BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6185
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4P8|WIPI2_HUMAN WD repeat domain phosphoinositide-interacting protein 2 OS=Homo
sapiens GN=WIPI2 PE=1 SV=1
Length = 454
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 9 LLSLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
+ SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL
Sbjct: 42 VWSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKL 99
>sp|Q6AY57|WIPI2_RAT WD repeat domain phosphoinositide-interacting protein 2 OS=Rattus
norvegicus GN=Wipi2 PE=2 SV=1
Length = 445
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKL 81
>sp|Q5ZHN3|WIPI2_CHICK WD repeat domain phosphoinositide-interacting protein 2 OS=Gallus
gallus GN=WIPI2 PE=2 SV=1
Length = 436
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKL 81
>sp|Q80W47|WIPI2_MOUSE WD repeat domain phosphoinositide-interacting protein 2 OS=Mus
musculus GN=Wipi2 PE=1 SV=1
Length = 445
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKL 81
>sp|Q7ZWU5|WIPI2_XENLA WD repeat domain phosphoinositide-interacting protein 2
OS=Xenopus laevis GN=wipi2 PE=2 SV=1
Length = 435
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKL 81
>sp|Q8R3E3|WIPI1_MOUSE WD repeat domain phosphoinositide-interacting protein 1 OS=Mus
musculus GN=Wipi1 PE=1 SV=1
Length = 446
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL++GTK+GY+LFSL+S++ L+Q++ N DV IVERLFSSSLV VVS + PR++
Sbjct: 28 SLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDVYIVERLFSSSLVVVVSHTKPRQM 83
>sp|Q5MNZ9|WIPI1_HUMAN WD repeat domain phosphoinositide-interacting protein 1 OS=Homo
sapiens GN=WIPI1 PE=1 SV=3
Length = 446
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
SL+ GTK+GY+LFSL+S++ L+Q++ N DV IVERLFSSSLV VVS + PR++
Sbjct: 28 SLATGTKAGYKLFSLSSVEQLDQVHGSNEIPDVYIVERLFSSSLVVVVSHTKPRQM 83
>sp|Q1DKJ3|ATG18_COCIM Autophagy-related protein 18 OS=Coccidioides immitis (strain RS)
GN=ATG18 PE=3 SV=1
Length = 417
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+VGT G+R+F+ D + YE + ++ I+E LFS+SLVAV+ SPR+L
Sbjct: 15 LAVGTSKGFRIFT---TDPFGKSYETKEGNIAILEMLFSTSLVAVI--LSPRRL 63
>sp|Q6DCN1|WIPI1_XENLA WD repeat domain phosphoinositide-interacting protein 1
OS=Xenopus laevis GN=wipi1 PE=2 SV=1
Length = 433
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Query: 11 SLSVGTKSGYRLFSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVVSLSSPRKL 65
S+++G +SGY+L+SL++++ L+ ++E+ + +DV IVERLFSSSLV VVS + PR++
Sbjct: 24 SVAIGMRSGYKLYSLSNVERLDLVHESCEAKDVYIVERLFSSSLVVVVSHAKPRQM 79
>sp|A7EW77|ATG18_SCLS1 Autophagy-related protein 18 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=atg18 PE=3 SV=1
Length = 423
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+VGT G+R++ D +I+ E+V I+E LFS+SLVA+ SPR + + K
Sbjct: 13 LAVGTAKGFRIYH---TDPFSKIFTGDNENVTIIEMLFSTSLVAI--KQSPRHIVIQNTK 67
>sp|Q0CW30|ATG18_ASPTN Autophagy-related protein 18 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=atg18 PE=3 SV=1
Length = 414
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALI--LSPRRL 63
>sp|Q5BH53|ATG18_EMENI Autophagy-related protein 18 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=atg18 PE=3 SV=2
Length = 429
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE ++ I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKDGNIAIIEMLFSTSLVALI--LSPRRL 63
>sp|Q8X1F5|ATG18_PICPA Autophagy-related protein 18 OS=Komagataella pastoris GN=ATG18
PE=3 SV=1
Length = 543
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-----SSPRKL 65
+SVG +SGY++F++ + + S + IVE LFSSSLVA+V L SSPRKL
Sbjct: 34 VSVGYQSGYKIFNVEPFTKCLSLADTS---IGIVEMLFSSSLVAIVGLGELPDSSPRKL 89
>sp|A1DE24|ATG18_NEOFI Autophagy-related protein 18 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg18 PE=3
SV=1
Length = 429
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALI--LSPRRL 63
>sp|A2RAG5|ATG18_ASPNC Autophagy-related protein 18 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=atg18 PE=3 SV=1
Length = 415
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALI--LSPRRL 63
>sp|A6SJ85|ATG18_BOTFB Autophagy-related protein 18 OS=Botryotinia fuckeliana (strain
B05.10) GN=atg18 PE=3 SV=2
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+VGT G+R++ + +I+ E+V I+E LFS+SLVA+ SPR + + K
Sbjct: 13 LAVGTAKGFRIYH---TEPFSKIFTGDNENVTIIEMLFSTSLVAI--KQSPRHIVIQNTK 67
>sp|Q96U88|ATG18_NEUCR Autophagy-related protein 18 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-18 PE=3 SV=1
Length = 461
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+VGT G+R + D +I+ + + +V I+E LFS+SLVA++ +PR+L + K
Sbjct: 18 LAVGTSKGFRFYH---TDPFSKIFSSDEGNVSIIEMLFSTSLVALI--LTPRQLEIQNTK 72
Query: 72 NEEEEKK 78
++ ++
Sbjct: 73 VDQPSQR 79
>sp|Q2U6D5|ATG18_ASPOR Autophagy-related protein 18 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=atg18 PE=3 SV=1
Length = 413
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATAKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALI--LSPRRL 63
>sp|A1CBB8|ATG18_ASPCL Autophagy-related protein 18 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=atg18 PE=3 SV=1
Length = 417
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
L+V T G+R+F+ D + YE + + I+E LFS+SLVA++ SPR+L
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKEGHIAIIEMLFSTSLVALI--LSPRRL 63
>sp|Q2GV40|ATG18_CHAGB Autophagy-related protein 18 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=ATG18 PE=3 SV=1
Length = 394
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+V T G+R++ D +I+ + + +V I+E LFS+SLVA+V SPR L + K
Sbjct: 21 LAVATSRGFRIYH---TDPFSKIFNSDEGNVTIIEMLFSTSLVAMV--RSPRHLVIQNTK 75
>sp|Q5QA94|ATG18_PICAN Autophagy-related protein 18 OS=Pichia angusta GN=ATG18 PE=3 SV=1
Length = 525
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+SVG +GY++++ + Q Y S + IVE LFSSSL+A+V + SPR+L
Sbjct: 46 VSVGYSNGYKIYNC---EPFGQCYSKSDGSIGIVEMLFSSSLLAIVGMGEQHSLSPRRL 101
>sp|A5DHI9|ATG18_PICGU Autophagy-related protein 18 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279
/ NRRL Y-324) GN=ATG18 PE=3 SV=2
Length = 568
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVVSL-----SSPRKL 65
++VG GY +F+ N + Y++ E + IVE L+S+SLV VV+L SSPRKL
Sbjct: 36 IAVGNNKGYSIFTTNP---FTKCYDSPPGEAIGIVEMLYSTSLVVVVALGEETGSSPRKL 92
>sp|Q4WVD0|ATG18_ASPFU Autophagy-related protein 18 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg18
PE=3 SV=1
Length = 436
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 8 GLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKL 65
G +S T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L
Sbjct: 18 GSVSPPSATSKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALI--LSPRRL 70
>sp|A7KAM8|ATG18_PENCW Autophagy-related protein 18 OS=Penicillium chrysogenum (strain
ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg18
PE=3 SV=1
Length = 427
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+V T G+++F+ + + YE + ++ ++E LFS+SLVA++ SPR+L + K
Sbjct: 15 LAVATSKGFQIFT---TEPFAKSYEAKEGNIAVIEMLFSTSLVALI--LSPRRLQIQNTK 69
Query: 72 NE 73
+
Sbjct: 70 RQ 71
>sp|Q6C044|ATG18_YARLI Autophagy-related protein 18 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ATG18 PE=3 SV=1
Length = 400
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-----SSPRKL 65
+SVGT GY++++ D + + + + IVE LF +SL+AVV + +SPR+L
Sbjct: 17 VSVGTPQGYKIYNC---DPFGKCFSKADGGMGIVEMLFCTSLIAVVGMGDQPQNSPRRL 72
>sp|Q6CS21|ATG18_KLULA Autophagy-related protein 18 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ATG18 PE=3 SV=1
Length = 500
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+S+GT G+++F+ + + Y++ + IVE LFS+SL+AVV + SPR+L
Sbjct: 19 ISMGTSQGFKIFNC---EPFGRFYQDEEGGCGIVEMLFSTSLLAVVGMGDNPAMSPRRL 74
>sp|Q524W4|ATG18_MAGO7 Autophagy-related protein 18 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=ATG18 PE=3 SV=1
Length = 469
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L+VGT G+R++ + +I+ + +V I+E LFS+SLVA++ SPR L + K
Sbjct: 18 LAVGTSRGFRIYH---TEPFSKIFSSEDGNVSIIEMLFSTSLVALI--LSPRHLIIQNTK 72
>sp|Q9HDZ7|ATG18_SCHPO Autophagy-related protein 18 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=atg18 PE=3 SV=1
Length = 373
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
LS+GT GY++++ D + + Q IVE LFS+SLVA+V K++G
Sbjct: 15 LSIGTFDGYKIYN---CDPFGKCFHKIQGATSIVEMLFSTSLVALVE--------KDDGN 63
Query: 72 NEE 74
N +
Sbjct: 64 NRK 66
>sp|Q75F47|ATG18_ASHGO Autophagy-related protein 18 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG18
PE=3 SV=1
Length = 537
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+S+GT G ++F+ D + Y + IVE LFS+SL+AVV + SPR+L
Sbjct: 21 ISMGTSEGLKIFNC---DPFGRFYSDEDGGCGIVEMLFSTSLLAVVGIGDNPSMSPRRL 76
>sp|A3GFE3|ATG18_PICST Autophagy-related protein 18 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG18 PE=3 SV=2
Length = 563
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSL-----SSPRKL 65
++VG +GY++F N + Y+ +E V I+E L+ +SL+A+V+L SSPRKL
Sbjct: 53 IAVGLNNGYKIF--NCKPKFGKCYQIRKEESVGIIEMLYCTSLLAIVALGEEPGSSPRKL 110
>sp|Q0U2J8|ATG18_PHANO Autophagy-related protein 18 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG18 PE=3 SV=2
Length = 414
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71
L VGT +GYR+++ D + E+ + DV +E LFS+SLVA+ SPR L + K
Sbjct: 13 LGVGTSNGYRVYT---TDPFNKQSESREGDVSSLEMLFSTSLVALT--LSPRVLRIQNTK 67
Query: 72 NE 73
+
Sbjct: 68 GK 69
>sp|Q4P4N1|ATG18_USTMA Autophagy-related protein 18 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=ATG18 PE=3 SV=1
Length = 453
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS--------SPR 63
++VGT+ GY S+ + + ++Y N+ +VE LF +SLVA+V+ S SPR
Sbjct: 26 IAVGTRDGY---SITNCEPFGRVYTNNAGPTSLVEMLFCTSLVALVATSDTDPKSNASPR 82
Query: 64 KL 65
+L
Sbjct: 83 RL 84
>sp|A7TPY4|ATG18_VANPO Autophagy-related protein 18 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=ATG18 PE=3 SV=2
Length = 558
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKLT 66
+S+ T G FS+ + D + Y SQ++ IVE LFS+SL+AVV L S R+LT
Sbjct: 21 ISIATDDG---FSIYNCDPFGKFY--SQKNYSIVEMLFSTSLLAVVGLGDQPALSQRRLT 75
>sp|P43601|ATG18_YEAST Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATG18 PE=1 SV=1
Length = 500
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+S+GT G+++F+ + + Y IVE LFS+SL+A+V + SPR+L
Sbjct: 20 ISLGTSKGFKIFNC---EPFGKFYSEDSGGYAIVEMLFSTSLLALVGIGDQPALSPRRL 75
>sp|A7A258|ATG18_YEAS7 Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ATG18 PE=3 SV=1
Length = 500
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+S+GT G+++F+ + + Y IVE LFS+SL+A+V + SPR+L
Sbjct: 20 ISLGTSKGFKIFNC---EPFGKFYSEDSGGYAIVEMLFSTSLLALVGIGDQPALSPRRL 75
>sp|Q54NA2|ATG18_DICDI Autophagy-related protein 18 OS=Dictyostelium discoideum GN=atg18
PE=3 SV=1
Length = 372
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVV 57
++VGT GY++F NS D Y S +VE LFS+SLV++V
Sbjct: 23 IAVGTPEGYKIF--NS-DPYTLYYSQSNGGAGLVEMLFSTSLVSIV 65
>sp|P0CS28|ATG18_CRYNJ Autophagy-related protein 18 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG18 PE=3 SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS------SPRKL 65
++VG K GY + + + + N Q IVE LF +SLVA+V + SPRKL
Sbjct: 23 IAVGHKKGYTILNCDPFGKVHS--NNDQGATGIVEMLFCTSLVALVGAAENQPSNSPRKL 80
>sp|P0CS29|ATG18_CRYNB Autophagy-related protein 18 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG18 PE=3
SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS------SPRKL 65
++VG K GY + + + + N Q IVE LF +SLVA+V + SPRKL
Sbjct: 23 IAVGHKKGYTILNCDPFGKVHS--NNDQGATGIVEMLFCTSLVALVGAAENQPSNSPRKL 80
>sp|Q6BIL4|ATG18_DEBHA Autophagy-related protein 18 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ATG18 PE=3 SV=1
Length = 562
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSL-----SSPRKL 65
+++G K+GY++F N + Y+ E + +E L+ +SL+A+V L SSPRKL
Sbjct: 51 IALGLKNGYKIF--NCKPNFGKCYQFKKNESIGKIEMLYCTSLIAIVGLGEEVGSSPRKL 108
>sp|Q6FM63|ATG18_CANGA Autophagy-related protein 18 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ATG18 PE=3 SV=1
Length = 505
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKL 65
+S+GT +G+ +F+ + Y IVE LFS+SL+A+V + SPR+L
Sbjct: 20 ISMGTSNGFLIFNCAP---FGKFYSEDSGGYGIVEMLFSTSLLALVGIGDQPMLSPRRL 75
>sp|Q7MMR4|HEMH_VIBVY Ferrochelatase OS=Vibrio vulnificus (strain YJ016) GN=hemH PE=3
SV=2
Length = 319
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQE 40
S+P KG+ SL V T + FS++ ++TLE+I E QE
Sbjct: 253 SLPAKGIKSLDVITPA----FSVDCLETLEEISEQGQE 286
>sp|Q8DFM2|HEMH_VIBVU Ferrochelatase OS=Vibrio vulnificus (strain CMCP6) GN=hemH PE=3
SV=2
Length = 319
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQE 40
S+P KG+ SL V T + FS++ ++TLE+I E QE
Sbjct: 253 SLPAKGIKSLDVITPA----FSVDCLETLEEISEQGQE 286
>sp|A6S7C7|ATG2_BOTFB Autophagy-related protein 2 OS=Botryotinia fuckeliana (strain B05.10)
GN=atg2 PE=3 SV=1
Length = 2160
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 1 MCSVPLKGLLSLSVGTKSGYRLFS 24
M +P+ L++LSVGT S YR +S
Sbjct: 1201 MAQIPIPSLVALSVGTVSAYRNYS 1224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,973,244
Number of Sequences: 539616
Number of extensions: 860603
Number of successful extensions: 2353
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2315
Number of HSP's gapped (non-prelim): 48
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)