RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6159
         (101 letters)



>d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini
           [TaxId: 2094]}
          Length = 409

 Score = 23.6 bits (50), Expect = 7.1
 Identities = 8/51 (15%), Positives = 25/51 (49%)

Query: 2   AVEKHYAVVGLLEDLNVTLTVMENYIPRFFAHASQIYNEGRLDRWIGERQP 52
           A ++H   V  L+  ++ +  + + +   +  ASQ   +  ++ ++ + +P
Sbjct: 53  ARKEHKQFVAELKANDINVVELIDLVAETYDLASQEAKDKLIEEFLEDSEP 103


>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 178

 Score = 23.2 bits (49), Expect = 8.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 45  RWIGERQPFREQTLSVEDKIRQERESNP 72
           R IG    F  Q   + D++ +E +  P
Sbjct: 151 REIGPNDGFLAQLCQLNDRLAKEGKLKP 178


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0616    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 357,374
Number of extensions: 13950
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 5
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.1 bits)