RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6177
(870 letters)
***** No hits found ******
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.303 0.111 0.325
Gapped
Lambda K H
0.267 0.0428 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 10,468,726
Number of extensions: 549751
Number of successful extensions: 386
Number of sequences better than 10.0: 1
Number of HSP's gapped: 329
Number of HSP's successfully gapped: 6
Length of query: 870
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 768
Effective length of database: 3,853,851
Effective search space: 2959757568
Effective search space used: 2959757568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 62 (28.4 bits)