Query psy6172
Match_columns 130
No_of_seqs 141 out of 1024
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 19:33:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h67_A Calponin alpha; cytoske 100.0 1.6E-37 5.6E-42 211.7 5.0 106 3-123 2-107 (108)
2 1ujo_A Transgelin; CH domain, 100.0 2.2E-36 7.6E-41 215.5 9.9 115 2-124 7-124 (144)
3 1wym_A Transgelin-2; CH domain 100.0 7E-36 2.4E-40 215.2 10.7 114 1-123 14-130 (155)
4 1wyp_A Calponin 1; CH domain, 100.0 4.7E-36 1.6E-40 212.0 8.3 108 2-124 15-122 (136)
5 1wyr_A RHO guanine nucleotide 100.0 6.6E-36 2.3E-40 207.5 8.3 112 2-122 4-115 (121)
6 1wyn_A Calponin-2; CH domain, 100.0 2E-35 6.7E-40 211.0 8.1 106 2-122 15-120 (146)
7 2l3g_A RHO guanine nucleotide 100.0 5.8E-35 2E-39 204.0 10.0 109 3-121 11-121 (126)
8 3ky9_A Proto-oncogene VAV; cal 100.0 5.4E-35 1.9E-39 245.8 11.6 126 3-130 4-130 (587)
9 1p2x_A RNG2 protein, RAS GTPas 100.0 7.7E-35 2.6E-39 210.6 10.4 106 5-122 12-117 (159)
10 2rr8_A Iqgap1 protein; F-actin 100.0 1.6E-34 5.4E-39 214.2 8.7 106 7-122 28-140 (190)
11 3i6x_A P195, RAS GTPase-activa 100.0 3.6E-34 1.2E-38 212.7 9.7 105 8-121 51-161 (193)
12 1p5s_A RAS GTPase-activating-l 100.0 4.6E-34 1.6E-38 213.6 9.9 107 4-122 55-161 (203)
13 2yrn_A Neuron navigator 2 isof 99.8 1.1E-20 3.8E-25 131.8 7.5 112 3-126 17-128 (129)
14 1pxy_A Fimbrin-like protein; c 99.8 1.2E-18 4.2E-23 144.6 8.8 103 3-107 6-109 (506)
15 1aoa_A T-fimbrin; actin-bindin 99.7 1.7E-17 5.9E-22 128.3 11.4 113 2-118 22-135 (275)
16 1rt8_A Fimbrin; filamentous ac 99.7 3E-16 1E-20 130.4 11.2 113 2-117 10-127 (513)
17 2qjz_A Microtubule-associated 99.6 6.4E-15 2.2E-19 102.0 7.6 84 6-105 7-90 (123)
18 1wku_A Alpha-actinin 3; calpon 99.6 2.7E-15 9.1E-20 115.0 6.3 101 3-118 26-126 (254)
19 2wa7_A Filamin-B; disease muta 99.6 4.5E-15 1.5E-19 113.1 7.2 103 3-118 19-121 (245)
20 1wyo_A Protein EB3, microtubul 99.6 5.2E-15 1.8E-19 106.3 6.7 87 3-105 21-107 (159)
21 1rt8_A Fimbrin; filamentous ac 99.5 5.7E-14 1.9E-18 116.8 9.4 102 4-118 285-390 (513)
22 1sh5_A Plectin 1, PLTN, PCN; a 99.5 1.1E-13 3.7E-18 105.2 7.3 105 3-118 11-115 (245)
23 1dxx_A Dystrophin; structural 99.4 9.3E-14 3.2E-18 105.8 6.2 100 3-117 15-114 (246)
24 2vzc_A Alpha-parvin; membrane, 99.4 5.9E-13 2E-17 92.9 7.3 100 6-117 24-123 (131)
25 3f7p_A Plectin-1; plakin, hemi 99.4 4.4E-13 1.5E-17 104.9 6.5 99 4-118 73-171 (296)
26 3hoc_A Filamin-A; calponin hom 99.3 2.6E-12 8.9E-17 99.4 6.9 100 5-117 48-147 (272)
27 1pxy_A Fimbrin-like protein; c 99.3 7.7E-12 2.6E-16 103.7 9.0 102 4-118 276-377 (506)
28 1sjj_A Actinin; 3-helix bundle 99.2 1.5E-11 5.2E-16 106.4 5.9 102 3-119 7-108 (863)
29 4b7l_A Filamin-B; structural p 99.1 1.6E-10 5.6E-15 92.0 7.0 101 6-119 19-119 (347)
30 1wjo_A T-plastin; CH domain, a 98.9 1.3E-09 4.5E-14 75.3 4.8 104 6-119 9-115 (124)
31 1wyl_A NEDD9 interacting prote 98.6 1E-07 3.4E-12 64.9 6.1 97 6-117 9-105 (116)
32 2d89_A EHBP1 protein; all alph 98.6 2.1E-07 7E-12 63.6 7.1 97 6-118 11-109 (119)
33 2d87_A Smoothelin splice isofo 98.6 2.4E-07 8.1E-12 64.2 7.5 98 5-117 8-107 (128)
34 1bkr_A Spectrin beta chain; fi 98.5 3.7E-07 1.3E-11 61.4 7.5 98 5-117 4-102 (109)
35 1wyq_A Spectrin beta chain, br 98.5 5.5E-07 1.9E-11 62.2 7.2 97 6-117 9-106 (127)
36 1bhd_A Utrophin; calponin homo 98.4 4.2E-07 1.4E-11 62.0 5.9 99 4-117 8-107 (118)
37 2d88_A Protein mical-3; all al 98.4 6.5E-07 2.2E-11 61.3 6.0 96 7-117 12-109 (121)
38 1wku_A Alpha-actinin 3; calpon 98.3 1.5E-06 5E-11 66.3 7.4 97 6-117 142-240 (254)
39 2r8u_A Microtubule-associated 98.2 2.4E-06 8.1E-11 65.8 6.4 83 7-105 18-100 (268)
40 1sh5_A Plectin 1, PLTN, PCN; a 98.1 4.2E-06 1.4E-10 63.2 6.6 97 6-117 135-232 (245)
41 2wa7_A Filamin-B; disease muta 98.0 9.4E-06 3.2E-10 61.4 6.6 92 5-114 144-237 (245)
42 4abo_I MAL3, microtubule integ 98.0 8.5E-06 2.9E-10 57.4 5.5 87 2-105 4-90 (145)
43 1dxx_A Dystrophin; structural 98.0 8.2E-06 2.8E-10 61.7 5.7 100 5-118 136-236 (246)
44 3f7p_A Plectin-1; plakin, hemi 97.9 2.1E-05 7.1E-10 61.4 6.2 97 6-117 191-288 (296)
45 3hoc_A Filamin-A; calponin hom 97.9 2.6E-05 9.1E-10 60.1 6.5 88 5-110 171-260 (272)
46 4b7l_A Filamin-B; structural p 97.8 3.4E-05 1.2E-09 61.2 6.7 92 5-114 141-234 (347)
47 1aoa_A T-fimbrin; actin-bindin 97.8 3.4E-05 1.2E-09 59.2 5.5 94 6-111 170-267 (275)
48 2qjx_A Protein BIM1; calponin 97.7 6.1E-05 2.1E-09 52.0 6.0 83 6-105 12-94 (127)
49 1sjj_A Actinin; 3-helix bundle 97.6 4.6E-05 1.6E-09 65.9 4.9 96 8-118 125-222 (863)
50 2ee7_A Sperm flagellar protein 97.2 0.0014 4.6E-08 45.2 6.8 98 1-115 12-115 (127)
51 1wix_A HOOK homolog 1, RSGI RU 95.0 0.041 1.4E-06 39.1 5.3 73 3-86 8-83 (164)
52 4dot_A Group XVI phospholipase 53.5 6.9 0.00023 26.9 2.0 26 73-102 109-134 (140)
53 1v85_A Similar to ring finger 38.9 26 0.00088 21.7 2.9 38 6-51 22-59 (91)
54 3zyl_A Phosphatidylinositol-bi 38.5 19 0.00066 27.1 2.6 23 71-94 248-270 (271)
55 1kw4_A Polyhomeotic; SAM domai 32.7 36 0.0012 21.1 2.8 36 7-51 20-55 (89)
56 4dpz_X HRAS-like suppressor 2; 29.9 29 0.00099 23.5 2.2 21 73-95 109-129 (137)
57 3ro3_B Minsc, peptide of prote 26.8 31 0.0011 16.0 1.3 9 8-16 9-17 (22)
58 2lkt_A Retinoic acid receptor 24.2 41 0.0014 21.8 2.1 16 73-90 109-124 (125)
59 1sv0_C Modulator of the activi 24.0 33 0.0011 21.0 1.4 38 6-50 16-54 (82)
60 3bs5_B Connector enhancer of k 24.0 45 0.0015 19.7 2.1 35 7-50 10-45 (80)
61 3bs7_A Protein aveugle; sterIl 24.0 46 0.0016 19.6 2.1 35 7-50 9-44 (78)
62 2d8c_A Phosphatidylcholine:cer 23.1 31 0.0011 21.9 1.2 32 7-50 23-54 (97)
63 3omt_A Uncharacterized protein 21.4 58 0.002 18.2 2.2 23 76-99 49-71 (73)
64 3bq7_A Diacylglycerol kinase d 21.3 57 0.0019 19.5 2.1 33 7-49 13-45 (81)
65 2wcj_A General odorant-binding 20.8 81 0.0028 20.9 3.1 18 76-93 11-28 (141)
No 1
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=100.00 E-value=1.6e-37 Score=211.69 Aligned_cols=106 Identities=26% Similarity=0.478 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
++.|+|+++||+++++.+.+ ++|+++||||++||+|+|++.||+|+ +|+.++ .+|+++|||+.||+
T Consensus 2 ~~~e~e~~~WIe~~l~~~~~----------~~l~~~L~dGvvLCkL~N~l~P~~v~--ki~~~~--~~f~~~eNI~~Fl~ 67 (108)
T 1h67_A 2 PQTERQLRVWIEGATGRRIG----------DNFMDGLKDGVILCELINKLQPGSVQ--KVNDPV--QNWHKLENIGNFLR 67 (108)
T ss_dssp CCSSHHHHHHHHHHHSCCCC----------SCHHHHHHHCSHHHHHHHHHSTTSST--TCCCTT--SSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCc----------HHHHHHHccHHHHHHHHHHhCCCCcc--cccccc--cchHHHHHHHHHHH
Confidence 46789999999999987642 48999999999999999999999997 788553 37999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhh
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKV 123 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~ 123 (130)
+|++ +|+|+.++|++.||||++|+.+|+.||++|++.+..
T Consensus 68 a~~~-~Gv~~~~lF~~~DL~e~kn~~~V~~~l~aL~~~a~~ 107 (108)
T 1h67_A 68 AIKH-YGVKPHDIFEANDLFENTNHTQVQSTLIALASQAKT 107 (108)
T ss_dssp HHHH-HTSCGGGSCCHHHHHHTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCCcccccChhHHHhCCChHHHHHHHHHHHHHHcc
Confidence 9995 999999999999999999999999999999998753
No 2
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=100.00 E-value=2.2e-36 Score=215.49 Aligned_cols=115 Identities=17% Similarity=0.316 Sum_probs=100.6
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcC---CCCCcccccCCcccchhhhhhhHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDP---ACIDMREVNQKPQLAQFLCLRNIR 78 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P---~~v~~~~i~~~~~~~~f~~~eNI~ 78 (130)
|+++|+|+++||+++++.+.+. ++++.++|.++|||||+||+|+|++.| ++|+ .+|+.+ . .+|+++|||+
T Consensus 7 ~~~~e~e~~~WIe~~l~~~l~~----~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~-~kin~~-~-~~f~~~eNI~ 79 (144)
T 1ujo_A 7 GEELEERLVEWIVVQCGPDVGR----PDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVK-VPENPP-S-MVFKQMEQVA 79 (144)
T ss_dssp CCHHHHHHHHHHHHHHCTTTCC----CCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSC-CCSSCC-C-SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCC----cCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcc-eeecCC-C-chhHHHHHHH
Confidence 6799999999999999877541 234557999999999999999999999 7875 267744 3 3799999999
Q ss_pred HHHHHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhhh
Q psy6172 79 IFIQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKVQ 124 (130)
Q Consensus 79 ~Fl~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~~ 124 (130)
+||+||++ +|||+.++|++.||||++|+.+|+.||++|++.+...
T Consensus 80 ~FL~ac~~-~Gv~~~~lF~t~DL~e~kn~~~V~~cL~aL~~~a~~~ 124 (144)
T 1ujo_A 80 QFLKAAED-YGVIKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVTK 124 (144)
T ss_dssp HHHHHHHH-HTCCSSSCCCHHHHHTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCcCccccCChhHHHhcCCHHHHHHHHHHHHHHHHHc
Confidence 99999995 9999999999999999999999999999999987554
No 3
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=7e-36 Score=215.23 Aligned_cols=114 Identities=23% Similarity=0.369 Sum_probs=101.1
Q ss_pred CChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcC---CCCCcccccCCcccchhhhhhhH
Q psy6172 1 MSDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDP---ACIDMREVNQKPQLAQFLCLRNI 77 (130)
Q Consensus 1 ~~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P---~~v~~~~i~~~~~~~~f~~~eNI 77 (130)
+++++++|+++||+++++.+.+. ++++.++|+++|+|||+||+|+|++.| |+|+ +|+.+ .+ +|+++|||
T Consensus 14 y~~~~e~e~~~WIe~~l~~~l~~----~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~--kIn~~-~~-~F~~~eNI 85 (155)
T 1wym_A 14 YDADLEQILIQWITTQCRKDVGR----PQPGRENFQNWLKDGTVLCELINALYPEGQAPVK--KIQAS-TM-AFKQMEQI 85 (155)
T ss_dssp CCHHHHHHHHHHHHHHSSSCCCC----CCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCC--CCCCC-CC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCC----CcccHHHHHHHHcchHHHHHHHHHhccccCCCcC--cccCC-Cc-cccHHHHH
Confidence 46889999999999999877542 134567999999999999999999999 9997 88854 33 79999999
Q ss_pred HHHHHHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhh
Q psy6172 78 RIFIQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKV 123 (130)
Q Consensus 78 ~~Fl~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~ 123 (130)
+.||+||++ +|||+.++|++.||||++|+.+|+.||++|++.+..
T Consensus 86 ~~FL~ac~~-~Gv~~~~lF~t~DL~e~kn~~~Vi~cL~aL~~~a~~ 130 (155)
T 1wym_A 86 SQFLQAAER-YGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVA 130 (155)
T ss_dssp HHHHHHHHH-HTCCTTTCCCHHHHHTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH-cCCCccccCChHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999995 999999999999999999999999999999998643
No 4
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=212.01 Aligned_cols=108 Identities=24% Similarity=0.471 Sum_probs=97.9
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
++++++++++||+++++.+.+ .+|++.|+||++||+|+|++.||+|+ +||.++ .+|+++|||+.||
T Consensus 15 ~~~~~~e~~~WIe~~l~~~~~----------~~l~~~L~DGvvLCkL~N~l~P~~v~--ki~~~~--~~f~~~eNI~~Fl 80 (136)
T 1wyp_A 15 DHQREQELREWIEGVTGRRIG----------NNFMDGLKDGIILCEFINKLQPGSVK--KINEST--QNWHQLENIGNFI 80 (136)
T ss_dssp CHHHHHHHHHHHHHHTCCCCC----------SCTTHHHHTSHHHHHHHHHHSTTSSS--CCCCSS--CSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCc----------HHHHHHHccHHhHHHHHHhhCCCCcc--cccccc--cchHHHHHHHHHH
Confidence 678999999999999887642 48999999999999999999999996 888653 3799999999999
Q ss_pred HHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhhh
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKVQ 124 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~~ 124 (130)
++|++ +|+|+.++|++.||||++|+.+|+.||++|++.+...
T Consensus 81 ~a~~~-~Gv~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~a~~~ 122 (136)
T 1wyp_A 81 KAITK-YGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTK 122 (136)
T ss_dssp HHHHH-HTCCGGGCCCHHHHHSCSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCcccccCchHHhcCCCHHHHHHHHHHHHHHHHHC
Confidence 99995 9999999999999999999999999999999886543
No 5
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=207.51 Aligned_cols=112 Identities=29% Similarity=0.529 Sum_probs=96.2
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
++++|+++++||+++++++.++.. .+ ++.+.|+++||||++||+|+|++.||+|+ +|+.+|++ +|+++|||+.||
T Consensus 4 ~~~~e~e~~~WI~~~~~l~~~~~~-~~-~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~--ki~~~~~~-~f~~~eNI~~FL 78 (121)
T 1wyr_A 4 GSSGEEQIVTWLISLGVLESPKKT-IC-DPEEFLKSSLKNGVVLCKLINRLMPGSVE--KFCLDPQT-EADCINNINDFL 78 (121)
T ss_dssp SCCSHHHHHHHHHHHTSSCCCSSC-CS-CHHHHHHHHHHHSHHHHHHHHHHSTTCCS--CCCSSCCS-HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCcCCcccC-CC-CcHHHHHHHHccHHHHHHHHHHhCCCCCC--cCCCCCcc-hHHHHHHHHHHH
Confidence 568899999999999887664321 11 23334789999999999999999999997 88877765 799999999999
Q ss_pred HHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchh
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPK 122 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~ 122 (130)
++|++ +|+ ++|++.||||++|+.+|+.||++|++.+.
T Consensus 79 ~a~~~-~g~---~~F~~~DL~e~kn~~~V~~cL~aL~~~~~ 115 (121)
T 1wyr_A 79 KGCAT-LQV---EIFDPDDLYSGVNFSKVLSTLLAVNKATE 115 (121)
T ss_dssp HHHHH-HTC---CCCCHHHHHTCSCHHHHHHHHHHHHHHHS
T ss_pred HHHHH-cCC---CccCHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99995 997 69999999999999999999999998864
No 6
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=211.04 Aligned_cols=106 Identities=26% Similarity=0.458 Sum_probs=96.8
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
++++++++++||+++++.+.+ .+|+++|+||++||+|+|++.||+|+ +||.++ .+|+++|||+.||
T Consensus 15 ~~~~~~e~~~WIe~~l~~~i~----------~~l~~~L~DGvvLCkL~N~l~P~~v~--kin~~~--~~f~~~eNI~~FL 80 (146)
T 1wyn_A 15 DPQKEAELRTWIEGLTGLSIG----------PDFQKGLKDGTILCTLMNKLQPGSVP--KINRSM--QNWHQLENLSNFI 80 (146)
T ss_dssp CTTHHHHHHHHHHHHHCCCCC----------SCHHHHHHTTSHHHHHHHHHCTTSCS--CCCCSS--CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCc----------HHHHHHHccHHHHHHHHHHhCCCCcc--cccccc--ccccHHHHHHHHH
Confidence 678899999999999987642 48999999999999999999999996 888653 3799999999999
Q ss_pred HHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchh
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPK 122 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~ 122 (130)
++|++ +|||+.++|++.||||++|+.+|+.||++|++.+.
T Consensus 81 ~a~~~-~Gv~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~a~ 120 (146)
T 1wyn_A 81 KAMVS-YGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAK 120 (146)
T ss_dssp HHHHH-HTCCSSSCCCHHHHHTCSCSHHHHHHHHHHHHHHG
T ss_pred HHHHH-cCCCcccccChhHHHhcCChHHHHHHHHHHHHHHH
Confidence 99995 99999999999999999999999999999998863
No 7
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=204.02 Aligned_cols=109 Identities=31% Similarity=0.557 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhH-HHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDL-ALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l-~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
++.++|+++||+++++++.++. |.++.++| .++|||||+||+|+|++.||+|+ +|+.+|++ +|+++|||+.||
T Consensus 11 ~~~~~e~~~WI~~~~~L~~~~~---~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~--kI~~~~~~-~f~~~eNI~~FL 84 (126)
T 2l3g_A 11 MNSAEQTVTWLITLGVLESPKK---TISDPEGFLQASLKDGVVLCRLLERLLPGTIE--KVYPEPRS-ESECLSNIREFL 84 (126)
T ss_dssp CCHHHHHHHHHHHTTSSCCCSS---CCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCS--CCCSSCCS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCC---CCCChhhHHHHHHccHHHHHHHHHHhCCCCCC--ccCCCCCc-chHHHHHHHHHH
Confidence 4789999999999987555432 11234566 69999999999999999999997 88877765 799999999999
Q ss_pred HHHHhh-cCCCccCCCCccccccccChHHHHHHHHHHhCch
Q psy6172 82 QICRNY-FDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCP 121 (130)
Q Consensus 82 ~~c~~~-~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~ 121 (130)
+||+ . +|+ ++|++.||||++|+.+|+.||++|++.+
T Consensus 85 ~a~~-~~~g~---~lF~t~DL~e~kn~~~V~~cL~aL~~~~ 121 (126)
T 2l3g_A 85 RGCG-ASLRL---ETFDANDLYQGQNFNKVLSSLVTLNKVT 121 (126)
T ss_dssp HHHH-HTSCC---CCCCHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCC---CccCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 9999 6 886 6999999999999999999999999885
No 8
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=100.00 E-value=5.4e-35 Score=245.80 Aligned_cols=126 Identities=49% Similarity=0.937 Sum_probs=117.5
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
.|+|+||++||++|++++.++..+.|+.+..+|.++||||++||+|+|++.|++|+.++|+..|++++|+++|||++||+
T Consensus 4 ~~~w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~ 83 (587)
T 3ky9_A 4 KELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLS 83 (587)
T ss_dssp -CHHHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHH
Confidence 47899999999999999999888888888999999999999999999999999998888987777778999999999999
Q ss_pred HH-HhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhhhhhcCCC
Q psy6172 83 IC-RNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKVQKQKNIK 130 (130)
Q Consensus 83 ~c-~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~~~~~~~~ 130 (130)
|| + ++|||+.++|++.||||++|+.+|+.||++|++.+.|++. |+.
T Consensus 84 ~~~~-~~g~~~~~~f~~~Dl~~~~~~~~V~~~l~~l~~~~~~~~~-g~~ 130 (587)
T 3ky9_A 84 TCCE-KFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTPIAQNR-GIM 130 (587)
T ss_dssp HHHH-TTCCCTTSSCCHHHHHTCSCHHHHHHHHHHHHHSTTTGGG-TCC
T ss_pred HHHH-HcCCCHHHcCCchhhhccCCcchHHHHHHHHhhhhhhhcc-CCC
Confidence 99 6 5999999999999999999999999999999999999988 863
No 9
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=7.7e-35 Score=210.55 Aligned_cols=106 Identities=23% Similarity=0.332 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
.++|+++||+++++.+.+ +.++|.++|+|||+||+|+|++.||+|+ +|+.++.+ +|+++|||+.||+||
T Consensus 12 ~~~e~~~WIe~~l~~~l~--------~~~~l~~~LkdGvvLCkL~N~l~P~~i~--kI~~~~~~-~f~~~eNI~~FL~a~ 80 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTDLG--------PTSTFEQSLRNGVVLALLVQKFQPDKLI--KIFYSNEL-QFRHSDNINKFLDFI 80 (159)
T ss_dssp HHHHHHHHHHHHHTSCCC--------CGGGHHHHTTTSHHHHHHHHHHCTTSCC--CCCCCSSC-CTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCC--------ChHHHHHHHcchHHHHHHHHHhCCCCcc--ccccccCC-cchHHHHHHHHHHHH
Confidence 457999999999987653 3469999999999999999999999996 88865444 799999999999999
Q ss_pred HhhcCCCccCCCCccccccccChHHHHHHHHHHhCchh
Q psy6172 85 RNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPK 122 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~ 122 (130)
++ +|||+.++|++.||||++|+.+|+.||++|++.+.
T Consensus 81 ~~-~Gv~~~~lF~~~DL~e~kn~~~Vi~~L~aL~~~~~ 117 (159)
T 1p2x_A 81 HG-IGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLS 117 (159)
T ss_dssp HH-TTCCGGGCCCHHHHSSCSCHHHHHHHHHHHHHHHH
T ss_pred HH-cCCCcccccCHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 95 99999999999999999999999999999998853
No 10
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=214.19 Aligned_cols=106 Identities=18% Similarity=0.314 Sum_probs=94.4
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCC-------cccchhhhhhhHHH
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQK-------PQLAQFLCLRNIRI 79 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~-------~~~~~f~~~eNI~~ 79 (130)
+++++||+++++.+.+ +.++|.++|+|||+||+|+|++.||+|+.++|+.+ +++ +|+++|||++
T Consensus 28 ~e~~~WIe~~lg~~lp--------~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~-~f~~~eNI~~ 98 (190)
T 2rr8_A 28 EEAKRWMEACLGEDLP--------PTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGL-HFRHTDNVIQ 98 (190)
T ss_dssp HHHHHHHHHHSCCCCC--------CHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCC-CSSTHHHHHH
T ss_pred HHHHHHHHHHhCCCCC--------ChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCC-cchHHHHHHH
Confidence 8999999999987653 34699999999999999999999999976677432 233 7999999999
Q ss_pred HHHHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchh
Q psy6172 80 FIQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPK 122 (130)
Q Consensus 80 Fl~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~ 122 (130)
||+||++ +|||+.++|++.||||++|+.+|+.||++|++.+.
T Consensus 99 FL~ac~~-~Gvp~~~lFet~DL~e~kn~~~Vi~cL~aL~~~a~ 140 (190)
T 2rr8_A 99 WLNAMDE-IGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLF 140 (190)
T ss_dssp HHHGGGG-TTCCSTTCCCHHHHTCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCCccccCCHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999995 99999999999999999999999999999999863
No 11
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.6e-34 Score=212.67 Aligned_cols=105 Identities=17% Similarity=0.297 Sum_probs=94.0
Q ss_pred HHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCc------ccchhhhhhhHHHHH
Q psy6172 8 ECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKP------QLAQFLCLRNIRIFI 81 (130)
Q Consensus 8 e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~------~~~~f~~~eNI~~Fl 81 (130)
|+++||+++++.+.+ +..+|.++|+||++||+|+|++.||+|+.++|+.+| ...+|+++|||++||
T Consensus 51 e~~~WIe~~lg~~l~--------~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL 122 (193)
T 3i6x_A 51 EAKRWMEACLGEDLP--------PTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWL 122 (193)
T ss_dssp HHHHHHHHHHSSCCC--------CGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC--------ChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHH
Confidence 899999999987763 235999999999999999999999999877886421 123799999999999
Q ss_pred HHHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCch
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCP 121 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~ 121 (130)
+||++ +|||+.++|++.||||++|+.+|+.||++|++.+
T Consensus 123 ~ac~~-~Gvp~~~lFet~DL~e~kn~~~V~~cL~aL~~~a 161 (193)
T 3i6x_A 123 NAMDE-IGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYL 161 (193)
T ss_dssp HHHHH-HTCCGGGCCCHHHHHSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCcccCCCcHHHhcCCCHHHHHHHHHHHHHHH
Confidence 99995 9999999999999999999999999999999886
No 12
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=4.6e-34 Score=213.59 Aligned_cols=107 Identities=22% Similarity=0.319 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHH
Q psy6172 4 DLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 4 ~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
+.++|+++||+++++++.+ +.++|+++|+|||+||+|+|++.|++|+ +|+.++.+ +|+++|||+.||+|
T Consensus 55 ~~~~e~~~WIe~~l~~~l~--------~~~~f~~~LrDGvvLCkLiN~l~P~sv~--kI~~~s~~-~f~~~eNI~~FL~a 123 (203)
T 1p5s_A 55 CRVDEAKKWIEECLGTDLG--------PTSTFEQSLRNGVVLALLVQKFQPDKLI--KIFYSNEL-QFRHSDNINKFLDF 123 (203)
T ss_dssp HHHHHHHHHHHHHHTSCCC--------CGGGHHHHHTTSHHHHHHHHHHCTTSCC--CCCCCSSS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCC--------ChHHHHHHHcchHHHHHHHHHhCCCCcc--cccCCCCC-cchHHHHHHHHHHH
Confidence 4678999999999987653 3469999999999999999999999995 88655444 79999999999999
Q ss_pred HHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchh
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPK 122 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~ 122 (130)
|++ +|||+.++|++.||||++|+.+|+.||++|++.+.
T Consensus 124 c~~-~Gvp~~~lF~t~DL~e~kn~~~Vi~~L~aL~~~a~ 161 (203)
T 1p5s_A 124 IHG-IGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLS 161 (203)
T ss_dssp HHH-TTCCGGGCCCHHHHHSCSCHHHHHHHHHHHHHHHH
T ss_pred HHH-cCCCcccccCHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 995 99999999999999999999999999999998753
No 13
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=131.78 Aligned_cols=112 Identities=19% Similarity=0.276 Sum_probs=93.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
++.++.+.+||++.+..... .....+|++.|+||++||+|+|.+.|++++ +++.+|.+ .|+++|||+.||+
T Consensus 17 ~~q~~~f~~WIN~~L~~~~~------~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~--~~~~~p~~-~~~~~eNv~~aL~ 87 (129)
T 2yrn_A 17 EDQKRIYTDWANHYLAKSGH------KRLIRDLQQDVTDGVLLAQIIQVVANEKIE--DINGCPKN-RSQMIENIDACLN 87 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTCC------CSCCSCHHHHSSSSHHHHHHHHHHTTCCCT--TCCSSCCS-TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCC------CccchhHHHHcccHHHHHHHHHHHhcCCcc--cccCCCCc-HHHHHHHHHHHHH
Confidence 46777999999997654321 112469999999999999999999999997 78766664 8999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHhCchhhhhh
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSLCPKVQKQ 126 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~~~~~~~~ 126 (130)
++++ +|++..++ .++|+++ .|...|+..|.+|.++-.++++
T Consensus 88 ~~~~-~gv~~~~i-~~~DI~d-gn~~~iL~Llw~L~r~~q~~~~ 128 (129)
T 2yrn_A 88 FLAA-KGINIQGL-SAEEIRN-GNLKAILGLFFSLSRYKQQQQQ 128 (129)
T ss_dssp HHHH-HTCCCTTC-CHHHHHH-TCHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHH-hCCcccCC-Chhhhhc-CCHhHHHHHHHHHHHHHhhhcC
Confidence 9995 99998875 7999998 6799999999999887666554
No 14
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.76 E-value=1.2e-18 Score=144.58 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccc-cccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWS-EASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~-~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
+++++++.+||++.++...+.+...| ++.+.+|++.|+||++||+|+|.+.|+++++++++.+|.+++|+++|||+.||
T Consensus 6 ~~q~~~f~~WIN~~L~~~~~~~~~l~~~~~v~~l~~dL~DGv~L~~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi~~~L 85 (506)
T 1pxy_A 6 QSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCL 85 (506)
T ss_dssp -CTHHHHHHHHHHHHTTCTTTTTTCSCCTTSSHHHHHSTTSHHHHHHHHHHSTTSSCGGGSCCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCccccccCCCCCchhHHHHHhcchHHHHHHHHHHcCCCCCccccCccccccHHHHHHHHHHHH
Confidence 46788999999999887644332222 45678999999999999999999999999878898776656899999999999
Q ss_pred HHHHhhcCCCccCCCCccccccccCh
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDF 107 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~ 107 (130)
++|+. +|++..++ ++.||+|+++.
T Consensus 86 ~~~k~-~g~~~~~i-~~~Dl~dg~~~ 109 (506)
T 1pxy_A 86 NSAKA-VGCSVVNI-GTQDLAEGRPH 109 (506)
T ss_dssp HHHHH-TTCCCTTC-CHHHHHHTCHH
T ss_pred HHHHH-hCCCcCCC-CHHHHhcCChH
Confidence 99995 99999986 99999999864
No 15
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.74 E-value=1.7e-17 Score=128.28 Aligned_cols=113 Identities=20% Similarity=0.279 Sum_probs=88.9
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccc-cccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWS-EASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIF 80 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~-~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~F 80 (130)
++++++++++||++.+..+.+.+...| ++.+.+|++.|+||++||+|+|.+.|+++++++++.+| +..|+++|||+.|
T Consensus 22 ~~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~-~~~~~~~eNv~~a 100 (275)
T 1aoa_A 22 SEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLA 100 (275)
T ss_dssp CHHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSS-CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCC-CCHHHHHHHHHHH
Confidence 568899999999998876533221112 24567999999999999999999999999888888654 3479999999999
Q ss_pred HHHHHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 81 IQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 81 l~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
|+++++ +|++... +++.||++++ ...++.-|..|.
T Consensus 101 L~~~k~-~g~~l~~-I~~~DIvdg~-~~liLgLlw~li 135 (275)
T 1aoa_A 101 LNSASA-IGCHVVN-IGAEDLRAGK-PHLVLGLLWQII 135 (275)
T ss_dssp HHHHHH-TTCCCTT-CCHHHHHTTC-HHHHHHHHHHHH
T ss_pred HHHHHH-cCCcccC-CCHHHHHcCc-HHHHHHHHHHHH
Confidence 999995 9999886 6999999986 334444444443
No 16
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.67 E-value=3e-16 Score=130.44 Aligned_cols=113 Identities=16% Similarity=0.256 Sum_probs=88.0
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccc-cccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCC----cccchhhhhhh
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWS-EASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQK----PQLAQFLCLRN 76 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~-~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~----~~~~~f~~~eN 76 (130)
++++++++.+||++.++.....+...| ++.+.+|++.|+||++||+|+|.+.|+++++++++.+ |. ..|+++||
T Consensus 10 ~~~q~~~f~~WIN~~L~~~~~~~~~lpi~~~v~dl~~dL~DG~~L~~Lie~l~~~~i~~~~i~~~~~~~~~-~~~~~~eN 88 (513)
T 1rt8_A 10 NEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPL-DNFKCIEN 88 (513)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTTGGGCSCCTTSTHHHHHTTTSHHHHHHHHHHSTTSSCGGGSCCCC---CC-CHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccCCccccccCCCCCchHHHHHHhhcHHHHHHHHHHHcCCCcchhhcCCccccCcc-cHHHHHHH
Confidence 578899999999998876533221112 3456799999999999999999999999987788753 33 47999999
Q ss_pred HHHHHHHHHhhcCCCccCCCCccccccccChHHHHHHHHHH
Q psy6172 77 IRIFIQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKL 117 (130)
Q Consensus 77 I~~Fl~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L 117 (130)
++.||++++. +|++....|++.||++++. ..++--|..|
T Consensus 89 i~~~L~~~k~-~g~~~l~~i~~~DI~dg~~-~liLgLiW~l 127 (513)
T 1rt8_A 89 NNVVINSAKA-MGGISITNIGAGDILEGRE-HLILGLVWQI 127 (513)
T ss_dssp HHHHHHHHHH-HSSCCCSSCCHHHHHTTCH-HHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCccCCcCHHhhhcCCH-HHHHHHHHHH
Confidence 9999999995 9996666799999999863 3444444433
No 17
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=99.57 E-value=6.4e-15 Score=101.96 Aligned_cols=84 Identities=17% Similarity=0.335 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
-+|+.+||+++++.+.. .. |.|+||+++|+|+|.|.||+|++++|+-.+++ +|.+++|+..|.++++
T Consensus 7 r~ElL~WIN~~L~~~~~--------ki----E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~-e~e~~~N~k~lq~af~ 73 (123)
T 2qjz_A 7 RHDMLAWINESLQLNLT--------KI----EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKL-EHEYIQNFKILQAGFK 73 (123)
T ss_dssp HHHHHHHHHHHHTCCCC--------CG----GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCc--------hH----HHcCchHHHHHHHHHHccCCCcHHHhccCCCC-hHHHHHHHHHHHHHHH
Confidence 36899999999987753 11 57999999999999999999998899844454 8999999999999999
Q ss_pred hhcCCCccCCCCcccccccc
Q psy6172 86 NYFDIAENDLFEPSMLFDFG 105 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~ 105 (130)
+ +||+. .+..+.|.-++
T Consensus 74 k-~gV~k--~i~v~kLvkgk 90 (123)
T 2qjz_A 74 R-MGVDK--IIPVDKLVKGK 90 (123)
T ss_dssp H-HTCCC--CCCHHHHTTCC
T ss_pred H-cCCCC--ccCHHHHHcCC
Confidence 5 99996 47888888887
No 18
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.57 E-value=2.7e-15 Score=115.02 Aligned_cols=101 Identities=11% Similarity=0.170 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
+..+++++.||++.+.... +...+|++.|+||++||+|+|.+.|+.++ +++ .|++ .|+++|||+.||+
T Consensus 26 ~~q~~~f~~WiN~~L~~~~--------~~v~~l~~dl~DGv~L~~Lle~l~~~~v~--k~~-~~~~-~~~~~eNi~~aL~ 93 (254)
T 1wku_A 26 KQQRKTFTAWCNSHLRKAG--------TQIENIEEDFRNGLKLMLLLEVISGERLP--RPD-KGKM-RFHKIANVNKALD 93 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGT--------CCCSCTTTTTTTSHHHHHHHHHHHCSCCC--CCC-SCCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccccC--------CCccCHHHHccCHHHHHHHHHHhCcCCCC--CCC-CCcc-HHHHHHhHHHHHH
Confidence 4567899999999875432 23469999999999999999999999997 454 3343 7999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
+++. .|++... .++.|+++| |...++--|..|-
T Consensus 94 ~~k~-~gv~lv~-I~~~DIvdG-~~kliLgLlW~li 126 (254)
T 1wku_A 94 FIAS-KGVKLVS-IGAEEIVDG-NLKMTLGMIWTII 126 (254)
T ss_dssp HHHT-TTCCCCS-CCHHHHHHC-CHHHHHHHHHHHH
T ss_pred HHHH-cCCCccC-CCHHHHhcc-chHHHHHHHHHHH
Confidence 9995 9999876 599999998 4555665555553
No 19
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.56 E-value=4.5e-15 Score=113.12 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
+..++..+.||++.+.... +...+|++.|+||++||+|+|.+.|+.+. ++++.+|.+ .|+++||++.||+
T Consensus 19 ~~q~~~f~~WiN~~L~~~~--------~~v~dl~~dL~DGv~L~~Lle~L~~~~~~-~~~n~~~~~-~~~~~eNv~~aL~ 88 (245)
T 2wa7_A 19 KIQQNTFTRWCNEHLKCVN--------KRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTF-RQMQLENVSVALE 88 (245)
T ss_dssp GHHHHHHHHHHHHHHGGGT--------CCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccC--------CCccCHHHHcccHHHHHHHHHHHcCCCCc-hhcCCCCCc-HHHHHHHHHHHHH
Confidence 4678899999999865321 23469999999999999999999999984 578877664 7999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
++++ +|++... .++.|+++|+ ...++.-|..|.
T Consensus 89 ~~k~-~g~~lv~-I~~~DIvdG~-~kliLgLlW~li 121 (245)
T 2wa7_A 89 FLDR-ESIKLVS-IDSKAIVDGN-LKLILGLVWTLI 121 (245)
T ss_dssp HHHH-TTCCCCS-CCHHHHHTTC-HHHHHHHHHHHH
T ss_pred HHHH-cCCcccC-CCHHHhhCCC-HHHHHHHHHHHH
Confidence 9995 9999876 5999999996 444555455443
No 20
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=5.2e-15 Score=106.30 Aligned_cols=87 Identities=16% Similarity=0.359 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
.+.++|+.+||+++++++.. .. |.|+||+++|+|+|.|.||+|+.++|+-.+++ +|.+++|+..|.+
T Consensus 21 ~~sr~ElL~WIN~~L~~~~~--------ki----E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~-e~e~~~N~k~lQ~ 87 (159)
T 1wyo_A 21 NLSRHDMLAWVNDSLHLNYT--------KI----EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKL-EHEYIHNFKVLQA 87 (159)
T ss_dssp CCCHHHHHHHHHHHSCCCCS--------SG----GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCS-SHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHCCCCc--------hh----hhcCccHHHHHHHHHHccCCCcHhhhccCCCC-hHHHHHHHHHHHH
Confidence 35678999999999987753 11 57999999999999999999998888844454 7999999999999
Q ss_pred HHHhhcCCCccCCCCcccccccc
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFG 105 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~ 105 (130)
++++ +||+. .+..+.|.-++
T Consensus 88 af~k-~gV~k--~ipV~kLvkgk 107 (159)
T 1wyo_A 88 AFKK-MGVDK--IIPVEKLVKGK 107 (159)
T ss_dssp HHHH-HTCCC--CCCHHHHTTTC
T ss_pred HHHH-cCCCC--ccCHHHHhcCC
Confidence 9995 99996 48888998888
No 21
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.50 E-value=5.7e-14 Score=116.76 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcc----cchhhhhhhHHH
Q psy6172 4 DLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQ----LAQFLCLRNIRI 79 (130)
Q Consensus 4 ~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~----~~~f~~~eNI~~ 79 (130)
..++..+.||++.... +.+.+|++.|+||++||+|++++.||++.+++++.+|. ...|+++||++.
T Consensus 285 ~q~k~f~~WiN~~~~~----------~~v~~l~~DL~DG~~L~~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~ 354 (513)
T 1rt8_A 285 REARVFTLWLNSLDVT----------PSIHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNY 354 (513)
T ss_dssp HHHHHHHHHHHHTTCS----------SCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC----------CCccCHHHHHhhHHHHHHHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHH
Confidence 3456788999997431 23569999999999999999999999998889986553 347999999999
Q ss_pred HHHHHHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 80 FIQICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 80 Fl~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
+|+++++ .|++... +++.|+++|+ ...++--|..|.
T Consensus 355 al~~~~~-~gv~lv~-i~~~DIvdg~-~~~~LgLlW~li 390 (513)
T 1rt8_A 355 AVDLGKN-QGFSLVG-IQGADITDGS-RTLTLALVWQMM 390 (513)
T ss_dssp HHHHHHH-TTCCCTT-CCHHHHHTTC-HHHHHHHHHHHH
T ss_pred HHHHHHH-cCceeec-cchhhhhcCC-chhhHHHHHHHH
Confidence 9999995 9999876 8999999986 445555555554
No 22
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.46 E-value=1.1e-13 Score=105.25 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
+..++...+||++.+..+.... .+....+|++.|+||++||+|+|.+.|+.++ +. .+++ +|+++||++.||+
T Consensus 11 ~~q~~~f~~WiN~~L~~~~~~~---~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~--~~--~~~~-~~~~~eNv~~aL~ 82 (245)
T 1sh5_A 11 RVQKKTFTKWVNKHLIKHWRAE---AQRHISDLYEDLRDGHNLISLLEVLSGDSLP--RE--KGRM-RFHKLQNVQIALD 82 (245)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGG---GCCCCSCTTTTTTTSHHHHHHHHHHHCCCCC--CC--CCCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccc---CCCCccchHhhccCHHHHHHHHHHhcCcccc--CC--CCcc-hHHHHHhHHHHHH
Confidence 3567788899999987642100 1234579999999999999999999999987 32 3333 7999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
+++. .|++... .++.||++|+ ...++.-|..|.
T Consensus 83 ~~k~-~g~~l~~-I~~~DIvdg~-~k~iLgLlw~li 115 (245)
T 1sh5_A 83 YLRH-RQVKLVN-IRNDDIADGN-PKLTLGLIWTII 115 (245)
T ss_dssp HHHH-TTCCCCS-CCHHHHHTTC-HHHHHHHHHHHH
T ss_pred HHHH-cCCcccC-CChHhhhccc-HHHHHHHHHHHH
Confidence 9995 9999887 4999999995 445555555553
No 23
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.45 E-value=9.3e-14 Score=105.82 Aligned_cols=100 Identities=15% Similarity=0.174 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
+..++.+.+||++.++.... +...+|++.|+||++||+|+|.|.|+.++ +. .|+ ..|+++||++.||+
T Consensus 15 ~~q~~~f~~WiN~~L~~~~~-------~~v~dl~~dl~DG~~L~~Lle~l~~~~~~--~~--~~~-~~~~~~eNv~~aL~ 82 (246)
T 1dxx_A 15 DVQKKTFTKWVNAQFSKFGK-------QHIENLFSDLQDGRRLLDLLEGLTGQKLP--KE--KGS-TRVHALNNVNKALR 82 (246)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-------CCCSCTTTTTTTSHHHHHHHHHHHSCCCC--CC--CCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCC-------CCccCHHHHhCcHHHHHHHHHHHcCCcCC--CC--CCc-cHHHHHHHHHHHHH
Confidence 46678899999998764321 13469999999999999999999999886 33 233 37999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHH
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKL 117 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L 117 (130)
++++ +|++... +++.||++|+ ...++.-|..|
T Consensus 83 ~~k~-~g~~l~~-I~~~DIvdg~-~~liL~Llw~l 114 (246)
T 1dxx_A 83 VLQN-NNVDLVN-IGSTDIVDGN-HKLTLGLIWNI 114 (246)
T ss_dssp HHHH-TTCCCTT-CCHHHHHTTC-HHHHHHHHHHH
T ss_pred HHHH-cCCcccc-CCHHHhhccc-HHHHHHHHHHH
Confidence 9995 9999886 8999999995 44444444444
No 24
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.40 E-value=5.9e-13 Score=92.93 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++....||++.+.... ....+|+..|+||++||+|++.+.|+.+++.+++..|.+ .|+..||++..|++++
T Consensus 24 ~ktft~WiN~~L~~~~--------~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~-r~~kieNv~~aL~~lk 94 (131)
T 2vzc_A 24 KKTLITFVNKHLNKLN--------LEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDS-FEQKVLNVSFAFELMQ 94 (131)
T ss_dssp HHHHHHHHHHHHGGGT--------CCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC--------CcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCc-HHHHHHHHHHHHHHHH
Confidence 4458899999754221 135699999999999999999999999988888877764 7999999999999999
Q ss_pred hhcCCCccCCCCccccccccChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFGDFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L 117 (130)
+ .|++-.. ..+.|+.+|. ...++--|..|
T Consensus 95 ~-~gi~l~~-I~~~DIvdGn-~kliLgLiW~l 123 (131)
T 2vzc_A 95 D-GGLEKPK-PRPEDIVNCD-LKSTLRVLYNL 123 (131)
T ss_dssp H-TTCCCCS-SCHHHHHTTC-HHHHHHHHHHH
T ss_pred H-cCCCcCC-CCHHHhhCCC-HHhHHHHHHHH
Confidence 5 9998765 7999999996 44555555544
No 25
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.39 E-value=4.4e-13 Score=104.93 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHH
Q psy6172 4 DLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 4 ~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
..++..+.||++.+.... +.+.+|++.|+||++||+|+|.+.|+.++. . .+++ .|+++||++.+|++
T Consensus 73 vQkktft~WINs~L~~~~--------~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~--~--~~~~-r~~kleNvn~aL~~ 139 (296)
T 3f7p_A 73 VQKKTFTKWVNKHLIKAQ--------RHISDLYEDLRDGHNLISLLEVLSGDSLPR--E--KGRM-RFHKLQNVQIALDY 139 (296)
T ss_dssp HHHHHHHHHHHHHHGGGT--------CCCSCTTTTTTTSHHHHHHHHHHHCCCCCC--C--CCSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCC--------CCcccHHHHHhhHHHHHHHHHHhcCCcccc--c--CCcC-hhhhhhhHHHHHHH
Confidence 477889999999875432 235699999999999999999999999973 2 2343 79999999999999
Q ss_pred HHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
+++ .|++-.. ..+.|+.+| |...++--|..|-
T Consensus 140 lk~-~gv~lv~-I~~~DIvdG-n~kliLgLlW~Li 171 (296)
T 3f7p_A 140 LRH-RQVKLVN-IRNDDIADG-NPKLTLGLIWTII 171 (296)
T ss_dssp HHH-TTCCCTT-CCHHHHHTT-CHHHHHHHHHHHH
T ss_pred HHH-hCccccC-CChhhhhcc-chHHHHHHHHHhh
Confidence 995 9998765 689999999 5666666666654
No 26
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.32 E-value=2.6e-12 Score=99.45 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
.++....||++.+... ++.+.+|++.|+||++||+|++.+.|+.+ +++++.+|.. .|+.+||++.+|+++
T Consensus 48 Qkktft~WiN~~L~~~--------~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l-~~~~~~~p~~-r~~kleNv~~aL~~l 117 (272)
T 3hoc_A 48 QQNTFTRWCNEHLKCV--------SKRIANLQTDLSDGLRLIALLEVLSQKKM-HRKHNQRPTF-RQMQLENVSVALEFL 117 (272)
T ss_dssp HHHHHHHHHHHHHGGG--------TCCCSCTTTTTTTSHHHHHHHHHHHTSCC-SSCCCSSCCS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC--------CCCcccHHHHHhhHHHHHHHHHHHcCCcc-ccccCCCCcc-HHHHHHHHHHHHHHH
Confidence 3456889999986421 12457999999999999999999999998 4578776654 799999999999999
Q ss_pred HhhcCCCccCCCCccccccccChHHHHHHHHHH
Q psy6172 85 RNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKL 117 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L 117 (130)
+. .|++-.. ..+.|+.+|+ ...++.-|..|
T Consensus 118 k~-~gv~lvn-I~~~DIvdGn-~kliLgLlW~L 147 (272)
T 3hoc_A 118 DR-ESIKLVS-IDSKAIVDGN-LKLILGLIWTL 147 (272)
T ss_dssp HH-TTCCCSS-CCHHHHHTTC-HHHHHHHHHHH
T ss_pred HH-cCCcccc-cccchhhcCC-HHHHHHHHHHH
Confidence 95 9998765 6899999995 44555555544
No 27
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.29 E-value=7.7e-12 Score=103.73 Aligned_cols=102 Identities=15% Similarity=0.253 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHH
Q psy6172 4 DLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 4 ~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
..++..+.||++.+.. +.+.+|++.|+||++||+|++.+.|+.+++++++.+|....|+++||++.+|++
T Consensus 276 ~q~ktf~~WiN~~~~~----------~~v~dl~~Dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~ 345 (506)
T 1pxy_A 276 RDERCYRLWINSLGID----------SYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKI 345 (506)
T ss_dssp HHHHHHHHHHTTTTCS----------SCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC----------CCcccHHHHHHhHHHHHHHHHHHcCCccccccccCCccccHHHHHHHHHHHHHH
Confidence 4567889999987531 245799999999999999999999999988888765533489999999999999
Q ss_pred HHhhcCCCccCCCCccccccccChHHHHHHHHHHh
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLS 118 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~ 118 (130)
++. .|++-.. ..+.|+.+|. ...++.-|..|.
T Consensus 346 ~k~-~~v~l~~-I~~~dIvdg~-~kl~L~Liw~li 377 (506)
T 1pxy_A 346 GKQ-LKFSLVN-VAGNDIVQGN-KKLILGLLWQLM 377 (506)
T ss_dssp HHH-TTCCCCS-CCHHHHHTTC-HHHHHHHHHHHH
T ss_pred HHH-cCCcccC-CCHHHHhcCC-HHHHHHHHHHHH
Confidence 995 9998765 7999999985 444555444443
No 28
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.19 E-value=1.5e-11 Score=106.43 Aligned_cols=102 Identities=11% Similarity=0.145 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQ 82 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~ 82 (130)
+..++....||++.+.... +.+.+|++.|+||++||+|+|.+.|+.++ +++. |+ +.|++++|++.+|+
T Consensus 7 ~~q~~~f~~Win~~L~~~~--------~~v~~l~~dl~DG~~L~~l~e~l~~~~~~--~~~~-~~-~~~~~~eN~~~~l~ 74 (863)
T 1sjj_A 7 KQQRKTFTAWCNSHLRKAG--------TQIENIEEDFRDGLKLMLLLEVISGERLA--KPER-GK-MRVHKISNVNKALD 74 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------SCCCCCSSTTSSCHHHHHHHHHTSCCCCC--CSCC-CS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC--------CCccCHHHHhcCHHHHHHHHHHhCCCcee--CCCC-Cc-cHHHHHHHHHHHHH
Confidence 4677899999999864322 23468999999999999999999999997 4553 34 37999999999999
Q ss_pred HHHhhcCCCccCCCCccccccccChHHHHHHHHHHhC
Q psy6172 83 ICRNYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSL 119 (130)
Q Consensus 83 ~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~ 119 (130)
+++. .|++... ..+.|+.+| |...++.-|..|.+
T Consensus 75 ~~~~-~g~~~~~-i~~~di~~g-~~~~~l~l~w~l~~ 108 (863)
T 1sjj_A 75 FIAS-KGVKLVS-IGAEEIVDG-NVKMTLGMIWTIIL 108 (863)
T ss_dssp HHHH-TTCCCTT-CCSHHHHTT-CHHHHHHHHHHHHS
T ss_pred HHHH-cCCccCC-CChHHhhcC-CHHHHHHHHHHHHH
Confidence 9995 9999775 799999999 56667776766644
No 29
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.09 E-value=1.6e-10 Score=91.99 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++....||++.+... ++...+|++.|+||++||+|++.+.+..++ ++++..|++ .++++||++..|++++
T Consensus 19 ~ktFt~WiN~~L~~~--------~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~-~~~~~~p~~-r~~k~eNv~~al~~~~ 88 (347)
T 4b7l_A 19 QNTFTRWCNEHLKSV--------NKRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTF-RQMQLENVSVALEFLD 88 (347)
T ss_dssp HHHHHHHHHHHHGGG--------TCCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcC--------CCCcCCHHHHhcCHHHHHHHHHHHcCCccC-hhhcCCccc-HHHHHHHHHHHHHHHH
Confidence 445779999975321 124579999999999999999999999886 355556654 7999999999999999
Q ss_pred hhcCCCccCCCCccccccccChHHHHHHHHHHhC
Q psy6172 86 NYFDIAENDLFEPSMLFDFGDFFKVLHTLSKLSL 119 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L~~ 119 (130)
+ .|+.-.. ..+.|+.+|+ ...++--|..|-+
T Consensus 89 ~-~g~~lv~-i~~~DIvdGn-~~liLgLiW~li~ 119 (347)
T 4b7l_A 89 R-ESIKLVS-IDSKAIVDGN-LKLILGLVWTLIL 119 (347)
T ss_dssp H-TTCCCSS-CCHHHHHTTC-HHHHHHHHHHHHH
T ss_pred H-hccccCC-CCcchhhcCC-HhhHHHHHHHHHH
Confidence 5 9998765 7999999985 5666666666543
No 30
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.90 E-value=1.3e-09 Score=75.31 Aligned_cols=104 Identities=15% Similarity=0.251 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHH-HHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLA-LTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~-~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
++++..|.++-+..... .....+|. ..++||+.+|.|++++.|+.|++.-+.. +.++.....+|.+..+..+
T Consensus 9 d~~ll~W~N~kl~~~g~------~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~-~~L~~~d~~~Na~~ais~A 81 (124)
T 1wjo_A 9 DDIIVNWVNRTLSEAGK------STSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKS-GNLTEDDKHNNAKYAVSMA 81 (124)
T ss_dssp CHHHHHHHHHHHHHHTC------SCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCC-SSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC------CcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcC-CCCCHHHHHHHHHHHHHHH
Confidence 56889999986532111 12356999 9999999999999999999998765543 2334678899999999999
Q ss_pred HhhcCCCccCCCCccccccccC--hHHHHHHHHHHhC
Q psy6172 85 RNYFDIAENDLFEPSMLFDFGD--FFKVLHTLSKLSL 119 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~n--~~~V~~~L~~L~~ 119 (130)
++ +|++. .-.++|+.+++- +--++.||+..+.
T Consensus 82 rk-lG~~~--~l~pEDIve~~pK~ilt~va~l~~~~~ 115 (124)
T 1wjo_A 82 RR-IGARV--YALPEDLVEVKPKMVMTVFACLMGRGM 115 (124)
T ss_dssp HH-TCCSC--CCCHHHHHHTCTTTTTHHHHHHHHHSC
T ss_pred HH-cCCCc--ccCHHHHhcCcchhhHHHHHHHHHHHh
Confidence 95 99995 578999999852 3345566666543
No 31
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=98.58 E-value=1e-07 Score=64.93 Aligned_cols=97 Identities=19% Similarity=0.303 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++.+..|.+..+..- +...+.+|-...+||.++|.|+++++|+.+++..+. .-...+|+...++.++
T Consensus 9 ~~~LL~W~q~~~~~y-------~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~------~~~~~~n~~~af~~Ae 75 (116)
T 1wyl_A 9 QEELLRWCQEQTAGY-------PGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQ------GLGALEATAWALKVAE 75 (116)
T ss_dssp HHHHHHHHHHHHHHS-------TTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGG------GCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccC-------CCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhc------cCCHHHHHHHHHHHHH
Confidence 467889999875321 112456899999999999999999999999765543 2357899999999998
Q ss_pred hhcCCCccCCCCccccccccChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFGDFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~n~~~V~~~L~~L 117 (130)
+++|+|. +..++|+...-+...|+.-+..+
T Consensus 76 ~~lgi~~--lL~peD~~~~~d~ksv~tYvs~l 105 (116)
T 1wyl_A 76 NELGITP--VVSAQAVVAGSDPLGLIAYLSHF 105 (116)
T ss_dssp HTTCCCC--CSCHHHHHHTSCHHHHHHHHHHH
T ss_pred HHcCCcc--ccCHHHHhcCCchhHHHHHHHHH
Confidence 5699995 78999998875665565555544
No 32
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=2.1e-07 Score=63.63 Aligned_cols=97 Identities=19% Similarity=0.310 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++.+..|++..+..-. ...+.+|-...+||.++|.|+++++|+.+++..+.. -...+|....++.++
T Consensus 11 ~~~LL~W~~~~~~~y~-------~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~------~~~~~n~~~af~~a~ 77 (119)
T 2d89_A 11 SQSLLVWCKEVTKNYR-------GVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNP------QDIKENNKKAYDGFA 77 (119)
T ss_dssp HHHHHHHHHHHTTTCS-------SCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCT------TCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC-------CCCCCCccccccccHHHHHHHHHHCcCcCChhhhcc------cCHHHHHHHHHHHHH
Confidence 5678899998764321 124568989999999999999999999997655532 246789999999888
Q ss_pred hhcCCCccCCCCcccccccc--ChHHHHHHHHHHh
Q psy6172 86 NYFDIAENDLFEPSMLFDFG--DFFKVLHTLSKLS 118 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~--n~~~V~~~L~~L~ 118 (130)
++|++. +..++|+.+.. |-..|+.-+..+-
T Consensus 78 -~LGi~~--ll~peDi~~~~~pD~ksvmtYvs~l~ 109 (119)
T 2d89_A 78 -SIGISR--LLEPSDMVLLAIPDKLTVMTYLYQIR 109 (119)
T ss_dssp -HHTCCC--CSCHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred -HhCCCc--ccCHHHHhccCCCcHHHHHHHHHHHH
Confidence 599995 78999998653 5556666555553
No 33
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=98.55 E-value=2.4e-07 Score=64.15 Aligned_cols=98 Identities=14% Similarity=0.259 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
.++.+..|++..+..-. ...+.+|-...+||.++|.|+++++|+.+++..+. .-...+|+...++.+
T Consensus 8 ~k~~LL~W~q~~~~~y~-------~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~------~~~~~~n~~~af~~A 74 (128)
T 2d87_A 8 IKQMLLDWCRAKTRGYE-------HVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLS------PQNRRQNFEVAFSSA 74 (128)
T ss_dssp HHHHHHHHHHHHSSSCT-------TCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSC------SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCC-------CCCCCCccccccccHHHHHHHHHHCcCcCCHHHcC------ccCHHHHHHHHHHHH
Confidence 45678899998764321 12457999999999999999999999999765543 235689999999999
Q ss_pred HhhcCCCccCCCCcccccccc--ChHHHHHHHHHH
Q psy6172 85 RNYFDIAENDLFEPSMLFDFG--DFFKVLHTLSKL 117 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~--n~~~V~~~L~~L 117 (130)
++++|+|. +..++|+.+.. |-..|+.-+..+
T Consensus 75 e~~lgip~--lL~peD~v~~~~pD~ksvmtYvs~l 107 (128)
T 2d87_A 75 ETHADCPQ--LLDTEDMVRLREPDWKCVYTYIQEF 107 (128)
T ss_dssp HHHHCCCC--CSCHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHcCCCCc--ccCHHHHhccCCccHHHHHHHHHHH
Confidence 96689984 68999997654 445555544444
No 34
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=98.52 E-value=3.7e-07 Score=61.44 Aligned_cols=98 Identities=12% Similarity=0.195 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
.++.+..|.+..+..- +...+.+|-.+.+||.++|.|+++++|+.+++..+. .-...+|+...++.+
T Consensus 4 ~k~~LL~W~q~~~~~y-------~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~------~~~~~~n~~~af~~A 70 (109)
T 1bkr_A 4 AKDALLLWCQMKTAGY-------PNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK------KSNAHYNLQNAFNLA 70 (109)
T ss_dssp HHHHHHHHHHHHTTTC-------TTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCC------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC-------CCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcC------cCCHHHHHHHHHHHH
Confidence 4567889999875421 122456899999999999999999999999766553 235679999999988
Q ss_pred HhhcCCCccCCCCcccccccc-ChHHHHHHHHHH
Q psy6172 85 RNYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKL 117 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L 117 (130)
++++|+|. +.+++|+..+. +-..|+.-+..+
T Consensus 71 e~~lgi~~--ll~~eDv~~~~pD~ksi~tYvs~~ 102 (109)
T 1bkr_A 71 EQHLGLTK--LLDPEDISVDHPDEKSIITYVVTY 102 (109)
T ss_dssp HHHHCCCC--CCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred HHHcCCCc--cCCHHHccCCCCcHHHHHHHHHHH
Confidence 75699994 68999986543 444455444443
No 35
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=98.45 E-value=5.5e-07 Score=62.20 Aligned_cols=97 Identities=10% Similarity=0.196 Sum_probs=70.7
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++.+..|++..+..- +...+.+|-...+||.++|.|+++++|+.+++..+.. -...+|+...++.++
T Consensus 9 k~~LL~W~q~~~~~y-------~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~------~~~~~n~~~af~~Ae 75 (127)
T 1wyq_A 9 KDALLLWCQMKTAGY-------PNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKK------CNAHYNLQNAFNLAE 75 (127)
T ss_dssp THHHHHHHHHHHHTS-------SSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCS------SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-------CCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCc------CCHHHHHHHHHHHHH
Confidence 356789999875321 1124568999999999999999999999998665532 246789999999987
Q ss_pred hhcCCCccCCCCcccccccc-ChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L 117 (130)
+++|+|. +.+++|+..+. |-..|+.-+..+
T Consensus 76 ~~Lgi~~--ll~~eDv~~~~pDeksimtYvs~l 106 (127)
T 1wyq_A 76 KELGLTK--LLDPEDVNVDQPDEKSIITYVATY 106 (127)
T ss_dssp HTTCCCC--CSCTTTSCSSSCCHHHHHHHHHHH
T ss_pred HHcCCCc--ccCHHHhccCCCcHHHHHHHHHHH
Confidence 5699994 68999986543 444454444444
No 36
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=98.42 E-value=4.2e-07 Score=62.02 Aligned_cols=99 Identities=13% Similarity=0.226 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHH
Q psy6172 4 DLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 4 ~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
..++.+..|++..+..-. ...+.+|-.+.+||.++|.|+++++|+.+++..+. .-...+|+...++.
T Consensus 8 ~~~~~LL~W~q~~~~~y~-------~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~------~~~~~~n~~~af~~ 74 (118)
T 1bhd_A 8 NSEKILLSWVRQTTRPYS-------QVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVV------KMSPIERLEHAFSK 74 (118)
T ss_dssp HHHHHHHHHHHHHHTTST-------TCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHH------HSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCC-------CCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhC------cCCHHHHHHHHHHH
Confidence 456778899998764221 12456899999999999999999999999755443 23457899999998
Q ss_pred HHhhcCCCccCCCCcccccccc-ChHHHHHHHHHH
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKL 117 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L 117 (130)
+++++|+|. +..++|+..++ |-..|+.-+..+
T Consensus 75 Ae~~lgi~~--ll~~eDv~~~~pD~ksvmtYvs~l 107 (118)
T 1bhd_A 75 AQTYLGIEK--LLDPEDVAVRLPDKKSIIMYLTSL 107 (118)
T ss_dssp HHHHHCCCC--CSCHHHHHTSCCCHHHHHHHHHHH
T ss_pred HHHHcCCCc--ccCHHHhhcCCCcHHHHHHHHHHH
Confidence 875699994 68999986543 555555555544
No 37
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=98.38 E-value=6.5e-07 Score=61.31 Aligned_cols=96 Identities=15% Similarity=0.334 Sum_probs=71.9
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHHh
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICRN 86 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~~ 86 (130)
+.+..|.+..+..-. ...+.+|-...+||.++|.|+++++|+.+++..+. .-...+|+...++.+++
T Consensus 12 ~~LL~W~q~~~~~y~-------~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~------~~~~~~n~~~af~~Ae~ 78 (121)
T 2d88_A 12 SKLLGWCQRQTDGYA-------GVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD------EQNVEKNNQLAFDIAEK 78 (121)
T ss_dssp CHHHHHHHHHSTTSS-------SCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSC------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCC-------CCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcC------ccCHHHHHHHHHHHHHH
Confidence 457899998774321 12456888999999999999999999999765543 23568999999999885
Q ss_pred hcCCCccCCCCccccccc--cChHHHHHHHHHH
Q psy6172 87 YFDIAENDLFEPSMLFDF--GDFFKVLHTLSKL 117 (130)
Q Consensus 87 ~~Gl~~~~lF~~~DL~e~--~n~~~V~~~L~~L 117 (130)
++|+|. +..++|+.++ -|-..|+.-+..+
T Consensus 79 ~lgi~~--lL~peD~~~~~~pD~ksimtYvs~l 109 (121)
T 2d88_A 79 ELGISP--IMTGKEMASVGEPDKLSMVMYLTQF 109 (121)
T ss_dssp HTCCCC--SSCHHHHHHSSCCCHHHHHHHHHHH
T ss_pred HcCCCC--cCCHHHHhccCCCcHHHHHHHHHHH
Confidence 699994 6899999863 3555555555554
No 38
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=98.32 E-value=1.5e-06 Score=66.30 Aligned_cols=97 Identities=15% Similarity=0.323 Sum_probs=72.6
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++.+..|++..+.. . +.....+|-..++||.++|.|++.++|+.+++..+. .-...+|....++.++
T Consensus 142 ~~~LL~W~~~~~~~-y------~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~------~~~~~~n~~~a~~~A~ 208 (254)
T 1wku_A 142 KEGLLLWCQRKTAP-Y------RNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLR------KDDPIGNLNTAFEVAE 208 (254)
T ss_dssp HHHHHHHHHHHHTT-C------TTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCC------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccC-C------CCCcCCCCccchhhHHHHHHHHHHHCCCcccccccC------cCCHHHHHHHHHHHHH
Confidence 45688999976531 1 112356888899999999999999999999765543 1246789999999998
Q ss_pred hhcCCCccCCCCcccccccc--ChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFG--DFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~--n~~~V~~~L~~L 117 (130)
+.+|+|. +..++|+.++. |-..|+.-+..|
T Consensus 209 ~~lGi~~--~l~peDiv~~~~pD~k~imtyva~l 240 (254)
T 1wku_A 209 KYLDIPK--MLDAEDIVNTPKPDEKAIMTYVSCF 240 (254)
T ss_dssp HHSCCCC--CSCHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHcCCCC--cCCHHHHhccCCCcHHHHHHHHHHH
Confidence 5599995 78999998865 445555555554
No 39
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=98.21 E-value=2.4e-06 Score=65.80 Aligned_cols=83 Identities=17% Similarity=0.315 Sum_probs=66.7
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHHh
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICRN 86 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~~ 86 (130)
.|+..||++++..... =.+.|.+|.+.|++++.|.||+|++++|+-.++. .+....|...+-++-.
T Consensus 18 ~elL~WiN~~L~~~~~------------kiEel~tGaayCQlmd~l~P~~i~l~kVkf~a~~-e~e~i~N~k~LQ~~F~- 83 (268)
T 2r8u_A 18 HDMLAWINESLQLNLT------------KIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKL-EHEYIQNFKILQAGFK- 83 (268)
T ss_dssp HHHHHHHHHHHTCCCC------------CGGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCS-HHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCCcc------------hHHHcccchHHHHHHHHHccCCCchhhccCCCCC-HHHHHHHHHHHHHHHH-
Confidence 6899999999876642 1355899999999999999999999988766554 6778888888777777
Q ss_pred hcCCCccCCCCcccccccc
Q psy6172 87 YFDIAENDLFEPSMLFDFG 105 (130)
Q Consensus 87 ~~Gl~~~~lF~~~DL~e~~ 105 (130)
++|++. .+..+-|.-++
T Consensus 84 k~~I~k--~ipV~kLvkgk 100 (268)
T 2r8u_A 84 RMGVDK--IIPVDKLVKGK 100 (268)
T ss_dssp HTTCCC--CCCHHHHTTTC
T ss_pred HcCCCC--ccCHHHHhccC
Confidence 499985 47777787776
No 40
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=98.15 E-value=4.2e-06 Score=63.18 Aligned_cols=97 Identities=18% Similarity=0.236 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
++.+..|++..+..-. .....+|-..++||.++|.|++.+.|+.+++..+. .-...+|+...++.++
T Consensus 135 ~~~LL~W~~~~~~~~~-------~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~------~~~~~~n~~~a~~~a~ 201 (245)
T 1sh5_A 135 KEKLLLWSQRMVEGYQ-------GLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVY------RQTNLENLDQAFSVAE 201 (245)
T ss_dssp HHHHHHHHHHHTTTST-------TCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHH------HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC-------CcccCCccccccchHHHHHHHHHHCCCCCCHHHcc------cCCHHHHHHHHHHHHH
Confidence 4568899988764311 12356888999999999999999999999755443 1246789999999998
Q ss_pred hhcCCCccCCCCcccccccc-ChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L 117 (130)
+++|+|. +..++|+.+.+ |...|+.-+..|
T Consensus 202 ~~lGi~~--~l~peDi~~~~pd~k~i~tyva~l 232 (245)
T 1sh5_A 202 RDLGVTR--LLDPEDVDVPQPDEKSIITYVSSL 232 (245)
T ss_dssp HHHCCCC--CCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred HhCCCCc--cCCHHHhccCCCcHHHHHHHHHHH
Confidence 5599994 68999997654 555555544444
No 41
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=98.04 E-value=9.4e-06 Score=61.38 Aligned_cols=92 Identities=13% Similarity=0.219 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCC-cccccCCcccchhhhhhhHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACID-MREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~-~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
.++.+..|.+.... . ....+|-..++||.++|.|++.++|+.++ +...+ .-...+|....++.
T Consensus 144 ~~~~LL~W~~~~~~-~---------~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l~------~~~~~~n~~~a~~~ 207 (245)
T 2wa7_A 144 PKQRLLGWIQNKIP-Y---------LPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD------PQKPVDNAREAVQQ 207 (245)
T ss_dssp HHHHHHHHHHHHST-T---------SCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSC------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-C---------CCCCCCcccchhhHHHHHHHHHHCccccccccccC------cccHHHHHHHHHHH
Confidence 35678899998642 1 23468888999999999999999999983 33221 23568899999999
Q ss_pred HHhhcCCCccCCCCcccccccc-ChHHHHHHH
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFG-DFFKVLHTL 114 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L 114 (130)
+++++|+|. +..++|+.+++ +...|+.-+
T Consensus 208 A~~~lGi~~--~l~peDi~~~~~d~ksi~tyv 237 (245)
T 2wa7_A 208 ADDWLGVPQ--VITPEEIIHPDVDEHSVMTYL 237 (245)
T ss_dssp HHHHSCCCC--SSCHHHHTCTTCCHHHHHHHH
T ss_pred HHHhCCCCc--cCCHHHhccCCCcHHHHHHHH
Confidence 995699994 68999999864 444444333
No 42
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=98.02 E-value=8.5e-06 Score=57.38 Aligned_cols=87 Identities=15% Similarity=0.252 Sum_probs=67.9
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHH
Q psy6172 2 SDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 2 ~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl 81 (130)
.-+--.|+..||++++..... . .|.|.+|.+-|++++.|. |+|++++|+-.++. .+....|....-
T Consensus 4 ~~~SR~eLL~WiN~~L~~n~t--------k----IE~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~-e~e~i~NfKlLQ 69 (145)
T 4abo_I 4 GSESRQELLAWINQVTSLGLT--------R----IEDCGKGYAMIQIFDSIY-QDIPLKKVNFECNN-EYQYINNWKVLQ 69 (145)
T ss_dssp ---CHHHHHHHHHHHHTCCCC--------S----GGGGGGSHHHHHHHHHHH-CCSCTTTSCSSCCS-HHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHcCCCcc--------h----HHHccccHHHHHHHHHHh-cCcchhhcccCCCC-HHHHHHHHHHHH
Confidence 334457899999999866542 1 355899999999999999 88998888755554 788999999988
Q ss_pred HHHHhhcCCCccCCCCcccccccc
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFG 105 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~ 105 (130)
++-++ +|++.. +..+.|.-++
T Consensus 70 ~~F~k-~~I~k~--ipV~kLvKgk 90 (145)
T 4abo_I 70 QVFLK-KGIDKV--VDPERLSRCK 90 (145)
T ss_dssp HHHHH-HTCCCC--CCHHHHTTTC
T ss_pred HHHHH-cCCCCc--cCHHHHhccc
Confidence 98885 999864 7777787776
No 43
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=98.00 E-value=8.2e-06 Score=61.72 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQIC 84 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c 84 (130)
.++.+..|++..+..-. .....+|-..++||.++|.|++.+.|+.+++..+. ++ -...+|....++.+
T Consensus 136 ~~~~LL~W~~~~~~~~~-------~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~-~~----~~~~~n~~~a~~~A 203 (246)
T 1dxx_A 136 SEKILLSWVRQSTRNYP-------QVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVV-SQ----QSATQRLEHAFNIA 203 (246)
T ss_dssp HHHHHHHHHHHHHTTCT-------TCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHH-TC----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCC-------CCCcCCCcccchhHHHHHHHHHHHCcCccchhhhc-cc----CCHHHHHHHHHHHH
Confidence 35678899997654221 12356888999999999999999999998755442 11 24578999999998
Q ss_pred HhhcCCCccCCCCcccccccc-ChHHHHHHHHHHh
Q psy6172 85 RNYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKLS 118 (130)
Q Consensus 85 ~~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L~ 118 (130)
++++|+|. +..++|+.+++ |-..|+.-+..|-
T Consensus 204 ~~~lGi~~--~l~peDi~~~~pD~k~i~tyva~l~ 236 (246)
T 1dxx_A 204 RYQLGIEK--LLDPEDVDTTYPDKKSILMYITSLF 236 (246)
T ss_dssp HHTTCCCC--CCCHHHHSSSSCCHHHHHHHHHHHH
T ss_pred HHhCCCCc--cCCHHHhhcCCCcHHHHHHHHHHHH
Confidence 74599994 68999997764 3355555555553
No 44
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=97.88 E-value=2.1e-05 Score=61.36 Aligned_cols=97 Identities=18% Similarity=0.223 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
.+.+..|.+..+.... .....+|-...+||.++|.|++.++|+.+++..+. + -...+|+...++.+.
T Consensus 191 k~~LL~W~n~~~~~y~-------~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~--~----~~~~~N~~~Af~~Ae 257 (296)
T 3f7p_A 191 KEKLLLWSQRMVEGYQ-------GLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVY--R----QTNLENLDQAFSVAE 257 (296)
T ss_dssp HHHHHHHHHHHTTTST-------TCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHT--T----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-------CCcCCCccccccccHHHHHHHHHHCcCccCHHHcC--c----ccHHHHHHHHHHHHH
Confidence 4468899998764211 12456888999999999999999999999765443 1 245789999999994
Q ss_pred hhcCCCccCCCCcccccccc-ChHHHHHHHHHH
Q psy6172 86 NYFDIAENDLFEPSMLFDFG-DFFKVLHTLSKL 117 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L~~L 117 (130)
+++|++. +..++|+...+ |-..|+.-|..|
T Consensus 258 ~~LGi~~--ll~pEDi~~~~pDeksimtyvs~l 288 (296)
T 3f7p_A 258 RDLGVTR--LLDPEDVDVPQPDEKSIITYVSSL 288 (296)
T ss_dssp HHHCCCC--CCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred HhCCCCc--cCCHHHhcCCCCcHHHHHHHHHHH
Confidence 3599984 68899987654 445555544444
No 45
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=97.87 E-value=2.6e-05 Score=60.05 Aligned_cols=88 Identities=14% Similarity=0.227 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCC-cccccCCcccchhhhhhhHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACID-MREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~-~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
.++.+..|.+.-. + .....+|-...+||.++|.|+++++|+.++ +..+. .-...+|....++.
T Consensus 171 ~k~~LL~W~n~~~--~--------~~~I~nFs~sw~DG~af~aLi~~~~P~li~d~~~l~------~~~~~~n~~~Af~~ 234 (272)
T 3hoc_A 171 PKQRLLGWIQNKL--P--------QLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWD------ASKPVTNAREAMQQ 234 (272)
T ss_dssp HHHHHHHHHHHHC--T--------TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSC------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC--C--------CCCCCChhhcccchHHHHHHHHHhCcccccchhhcC------ccCHHHHHHHHHHH
Confidence 3567889998753 1 123568888999999999999999999983 43332 23578999999999
Q ss_pred HHhhcCCCccCCCCcccccccc-ChHHH
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFG-DFFKV 110 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~-n~~~V 110 (130)
+++++|+|. +..++|+.+.+ |...|
T Consensus 235 Ae~~lGi~~--ll~peDiv~~~pD~ksi 260 (272)
T 3hoc_A 235 ADDWLGIPQ--VITPEEIVDPNVDKHSV 260 (272)
T ss_dssp HHHHHCCCC--SSCHHHHTCTTCCHHHH
T ss_pred HHHhCCCCc--cCCHHHhccCCCChHHH
Confidence 996699994 78999999854 44333
No 46
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=97.83 E-value=3.4e-05 Score=61.19 Aligned_cols=92 Identities=13% Similarity=0.214 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCC-cccccCCcccchhhhhhhHHHHHHH
Q psy6172 5 LWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACID-MREVNQKPQLAQFLCLRNIRIFIQI 83 (130)
Q Consensus 5 ~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~-~~~i~~~~~~~~f~~~eNI~~Fl~~ 83 (130)
.++.+..|+++-.. .....+|-.+.+||.++|.|+++++|+.++ +.... .-..++|....++.
T Consensus 141 ~k~~LL~W~~~~~~----------~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~------~~~~~~n~~~Af~~ 204 (347)
T 4b7l_A 141 PKQRLLGWIQNKIP----------YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWD------PQKPVDNAREAMQQ 204 (347)
T ss_dssp HHHHHHHHHHHHCT----------TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSC------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC----------CcccCCCCCCccchHHHHHHHHHhCCccccchhhcC------cCCHHHHHHHHHHH
Confidence 35678899987541 123568889999999999999999999884 33332 23567899999998
Q ss_pred HHhhcCCCccCCCCcccccccc-ChHHHHHHH
Q psy6172 84 CRNYFDIAENDLFEPSMLFDFG-DFFKVLHTL 114 (130)
Q Consensus 84 c~~~~Gl~~~~lF~~~DL~e~~-n~~~V~~~L 114 (130)
+++++|+|. +..++|+...+ |-..|+.=|
T Consensus 205 Ae~~lGip~--ll~peDi~~~~pDeksimtYv 234 (347)
T 4b7l_A 205 ADDWLGVPQ--VITPEEIIHPDVDEHSVMTYL 234 (347)
T ss_dssp HHHHHCCCC--SSCHHHHTCTTCCHHHHHHHH
T ss_pred HHHhcCCCc--ccCHHHcCCCCCChhHHHHHH
Confidence 885699995 78999998765 334444333
No 47
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=97.76 E-value=3.4e-05 Score=59.15 Aligned_cols=94 Identities=13% Similarity=0.099 Sum_probs=65.3
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCccc----ccCCcccchhhhhhhHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMRE----VNQKPQLAQFLCLRNIRIFI 81 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~----i~~~~~~~~f~~~eNI~~Fl 81 (130)
++.+..|.+..+..... ....+|-..++||.++|.|++.+.|+.++... +...+ ...-...+|....+
T Consensus 170 ~~~LL~W~n~~l~~~g~-------~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~-~~~~~~~~n~~~a~ 241 (275)
T 1aoa_A 170 EELLLRWANFHLENSGW-------QKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSG-FNETDDLKRAESML 241 (275)
T ss_dssp HHHHHHHHHHHHHHTTC-------CCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTT-TTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-------CcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccC-CCccCHHHHHHHHH
Confidence 55688999875421110 01468888899999999999999999654211 11111 11345689999999
Q ss_pred HHHHhhcCCCccCCCCccccccccChHHHH
Q psy6172 82 QICRNYFDIAENDLFEPSMLFDFGDFFKVL 111 (130)
Q Consensus 82 ~~c~~~~Gl~~~~lF~~~DL~e~~n~~~V~ 111 (130)
+.++ ++|++. +..++|+.++ |...++
T Consensus 242 ~~A~-~lGi~~--~l~peDi~~~-~~k~i~ 267 (275)
T 1aoa_A 242 QQAD-KLGCRQ--FVTPADVVSG-NPKLNL 267 (275)
T ss_dssp HHHT-TTTCCC--SCCHHHHHTT-CHHHHH
T ss_pred HHHH-HcCCCC--cCCHHHcCCC-ChhHHH
Confidence 9999 499985 6899999976 443333
No 48
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=97.75 E-value=6.1e-05 Score=51.98 Aligned_cols=83 Identities=14% Similarity=0.200 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHH
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICR 85 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~ 85 (130)
-.|+..||++++..... . .|.|.+|.+.|++++.+. |.|++++|+-.++. .+....|....-++-.
T Consensus 12 R~elL~WiN~~L~~n~~--------k----iEel~tGaayCQl~d~l~-g~v~l~kVkf~a~~-e~e~~~N~k~LQ~~f~ 77 (127)
T 2qjx_A 12 RTELLTWLNGLLNLNYK--------K----IEECGTGAAYCQIMDSIY-GDLPMNRVKFNATA-EYEFQTNYKILQSCFS 77 (127)
T ss_dssp HHHHHHHHHHHHTCCCC--------S----GGGGGGSHHHHHHHHHHH-CCSCGGGSCTTCCS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcc--------H----HHHccchHHHHHHHhhhc-cccCccccCCCCCC-HHHHHHHHHHHHHHHH
Confidence 36899999998876653 1 455799999999999999 56888888755543 6888999999999999
Q ss_pred hhcCCCccCCCCcccccccc
Q psy6172 86 NYFDIAENDLFEPSMLFDFG 105 (130)
Q Consensus 86 ~~~Gl~~~~lF~~~DL~e~~ 105 (130)
+ .|++. .+..+.|.-++
T Consensus 78 k-~~I~k--~ipV~kLvKgr 94 (127)
T 2qjx_A 78 R-HGIEK--TVYVDKLIRCK 94 (127)
T ss_dssp H-TTCCC--CCCHHHHTTTC
T ss_pred H-cCCCC--ccCHHHHhccC
Confidence 5 99985 36777777776
No 49
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=97.63 E-value=4.6e-05 Score=65.89 Aligned_cols=96 Identities=17% Similarity=0.355 Sum_probs=71.5
Q ss_pred HHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHHHHHHHhh
Q psy6172 8 ECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIFIQICRNY 87 (130)
Q Consensus 8 e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~Fl~~c~~~ 87 (130)
.+..|++..+. .. +...+.+|-..++||.++|.|++.+.|+.|++..+.. -...+|+...+..+++.
T Consensus 125 ~ll~W~~~~~~-~~------~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~------~~~~~n~~~a~~~a~~~ 191 (863)
T 1sjj_A 125 GLLLWYQRKTA-PY------KNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRK------DDPLTNLNTAFDVAEKY 191 (863)
T ss_dssp TTHHHHHHHHT-TS------TTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGS------CCCGGGCTHHHHHHHHH
T ss_pred HHHHHHHHhcc-CC------CCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCC------CCHHHHHHHHHHHHHHh
Confidence 46789987653 11 1224568889999999999999999999998665542 24578999999999855
Q ss_pred cCCCccCCCCcccccccc--ChHHHHHHHHHHh
Q psy6172 88 FDIAENDLFEPSMLFDFG--DFFKVLHTLSKLS 118 (130)
Q Consensus 88 ~Gl~~~~lF~~~DL~e~~--n~~~V~~~L~~L~ 118 (130)
+|+|. +..|.|+.+.. |-..|+.-|..|-
T Consensus 192 lg~~~--~l~~ed~~~~~~pd~~~~~~y~~~l~ 222 (863)
T 1sjj_A 192 LDIPK--MLDAEDIVGTARPDEKAIMTYVSSFY 222 (863)
T ss_dssp HCCCC--SCCHHHHTTCSSCCHHHHHHHHHHTT
T ss_pred CCCCC--ccCHHHHhCCCCCcHHHHHHHHHHHH
Confidence 99984 78999998764 4466666666553
No 50
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.15 E-value=0.0014 Score=45.16 Aligned_cols=98 Identities=13% Similarity=0.235 Sum_probs=68.3
Q ss_pred CChHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCcccccCCcccchhhhhhhHHHH
Q psy6172 1 MSDDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDMREVNQKPQLAQFLCLRNIRIF 80 (130)
Q Consensus 1 ~~~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~~~i~~~~~~~~f~~~eNI~~F 80 (130)
|++|+-+++-.||.++ +... ...++...+.||+++.+++.+..|..|++... ++..+.-..+.|=+.|
T Consensus 12 l~~ee~~el~~WL~~l---~Ls~-------~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y--~~~~S~~~K~~NW~~l 79 (127)
T 2ee7_A 12 VDEEALHQLYLWVDNI---PLSR-------PKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNY--VPANSLQQKLSNWGHL 79 (127)
T ss_dssp CCHHHHHHHHHHHHHS---CCSC-------CSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSC--CCCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---CCCC-------CCCchhhhccchhHHHHHHHHHCcCccccccc--CCCCcHHHHHHhHHHH
Confidence 5678888999999853 2221 23478888999999999999999998864332 3344456778899988
Q ss_pred H-HHHHhhcCCCccCCCCccc---ccccc--ChHHHHHHHH
Q psy6172 81 I-QICRNYFDIAENDLFEPSM---LFDFG--DFFKVLHTLS 115 (130)
Q Consensus 81 l-~~c~~~~Gl~~~~lF~~~D---L~e~~--n~~~V~~~L~ 115 (130)
- +..++ +|++ +...+ +..++ -..+++..|+
T Consensus 80 n~kvl~k-l~~~----l~~~~i~~i~~~~~Gaie~lL~~L~ 115 (127)
T 2ee7_A 80 NRKVLKR-LNFS----VPDDVMRKIAQCAPGVVELVLIPLR 115 (127)
T ss_dssp HHHTTGG-GTCC----CCHHHHHHHHTTCTTTTHHHHHHHH
T ss_pred HHHHHHH-cCCC----CCHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5 77884 8986 44443 33333 3456666664
No 51
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=95.01 E-value=0.041 Score=39.09 Aligned_cols=73 Identities=14% Similarity=0.169 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhhhcCCCCCc---ccccCCcccchhhhhhhHHH
Q psy6172 3 DDLWRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNNLDPACIDM---REVNQKPQLAQFLCLRNIRI 79 (130)
Q Consensus 3 ~~~e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~l~P~~v~~---~~i~~~~~~~~f~~~eNI~~ 79 (130)
.+....+..|++++.. ..+ -.=++.|.||++|.++++.|.|..... .+++..+...--..+.|+..
T Consensus 8 ~~~~~aLl~W~~tf~~-~~~----------~~~~~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~ 76 (164)
T 1wix_A 8 LPLCDSLIIWLQTFKT-ASP----------CQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKK 76 (164)
T ss_dssp CHHHHHHHHHHTTCCC-SSC----------CCSHHHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCC-CCC----------cCcHHHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHH
Confidence 4677788999987643 211 133577999999999999999987531 24443322112345677777
Q ss_pred HHHHHHh
Q psy6172 80 FIQICRN 86 (130)
Q Consensus 80 Fl~~c~~ 86 (130)
.++...+
T Consensus 77 l~~~i~~ 83 (164)
T 1wix_A 77 VLHGITS 83 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777664
No 52
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=53.53 E-value=6.9 Score=26.87 Aligned_cols=26 Identities=19% Similarity=0.185 Sum_probs=15.3
Q ss_pred hhhhHHHHHHHHHhhcCCCccCCCCccccc
Q psy6172 73 CLRNIRIFIQICRNYFDIAENDLFEPSMLF 102 (130)
Q Consensus 73 ~~eNI~~Fl~~c~~~~Gl~~~~lF~~~DL~ 102 (130)
-..|+..|..+|+ +|.+.+ -|..||-
T Consensus 109 l~nNCEHFvt~cr--~G~~~S--~Qv~~~~ 134 (140)
T 4dot_A 109 TSENCEHFVNELR--YGVARS--DQVRDLE 134 (140)
T ss_dssp CHHHHHHHHHHHH--HCCC-----------
T ss_pred cccChHHHHHHHh--cCCccc--chhhhhh
Confidence 4689999999999 799976 5777764
No 53
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=38.93 E-value=26 Score=21.70 Aligned_cols=38 Identities=16% Similarity=0.234 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhh
Q psy6172 6 WRECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNN 51 (130)
Q Consensus 6 e~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~ 51 (130)
..++.+|+++++-. . ....+.|.+.--||-+|+.|-..
T Consensus 22 ~~dV~~WL~~~gl~-~-------~~Y~~~F~~~~IdG~~Ll~Lt~~ 59 (91)
T 1v85_A 22 TEEVVLWLEQLGPW-A-------SLYRDRFLSERVNGRLLLTLTEE 59 (91)
T ss_dssp HHHHHHHHHHHCGG-G-------HHHHHHHHHTTCCHHHHHHCCHH
T ss_pred HHHHHHHHHHcCCC-H-------HHHHHHHHHhCCCHHHHhcCCHH
Confidence 35899999987420 0 11346788888899999998643
No 54
>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*
Probab=38.51 E-value=19 Score=27.06 Aligned_cols=23 Identities=17% Similarity=0.405 Sum_probs=19.5
Q ss_pred hhhhhhHHHHHHHHHhhcCCCccC
Q psy6172 71 FLCLRNIRIFIQICRNYFDIAEND 94 (130)
Q Consensus 71 f~~~eNI~~Fl~~c~~~~Gl~~~~ 94 (130)
-.+.+.+..|+++|+. +|+...|
T Consensus 248 ~~Q~~~L~~Fy~~ck~-~gi~~~~ 270 (271)
T 3zyl_A 248 LTRMTRISEFLKVAEQ-VGIDRGD 270 (271)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCGGG
T ss_pred HHHHHHHHHHHHHHHH-cCcCcCC
Confidence 3688999999999995 9997654
No 55
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=32.75 E-value=36 Score=21.11 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhhh
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLNN 51 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N~ 51 (130)
.++.+||.++.+.+ .....|.+.=-||-+|..|-..
T Consensus 20 edV~~wL~~l~gl~---------~y~~~F~~~~IdG~~LL~Lt~~ 55 (89)
T 1kw4_A 20 DDVSNFIRELPGCQ---------DYVDDFIQQEIDGQALLRLKEK 55 (89)
T ss_dssp HHHHHHHHTSTTCG---------GGHHHHHHTTCCHHHHHHCCHH
T ss_pred HHHHHHHHHCcChH---------HHHHHHHHhCccHHHHhcCCHH
Confidence 58899998763322 2356888888899999987543
No 56
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=29.92 E-value=29 Score=23.54 Aligned_cols=21 Identities=19% Similarity=0.376 Sum_probs=15.6
Q ss_pred hhhhHHHHHHHHHhhcCCCccCC
Q psy6172 73 CLRNIRIFIQICRNYFDIAENDL 95 (130)
Q Consensus 73 ~~eNI~~Fl~~c~~~~Gl~~~~l 95 (130)
-..|+..|..+|+ +|.+.++-
T Consensus 109 l~nNCEHFvt~cr--yG~~~S~~ 129 (137)
T 4dpz_X 109 TSDNCEHFVNHLR--YGVSRSDQ 129 (137)
T ss_dssp --CHHHHHHHHHH--HSCCCC--
T ss_pred CccChHHHHHHHh--cCCchhcc
Confidence 4689999999999 79987764
No 57
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=26.81 E-value=31 Score=15.97 Aligned_cols=9 Identities=11% Similarity=0.538 Sum_probs=6.9
Q ss_pred HHHHHHHHh
Q psy6172 8 ECAAWLTRC 16 (130)
Q Consensus 8 e~~~WI~~~ 16 (130)
.+++|++++
T Consensus 9 SV~rWmeDL 17 (22)
T 3ro3_B 9 SVQRWMEDL 17 (26)
T ss_pred HHHHHHHHH
Confidence 578899875
No 58
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=24.23 E-value=41 Score=21.79 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.5
Q ss_pred hhhhHHHHHHHHHhhcCC
Q psy6172 73 CLRNIRIFIQICRNYFDI 90 (130)
Q Consensus 73 ~~eNI~~Fl~~c~~~~Gl 90 (130)
-..|+..|..+|| +|.
T Consensus 109 ~~nNCEHFa~~cr--yG~ 124 (125)
T 2lkt_A 109 VSRNCEHFVTQLR--YGK 124 (125)
T ss_dssp HHHHHHHHHHHHH--CSC
T ss_pred CccCHHHHHhhhh--ccC
Confidence 3579999999999 775
No 59
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=24.04 E-value=33 Score=20.98 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCC-CCCccccccccHhhHHHHccchHHHHHHhh
Q psy6172 6 WRECAAWLTRCGVLR-EDHKANWSEASMSDLALTLRDGVVICNLLN 50 (130)
Q Consensus 6 e~e~~~WI~~~~~~~-~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N 50 (130)
..+++.||.-...+- .+. ...++...=.||-.||.+-.
T Consensus 16 ~~~V~~WL~w~~~e~~l~l-------~~~~~~~f~m~G~~Lc~ls~ 54 (82)
T 1sv0_C 16 RADVWKWLINMAVSEGLEV-------TAELPQKFPMNGKALCLMSL 54 (82)
T ss_dssp HHHHHHHHHHHHHHHTCCC-------CTHHHHTCCSCHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHhCCCC-------CCCccccCCCCHHHHHhCCH
Confidence 357889997553211 110 11244433489999999854
No 60
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=24.02 E-value=45 Score=19.74 Aligned_cols=35 Identities=9% Similarity=0.253 Sum_probs=23.6
Q ss_pred HHHHHHHHHhc-CCCCCCccccccccHhhHHHHccchHHHHHHhh
Q psy6172 7 RECAAWLTRCG-VLREDHKANWSEASMSDLALTLRDGVVICNLLN 50 (130)
Q Consensus 7 ~e~~~WI~~~~-~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N 50 (130)
.++.+|+.++. +.+ .-...|.+.=-||-.|..|-.
T Consensus 10 ~~V~~WL~~l~~gl~---------~Y~~~F~~~~i~G~~Ll~L~~ 45 (80)
T 3bs5_B 10 SQVVDWMKGLDDCLQ---------QYIKNFEREKISGDQLLRITH 45 (80)
T ss_dssp HHHHHHHHTSCGGGG---------GGHHHHHHHTCCHHHHHTCCH
T ss_pred HHHHHHHHHHhhhHH---------HHHHHHHHcCCCHHHHHHCCH
Confidence 58899998652 111 234578777778998887643
No 61
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=23.99 E-value=46 Score=19.60 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=24.2
Q ss_pred HHHHHHHHHh-cCCCCCCccccccccHhhHHHHccchHHHHHHhh
Q psy6172 7 RECAAWLTRC-GVLREDHKANWSEASMSDLALTLRDGVVICNLLN 50 (130)
Q Consensus 7 ~e~~~WI~~~-~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N 50 (130)
.++.+|++++ .+.+ .....|.+.=-||-.|+.|-.
T Consensus 9 ~~V~~WL~~~~~gl~---------~y~~~F~~~~I~G~~Ll~L~~ 44 (78)
T 3bs7_A 9 SDVLKWYRRHCGEYT---------QYEQLFAQHDITGRALLRITD 44 (78)
T ss_dssp HHHHHHHHHHSGGGG---------GGHHHHHHTTCCHHHHTTCCH
T ss_pred HHHHHHHHHHhcCHH---------HHHHHHHHCCCCHHHHhhCCH
Confidence 5789999986 2322 134678777779988887643
No 62
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=23.11 E-value=31 Score=21.86 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHhh
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLLN 50 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~N 50 (130)
.+|..|+++.+-.. ..+.| .. -||-+|..|-.
T Consensus 23 edV~~WL~~~Gl~~----------Y~~~F-~~-IdG~~LL~Lt~ 54 (97)
T 2d8c_A 23 KKVADWLLENAMPE----------YCEPL-EH-FTGQDLINLTQ 54 (97)
T ss_dssp THHHHHHHHTTCTT----------TTTTT-TT-CCHHHHHTCCH
T ss_pred HHHHHHHHHcCCHH----------HHHHH-Hc-CCCHHHhcCCH
Confidence 58999999874322 12355 55 89999988754
No 63
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=21.44 E-value=58 Score=18.22 Aligned_cols=23 Identities=9% Similarity=0.338 Sum_probs=17.3
Q ss_pred hHHHHHHHHHhhcCCCccCCCCcc
Q psy6172 76 NIRIFIQICRNYFDIAENDLFEPS 99 (130)
Q Consensus 76 NI~~Fl~~c~~~~Gl~~~~lF~~~ 99 (130)
.+....+.|+ .+|++..++|...
T Consensus 49 ~~~~l~~ia~-~l~v~~~~l~~~~ 71 (73)
T 3omt_A 49 SLETLFDIAE-ALNVDVRELIVST 71 (73)
T ss_dssp CHHHHHHHHH-HHTSCGGGGBCCC
T ss_pred CHHHHHHHHH-HHCcCHHHHhcCC
Confidence 4566778888 5999988877654
No 64
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=21.31 E-value=57 Score=19.50 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCCCCCccccccccHhhHHHHccchHHHHHHh
Q psy6172 7 RECAAWLTRCGVLREDHKANWSEASMSDLALTLRDGVVICNLL 49 (130)
Q Consensus 7 ~e~~~WI~~~~~~~~~~~~~~~~~~~~~l~~~L~dGvvLC~L~ 49 (130)
.++.+|+++++ .+ .....|.+.=-||..|+.|-
T Consensus 13 ~~V~~WL~~lg-l~---------~Y~~~F~~~~idg~~Ll~Lt 45 (81)
T 3bq7_A 13 EEVAAWLEHLS-LC---------EYKDIFTRHDIRGSGLLHLE 45 (81)
T ss_dssp HHHHHHHHHTT-CG---------GGHHHHHHTTCCHHHHTTCC
T ss_pred HHHHHHHHHCC-CH---------HHHHHHHHcCCCHHHHCcCC
Confidence 57889999874 22 13467888878999887664
No 65
>2wcj_A General odorant-binding protein 1; transport protein, olfaction, transport, disulfide bond, insect pheremone, sensory transduction; HET: M21; 1.40A {Bombyx mori} PDB: 2wc6_A* 2wch_A* 2wck_A 2wcl_A* 2wcm_A* 2wc5_A*
Probab=20.82 E-value=81 Score=20.86 Aligned_cols=18 Identities=11% Similarity=0.272 Sum_probs=7.5
Q ss_pred hHHHHHHHHHhhcCCCcc
Q psy6172 76 NIRIFIQICRNYFDIAEN 93 (130)
Q Consensus 76 NI~~Fl~~c~~~~Gl~~~ 93 (130)
++..+.+.|++..|+++.
T Consensus 11 ~~~~~~~~C~~E~gvsee 28 (141)
T 2wcj_A 11 HFGKTLEECREESGLSVD 28 (141)
T ss_dssp HHGGGHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhhhCcCHH
Confidence 333344444444444443
Done!