BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6163
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GNE2|RL23_AEDAE 60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1
Length = 140
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/129 (90%), Positives = 122/129 (94%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGSAG KFRISL LPVGAVINCADNTGAKNL+VIAV G++GRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|P48159|RL23_DROME 60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=2
SV=2
Length = 140
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/129 (89%), Positives = 122/129 (94%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGG+AG KFRISL LPVGAV+NCADNTGAKNL+VIAV G++GRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|P62832|RL23_RAT 60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|P62831|RL23_PIG 60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|P62830|RL23_MOUSE 60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=1 SV=1
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|Q90YU5|RL23_ICTPU 60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|P62829|RL23_HUMAN 60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|Q3T057|RL23_BOVIN 60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|Q6PC14|RL23_DANRE 60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1
Length = 140
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/129 (84%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLP+AG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|Q5REU2|RL23_PONAB 60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1
Length = 140
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/129 (84%), Positives = 121/129 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KG+LNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
VAKE A +
Sbjct: 121 VAKECADLW 129
>sp|Q9XSU3|RL23_CANFA 60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1
Length = 140
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/129 (83%), Positives = 119/129 (92%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+KGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKP LRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
V KE A +
Sbjct: 121 VXKECADLW 129
>sp|P48158|RL23_CAEEL 60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=3
SV=1
Length = 140
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/128 (83%), Positives = 118/128 (92%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGG++GAKFRISL LPVGAV+NCADNTGAKNLFVI+V G++GRLNRLP+AG GDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
FV +VKKGKPELRKKV+ VVIRQRK FRR+DG FIYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 FVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQI 128
VAKE A +
Sbjct: 121 VAKECADL 128
>sp|Q93140|RL23_BRUMA 60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1
Length = 140
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 117/129 (90%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGG++GAKFRISL LPVGAV+NCADNTGAKNLFVIAV G+KGRLNRLP+AG GDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
FVA+VKKGKPELRKKV+ AVV+RQRK +RR DG IYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 FVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 VAKENAQIC 129
V KE A +
Sbjct: 121 VTKECADLW 129
>sp|Q07760|RL23_TOBAC 60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1
Length = 140
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 117/128 (91%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGSAG KFR+SL LPV A INCADNTGAKNL++I+V+G+KGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKP+LRKKVMPAVV+RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120
Query: 121 VAKENAQI 128
+ KE A +
Sbjct: 121 IGKECADL 128
>sp|P49690|RL23_ARATH 60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2
SV=3
Length = 140
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGG++G KFR+SL LPV A +NCADNTGAKNL++I+V+G+KGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKP+LRKKV+PAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 121 VAKENAQI 128
+ KE A +
Sbjct: 121 IGKECADL 128
>sp|Q9XEK8|RL23_TORRU 60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1
Length = 139
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/129 (77%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
MSKRGRGGS+G KFR+SL LPVGAV+NCADNTGAKNL+VI+ GV+GRLNRLPAA GDM
Sbjct: 1 MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 59
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEM SAITGP
Sbjct: 60 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 119
Query: 121 VAKENAQIC 129
+ KE A +
Sbjct: 120 IGKECADLW 128
>sp|O42867|RL23_SCHPO 60S ribosomal protein L23 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl23a PE=3 SV=1
Length = 139
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 110/125 (88%)
Query: 4 RGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVA 63
RGRG ++G K+R++L LPV A++NCADN+GAKNL++++V G RLNRLPAA GDM +A
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLA 62
Query: 64 TVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 123
TVKKGKP+LRKK+MPA+V+RQRK +RR+DGV++YFEDNAGVIVN KGEMKGSAITGPVAK
Sbjct: 63 TVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAK 122
Query: 124 ENAQI 128
E A +
Sbjct: 123 ECADL 127
>sp|P0CX42|RL23B_YEAST 60S ribosomal protein L23-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23B PE=1 SV=1
Length = 137
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/122 (74%), Positives = 105/122 (86%)
Query: 8 GSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKK 67
G+ G KFRISL LPVGA++NCADN+GA+NL++IAV+G RLNRLPAA GDM +ATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
GKPELRKKVMPA+V+RQ K +RRRDGVF+YFEDNAGVI N KGEMKGSAITGPV KE A
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 IC 129
+
Sbjct: 125 LW 126
>sp|P0CX41|RL23A_YEAST 60S ribosomal protein L23-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23A PE=1 SV=1
Length = 137
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/122 (74%), Positives = 105/122 (86%)
Query: 8 GSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKK 67
G+ G KFRISL LPVGA++NCADN+GA+NL++IAV+G RLNRLPAA GDM +ATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
GKPELRKKVMPA+V+RQ K +RRRDGVF+YFEDNAGVI N KGEMKGSAITGPV KE A
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 IC 129
+
Sbjct: 125 LW 126
>sp|Q54G86|RL23_DICDI 60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3
SV=1
Length = 136
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
Query: 9 SAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKG 68
+ G+ +R+SL LPVGAV+N ADN+GAKNL+VIAV+G+KGRLNRLP+AG GDM +ATVKKG
Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKG 65
Query: 69 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQI 128
KPELRKKV +V+RQRK ++R+DGV+IYFEDNAGV+ N KGE+KG+ I GPVAKE + +
Sbjct: 66 KPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDL 124
>sp|Q94776|RL23_TRYCR 60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1
Length = 141
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
Query: 11 GAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKP 70
G +FR+SLALPVGAV+NCADNTGAKNL++I+V+G GRLNRLPAA GD+ +A+VKKGKP
Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKP 69
Query: 71 ELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG-EMKGSAITGPVAKENAQIC 129
ELR+KV+ AV+IRQRK +RR+DG IYFEDNAGVIVN++G + + S I GPVAKE +
Sbjct: 70 ELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPS 129
Query: 130 GHGI 133
G I
Sbjct: 130 GPKI 133
>sp|P0DJ53|RL23_TETTS 60S ribosomal protein L23 OS=Tetrahymena thermophila (strain SB210)
GN=RPL23 PE=1 SV=1
Length = 141
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 105/125 (84%)
Query: 4 RGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVA 63
RGRGG G K ++SL LPVGAV+NCADN+GAKNL+ IA G+KG L++LP+A GDM +
Sbjct: 5 RGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGDMILC 64
Query: 64 TVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 123
+VKKG P+LRKKV+ A+VIRQR+P+RRRDGVFIYFEDNAGVI N KGEMKGS ITGPVAK
Sbjct: 65 SVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITGPVAK 124
Query: 124 ENAQI 128
E A I
Sbjct: 125 ECADI 129
>sp|A3DNB7|RL14_STAMF 50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1
Length = 140
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 92/127 (72%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
M K+G+G A ++ RI+ L VG+ + ADN+GAK + +I V G KGRL R+P AG GD+
Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDL 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
V TVKKG PE+RK+V+ AV++RQ++PFRR DG ++ FEDNA IV +G KGS I GP
Sbjct: 61 VVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGP 120
Query: 121 VAKENAQ 127
+AKE A+
Sbjct: 121 IAKEVAE 127
>sp|Q9HIR9|RL14_THEAC 50S ribosomal protein L14P OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%)
Query: 15 RISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRK 74
R + LP+GA I CADNTGA+++ +I V+ G+ R+PAAG GDMF+A+VKKG PE+R
Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRS 66
Query: 75 KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
KV+ AVVIRQ++P+RR DG + FEDNA V+V GE++GS I GPVA+E A+
Sbjct: 67 KVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAE 119
>sp|Q97BW6|RL14_THEVO 50S ribosomal protein L14P OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 8 GSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKK 67
G AG + R LP+GA I CADNTGA+++ +I V+ G+ R+PAAG GDMF+A+VKK
Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKK 59
Query: 68 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
G PE+R KV+ AVVIRQ++P+RR DG + FEDNA V+V GE++GS I GPVA+E A+
Sbjct: 60 GTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAE 119
>sp|Q6L1B7|RL14_PICTO 50S ribosomal protein L14P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl14p
PE=3 SV=1
Length = 132
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 82/108 (75%)
Query: 20 LPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMPA 79
LP+GA+I C DNTGAK + +I V+ + R+PAAG GDMF+A+VKKG PE+R KV+ A
Sbjct: 12 LPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYA 71
Query: 80 VVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
VV+RQR+P+RR DG I FEDNA V+V GE++GS I GPVA+E A+
Sbjct: 72 VVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAE 119
>sp|Q8SRA7|RL23_ENCCU 60S ribosomal protein L23 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL23 PE=3 SV=1
Length = 146
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 88/120 (73%)
Query: 9 SAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKG 68
S +++++ + V ++ CADN+GAK L I V+ +GRLNRLPAA GD+ V +VKKG
Sbjct: 15 SIKPRYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKG 74
Query: 69 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQI 128
KPELRKKV A++IRQ+K +RR DG I FEDNA V++NNKGE++G+ I GPV +E A +
Sbjct: 75 KPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADM 134
>sp|A2BMC9|RL14_HYPBU 50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl14p PE=3 SV=1
Length = 138
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%)
Query: 10 AGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGK 69
AG + I+ L VG+ + ADN+GAK +I V G KGRL R+P A GDM V TVKKG
Sbjct: 8 AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGT 67
Query: 70 PELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
PE+RK+V+ A+VIRQR+P+RR DG +I FEDNA VIV+ G KGS I GPVA+E A+
Sbjct: 68 PEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAE 125
>sp|Q9YF82|RL14_AERPE 50S ribosomal protein L14P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl14p
PE=3 SV=1
Length = 140
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 93/127 (73%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
M+K+ + G +++ ++ L VG+ + ADN+GAK + +I+V VK RL RLP+AG GD+
Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDL 60
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
V +VKKG P++R++V+ AVV+RQR+PFRR DG ++ FEDNA VIVN G +GS + GP
Sbjct: 61 VVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGP 120
Query: 121 VAKENAQ 127
+A+E A+
Sbjct: 121 IAREAAE 127
>sp|O28364|RL14_ARCFU 50S ribosomal protein L14P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
I ALP GA + CADNTGA+ L +IAV+G KG R PAAG GD+ V TVKKG PE+RK+
Sbjct: 8 IPRALPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQ 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
V AV++RQRK +RR DG + FEDNA VI N +GE +GS I G VA+E A+
Sbjct: 68 VHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAE 119
>sp|A6UWU8|RL14_META3 50S ribosomal protein L14P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1
Length = 132
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 80/109 (73%)
Query: 19 ALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMP 78
+LP GA + CADNTGAK L +IAV+G KG RLPA G G + +VKKG PE+RK+V+P
Sbjct: 11 SLPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLP 70
Query: 79 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
A++IRQ+K +RR DG + FEDNA VIV +G KGS I GPVAKE A+
Sbjct: 71 AIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAE 119
>sp|Q8TW20|RL14_METKA 50S ribosomal protein L14P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl14p PE=3 SV=1
Length = 133
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 81/109 (74%)
Query: 19 ALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMP 78
ALPVGA + CADNTGA+ L +IAV+G KG RLP AG GDM V +VK+G P++RK+V+
Sbjct: 12 ALPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVN 71
Query: 79 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
AV++RQRK +RR DG + FEDNA VIV G +GS I GPVAKE A+
Sbjct: 72 AVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAE 120
>sp|P54037|RL14_METJA 50S ribosomal protein L14P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 77/109 (70%)
Query: 19 ALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMP 78
ALPVGA CADNTGAK + +IAV+ KG RLP A GDM + TVKKG PE+RK+V+P
Sbjct: 11 ALPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLP 70
Query: 79 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
AVVIRQRK RR DG + F DNA VIV G KGS I GPVAKE A+
Sbjct: 71 AVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAE 119
>sp|Q6LXE3|RL14_METMP 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl14p PE=3 SV=1
Length = 132
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
I +LP GA + CADNTGAK L VIAV+ G + RLPA G G M +VKKG PE+RK+
Sbjct: 8 IVRSLPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQ 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
V+PA++IRQ+K +RR DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 68 VLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAE 119
>sp|A9A9Q4|RL14_METM6 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl14p PE=3 SV=1
Length = 132
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 80/112 (71%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
I +LP GA + CADNTGAK L VIAV+ G + RLPA G G M +VKKG PE+RK+
Sbjct: 8 IVRSLPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQ 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
V+PA++IRQ+K ++R DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 68 VLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAE 119
>sp|A6VGZ5|RL14_METM7 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl14p PE=3 SV=1
Length = 132
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 80/112 (71%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
I +LP GA + CADNTGAK L +IAV+ G + RLPA G G M +VKKG PE+RK+
Sbjct: 8 IVRSLPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQ 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
V+PA++IRQ+K ++R DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 68 VLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAE 119
>sp|O24787|RL14_HALSA 50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl14p PE=3 SV=1
Length = 132
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%)
Query: 13 KFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPEL 72
K I+ L G++I CADNTGA+ L + +V G +GR NR P AG GD +V KG PE+
Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEM 64
Query: 73 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQICG 130
R++V+ AVV+RQRKP RR DG + FEDNA VI+++ GE +G+ I GP+++E A+ G
Sbjct: 65 RRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYG 122
>sp|B0R666|RL14_HALS3 50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1
Length = 132
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%)
Query: 13 KFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPEL 72
K I+ L G++I CADNTGA+ L + +V G +GR NR P AG GD +V KG PE+
Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEM 64
Query: 73 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQICG 130
R++V+ AVV+RQRKP RR DG + FEDNA VI+++ GE +G+ I GP+++E A+ G
Sbjct: 65 RRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYG 122
>sp|A0B9W0|RL14_METTP 50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl14p PE=3 SV=1
Length = 132
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 83/117 (70%)
Query: 11 GAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKP 70
G K +I ++ G + CADNTGA+ LFV++V+ +G NR P AG GDM V +VKKG P
Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTP 62
Query: 71 ELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
E+RK++ AV+IRQ+K FRR DG+ + FEDNA VI ++ G KGS I GPVA+E A+
Sbjct: 63 EMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAE 119
>sp|A4FWB1|RL14_METM5 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl14p PE=3 SV=1
Length = 132
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 80/112 (71%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
I +LP GA + CADNTGAK L VIAV+ G + RLPA G G M +VKKG PE+RK+
Sbjct: 8 IVRSLPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQ 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
V+PA++IRQ+K ++R DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 68 VLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAE 119
>sp|A6UQ54|RL14_METVS 50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1
Length = 132
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 80/109 (73%)
Query: 19 ALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMP 78
+LP GA + CADNTGAK L VIAV+ G + RLP+AG G + +VKKG PE+RK+V+P
Sbjct: 11 SLPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLP 70
Query: 79 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
A++IRQ+K ++R DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 71 AIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAE 119
>sp|P14031|RL14_METVA 50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p
PE=3 SV=1
Length = 132
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 80/109 (73%)
Query: 19 ALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMP 78
+LP GA + CADNTGAK L VIAV+ G + RLP+AG G + +VKKG PE+RK+V+P
Sbjct: 11 SLPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLP 70
Query: 79 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
A++IRQ+K ++R DG + FEDNA VIV +G KGS I GPV+KE A+
Sbjct: 71 AIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAE 119
>sp|O26121|RL14_METTH 50S ribosomal protein L14P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl14p PE=3 SV=1
Length = 132
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 85/113 (75%)
Query: 15 RISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRK 74
+++ ALPVGA + C DNTGA+ + +I+V+G KG RL AAG GDM V +VKKG ++R+
Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRR 66
Query: 75 KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
+V+ AV++RQ+K +RR DG+ + FEDNA VIV+ +G +KGS I GPVAKE A
Sbjct: 67 EVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAAD 119
>sp|A8ACD2|RL14_IGNH4 50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1
Length = 137
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 80/116 (68%)
Query: 12 AKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPE 71
++ ++ L VG+ + DN+GAK +I V G GRL R+P AG GDM V TVKKG PE
Sbjct: 9 SRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPE 68
Query: 72 LRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
+R +V+ A+V+RQRKPFRR DG ++ FEDNA VIV+ G +GS I GPVA+E +
Sbjct: 69 MRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVE 124
>sp|Q8U009|RL14_PYRFU 50S ribosomal protein L14P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl14p PE=1 SV=1
Length = 141
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 1 MSKRGRGGSAG-AKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGD 59
M+K+G G + G + R + ALPVGA + ADN+GAK + +I V G RL +AG GD
Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGD 60
Query: 60 MFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 119
M VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA VIV +G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PVAKENAQ 127
PVA+E A+
Sbjct: 121 PVAREAAE 128
>sp|A0RVY3|RL14_CENSY 50S ribosomal protein L14P OS=Cenarchaeum symbiosum (strain A)
GN=rpl14p PE=3 SV=1
Length = 144
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
Query: 4 RGRGGSAGAK-FR--ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDM 60
R RG + G + FR ++ ALPVGA + CADN+GAK L +I VQ K R++RLPAA GD
Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDY 64
Query: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
VKKG ELRK+V AV+IRQ+ P RR +GV + FEDNA V+ +GEMKG+ I GP
Sbjct: 65 VNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGP 124
Query: 121 VAKENAQ 127
VA E ++
Sbjct: 125 VAAEASE 131
>sp|Q9V1U6|RL14_PYRAB 50S ribosomal protein L14P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl14p PE=3 SV=1
Length = 141
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MSKRGRGGSAG-AKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGD 59
M+K+G G + G R + A+PVGA + ADN+GAK + VI V G RL +AG GD
Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 119
M VATVKKG+P++R +V+ AV+IRQRK +RR DG+ I FEDNA VIV +G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PVAKENAQ 127
PVA+E A+
Sbjct: 121 PVAREAAE 128
>sp|Q2NFW7|RL14_METST 50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl14p PE=3 SV=1
Length = 132
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 82/114 (71%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKPELRKK 75
+S +LP+GA + C DNTGA+ + +I+V+G KG RL +AG GDM V +VKKG ++R++
Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRRE 67
Query: 76 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQIC 129
V AVV+RQ+K +RR DG+ + FEDNA VI+ G +KGS I GP+AKE A +
Sbjct: 68 VTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLW 121
>sp|O59427|RL14_PYRHO 50S ribosomal protein L14P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl14p PE=3 SV=2
Length = 141
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 1 MSKRGRGGSAG-AKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGD 59
M+K+G G + G + R + A+P+GA + ADN+GAK + VI V G RL +AG GD
Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 119
M VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA VIV +G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PVAKENAQ 127
PVA+E A+
Sbjct: 121 PVAREAAE 128
>sp|Q12ZU1|RL14_METBU 50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM
6242) GN=rpl14p PE=3 SV=1
Length = 132
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 85/117 (72%)
Query: 11 GAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKGRLNRLPAAGSGDMFVATVKKGKP 70
G + +I AL GA I C DNTGA+ + +I+V+ +G NR+P G GDM V +VKKG P
Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTP 62
Query: 71 ELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKENAQ 127
E+RK+++ AV++RQ+K FRR DG+ + FEDNA VIV++KG KG+ I GPVA+E A+
Sbjct: 63 EMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAE 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,802,628
Number of Sequences: 539616
Number of extensions: 2064064
Number of successful extensions: 6109
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4042
Number of HSP's gapped (non-prelim): 1040
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)