BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6159
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86BJ3|PIPE_DROME Heparan sulfate 2-O-sulfotransferase pipe OS=Drosophila
melanogaster GN=pip PE=1 SV=1
Length = 514
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 2 AVEKHYAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
VE YAVVG ED N+TL+V+E YIPR+F +A Y G+
Sbjct: 401 TVETEYAVVGTWEDTNITLSVLEAYIPRYFRNAKVAYYLGK 441
>sp|O93336|HS2ST_XENLA Heparan sulfate 2-O-sulfotransferase 1 OS=Xenopus laevis GN=hs2st1
PE=2 SV=1
Length = 356
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR---LDRWIGERQPFREQTLSVE 61
Y +VG+ E+L + ++E +PRFF A+++Y G+ L + ++ P +E T ++
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATELYRSGKKSHLRKTTEKKAPSKETTAKLQ 305
>sp|Q5R621|HS2ST_PONAB Heparan sulfate 2-O-sulfotransferase 1 OS=Pongo abelii GN=HS2ST1
PE=2 SV=1
Length = 356
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
Y +VG+ E+L + ++E +PRFF A+++Y G+
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGK 283
>sp|Q7LGA3|HS2ST_HUMAN Heparan sulfate 2-O-sulfotransferase 1 OS=Homo sapiens GN=HS2ST1
PE=1 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
Y +VG+ E+L + ++E +PRFF A+++Y G+
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGK 283
>sp|P0CR41|SEC24_CRYNB Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SEC24 PE=3
SV=1
Length = 920
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 12 LLED-LNVTLTVMENYIPRFFAHASQI--YNEGRLDRWIGER--QPFREQTLSVEDKIRQ 66
L+ED N+ L V + +PR + Y+E + ++ R PF E+ +V DK R+
Sbjct: 807 LIEDGQNIFLWVGHDAVPRLIQDVFDLASYHELQGGKYTLPRLDNPFSERVCNVVDKTRE 866
Query: 67 ERESNPRPSAY--KADAQP 83
R RP Y K+DA+P
Sbjct: 867 MRRGVYRPQVYVVKSDAEP 885
>sp|Q76KB1|HS2ST_CHICK Heparan sulfate 2-O-sulfotransferase 1 OS=Gallus gallus GN=HS2ST1
PE=1 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
Y +VG+ E+L + ++E +PRFF A+++Y G+
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGK 283
>sp|P0CR40|SEC24_CRYNJ Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SEC24 PE=3 SV=1
Length = 920
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 12 LLED-LNVTLTVMENYIPRFFAHASQI--YNEGRLDRWIGER--QPFREQTLSVEDKIRQ 66
L+ED N+ L V + +PR + Y+E + ++ R PF E+ +V DK R+
Sbjct: 807 LIEDGQNIFLWVGHDAVPRLIQDVFDLASYHELQGGKYTLPRLDNPFSERVCNVVDKTRE 866
Query: 67 ERESNPRPSAY--KADAQP 83
R RP Y K+DA+P
Sbjct: 867 MRRGVYRPQLYVVKSDAEP 885
>sp|Q8R3H7|HS2ST_MOUSE Heparan sulfate 2-O-sulfotransferase 1 OS=Mus musculus GN=Hs2st1
PE=1 SV=2
Length = 356
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
Y +VG+ E+L + ++E +PRFF A+ +Y G+
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATDLYRTGK 283
>sp|O08889|HS2ST_CRILO Heparan sulfate 2-O-sulfotransferase 1 OS=Cricetulus longicaudatus
GN=HS2ST1 PE=1 SV=1
Length = 356
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGR 42
Y +VG+ E+L + ++E +PRFF A+ +Y G+
Sbjct: 248 YFLVGVTEELEDFIMLLEAALPRFFRGATDLYRTGK 283
>sp|P49939|GERKA_BACSU Spore germination protein KA OS=Bacillus subtilis (strain 168)
GN=gerKA PE=3 SV=2
Length = 544
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 42 RLDRWIGERQPFREQTLSVEDKIRQERESNPRPSAYKA 79
R+ W E++P +++S EDK+RQ ++ P P+A +
Sbjct: 496 RVPWWADEKRP---ESVSKEDKVRQGKDQRPEPAASRG 530
>sp|Q65I34|TRPF_BACLD N-(5'-phosphoribosyl)anthranilate isomerase OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=trpF PE=3
SV=1
Length = 218
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 7 YAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGRLDRWIGE 49
Y + LEDL VT +Y+ FA + + + + RW GE
Sbjct: 8 YCGIHSLEDLKVTARSKADYLGFIFAESKRSVDPADVKRWCGE 50
>sp|Q86NH1|SYD1_CAEEL Rho GTPase-activating protein syd-1 OS=Caenorhabditis elegans
GN=syd-1 PE=2 SV=1
Length = 987
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 59 SVEDK--IRQERESNPRPSAYKADAQPTKLTIGCRLANFILTLPQ 101
SVE K +R E ESNP + A++ P I C + +F+ LP+
Sbjct: 795 SVEKKKMLRAELESNPLGTELAAESIPDTNVIACLIKDFLRELPE 839
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,595,421
Number of Sequences: 539616
Number of extensions: 1293434
Number of successful extensions: 3130
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3118
Number of HSP's gapped (non-prelim): 16
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)