Query psy6164
Match_columns 64
No_of_seqs 108 out of 575
Neff 3.3
Searched_HMMs 13730
Date Fri Aug 16 19:18:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6164.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6164hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vqok1 b.39.1.1 (K:1-132) Rib 99.5 3.6E-15 2.6E-19 98.1 3.9 45 11-55 3-47 (132)
2 d1whia_ b.39.1.1 (A:) Ribosoma 99.2 4.7E-12 3.4E-16 81.8 3.8 31 19-49 1-31 (122)
3 d2j01o1 b.39.1.1 (O:1-122) Rib 99.1 1.2E-11 8.6E-16 79.8 4.0 30 19-48 1-30 (122)
4 d2gyci1 b.39.1.1 (I:2-122) Rib 99.0 7.3E-11 5.3E-15 76.0 3.7 29 20-48 1-29 (121)
5 d1wjqa_ b.34.9.3 (A:) Lethal(3 64.7 4.9 0.00036 23.5 4.1 44 15-58 9-52 (107)
6 d2f23a2 d.26.1.2 (A:78-156) Gr 40.3 15 0.0011 19.8 3.2 27 18-44 53-79 (79)
7 d1oz2a2 b.34.9.3 (A:314-421) L 38.1 15 0.0011 21.0 3.2 42 17-58 29-70 (108)
8 d1oi1a1 b.34.9.3 (A:33-135) Sc 34.2 14 0.001 21.0 2.6 43 17-59 28-70 (103)
9 d1oz2a1 b.34.9.3 (A:204-313) L 32.4 16 0.0012 20.9 2.6 42 18-59 33-74 (110)
10 d1oi1a2 b.34.9.3 (A:140-243) S 30.7 24 0.0018 20.0 3.2 42 18-59 31-72 (104)
11 d1r31a1 d.58.20.1 (A:111-220) 30.3 2.5 0.00018 25.4 -1.4 35 1-36 39-79 (110)
12 d1pyba_ b.40.4.4 (A:) Structur 28.9 16 0.0011 20.9 2.1 25 19-43 12-36 (107)
13 d1oz2a3 b.34.9.3 (A:422-527) L 28.1 32 0.0023 19.5 3.4 44 16-59 24-67 (106)
14 d1wjsa_ b.34.9.3 (A:) Lethal(3 27.1 32 0.0023 20.3 3.4 42 17-58 11-52 (127)
15 d2rcfa1 b.40.15.1 (A:1-82) Car 24.6 25 0.0018 19.7 2.4 50 4-55 14-63 (82)
16 d2cqla1 d.141.1.1 (A:1-87) Rib 21.5 36 0.0027 18.2 2.7 29 17-52 9-37 (87)
17 d1p5vb_ b.2.3.2 (B:) F1 capsul 21.3 36 0.0026 21.1 2.9 36 13-48 3-41 (136)
18 d1wjra_ b.34.9.3 (A:) Scm-like 21.3 40 0.0029 19.7 3.0 41 18-58 10-50 (127)
19 d1pxfa_ b.40.4.4 (A:) Structur 21.2 18 0.0013 20.8 1.3 25 19-43 13-37 (111)
20 d2gcxa1 b.34.1.2 (A:1-75) Ferr 20.6 47 0.0034 17.6 3.0 40 16-55 27-66 (75)
No 1
>d1vqok1 b.39.1.1 (K:1-132) Ribosomal protein L14 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=99.51 E-value=3.6e-15 Score=98.09 Aligned_cols=45 Identities=33% Similarity=0.456 Sum_probs=41.4
Q ss_pred cccceeecccccccEEEEecCcCCceEEEEEEeCccccccchhhh
Q psy6164 11 GAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFE 55 (64)
Q Consensus 11 ~~k~rit~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~ 55 (64)
+-+.++++|||.+|+|+||||||||.++||+|+|++++.+|.|+-
T Consensus 3 ~~~~~~~~~Iq~~s~L~v~DNSGak~v~cI~V~~~~~~k~r~~~a 47 (132)
T d1vqok1 3 ALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRLPKA 47 (132)
T ss_dssp CCSSEECCCEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEE
T ss_pred cccccccccccccCEEEEeeCCCCceEEEEEEecccccccccccc
Confidence 346789999999999999999999999999999999999998764
No 2
>d1whia_ b.39.1.1 (A:) Ribosomal protein L14 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.20 E-value=4.7e-12 Score=81.79 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=28.8
Q ss_pred ccccccEEEEecCcCCceEEEEEEeCccccc
Q psy6164 19 ALPVGAVINCADNTGAKNLFVIAVQGVKDLT 49 (64)
Q Consensus 19 giq~~s~lnvADNSGAK~l~iI~V~g~kgrl 49 (64)
|||.+|+|+|+||||||.++||+|++++++.
T Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~ 31 (122)
T d1whia_ 1 MIQQESRLKVADNSGAREVLVIKVLGGSGRR 31 (122)
T ss_dssp CBCTTCEEEECBSSSEEEEEEEEECSSTTCC
T ss_pred CCccCcEEEEeeCCCCCEEEEEEEECCCCcc
Confidence 8999999999999999999999999987653
No 3
>d2j01o1 b.39.1.1 (O:1-122) Ribosomal protein L14 {Thermus thermophilus [TaxId: 274]}
Probab=99.15 E-value=1.2e-11 Score=79.76 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=28.1
Q ss_pred ccccccEEEEecCcCCceEEEEEEeCcccc
Q psy6164 19 ALPVGAVINCADNTGAKNLFVIAVQGVKDL 48 (64)
Q Consensus 19 giq~~s~lnvADNSGAK~l~iI~V~g~kgr 48 (64)
|||.+|+|+|+||||||.++||+|++.+++
T Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~ 30 (122)
T d2j01o1 1 MIQPQTYLEVADNTGARKIMCIRVLKGSNA 30 (122)
T ss_dssp CCCTTCEEEECSSSSCCEEEEEEECSSTTC
T ss_pred CCccCcEEEEeeCCCCcEEEEEEEeCCCCC
Confidence 899999999999999999999999987665
No 4
>d2gyci1 b.39.1.1 (I:2-122) Ribosomal protein L14 {Escherichia coli [TaxId: 562]}
Probab=99.03 E-value=7.3e-11 Score=75.98 Aligned_cols=29 Identities=31% Similarity=0.499 Sum_probs=26.3
Q ss_pred cccccEEEEecCcCCceEEEEEEeCcccc
Q psy6164 20 LPVGAVINCADNTGAKNLFVIAVQGVKDL 48 (64)
Q Consensus 20 iq~~s~lnvADNSGAK~l~iI~V~g~kgr 48 (64)
||.+|+|+|+||||||.++||+|++...+
T Consensus 1 IQ~~S~l~v~DNSGak~v~cI~vl~~~~~ 29 (121)
T d2gyci1 1 IQEQTMLNVADNSGARRVMCIKVLGGSHR 29 (121)
T ss_dssp CCTTCEEEECSCSSBCEEEEEEETTCCSS
T ss_pred CCcCCeEEEeeCCCccEEEEEEEeCCCCC
Confidence 79999999999999999999999986544
No 5
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.70 E-value=4.9 Score=23.53 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=30.1
Q ss_pred eeecccccccEEEEecCcCCceEEEEEEeCccccccchhhhccc
Q psy6164 15 RISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFD 58 (64)
Q Consensus 15 rit~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~ 58 (64)
+...+.++|..|.+.|-..--.+.+..|....|..=++.|+.+|
T Consensus 9 ~P~~~F~vGmKLEavD~~~~~~i~vAtV~~v~g~~l~v~~DG~~ 52 (107)
T d1wjqa_ 9 KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWN 52 (107)
T ss_dssp CCSSSCCSSCEEEEECTTCTTCEEEEEEEEECSSCEEEECSSSC
T ss_pred CCCccCcCCCEEEEEcCCCCeeEEEEEEEEEECCEEEEEECCCC
Confidence 34567999999999997665555555555555555556666654
No 6
>d2f23a2 d.26.1.2 (A:78-156) GreA transcript cleavage factor, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=40.29 E-value=15 Score=19.75 Aligned_cols=27 Identities=30% Similarity=0.548 Sum_probs=24.0
Q ss_pred cccccccEEEEecCcCCceEEEEEEeC
Q psy6164 18 LALPVGAVINCADNTGAKNLFVIAVQG 44 (64)
Q Consensus 18 ~giq~~s~lnvADNSGAK~l~iI~V~g 44 (64)
+|-.+|..+.+.-..|-+.++|++|+|
T Consensus 53 lGk~~Gd~v~v~~p~g~~~~~Il~I~~ 79 (79)
T d2f23a2 53 LGHRVGDVLSLDTPKGKREFRVVAIHG 79 (79)
T ss_dssp TTCCTTCEEEEEETTEEEEEEEEEEEC
T ss_pred hCCCCCCEEEEEcCCCCEEEEEEEEEC
Confidence 577889999999999999999999986
No 7
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.05 E-value=15 Score=21.00 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=27.4
Q ss_pred ecccccccEEEEecCcCCceEEEEEEeCccccccchhhhccc
Q psy6164 17 SLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFD 58 (64)
Q Consensus 17 t~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~ 58 (64)
..++.+|..|.++|..--..+-+..|....|.+=++.|+.+|
T Consensus 29 ~~~F~~GmkLEavd~~~~~~i~vAtV~~v~g~~~~l~~dg~~ 70 (108)
T d1oz2a2 29 PLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWD 70 (108)
T ss_dssp CTTCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSC
T ss_pred CCCCCCCCEEEEEcCCCCeEEEEEEEEEEECCEEEEEECCCC
Confidence 457999999999997666544444444444444456666654
No 8
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.20 E-value=14 Score=20.97 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=29.6
Q ss_pred ecccccccEEEEecCcCCceEEEEEEeCccccccchhhhcccc
Q psy6164 17 SLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFDR 59 (64)
Q Consensus 17 t~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~~ 59 (64)
..++++|..|.+.|-..-..+.+..|....|.+=++.|+.+|.
T Consensus 28 ~~~f~~GmklEavd~~~~~~~~vAtV~~v~g~~~~l~~dG~~~ 70 (103)
T d1oi1a1 28 VNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDN 70 (103)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCT
T ss_pred CcCcccCCEEEeEcCCCCCeEEEEEEEEeeCCEEEEEECCCCC
Confidence 4578999999999976655555555555555555666666553
No 9
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.38 E-value=16 Score=20.89 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=30.6
Q ss_pred cccccccEEEEecCcCCceEEEEEEeCccccccchhhhcccc
Q psy6164 18 LALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFDR 59 (64)
Q Consensus 18 ~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~~ 59 (64)
..+++|..|.+.|-.--..+.+..|....|.+=++.|+.+|.
T Consensus 33 ~~f~~GmklEavd~~~~~~i~vAtV~~v~g~~l~v~~dg~~~ 74 (110)
T d1oz2a1 33 NGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSE 74 (110)
T ss_dssp CCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCG
T ss_pred CcccCCCEEEEEcCCCCCeEEEEEEEEEECCEEEEEECCCCC
Confidence 478999999999987766666666666666665666666553
No 10
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.74 E-value=24 Score=19.96 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=26.6
Q ss_pred cccccccEEEEecCcCCceEEEEEEeCccccccchhhhcccc
Q psy6164 18 LALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFDR 59 (64)
Q Consensus 18 ~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~~ 59 (64)
.++++|..|.+.|-.--..+.+-.|....|..=++.|+.+|.
T Consensus 31 ~~F~~GmkLEavD~~~~~~i~vAtV~~v~g~~l~v~~dg~~~ 72 (104)
T d1oi1a2 31 NNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSG 72 (104)
T ss_dssp CCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCS
T ss_pred CCCCCCCEEEEECCCCCCeEEEEEEEEEECCEEEEEeCCCCC
Confidence 479999999999966544444444444444444566666553
No 11
>d1r31a1 d.58.20.1 (A:111-220) NAD-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=30.33 E-value=2.5 Score=25.39 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=24.0
Q ss_pred CCCCCCCCCCcccceee------cccccccEEEEecCcCCce
Q psy6164 1 MSKRGRGGSAGAKFRIS------LALPVGAVINCADNTGAKN 36 (64)
Q Consensus 1 m~k~~~~~~~~~k~rit------~giq~~s~lnvADNSGAK~ 36 (64)
|.||| ||......|.- .++++.-.+++.|--||..
T Consensus 39 m~kRG-GG~~di~~r~~~~~~~~~~~~v~l~vdt~DAMGAN~ 79 (110)
T d1r31a1 39 LNSLG-GGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANT 79 (110)
T ss_dssp HHHTT-CEEEEEEEEEECCCTTCCEEEEEEEEECTTBCCHHH
T ss_pred HHhcC-CCeeEEEEEEccCCCcCCEEEEEEEEEhHHhhhhHH
Confidence 34566 55555555542 3788888999999999863
No 12
>d1pyba_ b.40.4.4 (A:) Structure-specific tRNA-binding protein TRBP111 {Aquifex aeolicus [TaxId: 63363]}
Probab=28.87 E-value=16 Score=20.92 Aligned_cols=25 Identities=20% Similarity=0.410 Sum_probs=22.6
Q ss_pred ccccccEEEEecCcCCceEEEEEEe
Q psy6164 19 ALPVGAVINCADNTGAKNLFVIAVQ 43 (64)
Q Consensus 19 giq~~s~lnvADNSGAK~l~iI~V~ 43 (64)
-|.+|..+.|-+.-.|+.++++.|-
T Consensus 12 dirVG~I~~~e~hp~adkL~~~~VD 36 (107)
T d1pyba_ 12 DLRVAKVLSAERVEGSEKLLKLTLS 36 (107)
T ss_dssp CEEEEEEEEEECCSSCSCCEEEEEE
T ss_pred eEEEEEEEEEEeccccCceEEEEee
Confidence 4789999999999999999999984
No 13
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.11 E-value=32 Score=19.52 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=27.8
Q ss_pred eecccccccEEEEecCcCCceEEEEEEeCccccccchhhhcccc
Q psy6164 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFDR 59 (64)
Q Consensus 16 it~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~~ 59 (64)
.+.+.++|..|.+.|-.--..+.+..|....|.+=++.|+-+|.
T Consensus 24 ~~~~F~~GmklEavd~~~~~~i~vAtV~~v~g~~l~v~~DG~~~ 67 (106)
T d1oz2a3 24 PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSH 67 (106)
T ss_dssp CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETTBCG
T ss_pred CccccccCCEEEEEcCCCCceEEEEEEEEEECCEEEEEECCCCC
Confidence 35678899999999944444454545544445555566666653
No 14
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.10 E-value=32 Score=20.29 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=25.9
Q ss_pred ecccccccEEEEecCcCCceEEEEEEeCccccccchhhhccc
Q psy6164 17 SLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFD 58 (64)
Q Consensus 17 t~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~ 58 (64)
..+.++|..|.++|-.---.+.+..|....|.+=++.|+-+|
T Consensus 11 ~~~F~~GmKLEavd~~~~~~i~vAtV~~v~g~~l~v~~DG~~ 52 (127)
T d1wjsa_ 11 KNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYS 52 (127)
T ss_dssp CCSCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSC
T ss_pred CCCCccCCEEEEEcCCCCceEEEEEEEEEECCEEEEEeCCCC
Confidence 457899999999997544444444444444444455566554
No 15
>d2rcfa1 b.40.15.1 (A:1-82) Carboxysome shell protein {Thiobacillus neapolitanus [TaxId: 927]}
Probab=24.59 E-value=25 Score=19.74 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=34.7
Q ss_pred CCCCCCCcccceeecccccccEEEEecCcCCceEEEEEEeCccccccchhhh
Q psy6164 4 RGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFE 55 (64)
Q Consensus 4 ~~~~~~~~~k~rit~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~ 55 (64)
++..+-.+.|+.+-...+.+..+..+|.-||..=+.+-+.. |.--|.+|.
T Consensus 14 ~K~~~L~g~kLlvv~~~~~g~~~VA~D~vGAG~Ge~Vl~~~--Gs~Ar~~~~ 63 (82)
T d2rcfa1 14 NRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVG--SSAAREAAG 63 (82)
T ss_dssp EECTTSCSSCEEEEESSTTSCCEEEEESSCCCTTCEEEEEE--TTHHHHHTT
T ss_pred eEcCCCCCCEEEEEEECCCCcEEEEEeCCCCCCCCEEEEeC--CHHHhhhcC
Confidence 34455567788887778888999999999998765555543 333355554
No 16
>d2cqla1 d.141.1.1 (A:1-87) Ribosomal protein L6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.49 E-value=36 Score=18.23 Aligned_cols=29 Identities=14% Similarity=0.273 Sum_probs=23.9
Q ss_pred ecccccccEEEEecCcCCceEEEEEEeCccccccch
Q psy6164 17 SLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFE 52 (64)
Q Consensus 17 t~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~ 52 (64)
+--||.+-.+.+.++ .|.|+|-+|-|.|.
T Consensus 9 ~I~IP~gV~v~i~~~-------~i~vkGpkG~L~~~ 37 (87)
T d2cqla1 9 TVDIPENVDITLKGR-------TVIVKGPRGTLRRD 37 (87)
T ss_dssp EECCCSSCEEEEETT-------EEEEEETTEEEEEE
T ss_pred cEECCCCCEEEEeCC-------EEEEEcCCcEEEEE
Confidence 455888888888776 79999999999875
No 17
>d1p5vb_ b.2.3.2 (B:) F1 capsule antigen Caf1 {Yersinia pestis [TaxId: 632]}
Probab=21.31 E-value=36 Score=21.13 Aligned_cols=36 Identities=28% Similarity=0.301 Sum_probs=31.8
Q ss_pred cceeecccccccEEEEecCcCCce---EEEEEEeCcccc
Q psy6164 13 KFRISLALPVGAVINCADNTGAKN---LFVIAVQGVKDL 48 (64)
Q Consensus 13 k~rit~giq~~s~lnvADNSGAK~---l~iI~V~g~kgr 48 (64)
..|++.....|+-|.+.||--... +--|..-||++-
T Consensus 3 pArlsaTy~~GAplT~tDN~ksqt~~~iGtitL~GYk~~ 41 (136)
T d1p5vb_ 3 PARITLTYKEGAPITIMDNGNIDTELLVGTLTLGGYKTG 41 (136)
T ss_dssp CEEEEEEEEECCCEECCTTSCCCTTCEEEEEEEECCCTT
T ss_pred ceEEEEEecCCCceEEecCCcccceeeEEEEEeccccCC
Confidence 468899999999999999999888 888999999864
No 18
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.29 E-value=40 Score=19.67 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=30.2
Q ss_pred cccccccEEEEecCcCCceEEEEEEeCccccccchhhhccc
Q psy6164 18 LALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFD 58 (64)
Q Consensus 18 ~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~~~~ 58 (64)
..+++|..|.+.|-.--..+-+-.|....|..=++.|+.+|
T Consensus 10 ~~f~vGmkLEavdp~~~~~i~vAtV~~v~g~~l~v~~DG~~ 50 (127)
T d1wjra_ 10 DLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLE 50 (127)
T ss_dssp HHCCTTCEEEEECSSCSSCEEEEECCCEETTEEEECBTTCS
T ss_pred cccCCCCEEEEEcCCCCCeEEEEEEEEEECCEEEEEEecCC
Confidence 46899999999998776666666666666655557777665
No 19
>d1pxfa_ b.40.4.4 (A:) Structure-specific tRNA-binding protein TRBP111 {Escherichia coli [TaxId: 562]}
Probab=21.19 E-value=18 Score=20.77 Aligned_cols=25 Identities=20% Similarity=0.567 Sum_probs=22.2
Q ss_pred ccccccEEEEecCcCCceEEEEEEe
Q psy6164 19 ALPVGAVINCADNTGAKNLFVIAVQ 43 (64)
Q Consensus 19 giq~~s~lnvADNSGAK~l~iI~V~ 43 (64)
-|.+|..+.|-+.-.|.++++..|-
T Consensus 13 dirVG~I~~~e~hp~adkL~~~~VD 37 (111)
T d1pxfa_ 13 EMRVGKIVEVKRHENADKLYIVQVD 37 (111)
T ss_dssp CEEEEEEEEEECCTTCTTCCEEEEE
T ss_pred eEEEEEEEEEEEcCCCCceEEEEEE
Confidence 4789999999999999999998884
No 20
>d2gcxa1 b.34.1.2 (A:1-75) Ferrous iron transport protein A, FeoA {Klebsiella pneumoniae [TaxId: 573]}
Probab=20.56 E-value=47 Score=17.64 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=32.7
Q ss_pred eecccccccEEEEecCcCCceEEEEEEeCccccccchhhh
Q psy6164 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFE 55 (64)
Q Consensus 16 it~giq~~s~lnvADNSGAK~l~iI~V~g~kgrlnr~~~~ 55 (64)
..+|+-+|+.+.|.-.+.-.--.+|.|.|..=.+++.+-+
T Consensus 27 ~~mGl~pG~~V~v~~~ap~g~P~~i~v~~~~iaLr~~~A~ 66 (75)
T d2gcxa1 27 LSLGMLPGSSFHVVRVAPLGDPVHIETRRVSLVLRKKDLA 66 (75)
T ss_dssp TTTTCCSSEEEEECCCCSSCCEEEEEETTEEEEEETTTTT
T ss_pred HHcCCCCCCEEEEEEECCCCCCEEEEECCEEEEECHHHhC
Confidence 3899999999999999877777888998887777776543
Done!