Query psy6159
Match_columns 101
No_of_seqs 115 out of 121
Neff 3.7
Searched_HMMs 13730
Date Fri Aug 16 19:09:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6159.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6159hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ei5a2 b.61.3.1 (A:418-520) D 21.6 12 0.00086 24.3 0.6 13 84-96 84-96 (103)
2 d2nzca1 d.58.18.14 (A:2-81) Hy 17.3 49 0.0036 19.9 2.8 25 4-28 1-26 (80)
3 d1cdza_ c.15.1.1 (A:) DNA-repa 15.4 16 0.0012 20.6 0.0 9 27-35 2-10 (96)
4 d3b7sa3 d.92.1.13 (A:209-460) 12.3 73 0.0053 20.7 2.8 24 17-40 179-204 (252)
5 d2fgca1 d.58.18.6 (A:105-187) 11.1 31 0.0023 20.4 0.5 18 9-26 48-65 (83)
6 d2f1fa2 d.58.18.6 (A:78-163) A 11.0 42 0.0031 19.8 1.1 18 9-26 47-64 (86)
7 d1rl1a_ b.15.1.3 (A:) Suppress 10.6 57 0.0042 18.3 1.6 24 71-94 22-45 (92)
8 d2q07a2 c.18.1.4 (A:244-393) U 9.5 2.5E+02 0.018 18.4 5.5 60 6-70 71-144 (150)
9 d1s6ya2 d.162.1.2 (A:173-445) 8.7 32 0.0023 23.7 -0.2 19 16-34 251-269 (270)
10 d1yzha1 c.66.1.53 (A:8-211) tR 8.1 83 0.006 20.6 1.8 36 64-99 2-49 (204)
No 1
>d1ei5a2 b.61.3.1 (A:418-520) D-aminopeptidase, middle and C-terminal domains {Ochrobactrum anthropi [TaxId: 529]}
Probab=21.58 E-value=12 Score=24.25 Aligned_cols=13 Identities=46% Similarity=0.797 Sum_probs=10.3
Q ss_pred cceeeeeeeehhh
Q psy6159 84 TKLTIGCRLANFI 96 (101)
Q Consensus 84 ~~~~~~~~~~~~~ 96 (101)
|-+||||-||.=|
T Consensus 84 tg~t~GCWLAR~i 96 (103)
T d1ei5a2 84 TGLSVGCWLARGV 96 (103)
T ss_dssp EEEEEEETTEEEE
T ss_pred EEEEEEEEEeecc
Confidence 6789999998643
No 2
>d2nzca1 d.58.18.14 (A:2-81) Hypothetical protein TM1266 {Thermotoga maritima [TaxId: 2336]}
Probab=17.31 E-value=49 Score=19.91 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=16.2
Q ss_pred cceeeEEee-ehhhhHHHHHHHHhhc
Q psy6159 4 EKHYAVVGL-LEDLNVTLTVMENYIP 28 (101)
Q Consensus 4 e~~Y~vVGi-lEeln~tL~VLE~~lP 28 (101)
|+.|++||+ .|+-++.-.-+..+|-
T Consensus 1 e~ri~vigIive~r~~~a~kVn~iL~ 26 (80)
T d2nzca1 1 EKRFYILTIVVEDREKAYRQVNELLH 26 (80)
T ss_dssp CCEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CcEEEEEEEEEeChHHhHHHHHHHHH
Confidence 568999999 5777655444444443
No 3
>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.37 E-value=16 Score=20.64 Aligned_cols=9 Identities=33% Similarity=0.811 Sum_probs=6.0
Q ss_pred hchhhhhHH
Q psy6159 27 IPRFFAHAS 35 (101)
Q Consensus 27 lPrfFkGA~ 35 (101)
||.||+|..
T Consensus 2 lpd~F~g~~ 10 (96)
T d1cdza_ 2 LPDFFQGKH 10 (96)
T ss_dssp CCCTTTTCE
T ss_pred cccccCCcE
Confidence 577777753
No 4
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.32 E-value=73 Score=20.65 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=19.1
Q ss_pred hHHHHHHHHhh--chhhhhHHHHHhc
Q psy6159 17 NVTLTVMENYI--PRFFAHASQIYNE 40 (101)
Q Consensus 17 n~tL~VLE~~l--PrfFkGA~~~Y~~ 40 (101)
...|..||..| +.+|+.++..|.+
T Consensus 179 a~vl~mL~~~iG~~~~f~~~lr~yl~ 204 (252)
T d3b7sa3 179 FALLFYLEQLLGGPEIFLGFLKAYVE 204 (252)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46789999998 4789888888765
No 5
>d2fgca1 d.58.18.6 (A:105-187) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=11.10 E-value=31 Score=20.38 Aligned_cols=18 Identities=6% Similarity=0.254 Sum_probs=14.8
Q ss_pred EEeeehhhhHHHHHHHHh
Q psy6159 9 VVGLLEDLNVTLTVMENY 26 (101)
Q Consensus 9 vVGilEeln~tL~VLE~~ 26 (101)
++|.-+++++++..|+.+
T Consensus 48 ~tg~~~~id~fi~~l~~~ 65 (83)
T d2fgca1 48 ITGARSKVEAFINLLPQK 65 (83)
T ss_dssp EEECHHHHHHHHHHSCGG
T ss_pred EeCCHHHHHHHHHHhhhc
Confidence 578899999999998753
No 6
>d2f1fa2 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=11.00 E-value=42 Score=19.81 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=15.2
Q ss_pred EEeeehhhhHHHHHHHHh
Q psy6159 9 VVGLLEDLNVTLTVMENY 26 (101)
Q Consensus 9 vVGilEeln~tL~VLE~~ 26 (101)
++|.-+++++++..|+.+
T Consensus 47 ~tG~~~~id~fi~~l~~~ 64 (86)
T d2f1fa2 47 LAGTSGKLDAFLASIRDV 64 (86)
T ss_dssp EEECHHHHHHHHHHHTTT
T ss_pred EeCCHHHHHHHHHHhhcc
Confidence 578899999999988765
No 7
>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.61 E-value=57 Score=18.28 Aligned_cols=24 Identities=13% Similarity=0.181 Sum_probs=19.5
Q ss_pred CCCccccccccCccceeeeeeeeh
Q psy6159 71 NPRPSAYKADAQPTKLTIGCRLAN 94 (101)
Q Consensus 71 n~t~E~~~~~~~~~~~~~~~~~~~ 94 (101)
+.+.+.++.++++..+++.|..++
T Consensus 22 ~~~~~~v~v~~~~~~l~v~~~~~~ 45 (92)
T d1rl1a_ 22 NVQKNDVNVEFSEKELSALVKLPS 45 (92)
T ss_dssp SCCGGGEEEECSSSCEEEEEECTT
T ss_pred CCChHheEEEEecCEEEEEEEcCC
Confidence 456788999999999999887544
No 8
>d2q07a2 c.18.1.4 (A:244-393) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=9.50 E-value=2.5e+02 Score=18.45 Aligned_cols=60 Identities=8% Similarity=0.076 Sum_probs=31.7
Q ss_pred eeeEEeee--hhhhHHHHHHHHhhc------------hhhhhHHHHHhcccccccccccccccCCCCCCCHHHHHHHHh
Q psy6159 6 HYAVVGLL--EDLNVTLTVMENYIP------------RFFAHASQIYNEGRLDRWIGERQPFREQTLSVEDKIRQERES 70 (101)
Q Consensus 6 ~Y~vVGil--Eeln~tL~VLE~~lP------------rfFkGA~~~Y~~~~~~~~~~tkn~~Kp~~~~~Seev~~~lr~ 70 (101)
++.|-|-| ||++-.=.+|++++. .=|+-+.......... ...-+.... +.|+++.+-|++
T Consensus 71 D~pvtg~w~~~E~~~i~~~l~~~l~r~~y~~iIah~~~~~~~i~~~~~e~~~~--~i~~T~~~~---~ts~esL~~L~~ 144 (150)
T d2q07a2 71 DTPVTGHWSEEEVSFVAGWLKRFIEKGGFRKVVAHVTGGYRKVVERVEDEVEA--EVVYTAEKD---VLSDESIERLKQ 144 (150)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHTCSEEEECCCTHHHHHHHHHHTTCSS--EEEECCSSC---TTSHHHHHHHHH
T ss_pred CCCccccccHHHHHHHHHHHHHHHHhCCCcEEEEECCccHHHHHHHHhhhcCC--eeeeccCCC---CCCHHHHHHHHH
Confidence 35677998 788888889999884 3344444443322111 112222233 579999988864
No 9
>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=8.72 E-value=32 Score=23.75 Aligned_cols=19 Identities=37% Similarity=0.796 Sum_probs=14.0
Q ss_pred hhHHHHHHHHhhchhhhhH
Q psy6159 16 LNVTLTVMENYIPRFFAHA 34 (101)
Q Consensus 16 ln~tL~VLE~~lPrfFkGA 34 (101)
+++.|..=..|||.|++++
T Consensus 251 ldeli~a~~~~LP~f~k~~ 269 (270)
T d1s6ya2 251 LDEMLEAHKEYLPQFFKQA 269 (270)
T ss_dssp HHHHHHHTGGGCTTTCCCC
T ss_pred HHHHHHHhHHHhHhhhhhc
Confidence 4556666678899998864
No 10
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=8.11 E-value=83 Score=20.60 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=0.0
Q ss_pred HHHHHHhCCCc-----cccccc-------cCccceeeeeeeehhhccC
Q psy6159 64 IRQERESNPRP-----SAYKAD-------AQPTKLTIGCRLANFILTL 99 (101)
Q Consensus 64 v~~~lr~n~t~-----E~~~~~-------~~~~~~~~~~~~~~~~~~~ 99 (101)
+.++|..+... +.+|.+ -+|.-|-|||--..+++.+
T Consensus 2 ~~~~~~~~p~~~~~~p~~~~~~w~~~f~~~~plvLdIGcG~G~~~~~l 49 (204)
T d1yzha1 2 ATELLEANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGM 49 (204)
T ss_dssp HHHHHHTCTTTEECCGGGTTTTHHHHHTSCCCEEEEESCTTSHHHHHH
T ss_pred hhHHHHhCcceEecChHHhhccHHHHcCCCCCeEEEEeccCCHHHHHH
Done!