BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy6159
MAVEKHYAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGRLDRWIGERQPFREQTLSV
EDKIRQERESNPRPSAYKADAQPTKLTIGCRLANFILTLPQ

High Scoring Gene Products

Symbol, full name Information P value
pip
pipe 		protein from Drosophila melanogaster 8.4e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6159
        (101 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0003089 - symbol:pip "pipe" species:7227 "Drosophi...   113  8.4e-06   1


>FB|FBgn0003089 [details] [associations]
            symbol:pip "pipe" species:7227 "Drosophila melanogaster"
            [GO:0007313 "maternal specification of dorsal/ventral axis, oocyte,
            soma encoded" evidence=TAS] [GO:0016485 "protein processing"
            evidence=IGI] [GO:0008063 "Toll signaling pathway" evidence=TAS]
            [GO:0004394 "heparan sulfate 2-O-sulfotransferase activity"
            evidence=ISS;NAS] [GO:0009950 "dorsal/ventral axis specification"
            evidence=IGI;IMP;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005694 "chromosome" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0048477 "oogenesis" evidence=NAS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008146 "sulfotransferase activity" evidence=IMP]
            [GO:0040014 "regulation of multicellular organism growth"
            evidence=IMP] [GO:0009880 "embryonic pattern specification"
            evidence=IMP] [GO:0034483 "heparan sulfate sulfotransferase
            activity" evidence=IDA] [GO:0034481 "chondroitin sulfotransferase
            activity" evidence=IDA] InterPro:IPR005331 InterPro:IPR007734
            Pfam:PF03567 GO:GO:0005634 GO:GO:0005694 EMBL:AE014296
            GO:GO:0030173 GO:GO:0040014 GO:GO:0009880 GO:GO:0016485
            GO:GO:0008063 GO:GO:0007313 GeneTree:ENSGT00530000063408
            GO:GO:0004394 PANTHER:PTHR12129 EMBL:AF102135 EMBL:AF102136
            EMBL:AF263993 EMBL:BT010278 RefSeq:NP_524158.2 RefSeq:NP_730402.1
            RefSeq:NP_788529.1 RefSeq:NP_788530.1 RefSeq:NP_788531.1
            RefSeq:NP_788532.1 RefSeq:NP_788533.1 RefSeq:NP_788534.1
            RefSeq:NP_788535.1 RefSeq:NP_788536.1 RefSeq:NP_788537.1
            UniGene:Dm.19224 ProteinModelPortal:Q86BJ3 SMR:Q86BJ3 IntAct:Q86BJ3
            MINT:MINT-320022 STRING:Q86BJ3 PRIDE:Q86BJ3
            EnsemblMetazoa:FBtr0075013 GeneID:40104 KEGG:dme:Dmel_CG9614
            UCSC:CG9614-RA CTD:5304 FlyBase:FBgn0003089 eggNOG:NOG285774
            InParanoid:Q86BJ3 OMA:GVLEDLN OrthoDB:EOG4NK99M PhylomeDB:Q86BJ3
            GenomeRNAi:40104 NextBio:817013 Bgee:Q86BJ3 GermOnline:CG9614
            Uniprot:Q86BJ3
        Length = 514

 Score = 113 (44.8 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query:     3 VEKHYAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGRLDR 45
             VE  YAVVG  ED N+TL+V+E YIPR+F +A   Y  G+ DR
Sbjct:   402 VETEYAVVGTWEDTNITLSVLEAYIPRYFRNAKVAYYLGK-DR 443


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      101       101   0.00091  102 3  11 22  0.39    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.92u 0.09s 12.01t   Elapsed:  00:00:21
  Total cpu time:  11.92u 0.09s 12.01t   Elapsed:  00:00:21
  Start:  Thu Aug 15 14:19:29 2013   End:  Thu Aug 15 14:19:50 2013

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