA 158 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeeh-HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 356788888 999999866433 223444444443 2222222222333333333333333444
Q ss_pred cccCCCCccchhchHhHHHHHHHHHHHH
Q psy6142 108 GETVQPEVRGTLGLLPTFLGNIGILTCF 135 (483)
Q Consensus 108 ~E~~p~~~Rg~~~~~~~~~~~~g~~~~~ 135 (483)
..+..+++-|++.+.+.++...|...+.
T Consensus 159 LtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 159 LTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 4566778888888888777777765554
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.50 E-value=22 Score=27.65 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhcc-chhHHH
Q psy6142 30 QASWIGSLMPLSALFGGMAGGPLIESL-GRRTTI 62 (483)
Q Consensus 30 ~~~~~~s~~~~g~~lG~~~~G~l~D~~-GRr~~l 62 (483)
+...-.+.=+++..+-....||+.|+| |-++-.
T Consensus 43 ~~a~klssefIsGilVGa~iG~llD~~agTsPwg 76 (116)
T COG5336 43 AQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWG 76 (116)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 344444444555555556678999988 444433
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=58.27 E-value=2.3e+02 Score=29.25 Aligned_cols=95 Identities=18% Similarity=0.102 Sum_probs=59.6
Q ss_pred HHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh--ccHH-----------------------------HHHHHH
Q psy6142 41 SALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA--NGVP-----------------------------MILAGR 89 (483)
Q Consensus 41 g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a--~~~~-----------------------------~l~~~R 89 (483)
+.++-..+..+++++++|.+++-.....+...-.+.++. |+-. .+.+.-
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 455667778999999999999998887776666555553 1111 111111
Q ss_pred HHhhhcccccc-cchhhhhcccCCCCccchhchHhHHHHHHHHHHHH
Q psy6142 90 CVAGFCVGIAS-LALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCF 135 (483)
Q Consensus 90 ~l~G~~~g~~~-~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~ 135 (483)
.+.-+-..... ..-+.+..|.++.++..+.-.+......+|.+++.
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG 197 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSG 197 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112111222 24578888999999888877777777777755443
No 289
>KOG1479|consensus
Probab=58.18 E-value=39 Score=33.57 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=75.5
Q ss_pred hhHHHHH-HHHHHHHHHhhhhhhhhccchhHHHHHhhHHHH-HHHH-HH------HhhccHHHHHHHHHHhhhccccccc
Q psy6142 31 ASWIGSL-MPLSALFGGMAGGPLIESLGRRTTILSTGLPFI-VSFL-LI------ALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 31 ~~~~~s~-~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~-~~~~-l~------~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
...+..+ |++.-.+|.+...++-++= ||+..+.+++=+. +-.+ +| .+-.+-+.+++.-.+.|+..|=...
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3345556 8999999988888877765 4444333332111 1111 11 1224455778889999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAG 138 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g 138 (483)
....|.-+..|++++..++.+..++...|+..+.+.+
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999988888887666544
No 290
>KOG1237|consensus
Probab=53.80 E-value=1.6e+02 Score=31.08 Aligned_cols=137 Identities=18% Similarity=0.143 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhhhc-ccchHHHHHHhHHHHHHHHHHHHHHhhccCCC--------C-c-cccch--HHHHHHHHHHH
Q psy6142 305 GVVNLLSVLIATALIDR-LGRKILLYISSTAMILTLATLGTFFYFKSTGS--------D-V-SELGW--LPLLSFVVYVI 371 (483)
Q Consensus 305 ~~~~~~~~~i~~~lvdr-~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~--------~-~-~~~~~--~~~~~~~l~~~ 371 (483)
+.......+.++++.|- .||-+.+.++.++..++++.+..........+ . . ...+. ..++...+..+
T Consensus 83 ~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~li 162 (571)
T KOG1237|consen 83 GGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLI 162 (571)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHh
Confidence 33455677889999995 68988888887776666544433222111100 0 0 01111 11222223333
Q ss_pred HHhcccc-chhhhhhcccCCccchhhhhHHHHHHH------HHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Q psy6142 372 GFSIGFG-SIPWLMMGEILPAKIRGSAASLATAFN------WTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLF 441 (483)
Q Consensus 372 ~~~~g~~-~~~~~~~~Ei~P~~~R~~~~s~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i 441 (483)
..|.|.- +.....-+|.++...+-........++ ..+.++......+..+..+|..-|-+..+..+++.+
T Consensus 163 a~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 163 ALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred eeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH
Confidence 3333321 223345678888444433333333333 244444444444455556777767666666655543
No 291
>KOG3880|consensus
Probab=50.23 E-value=1.2e+02 Score=29.22 Aligned_cols=124 Identities=22% Similarity=0.250 Sum_probs=66.4
Q ss_pred HHHHHhhhhhhhhcc--chhHHHHHhhHHHHHHHHHHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchh
Q psy6142 42 ALFGGMAGGPLIESL--GRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTL 119 (483)
Q Consensus 42 ~~lG~~~~G~l~D~~--GRr~~l~~~~~l~~~~~~l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~ 119 (483)
..+--+....+.||+ |.| ..+..++...+-++.+++.+.++=+.|-.+.-++.|.--.+.-.+-+.+.+....++
T Consensus 75 sL~iKl~~Pff~~rfpf~~R--i~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i~~W- 151 (409)
T KOG3880|consen 75 SLAIKLTAPFFIHRFPFGFR--IALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSIVIAGW- 151 (409)
T ss_pred HHHHHHhchhhhhhcccchH--HHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCceeccc-
Confidence 444555666777765 555 344556666777788999999999999988888877765544444433332222222
Q ss_pred chHhHHHHHHHHHHHHHhhh--hhhhHHHHHHhhHHHHHHHHHHhcCcCCh
Q psy6142 120 GLLPTFLGNIGILTCFIAGT--FLNWYQLAFFGACIPVPFLICMFLIPETP 168 (483)
Q Consensus 120 ~~~~~~~~~~g~~~~~~~g~--~~~w~~~~~~~~~~~~~~~~~~~~~pESp 168 (483)
.+-.+.+..+|...-..+-. .++-+....+...+++++...++++-++|
T Consensus 152 SSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 152 SSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred cCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 11112222233221111111 12235555555556666666665543333
No 292
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=47.47 E-value=20 Score=27.00 Aligned_cols=43 Identities=14% Similarity=0.021 Sum_probs=31.8
Q ss_pred HHHHHHHhhhhhhhhccch-------hHHHHHhhHHHHHHHHHHHhhccH
Q psy6142 40 LSALFGGMAGGPLIESLGR-------RTTILSTGLPFIVSFLLIALANGV 82 (483)
Q Consensus 40 ~g~~lG~~~~G~l~D~~GR-------r~~l~~~~~l~~~~~~l~~~a~~~ 82 (483)
.+...+++.++++.+|.-+ ++.+..+.++-..+++++++..+.
T Consensus 29 a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 29 AGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556666677766644 788999999999999999887654
No 293
>COG3462 Predicted membrane protein [Function unknown]
Probab=45.53 E-value=57 Score=25.41 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhCCCcchhHHHHHHH
Q psy6142 178 KQARKALQWLRGKDADISREFAEIE 202 (483)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~ 202 (483)
++|.++++....+.+-.++|+.++.
T Consensus 88 sRA~eIlkER~AkGEItEEEY~r~~ 112 (117)
T COG3462 88 SRAEEILKERYAKGEITEEEYRRII 112 (117)
T ss_pred cHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 5677777655444333344444443
No 294
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=43.60 E-value=62 Score=26.82 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=15.6
Q ss_pred ccCCccchhhhhHHHHHHH
Q psy6142 387 EILPAKIRGSAASLATAFN 405 (483)
Q Consensus 387 Ei~P~~~R~~~~s~~~~~~ 405 (483)
|++|+..|....+..+...
T Consensus 60 Dm~Pp~~R~~i~~~~s~t~ 78 (145)
T TIGR00986 60 DIVPPTTRGWIYHKYSTTT 78 (145)
T ss_pred hhCCHHHHHHHHHHHHHHH
Confidence 9999999998887766544
No 295
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=41.62 E-value=8.2 Score=37.04 Aligned_cols=103 Identities=22% Similarity=0.222 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHhhhhhhhhcc--chhHHHHHhh--HHHHHHHHHH----------HhhccHHHHHHHHHHhhhccccccc
Q psy6142 36 SLMPLSALFGGMAGGPLIESL--GRRTTILSTG--LPFIVSFLLI----------ALANGVPMILAGRCVAGFCVGIASL 101 (483)
Q Consensus 36 s~~~~g~~lG~~~~G~l~D~~--GRr~~l~~~~--~l~~~~~~l~----------~~a~~~~~l~~~R~l~G~~~g~~~~ 101 (483)
.+|++|=++|..+.++.- +- .+|+....+. +++.-.-++| .+-+|-+.+++.-++-|+..|-...
T Consensus 189 l~Fn~gD~iGR~l~~~~~-~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~t 267 (309)
T PF01733_consen 189 LLFNLGDFIGRFLASWPR-WPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLST 267 (309)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred HHHHHHHHhcchhcceeE-ecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhhh
Confidence 357777788887776642 11 2444443322 2222222222 1223445667788999999999999
Q ss_pred chhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh
Q psy6142 102 ALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT 139 (483)
Q Consensus 102 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~ 139 (483)
....+..+..++++|..++.+..++...|...+..++.
T Consensus 268 l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 268 LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHH-----------------------------------
T ss_pred ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888877766544
No 296
>KOG3626|consensus
Probab=41.11 E-value=3e+02 Score=29.92 Aligned_cols=148 Identities=18% Similarity=0.129 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhcc-------------CCC-------------------
Q psy6142 306 VVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKS-------------TGS------------------- 353 (483)
Q Consensus 306 ~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~-------------~~~------------------- 353 (483)
+++.+......|...|.-|-+.+-.|.+++.+..++.....+... ...
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 455566666777777777767777777777666554443311110 000
Q ss_pred -Ccc----ccchHHHHHHHHHHHHHhccccc---hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH----
Q psy6142 354 -DVS----ELGWLPLLSFVVYVIGFSIGFGS---IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA---- 421 (483)
Q Consensus 354 -~~~----~~~~~~~~~~~l~~~~~~~g~~~---~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~---- 421 (483)
++. +......+.+++..+..|+|-.+ +-..|+-|-.-++.-+...|+...+..+|.+++-.+......
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 000 11122333444444445555433 223467676666666666777776666665555433322221
Q ss_pred --------------HhC-cchhHHHHHHHHHHHHHHhhhhcccCCCCC
Q psy6142 422 --------------LLG-THGAFWLFGVVCLVGLFFVIIFVPETQGKS 454 (483)
Q Consensus 422 --------------~~g-~~~~f~i~~~~~~i~~i~~~~~lpet~~~~ 454 (483)
+.| |+.-|++.+.+.++..+ .++++|.+..++
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~-p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV-PLFFFPKELPKS 349 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH-HHHhCcccCccc
Confidence 112 22234456666666544 345667765544
No 297
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.86 E-value=72 Score=24.96 Aligned_cols=53 Identities=17% Similarity=0.184 Sum_probs=32.3
Q ss_pred CccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHh
Q psy6142 390 PAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFV 443 (483)
Q Consensus 390 P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~ 443 (483)
.++.++.+.++....-.+.++++...++.+++..-.. .-|...+..++++...
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT-sPwglIv~lllGf~AG 88 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT-SPWGLIVFLLLGFGAG 88 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHH
Confidence 3567777777777777788888888888777764322 2233334444444433
No 298
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=40.58 E-value=3.4e+02 Score=26.35 Aligned_cols=24 Identities=13% Similarity=0.300 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccch
Q psy6142 302 IIVGVVNLLSVLIATALIDRLGRK 325 (483)
Q Consensus 302 ~~~~~~~~~~~~i~~~lvdr~GRr 325 (483)
+...+...+....-=+++++..|.
T Consensus 174 l~~a~lya~~nV~~E~~v~~~~~~ 197 (334)
T PF06027_consen 174 LLGAILYAVSNVLEEKLVKKAPRV 197 (334)
T ss_pred HHHHHHHHHHHHHHHHhcccCCHH
Confidence 333444445555555666665543
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=39.64 E-value=2.2e+02 Score=26.53 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhh-----HHHHHHHHHH-Hhhc----cHHHHHHHHHHhhhcccccccc
Q psy6142 33 WIGSLMPLSALFGGMAGGPLIESLGRRTTILSTG-----LPFIVSFLLI-ALAN----GVPMILAGRCVAGFCVGIASLA 102 (483)
Q Consensus 33 ~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~-----~l~~~~~~l~-~~a~----~~~~l~~~R~l~G~~~g~~~~~ 102 (483)
...-++..|.++|.++.|.....-=|||-++.++ +++++..++. .+.+ ++..+.+.-|+.|+..=+..++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3455688889999999999998666666665443 3333433332 1121 3556778888888754333333
Q ss_pred hhhhhcccCCCCccchhchHhHHHHHHHHHH
Q psy6142 103 LPVYLGETVQPEVRGTLGLLPTFLGNIGILT 133 (483)
Q Consensus 103 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~ 133 (483)
.-..--|. +...+.+.+...++.|.+|.+.
T Consensus 225 iL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 225 ILNLPHEY-KGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HhcChhhh-cCCCcceehhHHHHHHHHHHHH
Confidence 32222333 3334455778888888887543
No 300
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=38.75 E-value=49 Score=27.30 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=15.5
Q ss_pred ccCCccchhhhhHHHHHHH
Q psy6142 387 EILPAKIRGSAASLATAFN 405 (483)
Q Consensus 387 Ei~P~~~R~~~~s~~~~~~ 405 (483)
|++|+..|....+..+...
T Consensus 62 di~P~~~R~~i~~~~~~~~ 80 (137)
T PF04281_consen 62 DIFPPSVRNWISSTVSTTS 80 (137)
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 9999999998887766543
No 301
>KOG4332|consensus
Probab=34.78 E-value=1.8e+02 Score=27.37 Aligned_cols=21 Identities=33% Similarity=0.363 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhhhcccchHHH
Q psy6142 308 NLLSVLIATALIDRLGRKILL 328 (483)
Q Consensus 308 ~~~~~~i~~~lvdr~GRr~~l 328 (483)
..+.+.+.+-++||-|||+.-
T Consensus 85 smLFGtivgSLaDkqGRKrac 105 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRAC 105 (454)
T ss_pred HHHHHHHHHHHHhhhccccce
Confidence 345556778899999999854
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=33.23 E-value=5.6e+02 Score=26.41 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCC-------------cccc--------chHHHHH
Q psy6142 307 VNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSD-------------VSEL--------GWLPLLS 365 (483)
Q Consensus 307 ~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~--------~~~~~~~ 365 (483)
+.++.+++-.++.++..|++++-.-......+.+..+...++..+-.. +... .|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 456677788899999999887754433333333333333332211111 1111 1322222
Q ss_pred HHHHHHHHhccccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy6142 366 FVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF 416 (483)
Q Consensus 366 ~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~ 416 (483)
..+.-+--++-..-+.|..+.|++..+.-.+-.++-+..+.++..+.+...
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 222222112222335678889999988888888887777766666655443
No 303
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=32.73 E-value=68 Score=25.75 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=15.2
Q ss_pred HHhcCcCChhhhhhcCCHHHHHHHHHHHh
Q psy6142 160 CMFLIPETPRWYIGRNKQKQARKALQWLR 188 (483)
Q Consensus 160 ~~~~~pESp~~l~~~~~~~~a~~~l~~~~ 188 (483)
+++++|+-|.....+++.+.+++.++.++
T Consensus 59 l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 59 LSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHhccCCcccccccccCCCHHHHHHHHH
Confidence 34667877755333333344555555443
No 304
>KOG3574|consensus
Probab=32.35 E-value=2.2e+02 Score=28.42 Aligned_cols=19 Identities=26% Similarity=0.578 Sum_probs=13.8
Q ss_pred HHHHHhhh-----cccchHHHHHH
Q psy6142 313 LIATALID-----RLGRKILLYIS 331 (483)
Q Consensus 313 ~i~~~lvd-----r~GRr~~l~~~ 331 (483)
++...++| |+|||+..++-
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeee
Confidence 35556677 99999987654
No 305
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=30.30 E-value=5.2e+02 Score=26.82 Aligned_cols=20 Identities=20% Similarity=0.408 Sum_probs=13.5
Q ss_pred HHHHHhhhcccchHHHHHHh
Q psy6142 313 LIATALIDRLGRKILLYISS 332 (483)
Q Consensus 313 ~i~~~lvdr~GRr~~l~~~~ 332 (483)
++=.....|+|||+..++-.
T Consensus 58 iVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 58 IVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred hhhhhcccccCCcchhhhHH
Confidence 33445556899999876653
No 306
>PRK03612 spermidine synthase; Provisional
Probab=29.52 E-value=6.6e+02 Score=26.12 Aligned_cols=22 Identities=9% Similarity=0.111 Sum_probs=10.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q psy6142 396 SAASLATAFNWTCTFIVTKTFN 417 (483)
Q Consensus 396 ~~~s~~~~~~~~~~~~~~~~~~ 417 (483)
...|-....+.+|+++++.+.+
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~ 166 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFP 166 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHH
Confidence 3344445555555555554443
No 307
>TIGR00930 2a30 K-Cl cotransporter.
Probab=29.26 E-value=3.4e+02 Score=30.76 Aligned_cols=36 Identities=17% Similarity=0.359 Sum_probs=19.0
Q ss_pred CCCccchhchHhHHHHHHHHHHHHHhhhhhhhHHHH
Q psy6142 112 QPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLA 147 (483)
Q Consensus 112 p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~~~w~~~~ 147 (483)
++++|...-........+|.+.+..+....+|....
T Consensus 488 ~p~~RP~fk~~~~~~sllG~l~c~~lmf~i~w~~al 523 (953)
T TIGR00930 488 SPGWRPRFKYYHWWLSLLGASLCCAIMFLISWWAAL 523 (953)
T ss_pred CCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345554433233344555666666666666775543
No 308
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.90 E-value=1.9e+02 Score=22.41 Aligned_cols=38 Identities=21% Similarity=0.058 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHH
Q psy6142 31 ASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLP 68 (483)
Q Consensus 31 ~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l 68 (483)
.+.++....+..++|.+++-||-.+||-++.+.+..++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 33344445566667777777777788877655554433
No 309
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=26.81 E-value=1.6e+02 Score=25.78 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhhhhhhhccchhHH
Q psy6142 38 MPLSALFGGMAGGPLIESLGRRTT 61 (483)
Q Consensus 38 ~~~g~~lG~~~~G~l~D~~GRr~~ 61 (483)
|.+|-.+++.+.|++.||.-+|+.
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~~~~ 114 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRKRNG 114 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccc
Confidence 778888999999999999976333
No 310
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=25.07 E-value=1.5e+02 Score=24.03 Aligned_cols=11 Identities=18% Similarity=0.259 Sum_probs=7.2
Q ss_pred HHhcCcCChhh
Q psy6142 160 CMFLIPETPRW 170 (483)
Q Consensus 160 ~~~~~pESp~~ 170 (483)
+++++|+-|.-
T Consensus 54 ~w~~lp~~p~~ 64 (121)
T TIGR02978 54 LWLLLDKKPIN 64 (121)
T ss_pred HHHHHhcCccc
Confidence 45667887754
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=24.14 E-value=2e+02 Score=24.28 Aligned_cols=82 Identities=20% Similarity=0.294 Sum_probs=38.3
Q ss_pred HhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccchhh
Q psy6142 317 ALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGS 396 (483)
Q Consensus 317 ~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R~~ 396 (483)
.+.||.-||..+..|.- +.+++.....+++....+..........++.+.+ |+.|.-.+.|-+.+-.-.++.-|+
T Consensus 56 ~Vs~RM~rRm~~~~GiP-~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~----Fg~gllGisYGilSaSWD~~r~GS 130 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIP-TALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVF----FGLGLLGISYGILSASWDPEREGS 130 (153)
T ss_pred HHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHhccccccCchHHHHHHHHH----HHHHHHhhhhhhcccccCCCCCCC
Confidence 55688877776655543 3444433333333332221111111122222322 333333444544445566677777
Q ss_pred hhHHHHH
Q psy6142 397 AASLATA 403 (483)
Q Consensus 397 ~~s~~~~ 403 (483)
..|+-..
T Consensus 131 llG~~e~ 137 (153)
T PF11947_consen 131 LLGWEEF 137 (153)
T ss_pred cccHHHH
Confidence 7776543
No 312
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=23.84 E-value=3.7e+02 Score=21.33 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhH
Q psy6142 298 NYCTIIVGVVNLLSVLIATALIDRLGRKILLYISST 333 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~ 333 (483)
........+...++.++++..+-|.-+++-++.|..
T Consensus 37 ~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~ 72 (116)
T PF12670_consen 37 SILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLL 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 344455556667777777777666444444444433
No 313
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=22.44 E-value=59 Score=22.70 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=28.2
Q ss_pred HHHhhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccc
Q psy6142 75 LIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRG 117 (483)
Q Consensus 75 l~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg 117 (483)
+....-++..+...-...+++.|... ....+++|..+++++|
T Consensus 21 la~i~i~it~F~~n~~~g~i~i~I~l-~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 21 LAMIFINITAFLINQIAGLISIGITL-FLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccCC
Confidence 33344566677777777777777665 4557888999886655
No 314
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=21.38 E-value=2.7e+02 Score=21.91 Aligned_cols=26 Identities=4% Similarity=-0.197 Sum_probs=17.8
Q ss_pred HHHHhhhcccccccchhhhhcccCCC
Q psy6142 88 GRCVAGFCVGIASLALPVYLGETVQP 113 (483)
Q Consensus 88 ~R~l~G~~~g~~~~~~~~~i~E~~p~ 113 (483)
.|.+.+.|.-+...+..++..|...-
T Consensus 55 ~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 55 VYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHhhHccccccHHHHHHHHHHH
Confidence 44555666667777888888887743
No 315
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.33 E-value=1.3e+02 Score=23.47 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=21.2
Q ss_pred HHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCC
Q psy6142 421 ALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKS 454 (483)
Q Consensus 421 ~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~ 454 (483)
+.-+|+.++++...++++.+.+.+.+.|||.-++
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~ 88 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQT 88 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 3445666666544444444455667889998876
No 316
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=20.85 E-value=1.5e+02 Score=24.56 Aligned_cols=53 Identities=13% Similarity=-0.018 Sum_probs=30.3
Q ss_pred cchhhHHHHHHHHHHHHHHhhhhh-hhhccchhHHHHHhhHHHHHHHHHHHhhc
Q psy6142 28 YIQASWIGSLMPLSALFGGMAGGP-LIESLGRRTTILSTGLPFIVSFLLIALAN 80 (483)
Q Consensus 28 ~~~~~~~~s~~~~g~~lG~~~~G~-l~D~~GRr~~l~~~~~l~~~~~~l~~~a~ 80 (483)
..+.+....+..+-.++++.++|| .++...-..-.-.-+++..+++++.+++.
T Consensus 74 ~~~~qls~v~Nilvsv~~~~~~~~~~~~~~~~~~~~~~Rvllgl~~al~vlvAE 127 (142)
T PF11712_consen 74 SVKRQLSTVFNILVSVFAVFFAGWYWAGYSFGGWSFPYRVLLGLFGALLVLVAE 127 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 334556666677778888888888 44422212223334445555566665554
No 317
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=20.85 E-value=4.9e+02 Score=21.54 Aligned_cols=19 Identities=11% Similarity=-0.019 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhhccHHHH
Q psy6142 67 LPFIVSFLLIALANGVPMI 85 (483)
Q Consensus 67 ~l~~~~~~l~~~a~~~~~l 85 (483)
.+....+++..++.|+..+
T Consensus 41 all~~~gii~fvA~nW~~i 59 (145)
T PF09925_consen 41 ALLLGLGIILFVAANWDDI 59 (145)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 3344455555566666544
Done!