Your job contains 1 sequence.
>psy6164
MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVKDLTTFEEFERFDRG
NFNI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6164
(64 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3T057 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|F2Z4P3 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|J9P897 - symbol:J9P897 "Uncharacterized protein... 209 5.3e-17 1
UNIPROTKB|Q9XSU3 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|B9ZVP7 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|J3KT29 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|P62829 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
UNIPROTKB|P62831 - symbol:RPL23 "60S ribosomal protein L2... 209 5.3e-17 1
MGI|MGI:1929455 - symbol:Rpl23 "ribosomal protein L23" sp... 209 5.3e-17 1
RGD|62067 - symbol:Rpl23 "ribosomal protein L23" species:... 209 5.3e-17 1
ZFIN|ZDB-GENE-030131-8756 - symbol:rpl23 "ribosomal prote... 209 5.3e-17 1
FB|FBgn0010078 - symbol:RpL23 "Ribosomal protein L23" spe... 202 2.9e-16 1
WB|WBGene00004435 - symbol:rpl-23 species:6239 "Caenorhab... 202 2.9e-16 1
UNIPROTKB|E1BY89 - symbol:RPL23 "Uncharacterized protein"... 191 4.2e-15 1
TAIR|locus:2018309 - symbol:AT1G04480 species:3702 "Arabi... 186 1.4e-14 1
TAIR|locus:2051119 - symbol:AT2G33370 species:3702 "Arabi... 186 1.4e-14 1
TAIR|locus:2100915 - symbol:emb2171 "embryo defective 217... 186 1.4e-14 1
UNIPROTKB|C9JD32 - symbol:RPL23 "60S ribosomal protein L2... 184 2.3e-14 1
UNIPROTKB|G3MY15 - symbol:G3MY15 "Uncharacterized protein... 164 3.1e-12 1
RGD|2318559 - symbol:LOC100362226 "ribosomal protein L23-... 148 1.5e-10 1
SGD|S000000183 - symbol:RPL23A "Ribosomal 60S subunit pro... 148 1.5e-10 1
SGD|S000000919 - symbol:RPL23B "Ribosomal 60S subunit pro... 148 1.5e-10 1
POMBASE|SPAC3G9.03 - symbol:rpl2301 "60S ribosomal protei... 144 4.1e-10 1
POMBASE|SPCC1322.11 - symbol:rpl2302 "60S ribosomal prote... 144 4.1e-10 1
ASPGD|ASPL0000077643 - symbol:AN4494 species:162425 "Emer... 142 6.6e-10 1
DICTYBASE|DDB_G0290315 - symbol:rpl23 "S60 ribosomal prot... 138 1.8e-09 1
UNIPROTKB|F1M637 - symbol:F1M637 "Uncharacterized protein... 103 9.0e-06 1
>UNIPROTKB|Q3T057 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:BC102556
EMBL:BC148014 IPI:IPI00695041 RefSeq:NP_001030186.1
UniGene:Bt.48897 ProteinModelPortal:Q3T057 SMR:Q3T057 STRING:Q3T057
PRIDE:Q3T057 Ensembl:ENSBTAT00000004190 GeneID:504876
KEGG:bta:504876 CTD:9349 HOVERGEN:HBG000282 InParanoid:Q3T057
OrthoDB:EOG4CRM1G NextBio:20866877 Uniprot:Q3T057
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|F2Z4P3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AAEX03006484
ProteinModelPortal:F2Z4P3 SMR:F2Z4P3 PRIDE:F2Z4P3
Ensembl:ENSCAFT00000026221 Uniprot:F2Z4P3
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|J9P897 [details] [associations]
symbol:J9P897 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 GeneTree:ENSGT00390000004690
EMBL:AAEX03005517 Ensembl:ENSCAFT00000016692 OMA:YAKIGST
Uniprot:J9P897
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|Q9XSU3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:NOG291117 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 HOGENOM:HOG000183703 KO:K02894 CTD:9349
HOVERGEN:HBG000282 EMBL:AJ388521 RefSeq:NP_001003100.1
UniGene:Cfa.3547 PRIDE:Q9XSU3 GeneID:403683 KEGG:cfa:403683
NextBio:20817187 Uniprot:Q9XSU3
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|B9ZVP7 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193 ChiTaRS:RpL23
HGNC:HGNC:10316 EMBL:AC110749 IPI:IPI00794091
ProteinModelPortal:B9ZVP7 SMR:B9ZVP7 STRING:B9ZVP7 PRIDE:B9ZVP7
Ensembl:ENST00000394333 ArrayExpress:B9ZVP7 Bgee:B9ZVP7
Uniprot:B9ZVP7
Length = 114
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|J3KT29 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 ChiTaRS:RpL23 HGNC:HGNC:10316
EMBL:AC110749 ProteinModelPortal:J3KT29 Ensembl:ENST00000577407
Uniprot:J3KT29
Length = 122
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|P62829 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005840
"ribosome" evidence=NAS] [GO:0006610 "ribosomal protein import into
nucleus" evidence=NAS] [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 EMBL:X52839 Reactome:REACT_116125
GO:GO:0005730 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 GO:GO:0006610 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
OMA:QRKEYRR CTD:9349 HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G
ChiTaRS:RpL23 EMBL:X55954 EMBL:AB061827 EMBL:BC010114 EMBL:BC062716
EMBL:BC104651 EMBL:BC106061 IPI:IPI00010153 PIR:S18815
RefSeq:NP_000969.1 UniGene:Hs.406300 ProteinModelPortal:P62829
SMR:P62829 IntAct:P62829 MINT:MINT-5001181 STRING:P62829
PhosphoSite:P62829 DMDM:51338639 SWISS-2DPAGE:P62829 PaxDb:P62829
PRIDE:P62829 Ensembl:ENST00000394332 Ensembl:ENST00000479035
GeneID:9349 KEGG:hsa:9349 UCSC:uc002hqx.1 GeneCards:GC17M037005
HGNC:HGNC:10316 HPA:HPA003373 MIM:603662 neXtProt:NX_P62829
PharmGKB:PA34690 InParanoid:P62829 PhylomeDB:P62829 GenomeRNAi:9349
NextBio:35009 ArrayExpress:P62829 Bgee:P62829 CleanEx:HS_RPL23
Genevestigator:P62829 GermOnline:ENSG00000125691 Uniprot:P62829
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|P62831 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 EMBL:F14853 EMBL:DQ629166 RefSeq:NP_001123427.1
UniGene:Ssc.53748 ProteinModelPortal:P62831 SMR:P62831 PRIDE:P62831
Ensembl:ENSSSCT00000030349 GeneID:414398 KEGG:ssc:414398
Uniprot:P62831
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>MGI|MGI:1929455 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0022626
"cytosolic ribosome" evidence=ISA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 MGI:MGI:1929455 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 GO:GO:0022626 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G ChiTaRS:RpL23 EMBL:AF158022
EMBL:AF287271 EMBL:AK002579 EMBL:AK010680 EMBL:AK012694
EMBL:AK018730 EMBL:AK150671 EMBL:AK168133 EMBL:BC025918
EMBL:BC081448 IPI:IPI00139780 RefSeq:NP_075029.1
RefSeq:XP_003688806.1 RefSeq:XP_003689266.1 UniGene:Mm.140380
ProteinModelPortal:P62830 SMR:P62830 IntAct:P62830 STRING:P62830
PaxDb:P62830 PRIDE:P62830 Ensembl:ENSMUST00000103146
GeneID:100044627 GeneID:100862455 GeneID:65019 KEGG:mmu:100044627
KEGG:mmu:100862455 KEGG:mmu:65019 InParanoid:P62830 NextBio:320251
Bgee:P62830 CleanEx:MM_RPL23 Genevestigator:P62830
GermOnline:ENSMUSG00000071415 Uniprot:P62830
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>RGD|62067 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 RGD:62067
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:X58200 EMBL:BC058500
IPI:IPI00207980 PIR:JH0418 RefSeq:NP_001007600.1 UniGene:Rn.103172
ProteinModelPortal:P62832 SMR:P62832 IntAct:P62832 STRING:P62832
PhosphoSite:P62832 PRIDE:P62832 Ensembl:ENSRNOT00000005471
GeneID:29282 KEGG:rno:29282 UCSC:RGD:62067 InParanoid:P62832
NextBio:608657 Genevestigator:P62832 GermOnline:ENSRNOG00000004107
Uniprot:P62832
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>ZFIN|ZDB-GENE-030131-8756 [details] [associations]
symbol:rpl23 "ribosomal protein L23" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
ZFIN:ZDB-GENE-030131-8756 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:BC049038 EMBL:BC059509
IPI:IPI00481155 RefSeq:NP_957026.1 UniGene:Dr.30814
ProteinModelPortal:Q6PC14 STRING:Q6PC14 PRIDE:Q6PC14
Ensembl:ENSDART00000075495 GeneID:336812 KEGG:dre:336812
InParanoid:Q6PC14 NextBio:20811915 Bgee:Q6PC14 Uniprot:Q6PC14
Length = 140
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 46
>FB|FBgn0010078 [details] [associations]
symbol:RpL23 "Ribosomal protein L23" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:AE013599
GO:GO:0022008 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
EMBL:M85295 EMBL:BT053700 PIR:JC1253 RefSeq:NP_523813.1
UniGene:Dm.6664 ProteinModelPortal:P48159 SMR:P48159 DIP:DIP-21429N
IntAct:P48159 MINT:MINT-943050 STRING:P48159 PaxDb:P48159
EnsemblMetazoa:FBtr0071897 GeneID:37628 KEGG:dme:Dmel_CG3661
FlyBase:FBgn0010078 InParanoid:P48159 OrthoDB:EOG437PX9
PhylomeDB:P48159 ChiTaRS:RpL23 GenomeRNAi:37628 NextBio:804633
Bgee:P48159 GermOnline:CG3661 Uniprot:P48159
Length = 140
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 38/46 (82%), Positives = 43/46 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGG+AG KFRISL LPVGAV+NCADNTGAKNL+VIAV G++
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIR 46
>WB|WBGene00004435 [details] [associations]
symbol:rpl-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
InterPro:IPR001610 GO:GO:0009792 GO:GO:0040007 GO:GO:0007165
GO:GO:0002119 GO:GO:0006355 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 SMART:SM00086
EMBL:FO080138 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
HOGENOM:HOG000183703 KO:K02894 GeneTree:ENSGT00390000004690
OMA:QRKEYRR PIR:T15337 RefSeq:NP_498231.1 ProteinModelPortal:P48158
SMR:P48158 DIP:DIP-27299N IntAct:P48158 MINT:MINT-213738
STRING:P48158 PaxDb:P48158 EnsemblMetazoa:B0336.10.1
EnsemblMetazoa:B0336.10.2 EnsemblMetazoa:B0336.10.3 GeneID:175796
KEGG:cel:CELE_B0336.10 UCSC:B0336.10.2 CTD:175796 WormBase:B0336.10
InParanoid:P48158 NextBio:889716 Uniprot:P48158
Length = 140
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 38/46 (82%), Positives = 44/46 (95%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGG++GAKFRISL LPVGAV+NCADNTGAKNLFVI+V G++
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIR 46
>UNIPROTKB|E1BY89 [details] [associations]
symbol:RPL23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AADN02022227
EMBL:AADN02022228 IPI:IPI00598304 Ensembl:ENSGALT00000002496
NextBio:20822975 Uniprot:E1BY89
Length = 140
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 37/46 (80%), Positives = 43/46 (93%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGGS+GAKFRISL LPVGAVI ADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVIKGADNTGAKNLYIISVKGIK 46
>TAIR|locus:2018309 [details] [associations]
symbol:AT1G04480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 33/46 (71%), Positives = 42/46 (91%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGG++G KFR+SL LPV A +NCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIK 46
>TAIR|locus:2051119 [details] [associations]
symbol:AT2G33370 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
EMBL:CP002684 EMBL:CP002686 EMBL:CP002685 GO:GO:0005730
GO:GO:0006412 EMBL:AC000104 GO:GO:0003735 UniGene:At.20792
EMBL:AC002332 EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894 EMBL:AY042843
EMBL:AY054508 EMBL:AY072481 EMBL:AY081677 EMBL:AY086853
EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371 IPI:IPI00524788
PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1 RefSeq:NP_563707.1
UniGene:At.11034 UniGene:At.22254 UniGene:At.28146
ProteinModelPortal:P49690 SMR:P49690 STRING:P49690 PaxDb:P49690
PRIDE:P49690 EnsemblPlants:AT1G04480.1 EnsemblPlants:AT2G33370.1
EnsemblPlants:AT3G04400.1 GeneID:817900 GeneID:819595 GeneID:839511
KEGG:ath:AT1G04480 KEGG:ath:AT2G33370 KEGG:ath:AT3G04400
TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400 InParanoid:P49690
OMA:QRKEYRR PhylomeDB:P49690 ProtClustDB:CLSN2683488
Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 33/46 (71%), Positives = 42/46 (91%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGG++G KFR+SL LPV A +NCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIK 46
>TAIR|locus:2100915 [details] [associations]
symbol:emb2171 "embryo defective 2171" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 33/46 (71%), Positives = 42/46 (91%)
Query: 1 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
MSKRGRGG++G KFR+SL LPV A +NCADNTGAKNL++I+V+G+K
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIK 46
>UNIPROTKB|C9JD32 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005737
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20
PANTHER:PTHR11761 SUPFAM:SSF50193 ChiTaRS:RpL23 HGNC:HGNC:10316
EMBL:AC110749 IPI:IPI00795751 ProteinModelPortal:C9JD32 SMR:C9JD32
STRING:C9JD32 PRIDE:C9JD32 Ensembl:ENST00000378096
ArrayExpress:C9JD32 Bgee:C9JD32 Uniprot:C9JD32
Length = 91
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/41 (82%), Positives = 40/41 (97%)
Query: 6 RGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
RGGS+GAKFRISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 10 RGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIK 50
>UNIPROTKB|G3MY15 [details] [associations]
symbol:G3MY15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193
GeneTree:ENSGT00390000004690 EMBL:DAAA02008675
Ensembl:ENSBTAT00000064605 OMA:PIAKECA Uniprot:G3MY15
Length = 132
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 30/38 (78%), Positives = 37/38 (97%)
Query: 9 SAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
S+GAK+RISL LPVGAVINCADNTGAKNL++I+V+G+K
Sbjct: 1 SSGAKYRISLGLPVGAVINCADNTGAKNLYIISVKGIK 38
>RGD|2318559 [details] [associations]
symbol:LOC100362226 "ribosomal protein L23-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 RGD:2318559 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 GeneTree:ENSGT00390000004690 IPI:IPI00388644
Ensembl:ENSRNOT00000032589 Uniprot:F1LWL3
Length = 140
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 3 KRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
K+ RGGS+GAKFRISL L VGAVIN AD+TG KN+++I+V+ +K
Sbjct: 3 KQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIK 46
>SGD|S000000183 [details] [associations]
symbol:RPL23A "Ribosomal 60S subunit protein L23A"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000183 EMBL:BK006936 GO:GO:0003735 GO:GO:0002181
EMBL:X79489 PDB:4B6A PDBsum:4B6A PDB:3J16 PDBsum:3J16 GO:GO:0022625
PDB:2X7N PDBsum:2X7N Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I EMBL:X01694 EMBL:Z35848 PIR:A02792 RefSeq:NP_009466.1
RefSeq:NP_011042.3 RefSeq:NP_011047.3 ProteinModelPortal:P0CX41
SMR:P0CX41 EnsemblFungi:YBL087C EnsemblFungi:YER117W GeneID:852191
GeneID:856853 GeneID:856858 KEGG:sce:YBL087C KEGG:sce:YER117W
KEGG:sce:YER121W CYGD:YBL087c HOGENOM:HOG000183703 KO:K02894
EvolutionaryTrace:P0CX41 NextBio:970670 ArrayExpress:P0CX41
GermOnline:YBL087C Uniprot:P0CX41
Length = 137
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 8 GSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQG 44
G+ G KFRISL LPVGA++NCADN+GA+NL++IAV+G
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKG 41
>SGD|S000000919 [details] [associations]
symbol:RPL23B "Ribosomal 60S subunit protein L23B"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000919 EMBL:BK006939 GO:GO:0003735 GO:GO:0002181
EMBL:U18916 EMBL:U15653 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 PIR:A02792 RefSeq:NP_009466.1 RefSeq:NP_011042.3
RefSeq:NP_011047.3 EnsemblFungi:YBL087C EnsemblFungi:YER117W
GeneID:852191 GeneID:856853 GeneID:856858 KEGG:sce:YBL087C
KEGG:sce:YER117W KEGG:sce:YER121W KO:K02894 NextBio:970670
ProteinModelPortal:P0CX42 SMR:P0CX42 CYGD:YER117w
GeneTree:ENSGT00390000004690 ArrayExpress:P0CX42 GermOnline:YER117W
Uniprot:P0CX42
Length = 137
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 8 GSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQG 44
G+ G KFRISL LPVGA++NCADN+GA+NL++IAV+G
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKG 41
>POMBASE|SPAC3G9.03 [details] [associations]
symbol:rpl2301 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 PomBase:SPCC1322.11 PomBase:SPAC3G9.03 GO:GO:0005739
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 24/41 (58%), Positives = 36/41 (87%)
Query: 4 RGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQG 44
RGRG ++G K+R++L LPV A++NCADN+GAKNL++++V G
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFG 43
>POMBASE|SPCC1322.11 [details] [associations]
symbol:rpl2302 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 PomBase:SPCC1322.11
PomBase:SPAC3G9.03 GO:GO:0005739 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 24/41 (58%), Positives = 36/41 (87%)
Query: 4 RGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQG 44
RGRG ++G K+R++L LPV A++NCADN+GAKNL++++V G
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFG 43
>ASPGD|ASPL0000077643 [details] [associations]
symbol:AN4494 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BN001303 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
HOGENOM:HOG000183703 OMA:QRKEYRR EnsemblFungi:CADANIAT00005951
Uniprot:C8V8E0
Length = 140
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 2 SKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGV 45
SKRGRG AG K +++L LP GAV+NC DN+GA+NL++I+V+G+
Sbjct: 3 SKRGRG-VAGNKLKMTLGLPCGAVLNCCDNSGARNLYIISVKGI 45
>DICTYBASE|DDB_G0290315 [details] [associations]
symbol:rpl23 "S60 ribosomal protein L23"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 dictyBase:DDB_G0290315
GO:GO:0006412 GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000162 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 KO:K02894
OMA:QRKEYRR RefSeq:XP_635797.1 HSSP:P22450
ProteinModelPortal:Q54G86 SMR:Q54G86 STRING:Q54G86
EnsemblProtists:DDB0230148 GeneID:8627602 KEGG:ddi:DDB_G0290315
ProtClustDB:PTZ00054 Uniprot:Q54G86
Length = 136
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 25/38 (65%), Positives = 34/38 (89%)
Query: 9 SAGAKFRISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
+ G+ +R+SL LPVGAV+N ADN+GAKNL+VIAV+G+K
Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIK 43
>UNIPROTKB|F1M637 [details] [associations]
symbol:F1M637 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193
IPI:IPI00393748 Ensembl:ENSRNOT00000031239 Uniprot:F1M637
Length = 129
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 16 ISLALPVGAVINCADNTGAKNLFVIAVQGVK 46
I L LP+ AVIN ADNTGAK+L++I+V G+K
Sbjct: 12 IFLGLPLRAVINSADNTGAKDLYIISVNGIK 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 64 64 0.00091 102 3 11 22 0.38 28
29 0.44 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 395 (42 KB)
Total size of DFA: 67 KB (2061 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 6.50u 0.08s 6.58t Elapsed: 00:00:08
Total cpu time: 6.50u 0.08s 6.58t Elapsed: 00:00:10
Start: Thu Aug 15 14:27:27 2013 End: Thu Aug 15 14:27:37 2013