BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6156
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1A5K2|CLA1B_XENLA CLIP-associating protein 1-B OS=Xenopus laevis GN=clasp1b PE=1 SV=1
Length = 1456
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKVIE+ K + LP+I+P LLQ Y+N +S VRK S
Sbjct: 1343 KVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKAS 1402
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQ 150
VFC+VA+Y GE L PY+ +L+G+K+KLL LYIKR+Q
Sbjct: 1403 VFCLVAVYSVIGEE-LKPYLAQLTGSKMKLLNLYIKRAQ 1440
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKVIE+ K + LP+I+P LLQ Y+N +S VRK SVFC+VA+Y V
Sbjct: 1363 MQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAVYSV 1412
>sp|A1A5G0|CLAP1_XENTR CLIP-associating protein 1 OS=Xenopus tropicalis GN=clasp1 PE=1 SV=1
Length = 1452
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKVIE+ K + LP+I+P LLQ Y+N +S VRK S
Sbjct: 1339 KVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKAS 1398
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQ 150
VFC+VA+Y GE L PY+ +L+G K+KLL LYIKR+Q
Sbjct: 1399 VFCLVAIYSVIGEE-LKPYLAQLTGGKMKLLNLYIKRAQ 1436
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKVIE+ K + LP+I+P LLQ Y+N +S VRK SVFC+VA+Y V
Sbjct: 1359 MQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAIYSV 1408
>sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2
Length = 1294
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/109 (50%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKVIE+ K + L LP IMP L+Q Y+N +S VRK
Sbjct: 1181 KVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKAC 1240
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQTHSSSV-PTS 159
VFC+VA++ G+ L P++++L+G+K+KLL LYIKR+QT S PT+
Sbjct: 1241 VFCLVAVHAVIGDE-LKPHLSQLTGSKMKLLNLYIKRAQTGSGGADPTT 1288
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKVIE+ K + L LP IMP L+Q Y+N +S VRK VFC+VA++ V
Sbjct: 1201 MQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAV 1250
>sp|Q99JD4|CLAP2_RAT CLIP-associating protein 2 OS=Rattus norvegicus GN=Clasp2 PE=2 SV=1
Length = 1286
Score = 111 bits (278), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/109 (50%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKVIE+ K + L LP IMP L+Q Y+N +S VRK
Sbjct: 1173 KVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKAC 1232
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQTHSSSV-PTS 159
VFC+VA++ G+ L P++++L+G+K+KLL LYIKR+QT S+ PT+
Sbjct: 1233 VFCLVAVHAVIGDE-LKPHLSQLTGSKMKLLNLYIKRAQTGSAGADPTT 1280
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKVIE+ K + L LP IMP L+Q Y+N +S VRK VFC+VA++ V
Sbjct: 1193 MQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAV 1242
>sp|Q8BRT1|CLAP2_MOUSE CLIP-associating protein 2 OS=Mus musculus GN=Clasp2 PE=1 SV=1
Length = 1286
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKVIE+ K + + LP IMP L+Q Y+N +S VRK
Sbjct: 1173 KVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNMLLPEIMPGLIQGYDNSESSVRKAC 1232
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQTHSSSV-PTS 159
VFC+VA++ G+ L P++++L+G+K+KLL LYIKR+QT S+ PT+
Sbjct: 1233 VFCLVAVHAVIGDE-LKPHLSQLTGSKMKLLNLYIKRAQTGSAGADPTA 1280
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKVIE+ K + + LP IMP L+Q Y+N +S VRK VFC+VA++ V
Sbjct: 1193 MQTKVIERVSKETLNMLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAV 1242
>sp|Q4U0G1|CLA1A_XENLA CLIP-associating protein 1-A OS=Xenopus laevis GN=clasp1-a PE=2 SV=2
Length = 1460
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM KVIE+ K + LP+I+P LLQ Y+N +S VRK S
Sbjct: 1347 KVLCPIIQTADYPINLAAIKMQAKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKAS 1406
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQ 150
VFC+VA+Y GE L PY+ +L+G+K+KLL LYIKR+Q
Sbjct: 1407 VFCLVAIYSVIGEE-LKPYLAQLTGSKMKLLNLYIKRAQ 1444
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M KVIE+ K + LP+I+P LLQ Y+N +S VRK SVFC+VA+Y V
Sbjct: 1367 MQAKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAIYSV 1416
>sp|Q6NYW6|CLAP2_DANRE CLIP-associating protein 2 OS=Danio rerio GN=clasp2 PE=2 SV=1
Length = 1288
Score = 106 bits (265), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I + ++PINL AIKMLTKVI++ K + LP I+P L+Q Y+N +S VRK
Sbjct: 1174 KVLCPIIQSADYPINLAAIKMLTKVIDRLPKEGLIQMLPEIVPGLIQGYDNSESSVRKAC 1233
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRS 149
VFC+VA+Y GE L P++++LSG+KLKLL LYIKR+
Sbjct: 1234 VFCLVAIYAVIGED-LKPHLSQLSGSKLKLLNLYIKRA 1270
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
MLTKVI++ K + LP I+P L+Q Y+N +S VRK VFC+VA+Y V
Sbjct: 1194 MLTKVIDRLPKEGLIQMLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAV 1243
>sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1
Length = 1538
Score = 105 bits (262), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKV+E+ K + L +I+P LLQ Y+N +S VRK S
Sbjct: 1425 KVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKAS 1484
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQ 150
VFC+VA+Y GE L P++ +L+G+K+KLL LYIKR+Q
Sbjct: 1485 VFCLVAIYSVIGED-LKPHLAQLTGSKMKLLNLYIKRAQ 1522
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKV+E+ K + L +I+P LLQ Y+N +S VRK SVFC+VA+Y V
Sbjct: 1445 MQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSV 1494
>sp|Q80TV8|CLAP1_MOUSE CLIP-associating protein 1 OS=Mus musculus GN=Clasp1 PE=1 SV=2
Length = 1535
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 52 RILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCS 111
++L P+I ++PINL AIKM TKV+E+ K + L +I+P LLQ Y+N +S VRK S
Sbjct: 1422 KVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKAS 1481
Query: 112 VFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQ 150
VFC+VA+Y GE L P++ +L+G+K+KLL LYIKR+Q
Sbjct: 1482 VFCLVAIYSVIGED-LKPHLAQLTGSKMKLLNLYIKRAQ 1519
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
M TKV+E+ K + L +I+P LLQ Y+N +S VRK SVFC+VA+Y V
Sbjct: 1442 MQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSV 1491
>sp|Q9NBD7|CLASP_DROME CLIP-associating protein OS=Drosophila melanogaster GN=chb PE=1 SV=1
Length = 1491
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 17 FLPNIMPALLQAYENQDSCVRKC-SVFCMVA----LYKVTRILFPLIIAEEHPINLVAIK 71
FL I+ ++Q Y++ +R S+ +A L I+ P+I E P NL AIK
Sbjct: 1334 FLELILLKIIQCYQHSKEALRDIDSMIPRIAPSLPLDLSINIVNPVIATGEFPTNLCAIK 1393
Query: 72 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSPYI 131
+L +V E +G + L + P L ++ ++ S VRK +VFC+V LY GE + P +
Sbjct: 1394 ILLEVTEHHGSEITDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKL 1453
Query: 132 NKLSGAKLKLLQLYIKR---------SQTHSSSVPTS 159
+ L+ +K++LL +YI++ S T +SS +S
Sbjct: 1454 SVLNPSKVRLLNVYIEKQRNCISGGGSSTKNSSAASS 1490
Score = 35.8 bits (81), Expect = 0.16, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKV 50
+L +V E +G + L + P L ++ ++ S VRK +VFC+V LY V
Sbjct: 1394 ILLEVTEHHGSEITDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFV 1443
>sp|P32744|CLAS2_CAEEL Protein CLASP-2 OS=Caenorhabditis elegans GN=cls-2 PE=1 SV=3
Length = 1020
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 33 DSCVRKCSVFCMVALYKVTRILFPLIIAEE---HPINLVAIKMLTKVIEQNGKGPVELFL 89
D C++ ++ + L KV I LI+ EE P + +KM+T++ E + +
Sbjct: 895 DDCLK--TLATHLPLAKVVNI-SQLILNEEKAQEPKASLVLKMMTRLFEGLQADELSPVV 951
Query: 90 PNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRS 149
++ P ++++Y++ S VRK +V+C+VA+ + G + P++ LS KL L+Q+Y+ R+
Sbjct: 952 DDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRA 1011
Query: 150 QTHSS 154
+ SS
Sbjct: 1012 MSSSS 1016
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 30/47 (63%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVAL 47
M+T++ E + + ++ P ++++Y++ S VRK +V+C+VA+
Sbjct: 934 MMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAM 980
>sp|Q95YF0|CLAP1_CAEEL Protein CLASP-1 OS=Caenorhabditis elegans GN=C07H6.3 PE=3 SV=1
Length = 1378
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%)
Query: 70 IKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSP 129
+KMLT++ + + L + ++ P + AYE+ S VRKC+VF +VAL + G + P
Sbjct: 1289 LKMLTRMFQDIDIEELHLIVNDVAPCFVTAYESMSSTVRKCAVFGLVALVQRVGMQRMEP 1348
Query: 130 YINKLSGAKLKLLQLYIKRSQTHSSSVPTS 159
++ L+ +KL L+ LY+ R+++ S ++
Sbjct: 1349 HLRTLNASKLNLIDLYVGRAKSSESGASSN 1378
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVAL 47
MLT++ + + L + ++ P + AYE+ S VRKC+VF +VAL
Sbjct: 1291 MLTRMFQDIDIEELHLIVNDVAPCFVTAYESMSSTVRKCAVFGLVAL 1337
>sp|Q61KX5|CLAP1_CAEBR Protein CLASP-1 OS=Caenorhabditis briggsae GN=CBG09173 PE=3 SV=2
Length = 1333
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%)
Query: 70 IKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSP 129
+KMLT++ + + + + ++ P + AY++ S VRKC+VF +VAL + G L
Sbjct: 1244 LKMLTRMFQDIDVDELHMIVDDVAPCFVSAYDSTSSSVRKCAVFGLVALVQRVGMPRLET 1303
Query: 130 YINKLSGAKLKLLQLYIKRSQTHSSSVPTS 159
++ KL+ KL L+ LY+ R+++ S ++
Sbjct: 1304 HLRKLNATKLNLIDLYVGRAKSSESGTSSN 1333
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKVTRILFPLIIA 60
MLT++ + + + + ++ P + AY++ S VRKC+VF +VAL V R+ P +
Sbjct: 1246 MLTRMFQDIDVDELHMIVDDVAPCFVSAYDSTSSSVRKCAVFGLVAL--VQRVGMPRL-- 1301
Query: 61 EEHPINLVAIKM 72
E H L A K+
Sbjct: 1302 ETHLRKLNATKL 1313
>sp|Q61QN4|CLAP3_CAEBR Protein CLASP-3 OS=Caenorhabditis briggsae GN=cls-3 PE=3 SV=2
Length = 970
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
Query: 33 DSCVRKCSVFC----MVALYKVTRILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELF 88
D C+R + ++ + KV I P+ ++ +LV +KM+T++ E+ ++
Sbjct: 846 DDCLRTLATHLPLANIINIAKVILIQEPI---DDERASLV-LKMVTRLFEELPADELKNV 901
Query: 89 LPNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKR 148
+ +I P +++AY++ S VRK V+C+VA+ GE ++P+ KL A L+Q+Y+ R
Sbjct: 902 VDDITPCVIKAYQSTSSSVRKTVVYCLVAMVNRVGEQRMAPHFTKLPKAMTNLIQVYVNR 961
Query: 149 S 149
+
Sbjct: 962 A 962
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVAL 47
M+T++ E+ ++ + +I P +++AY++ S VRK V+C+VA+
Sbjct: 885 MVTRLFEELPADELKNVVDDITPCVIKAYQSTSSSVRKTVVYCLVAM 931
>sp|Q03609|CLAP3_CAEEL Protein CLASP-3 OS=Caenorhabditis elegans GN=cls-3 PE=3 SV=3
Length = 983
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 58 IIAEEHPIN----LVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVF 113
+I + PI+ + +KM+T++ E+ + + +I P +++AY++ S VRK V+
Sbjct: 880 VILNQEPIDDERASLVLKMVTRLFEELPAEELNNIVDDITPTIIKAYQSTSSTVRKTVVY 939
Query: 114 CMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRS 149
C+VA+ GE ++P+ KL A L+Q+Y+ R+
Sbjct: 940 CLVAMVNRVGEQRMTPHFTKLPKAMTNLIQVYVNRA 975
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 1 MLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVAL 47
M+T++ E+ + + +I P +++AY++ S VRK V+C+VA+
Sbjct: 898 MVTRLFEELPAEELNNIVDDITPTIIKAYQSTSSTVRKTVVYCLVAM 944
>sp|Q8RWY6|CLASP_ARATH CLIP-associated protein OS=Arabidopsis thaliana GN=CLASP PE=1 SV=1
Length = 1439
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 39 CSVFCMVALYKVTRILFPLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQ 98
+V ++ ++ PL++ E+ + I LTK++ + + + L + +PA+ +
Sbjct: 1317 TTVLSQYDPFRCLSVIVPLLVTEDEKTLVACINCLTKLVGRLSQEELMDQLSSFLPAVFE 1376
Query: 99 AYENQDSCVRKCSVFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKR 148
A+ +Q + VRK VFC+V +Y G++ L PY+ L+ +++L+ +Y R
Sbjct: 1377 AFGSQSADVRKTVVFCLVDIYIMLGKAFL-PYLEGLNSTQVRLVTIYANR 1425
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 2 LTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALY 48
LTK++ + + + L + +PA+ +A+ +Q + VRK VFC+V +Y
Sbjct: 1351 LTKLVGRLSQEELMDQLSSFLPAVFEAFGSQSADVRKTVVFCLVDIY 1397
>sp|P40069|IMB4_YEAST Importin subunit beta-4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP123 PE=1 SV=1
Length = 1113
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 90 PNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSPYINKLSGAKLKLLQLYIKRS 149
P+++P L+Q +D R+ ++F + +L ++F + LSG L L+ S
Sbjct: 120 PDLVPNLIQTASGEDVQTRQTAIFILFSLLEDF--------TSSLSGHIDDFLALF---S 168
Query: 150 QTHSSSVPTSLSIRSL 165
QT + P+SL IRSL
Sbjct: 169 QTIND--PSSLEIRSL 182
>sp|Q86C65|TOR_DICDI Target of rapamycin OS=Dictyostelium discoideum GN=tor PE=1 SV=1
Length = 2380
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 42/177 (23%)
Query: 17 FLPNIMPALLQAYENQDSCVRK---------------------CSVFCMVALYKVTRILF 55
FLP IMP L A + R+ +VF ++ Y + +L
Sbjct: 864 FLPQIMPPFLHAMNTGEPLFREFLFQQLGSLVSIVKQHIRDYLVNVFALIEKYWNSNLLI 923
Query: 56 PLIIAEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCM 115
P+I L + I +++LPN++P +L S R + +
Sbjct: 924 PII-------------KLVEEISSALNDEFKVYLPNLIPQMLNVLHTDRSPKRSPTTKVL 970
Query: 116 VALYKEFGESVLSPYINKLSGAKLKLLQLYIKRSQTHSSSVPTSLSIRSLERVCSVL 172
AL + FG + L Y++ + A +KL + Q ++ +L+I+++ R+C L
Sbjct: 971 RAL-EVFGTN-LDDYLHLVIPAIVKLFE------QVDVTTQVRTLAIQTIGRLCKKL 1019
>sp|E1BLZ4|ZFY26_BOVIN Zinc finger FYVE domain-containing protein 26 OS=Bos taurus
GN=ZFYVE26 PE=3 SV=1
Length = 2515
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 141 LLQLYIKRSQTHSSSVPTSLSIRSLERVCSVLILTS 176
L Y+ R Q + S+P SL + LE V S+L++TS
Sbjct: 544 LFSTYLARCQQYLCSIPDSLCLELLENVFSLLLITS 579
>sp|P38737|ECM29_YEAST Proteasome component ECM29 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ECM29 PE=1 SV=1
Length = 1868
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 50 VTRILFPLII----AEEHPINLVAIKMLTKVIEQNGKGPVELFLPNIMPALLQAYENQDS 105
V + PLI E+ + + K+ T+ +G G V+L+LP I+ L ++ D
Sbjct: 1504 VASVFMPLIFIACNDEDKDLETLYNKIWTEA-SSSGAGTVKLYLPEILNVLCVNIKSNDF 1562
Query: 106 CVRKCSVFCMVALYKEFGESVLSPYINKL 134
+RK ++ L +S+ P I KL
Sbjct: 1563 SIRKTCAKSVIQLCGGINDSIPYPQIVKL 1591
>sp|Q7S9L2|STU1_NEUCR Protein stu-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=stu-1 PE=3 SV=1
Length = 1136
Score = 30.0 bits (66), Expect = 8.7, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 19 PNIMPALLQAYENQDSCVRKCSVFCMVALYKVT-----RILFPLIIAEEHP-INLVAIKM 72
P+ +P ++ +Q R+ +V + LYKV R + + + ++P +++
Sbjct: 93 PHTLPVVVDKLGDQKDKFRQIAVQALTTLYKVAPVDVERSVRNIAMVGKNPRAKEMSMHW 152
Query: 73 LTKVIEQNGKGPVELFLPNIMPALLQAYENQDSCVRKCSVFCMVALYKEFGESVLSPYIN 132
L + ++ G L +P L++ E+ D VR + ++ L+K + S
Sbjct: 153 LLQTHQEQG-----LQFRAYVPTLMELLEDADGSVRDVAKTTVIELFKNAPNTAKSDLKR 207
Query: 133 KLSGAKLK--LLQLYIKRSQTHSSSVPT 158
+L K++ + Q+ +K SSSV +
Sbjct: 208 QLKNFKVRPAIEQVIVKELNNPSSSVSS 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,339,428
Number of Sequences: 539616
Number of extensions: 2161302
Number of successful extensions: 4989
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4920
Number of HSP's gapped (non-prelim): 76
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)