Query psy6185
Match_columns 79
No_of_seqs 101 out of 378
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 19:53:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6185.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6185hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2111|consensus 100.0 4.1E-30 8.9E-35 191.7 5.3 75 2-79 10-91 (346)
2 KOG2110|consensus 99.9 5.5E-24 1.2E-28 161.0 7.5 75 2-79 10-84 (391)
3 cd00200 WD40 WD40 domain, foun 96.5 0.057 1.2E-06 35.0 9.2 73 2-77 14-87 (289)
4 cd00200 WD40 WD40 domain, foun 96.2 0.09 2E-06 34.0 9.0 74 2-78 140-214 (289)
5 PTZ00421 coronin; Provisional 96.2 0.052 1.1E-06 42.8 8.8 71 2-73 173-247 (493)
6 KOG2048|consensus 96.2 0.014 3.1E-07 47.9 5.8 74 1-77 158-239 (691)
7 KOG0305|consensus 96.1 0.028 6.2E-07 44.7 7.0 76 3-79 307-384 (484)
8 PTZ00420 coronin; Provisional 96.0 0.084 1.8E-06 42.6 9.5 74 2-76 172-254 (568)
9 PTZ00421 coronin; Provisional 95.6 0.21 4.7E-06 39.3 10.1 74 2-78 130-205 (493)
10 PF08662 eIF2A: Eukaryotic tra 95.4 0.35 7.6E-06 33.2 9.6 71 2-78 64-140 (194)
11 KOG0271|consensus 95.3 0.086 1.9E-06 41.6 6.9 74 2-78 372-446 (480)
12 KOG0273|consensus 95.2 0.14 3.1E-06 41.0 7.9 71 2-76 240-311 (524)
13 KOG1407|consensus 95.0 0.095 2E-06 39.6 6.2 73 2-79 25-103 (313)
14 KOG2111|consensus 95.0 0.16 3.4E-06 39.0 7.4 65 2-69 186-254 (346)
15 KOG0316|consensus 95.0 0.093 2E-06 39.3 6.0 73 2-78 22-96 (307)
16 KOG0265|consensus 94.6 0.12 2.6E-06 39.5 5.8 75 1-77 94-169 (338)
17 KOG0265|consensus 94.3 0.28 6.2E-06 37.5 7.2 76 1-78 51-127 (338)
18 KOG0266|consensus 94.2 0.56 1.2E-05 36.1 8.9 71 1-74 250-321 (456)
19 KOG0276|consensus 94.1 0.15 3.2E-06 42.4 5.8 75 1-76 144-220 (794)
20 KOG2919|consensus 94.1 0.3 6.4E-06 38.0 7.1 70 3-75 55-145 (406)
21 KOG1963|consensus 93.6 0.042 9.1E-07 46.0 1.9 71 3-76 515-588 (792)
22 KOG0973|consensus 93.6 0.33 7.3E-06 41.5 7.1 74 1-76 73-164 (942)
23 PF08662 eIF2A: Eukaryotic tra 93.5 1.2 2.7E-05 30.5 8.8 73 2-78 105-185 (194)
24 KOG0318|consensus 93.1 0.92 2E-05 37.0 8.6 77 1-79 194-273 (603)
25 PTZ00420 coronin; Provisional 92.6 1.7 3.6E-05 35.2 9.5 73 2-78 130-204 (568)
26 KOG0278|consensus 92.5 0.14 3E-06 38.7 3.0 74 2-78 105-180 (334)
27 KOG0640|consensus 92.2 0.38 8.2E-06 37.4 5.1 71 1-76 220-296 (430)
28 TIGR03866 PQQ_ABC_repeats PQQ- 92.1 1.8 3.9E-05 29.2 8.0 72 3-79 212-287 (300)
29 KOG0302|consensus 90.3 1.8 3.8E-05 34.2 7.2 68 2-71 307-378 (440)
30 KOG0282|consensus 90.2 0.54 1.2E-05 37.7 4.4 73 2-78 263-337 (503)
31 KOG1273|consensus 90.0 2 4.3E-05 33.5 7.2 76 1-79 27-103 (405)
32 KOG1274|consensus 89.4 2.4 5.2E-05 36.4 7.8 73 1-76 100-173 (933)
33 KOG0647|consensus 88.5 4.2 9E-05 31.4 7.9 76 1-78 76-152 (347)
34 KOG0266|consensus 88.3 2.5 5.4E-05 32.6 6.8 77 1-78 338-416 (456)
35 PLN00181 protein SPA1-RELATED; 88.3 6.6 0.00014 32.1 9.5 67 2-72 622-691 (793)
36 TIGR03866 PQQ_ABC_repeats PQQ- 87.8 6.5 0.00014 26.5 8.9 73 2-77 119-193 (300)
37 KOG2321|consensus 87.7 1.1 2.4E-05 37.0 4.7 73 2-77 233-308 (703)
38 KOG1036|consensus 87.4 4.7 0.0001 30.9 7.6 67 2-72 59-125 (323)
39 PLN00181 protein SPA1-RELATED; 87.3 8.5 0.00018 31.5 9.6 75 2-78 488-570 (793)
40 KOG0272|consensus 86.7 3.2 7E-05 33.0 6.6 72 2-76 308-380 (459)
41 KOG0271|consensus 86.6 2.3 5.1E-05 33.8 5.7 65 1-78 119-194 (480)
42 KOG0274|consensus 86.4 1.9 4.2E-05 34.6 5.4 72 3-78 377-448 (537)
43 KOG0274|consensus 86.2 3.3 7.1E-05 33.3 6.6 64 12-77 221-285 (537)
44 PF14781 BBS2_N: Ciliary BBSom 86.1 2.7 5.8E-05 28.5 5.2 54 6-59 61-115 (136)
45 PF00400 WD40: WD domain, G-be 85.9 1.7 3.6E-05 21.4 3.3 22 2-23 16-38 (39)
46 smart00320 WD40 WD40 repeats. 85.8 1.5 3.3E-05 19.2 2.9 19 2-20 17-35 (40)
47 KOG0306|consensus 85.8 3.5 7.6E-05 35.1 6.7 65 1-70 512-579 (888)
48 KOG0284|consensus 85.4 3.5 7.5E-05 32.8 6.2 74 1-78 184-259 (464)
49 KOG0771|consensus 85.4 1.7 3.7E-05 34.1 4.4 70 2-77 149-221 (398)
50 PF10763 DUF2584: Protein of u 85.2 0.48 1E-05 29.5 1.2 34 12-48 24-60 (80)
51 KOG0306|consensus 83.1 1.9 4.2E-05 36.6 4.1 70 2-76 112-184 (888)
52 KOG0291|consensus 82.7 1.4 3.1E-05 37.4 3.2 32 2-33 685-719 (893)
53 KOG0303|consensus 82.5 4.3 9.3E-05 32.3 5.6 63 12-78 148-210 (472)
54 KOG0640|consensus 82.4 4.1 8.9E-05 31.8 5.4 71 1-73 116-204 (430)
55 PF00780 CNH: CNH domain; Int 81.7 13 0.00028 25.8 7.4 56 8-69 6-62 (275)
56 KOG0279|consensus 81.3 8 0.00017 29.5 6.5 72 1-74 109-183 (315)
57 KOG0319|consensus 81.2 6.3 0.00014 33.3 6.4 74 2-78 510-584 (775)
58 smart00036 CNH Domain found in 80.9 16 0.00035 26.8 8.0 60 7-69 11-71 (302)
59 KOG0264|consensus 80.5 8.2 0.00018 30.6 6.5 70 1-72 276-348 (422)
60 KOG0310|consensus 80.5 10 0.00022 30.5 7.1 76 2-79 73-149 (487)
61 KOG0289|consensus 80.1 10 0.00022 30.6 7.0 68 2-73 394-462 (506)
62 PF12894 Apc4_WD40: Anaphase-p 79.7 4.4 9.6E-05 22.3 3.6 24 2-25 16-40 (47)
63 KOG0291|consensus 78.5 13 0.00029 31.8 7.5 70 2-74 355-425 (893)
64 KOG0286|consensus 77.4 13 0.00029 28.6 6.7 75 2-77 234-309 (343)
65 KOG0318|consensus 77.3 20 0.00043 29.6 7.9 72 2-75 448-521 (603)
66 KOG0288|consensus 77.0 1.8 3.9E-05 34.4 2.0 73 3-78 225-298 (459)
67 KOG2110|consensus 75.7 15 0.00033 28.9 6.7 75 2-78 92-168 (391)
68 KOG2315|consensus 74.3 21 0.00045 29.4 7.3 71 2-78 275-351 (566)
69 PF14655 RAB3GAP2_N: Rab3 GTPa 74.2 2.3 4.9E-05 33.3 1.9 17 7-23 77-93 (415)
70 KOG2055|consensus 73.4 4.6 0.0001 32.6 3.5 67 7-74 397-470 (514)
71 KOG0272|consensus 72.9 17 0.00038 29.0 6.5 77 2-79 180-257 (459)
72 KOG0289|consensus 72.4 38 0.00082 27.4 8.3 75 2-77 308-383 (506)
73 KOG2919|consensus 70.2 16 0.00034 28.7 5.6 71 2-74 212-284 (406)
74 KOG0296|consensus 69.5 39 0.00083 26.7 7.6 74 3-79 154-228 (399)
75 KOG0263|consensus 68.6 31 0.00067 29.2 7.3 69 2-73 582-651 (707)
76 KOG0282|consensus 68.5 18 0.00039 29.3 5.8 75 1-78 303-379 (503)
77 KOG0643|consensus 67.8 52 0.0011 25.2 7.8 73 3-78 16-89 (327)
78 KOG0645|consensus 67.6 13 0.00029 28.3 4.7 25 2-26 110-135 (312)
79 KOG0264|consensus 67.2 17 0.00036 28.9 5.3 66 5-72 187-259 (422)
80 KOG0263|consensus 67.1 26 0.00057 29.5 6.6 72 2-76 498-570 (707)
81 KOG2048|consensus 67.0 55 0.0012 27.6 8.4 71 3-77 116-190 (691)
82 KOG1446|consensus 66.4 55 0.0012 25.1 7.8 72 2-77 192-268 (311)
83 PRK11028 6-phosphogluconolacto 65.5 47 0.001 23.7 7.7 72 2-73 84-158 (330)
84 KOG0303|consensus 64.9 14 0.0003 29.6 4.5 69 2-72 178-250 (472)
85 KOG1645|consensus 64.7 28 0.00061 27.9 6.1 56 18-77 369-425 (463)
86 KOG2106|consensus 64.5 46 0.001 27.5 7.4 24 2-25 452-476 (626)
87 KOG0294|consensus 64.0 31 0.00068 26.8 6.1 69 3-78 174-244 (362)
88 COG2319 FOG: WD40 repeat [Gene 63.5 41 0.00089 22.3 9.1 72 4-77 248-320 (466)
89 KOG1310|consensus 63.4 43 0.00094 28.1 7.1 70 1-72 54-126 (758)
90 KOG0316|consensus 62.8 28 0.00061 26.3 5.6 66 2-75 106-177 (307)
91 KOG1407|consensus 61.8 49 0.0011 25.3 6.7 57 1-58 193-250 (313)
92 PF03178 CPSF_A: CPSF A subuni 61.5 54 0.0012 23.6 6.8 61 9-74 42-118 (321)
93 KOG0299|consensus 59.7 53 0.0011 26.6 6.9 64 9-77 298-362 (479)
94 KOG0279|consensus 59.6 46 0.00099 25.5 6.2 72 2-78 197-269 (315)
95 KOG2445|consensus 59.2 7.7 0.00017 30.1 2.1 18 10-27 240-257 (361)
96 KOG0278|consensus 58.3 13 0.00029 28.3 3.2 30 1-30 271-301 (334)
97 KOG1539|consensus 58.1 56 0.0012 28.4 7.1 66 12-78 128-197 (910)
98 KOG2079|consensus 57.8 23 0.0005 31.5 4.9 43 2-44 135-178 (1206)
99 KOG2394|consensus 57.3 75 0.0016 26.5 7.5 73 3-78 296-369 (636)
100 KOG0284|consensus 56.3 35 0.00075 27.4 5.3 68 3-73 102-170 (464)
101 PF14976 FAM72: FAM72 protein 56.3 11 0.00024 26.0 2.3 56 7-69 70-126 (150)
102 PF04053 Coatomer_WDAD: Coatom 56.3 97 0.0021 24.4 8.0 75 2-79 37-142 (443)
103 KOG2096|consensus 55.9 75 0.0016 25.1 7.0 21 3-23 138-158 (420)
104 PF02239 Cytochrom_D1: Cytochr 55.8 88 0.0019 23.7 8.1 74 3-79 42-116 (369)
105 PF11715 Nup160: Nucleoporin N 55.6 74 0.0016 24.8 7.1 26 50-77 229-254 (547)
106 KOG1036|consensus 55.0 27 0.00058 26.9 4.4 74 1-79 181-270 (323)
107 KOG0319|consensus 54.9 58 0.0013 27.8 6.6 59 5-68 332-392 (775)
108 KOG0267|consensus 54.3 21 0.00045 30.5 4.0 73 2-77 159-232 (825)
109 KOG0315|consensus 53.9 97 0.0021 23.6 7.4 72 4-77 222-294 (311)
110 KOG0639|consensus 53.9 19 0.0004 29.9 3.6 71 3-77 515-587 (705)
111 PF12341 DUF3639: Protein of u 53.8 16 0.00035 18.2 2.1 15 9-23 11-26 (27)
112 KOG2106|consensus 53.7 78 0.0017 26.3 7.0 66 1-71 250-316 (626)
113 KOG1517|consensus 52.5 61 0.0013 29.2 6.5 72 6-79 1120-1203(1387)
114 KOG4547|consensus 52.4 1.1E+02 0.0023 25.3 7.6 71 2-77 107-178 (541)
115 KOG0308|consensus 51.6 1.1E+02 0.0023 26.1 7.6 73 2-77 176-249 (735)
116 TIGR02658 TTQ_MADH_Hv methylam 51.2 1.1E+02 0.0024 23.4 8.1 75 5-79 53-144 (352)
117 KOG2314|consensus 51.2 77 0.0017 26.6 6.7 71 2-75 215-294 (698)
118 KOG1188|consensus 51.0 49 0.0011 25.9 5.3 69 10-79 41-110 (376)
119 PRK11028 6-phosphogluconolacto 50.9 88 0.0019 22.3 8.6 70 2-72 39-111 (330)
120 KOG0281|consensus 50.1 37 0.0008 27.1 4.6 59 12-75 334-392 (499)
121 KOG0305|consensus 49.7 1.1E+02 0.0023 24.8 7.2 66 10-78 189-254 (484)
122 KOG1539|consensus 49.2 64 0.0014 28.0 6.1 65 2-69 249-316 (910)
123 KOG1274|consensus 49.1 99 0.0021 27.1 7.2 71 3-77 194-274 (933)
124 KOG0295|consensus 48.5 86 0.0019 24.8 6.3 75 3-78 241-329 (406)
125 TIGR02276 beta_rpt_yvtn 40-res 47.2 36 0.00078 16.7 3.5 19 60-78 11-29 (42)
126 KOG0275|consensus 46.6 22 0.00048 28.1 2.9 71 2-75 311-382 (508)
127 KOG2114|consensus 46.2 42 0.00092 29.2 4.6 64 5-72 31-101 (933)
128 KOG4532|consensus 46.1 16 0.00036 28.0 2.1 45 2-46 208-257 (344)
129 KOG0281|consensus 43.6 45 0.00097 26.6 4.1 60 13-77 211-271 (499)
130 KOG0269|consensus 43.2 85 0.0018 27.1 5.9 72 1-72 224-297 (839)
131 PF13645 YkuD_2: L,D-transpept 42.7 62 0.0014 22.7 4.4 30 48-77 31-63 (176)
132 PHA00692 hypothetical protein 42.7 16 0.00035 21.8 1.3 24 1-24 22-45 (74)
133 KOG3881|consensus 42.3 94 0.002 24.7 5.7 74 2-77 252-326 (412)
134 PF02960 K1: K1 glycoprotein; 41.7 81 0.0017 21.1 4.6 49 2-53 16-64 (130)
135 KOG0649|consensus 40.8 30 0.00064 26.4 2.7 19 60-78 175-193 (325)
136 KOG0315|consensus 40.7 1.6E+02 0.0035 22.4 6.7 68 3-72 46-114 (311)
137 KOG1272|consensus 40.7 81 0.0018 25.8 5.2 65 5-72 259-324 (545)
138 KOG1446|consensus 40.0 1.7E+02 0.0037 22.5 8.7 54 2-56 19-73 (311)
139 KOG0292|consensus 39.9 1.1E+02 0.0024 27.3 6.1 72 2-76 14-86 (1202)
140 KOG4283|consensus 39.7 1.8E+02 0.0039 22.8 6.8 60 12-73 161-221 (397)
141 KOG0300|consensus 39.5 1.1E+02 0.0024 24.2 5.7 57 13-72 331-387 (481)
142 KOG0301|consensus 38.7 2.5E+02 0.0053 24.1 7.9 65 3-71 185-249 (745)
143 PF13285 DUF4073: Domain of un 38.4 79 0.0017 21.9 4.3 59 15-78 15-78 (158)
144 PRK03629 tolB translocation pr 37.6 1.8E+02 0.004 22.1 8.2 72 2-74 291-366 (429)
145 PF00780 CNH: CNH domain; Int 37.3 1.4E+02 0.003 20.6 6.3 19 9-27 148-166 (275)
146 KOG0283|consensus 37.1 1.1E+02 0.0023 26.1 5.6 71 3-77 457-538 (712)
147 PF08576 DUF1764: Eukaryotic p 36.9 17 0.00037 22.8 0.8 9 16-24 69-77 (102)
148 KOG2055|consensus 36.4 86 0.0019 25.6 4.8 58 2-59 262-323 (514)
149 KOG1523|consensus 35.8 1.3E+02 0.0028 23.5 5.5 58 1-58 14-74 (361)
150 KOG4328|consensus 34.5 1.6E+02 0.0035 24.0 6.0 74 3-78 375-457 (498)
151 KOG0307|consensus 34.2 43 0.00092 29.6 2.9 75 2-78 121-199 (1049)
152 KOG0310|consensus 34.2 2.6E+02 0.0056 22.8 7.8 58 7-78 121-192 (487)
153 KOG0292|consensus 34.1 2.4E+02 0.0052 25.3 7.2 72 2-77 56-129 (1202)
154 KOG0308|consensus 33.4 44 0.00095 28.3 2.8 26 54-79 184-209 (735)
155 KOG0273|consensus 33.2 2.7E+02 0.0059 22.8 7.7 62 9-73 330-391 (524)
156 PF01376 Enterotoxin_b: Heat-l 32.9 41 0.00088 21.4 2.0 17 63-79 83-99 (102)
157 KOG1408|consensus 32.8 1.9E+02 0.0042 25.3 6.5 63 12-77 612-677 (1080)
158 KOG1524|consensus 32.7 2.9E+02 0.0062 23.4 7.3 25 1-25 108-133 (737)
159 KOG2727|consensus 32.6 34 0.00074 30.3 2.1 19 7-25 98-116 (1244)
160 PF14727 PHTB1_N: PTHB1 N-term 31.2 2.6E+02 0.0057 22.0 8.1 61 7-70 35-104 (418)
161 KOG4640|consensus 30.9 41 0.00089 28.2 2.3 23 2-24 67-90 (665)
162 KOG0641|consensus 30.4 2.4E+02 0.0052 21.4 6.0 36 40-75 181-216 (350)
163 PF03646 FlaG: FlaG protein; 29.7 49 0.0011 20.4 2.1 17 63-79 68-84 (107)
164 PF12234 Rav1p_C: RAVE protein 28.4 98 0.0021 25.8 4.0 25 50-75 39-63 (631)
165 PRK07738 flagellar protein Fla 28.2 60 0.0013 21.3 2.3 20 60-79 74-93 (117)
166 PRK08868 flagellar protein Fla 27.6 59 0.0013 22.2 2.3 19 61-79 100-118 (144)
167 PRK08452 flagellar protein Fla 27.4 61 0.0013 21.5 2.2 18 62-79 83-100 (124)
168 KOG2096|consensus 27.2 3.1E+02 0.0067 21.8 6.3 27 2-28 91-118 (420)
169 PF08596 Lgl_C: Lethal giant l 26.5 1.5E+02 0.0033 22.8 4.6 61 9-69 226-288 (395)
170 KOG0299|consensus 26.3 2.7E+02 0.0058 22.7 6.0 68 2-73 207-276 (479)
171 KOG0295|consensus 25.4 3.5E+02 0.0076 21.5 7.0 66 9-77 305-370 (406)
172 KOG1963|consensus 24.8 3.5E+02 0.0077 23.4 6.7 73 4-77 23-96 (792)
173 PF13584 BatD: Oxygen toleranc 23.9 1.5E+02 0.0032 22.8 4.1 55 16-75 312-369 (484)
174 PF11974 MG1: Alpha-2-macroglo 23.9 1.8E+02 0.004 17.8 5.8 39 40-78 2-46 (97)
175 KOG0275|consensus 23.5 58 0.0013 25.8 1.8 73 2-77 218-299 (508)
176 KOG0772|consensus 23.4 1.6E+02 0.0035 24.5 4.4 67 3-72 323-395 (641)
177 KOG0285|consensus 23.3 1.4E+02 0.003 23.9 3.9 69 1-74 323-392 (460)
178 PF14779 BBS1: Ciliary BBSome 23.3 71 0.0015 23.7 2.2 18 9-27 195-212 (257)
179 KOG0302|consensus 23.2 4E+02 0.0086 21.4 7.1 64 6-72 268-333 (440)
180 KOG2139|consensus 22.7 87 0.0019 25.0 2.7 31 2-32 103-134 (445)
181 KOG3881|consensus 22.6 4E+02 0.0087 21.3 6.9 72 2-76 207-282 (412)
182 KOG0296|consensus 22.4 1.1E+02 0.0025 24.1 3.2 69 2-72 238-317 (399)
183 KOG0307|consensus 22.2 2.5E+02 0.0054 25.1 5.4 76 2-79 211-292 (1049)
184 KOG1832|consensus 21.9 1.1E+02 0.0023 27.6 3.2 26 2-27 1106-1132(1516)
185 KOG2139|consensus 21.7 4.3E+02 0.0093 21.2 6.4 75 2-76 145-231 (445)
186 PF12657 TFIIIC_delta: Transcr 21.4 1.1E+02 0.0023 20.5 2.6 21 2-23 9-29 (173)
187 PF15390 DUF4613: Domain of un 21.2 43 0.00093 28.1 0.7 20 39-58 634-653 (671)
188 KOG1524|consensus 20.8 83 0.0018 26.4 2.3 22 2-23 261-282 (737)
189 KOG0777|consensus 20.8 12 0.00026 28.2 -2.3 11 44-54 63-73 (322)
190 COG3737 Uncharacterized conser 20.7 83 0.0018 21.1 1.9 22 38-59 22-43 (127)
191 KOG0294|consensus 20.7 4.2E+02 0.0091 20.8 6.6 69 2-73 213-283 (362)
192 KOG0650|consensus 20.6 1.1E+02 0.0024 25.9 2.9 27 1-27 570-596 (733)
193 COG2828 Uncharacterized protei 20.6 77 0.0017 24.8 2.0 27 51-77 96-133 (378)
194 KOG2444|consensus 20.1 3.6E+02 0.0079 19.9 5.3 61 11-77 72-138 (238)
No 1
>KOG2111|consensus
Probab=99.96 E-value=4.1e-30 Score=191.71 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=66.7
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeec--cCCCeEEEEEecccceEEEecc-----CCCcEEEEEeCCCCe
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYEN--SQEDVCIVERLFSSSLVAVVSL-----SSPRKLTKEEGKNEE 74 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~--~~g~v~ivEmLf~snLlalVg~-----~~prkL~I~d~~~~~ 74 (79)
.++||||+|||+|||++|||||||+| +++..++ ..+|+++||||||||++|+||| ++||||+||||.+++
T Consensus 10 svs~NQD~ScFava~~~Gfriyn~~P---~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~ 86 (346)
T KOG2111|consen 10 SVSFNQDHSCFAVATDTGFRIYNCDP---FKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKER 86 (346)
T ss_pred EEEEccCCceEEEEecCceEEEecCc---hhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCc
Confidence 47999999999999999999999655 6665544 4677999999999999999998 899999999999999
Q ss_pred EEeeC
Q psy6185 75 EEKKI 79 (79)
Q Consensus 75 ~I~~~ 79 (79)
+|.|+
T Consensus 87 ~i~el 91 (346)
T KOG2111|consen 87 CIIEL 91 (346)
T ss_pred EEEEE
Confidence 99874
No 2
>KOG2110|consensus
Probab=99.90 E-value=5.5e-24 Score=161.05 Aligned_cols=75 Identities=41% Similarity=0.525 Sum_probs=69.7
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
+.+||||.+++++|+++||++|+++| +++++..+.+++.||||||+|||+|+|+...||+|+++|+||+.+|||+
T Consensus 10 ~~~~Nqd~~~lsvGs~~Gyk~~~~~~---~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~ 84 (391)
T KOG2110|consen 10 FIGFNQDSTLLSVGSKDGYKIFSCSP---FEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEI 84 (391)
T ss_pred eeeeccceeEEEccCCCceeEEecCc---hHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEE
Confidence 56799999999999999999999655 5557888899999999999999999999999999999999999999996
No 3
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.51 E-value=0.057 Score=34.98 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=45.7
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
++.|++|+..+++|..+ -.++|+.++-.+ ........+.+.-+...-..++++..+ ..+.+.|||..+++.+.
T Consensus 14 ~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~--~~~~i~i~~~~~~~~~~ 87 (289)
T cd00200 14 CVAFSPDGKLLATGSGDGTIKVWDLETGEL-LRTLKGHTGPVRDVAASADGTYLASGS--SDKTIRLWDLETGECVR 87 (289)
T ss_pred EEEEcCCCCEEEEeecCcEEEEEEeeCCCc-EEEEecCCcceeEEEECCCCCEEEEEc--CCCeEEEEEcCcccceE
Confidence 78999999999999855 688998654221 122233334443333333344776664 36899999988755443
No 4
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.24 E-value=0.09 Score=34.01 Aligned_cols=74 Identities=7% Similarity=-0.097 Sum_probs=48.5
Q ss_pred eeeccCCCCEEEEEc-CCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGT-KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt-~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
++.|++++.-+++|. +.-.++|+.+.-.+ ...+....+.+.-+...-..+.+++.+. .+.+.+||.++++.+.+
T Consensus 140 ~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~i~d~~~~~~~~~ 214 (289)
T cd00200 140 SVAFSPDGTFVASSSQDGTIKLWDLRTGKC-VATLTGHTGEVNSVAFSPDGEKLLSSSS--DGTIKLWDLSTGKCLGT 214 (289)
T ss_pred EEEEcCcCCEEEEEcCCCcEEEEEcccccc-ceeEecCccccceEEECCCcCEEEEecC--CCcEEEEECCCCceecc
Confidence 678999988899988 66789998653222 2233333345555554444447776654 67899999987766543
No 5
>PTZ00421 coronin; Provisional
Probab=96.16 E-value=0.052 Score=42.76 Aligned_cols=71 Identities=8% Similarity=-0.070 Sum_probs=44.4
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCC-eEEEEEecccceEEEecc--CCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQED-VCIVERLFSSSLVAVVSL--SSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~-v~ivEmLf~snLlalVg~--~~prkL~I~d~~~~ 73 (79)
+++||+|+.-|++|..+| .+||+...-.+. ..+....+. ...+......++++.+|. ...|.++|||..+.
T Consensus 173 sla~spdG~lLatgs~Dg~IrIwD~rsg~~v-~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~ 247 (493)
T PTZ00421 173 SLEWNLDGSLLCTTSKDKKLNIIDPRDGTIV-SSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKM 247 (493)
T ss_pred EEEEECCCCEEEEecCCCEEEEEECCCCcEE-EEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCC
Confidence 689999999999988875 789985432221 112222222 223334445567766663 34589999998653
No 6
>KOG2048|consensus
Probab=96.15 E-value=0.014 Score=47.90 Aligned_cols=74 Identities=19% Similarity=0.111 Sum_probs=50.5
Q ss_pred CeeeccCCCCEEEEEcCCc-eEEEecCCcchhhee---eec--cCCCeEE--EEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 1 MCSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQI---YEN--SQEDVCI--VERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~---~~~--~~g~v~i--vEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+|++||.|++-++.|+.+| .|||+....+.+..+ +.+ ...++.+ |--| |++.| +++-|..+|++||.+.
T Consensus 158 Lslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI--~sgDS~G~V~FWd~~~ 234 (691)
T KOG2048|consen 158 LSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTI--ASGDSAGTVTFWDSIF 234 (691)
T ss_pred EEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe-ecCcE--EEecCCceEEEEcccC
Confidence 4899999999999999999 999986543322211 111 1123322 3334 77777 4567889999999998
Q ss_pred CeEEe
Q psy6185 73 EEEEK 77 (79)
Q Consensus 73 ~~~I~ 77 (79)
++.|.
T Consensus 235 gTLiq 239 (691)
T KOG2048|consen 235 GTLIQ 239 (691)
T ss_pred cchhh
Confidence 87653
No 7
>KOG0305|consensus
Probab=96.07 E-value=0.028 Score=44.70 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=57.0
Q ss_pred eeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCe-EEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 3 SVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDV-CIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v-~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
+.||.|+.-+|.|-.+ ...||+....+| ...+....+.| +++===+..||||.=||.+-|.+++||..++..|-.|
T Consensus 307 Lkws~d~~~lASGgnDN~~~Iwd~~~~~p-~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v 384 (484)
T KOG0305|consen 307 LKWSPDGNQLASGGNDNVVFIWDGLSPEP-KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV 384 (484)
T ss_pred eEECCCCCeeccCCCccceEeccCCCccc-cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc
Confidence 6899999999988766 899998633344 23444444554 3444457899999988999999999999998877543
No 8
>PTZ00420 coronin; Provisional
Probab=96.00 E-value=0.084 Score=42.56 Aligned_cols=74 Identities=7% Similarity=-0.116 Sum_probs=46.0
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEe-----cccceEEEecc--CCCcEEEEEeCCC-
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERL-----FSSSLVAVVSL--SSPRKLTKEEGKN- 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmL-----f~snLlalVg~--~~prkL~I~d~~~- 72 (79)
+++|++|++-|+++..+ -.+||+...-... ..+....|++...... ...++++-+|. .+.|.++|||.++
T Consensus 172 SlswspdG~lLat~s~D~~IrIwD~Rsg~~i-~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~ 250 (568)
T PTZ00420 172 SLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA-SSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT 250 (568)
T ss_pred EEEECCCCCEEEEEecCCEEEEEECCCCcEE-EEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC
Confidence 68999999999988766 4999986442221 2233344554332221 23456766663 2347999999874
Q ss_pred CeEE
Q psy6185 73 EEEE 76 (79)
Q Consensus 73 ~~~I 76 (79)
++.+
T Consensus 251 ~~pl 254 (568)
T PTZ00420 251 TSAL 254 (568)
T ss_pred CCce
Confidence 4443
No 9
>PTZ00421 coronin; Provisional
Probab=95.58 E-value=0.21 Score=39.32 Aligned_cols=74 Identities=9% Similarity=0.076 Sum_probs=48.1
Q ss_pred eeeccCCC-CEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGL-LSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~-sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
++.|+++. .-++.|..+ -.+||+++.-.+ ...+....+.+.-+..-...+++|..+ .-++++|||.++++.+.+
T Consensus 130 ~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~-~~~l~~h~~~V~sla~spdG~lLatgs--~Dg~IrIwD~rsg~~v~t 205 (493)
T PTZ00421 130 IVSFHPSAMNVLASAGADMVVNVWDVERGKA-VEVIKCHSDQITSLEWNLDGSLLCTTS--KDKKLNIIDPRDGTIVSS 205 (493)
T ss_pred EEEeCcCCCCEEEEEeCCCEEEEEECCCCeE-EEEEcCCCCceEEEEEECCCCEEEEec--CCCEEEEEECCCCcEEEE
Confidence 67899986 466666655 489998654222 222333445666666555667776543 457999999998877654
No 10
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=95.38 E-value=0.35 Score=33.24 Aligned_cols=71 Identities=7% Similarity=0.008 Sum_probs=47.4
Q ss_pred eeeccCCCCEEEEEc---CCceEEEecCCcchhheeeeccCCCeEEEEEecc--cceEEEecc-CCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLSVGT---KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFS--SSLVAVVSL-SSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt---~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~--snLlalVg~-~~prkL~I~d~~~~~~ 75 (79)
.++|++++.-|++.. +.-..+|+.+ . +..+.-..+... .+.|+ -+++|+.|. ..+..|.+||.++.+.
T Consensus 64 ~~~WsP~g~~favi~g~~~~~v~lyd~~-~---~~i~~~~~~~~n--~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~ 137 (194)
T PF08662_consen 64 DVAWSPNGNEFAVIYGSMPAKVTLYDVK-G---KKIFSFGTQPRN--TISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK 137 (194)
T ss_pred EEEECcCCCEEEEEEccCCcccEEEcCc-c---cEeEeecCCCce--EEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence 578999999998764 2358899864 2 223332233333 34454 378888773 4457899999998888
Q ss_pred Eee
Q psy6185 76 EKK 78 (79)
Q Consensus 76 I~~ 78 (79)
|.+
T Consensus 138 i~~ 140 (194)
T PF08662_consen 138 IST 140 (194)
T ss_pred eec
Confidence 865
No 11
>KOG0271|consensus
Probab=95.31 E-value=0.086 Score=41.58 Aligned_cols=74 Identities=12% Similarity=0.018 Sum_probs=59.2
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.++|.+|.-++|.|.-+ -.|+++-. ..++--.|+...+.|..|.|--.|-|| |++.....|++||.++++.-.+
T Consensus 372 ~V~fSPd~r~IASaSFDkSVkLW~g~-tGk~lasfRGHv~~VYqvawsaDsRLl--VS~SkDsTLKvw~V~tkKl~~D 446 (480)
T KOG0271|consen 372 HVSFSPDGRYIASASFDKSVKLWDGR-TGKFLASFRGHVAAVYQVAWSADSRLL--VSGSKDSTLKVWDVRTKKLKQD 446 (480)
T ss_pred eEEECCCccEEEEeecccceeeeeCC-CcchhhhhhhccceeEEEEeccCccEE--EEcCCCceEEEEEeeeeeeccc
Confidence 57899999999988766 99999732 234444566678999999998888887 8888889999999999876543
No 12
>KOG0273|consensus
Probab=95.17 E-value=0.14 Score=40.99 Aligned_cols=71 Identities=7% Similarity=-0.003 Sum_probs=54.2
Q ss_pred eeeccCCCCEEEEEcCCce-EEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
|++||-|++-++.|..+|+ |||+.+. .+-..+....|+|.-+.-=-+-++|+- +-..++..|||-+++..-
T Consensus 240 ~L~Wn~~G~~LatG~~~G~~riw~~~G--~l~~tl~~HkgPI~slKWnk~G~yilS--~~vD~ttilwd~~~g~~~ 311 (524)
T KOG0273|consen 240 SLDWNNDGTLLATGSEDGEARIWNKDG--NLISTLGQHKGPIFSLKWNKKGTYILS--GGVDGTTILWDAHTGTVK 311 (524)
T ss_pred eEEecCCCCeEEEeecCcEEEEEecCc--hhhhhhhccCCceEEEEEcCCCCEEEe--ccCCccEEEEeccCceEE
Confidence 7899999999999999997 7887532 233455667788888888777777743 345578899999887653
No 13
>KOG1407|consensus
Probab=95.03 E-value=0.095 Score=39.56 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=50.2
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeec-cCCCeEEEEEe----cccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYEN-SQEDVCIVERL----FSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~-~~g~v~ivEmL----f~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
.+.||-|++-++.|.-++ .+|||+++ .+...+. -.|.-+.||-| -.++++|.+ .+-+++++||..+++.
T Consensus 25 Sv~wn~~g~~lasgs~dktv~v~n~e~---~r~~~~~~~~gh~~svdql~w~~~~~d~~ata--s~dk~ir~wd~r~~k~ 99 (313)
T KOG1407|consen 25 SVAWNCDGTKLASGSFDKTVSVWNLER---DRFRKELVYRGHTDSVDQLCWDPKHPDLFATA--SGDKTIRIWDIRSGKC 99 (313)
T ss_pred EEEEcccCceeeecccCCceEEEEecc---hhhhhhhcccCCCcchhhheeCCCCCcceEEe--cCCceEEEEEeccCcE
Confidence 578999999999998884 68898554 3332221 11233334433 246788877 4568999999999998
Q ss_pred EeeC
Q psy6185 76 EKKI 79 (79)
Q Consensus 76 I~~~ 79 (79)
+.+|
T Consensus 100 ~~~i 103 (313)
T KOG1407|consen 100 TARI 103 (313)
T ss_pred EEEe
Confidence 8765
No 14
>KOG2111|consensus
Probab=94.99 E-value=0.16 Score=38.97 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=46.9
Q ss_pred eeeccCCCCEEEEEcCCc--eEEEecCCcchhheeeeccCCCeEEEEEecccc--eEEEeccCCCcEEEEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTKEE 69 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G--frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn--LlalVg~~~prkL~I~d 69 (79)
|++.|||++-+|.|...| .||||...=+++.+ +++....--|-+|=|+.| +||.- .+-..|.|+.
T Consensus 186 cv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E-~RRG~d~A~iy~iaFSp~~s~Lavs--SdKgTlHiF~ 254 (346)
T KOG2111|consen 186 CVALNLQGTLVATASTKGTLIRIFDTEDGTLLQE-LRRGVDRADIYCIAFSPNSSWLAVS--SDKGTLHIFS 254 (346)
T ss_pred EEEEcCCccEEEEeccCcEEEEEEEcCCCcEeee-eecCCchheEEEEEeCCCccEEEEE--cCCCeEEEEE
Confidence 899999999999999998 89998543233333 456666777888988865 45544 4556666654
No 15
>KOG0316|consensus
Probab=94.97 E-value=0.093 Score=39.30 Aligned_cols=73 Identities=12% Similarity=0.109 Sum_probs=50.9
Q ss_pred eeeccCCCC-EEEEEcCCceEEEecCCc-chhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLL-SLSVGTKSGYRLFSLNSI-DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~s-c~~vgt~~GfrIyn~~~~-d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
-+.||-|+. |++||.+.=.|+|| |. ..+-+.|+.....|-=+..-+..+=+|--| ..|-+.+||..+++.+.+
T Consensus 22 avryN~dGnY~ltcGsdrtvrLWN--p~rg~liktYsghG~EVlD~~~s~Dnskf~s~G--gDk~v~vwDV~TGkv~Rr 96 (307)
T KOG0316|consen 22 AVRYNVDGNYCLTCGSDRTVRLWN--PLRGALIKTYSGHGHEVLDAALSSDNSKFASCG--GDKAVQVWDVNTGKVDRR 96 (307)
T ss_pred EEEEccCCCEEEEcCCCceEEeec--ccccceeeeecCCCceeeeccccccccccccCC--CCceEEEEEcccCeeeee
Confidence 368999976 99999999999998 53 334445665544444444445555554444 347899999999998864
No 16
>KOG0265|consensus
Probab=94.56 E-value=0.12 Score=39.49 Aligned_cols=75 Identities=17% Similarity=0.023 Sum_probs=50.1
Q ss_pred CeeeccCCCCE-EEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 1 MCSVPLKGLLS-LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 1 ~~~~fNQD~sc-~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
|.+-|+.|++- ++||++.=++.|+.+. .+....+..+.+=+..+. --|-++.-+-++.+.+.+++||-+++..|.
T Consensus 94 M~l~~~~d~s~i~S~gtDk~v~~wD~~t-G~~~rk~k~h~~~vNs~~-p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~ 169 (338)
T KOG0265|consen 94 MELHGMRDGSHILSCGTDKTVRGWDAET-GKRIRKHKGHTSFVNSLD-PSRRGPQLVCSGSDDGTLKLWDIRKKEAIK 169 (338)
T ss_pred EeeeeccCCCEEEEecCCceEEEEeccc-ceeeehhccccceeeecC-ccccCCeEEEecCCCceEEEEeecccchhh
Confidence 46788999885 7899999999998532 221122222333333433 345566666777889999999999877664
No 17
>KOG0265|consensus
Probab=94.25 E-value=0.28 Score=37.47 Aligned_cols=76 Identities=8% Similarity=0.025 Sum_probs=48.4
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+++.|++|++||+.|-.+ -.-+||... -++..-....-.=++.|.=|.++==.+++..+-++|..||..+++.|.+
T Consensus 51 ~~~~F~P~gs~~aSgG~Dr~I~LWnv~g--dceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 51 YTIKFHPDGSCFASGGSDRAIVLWNVYG--DCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRK 127 (338)
T ss_pred EEEEECCCCCeEeecCCcceEEEEeccc--cccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeeh
Confidence 367899999999987555 666776322 1111111122333555655555444556667779999999999998764
No 18
>KOG0266|consensus
Probab=94.18 E-value=0.56 Score=36.11 Aligned_cols=71 Identities=7% Similarity=0.003 Sum_probs=52.4
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
.|++||.++.-++.|..+ =.|||++.. ..+...+..+.+++..+-.=-.-++++.- ..-+.++|||..++.
T Consensus 250 ~~~~f~p~g~~i~Sgs~D~tvriWd~~~-~~~~~~l~~hs~~is~~~f~~d~~~l~s~--s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 250 TSVAFSPDGNLLVSGSDDGTVRIWDVRT-GECVRKLKGHSDGISGLAFSPDGNLLVSA--SYDGTIRVWDLETGS 321 (456)
T ss_pred EEEEecCCCCEEEEecCCCcEEEEeccC-CeEEEeeeccCCceEEEEECCCCCEEEEc--CCCccEEEEECCCCc
Confidence 478999999777777666 699999764 33445566677788877666666776543 446899999999887
No 19
>KOG0276|consensus
Probab=94.12 E-value=0.15 Score=42.39 Aligned_cols=75 Identities=12% Similarity=0.015 Sum_probs=54.4
Q ss_pred CeeeccCC-CCEE-EEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 1 MCSVPLKG-LLSL-SVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 1 ~~~~fNQD-~sc~-~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
|++.||+- .+-| ++.++.-.+||++..-+| ...++.+..||.-|.-+..--==-++++.+.+.++|||.++++.|
T Consensus 144 Mqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~-nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV 220 (794)
T KOG0276|consen 144 MQVAFNPKDPNTFASASLDRTVKVWSLGSPHP-NFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV 220 (794)
T ss_pred EEEEecCCCccceeeeeccccEEEEEcCCCCC-ceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence 68899974 4445 455677899998755343 335566678888888887664444567788899999999988765
No 20
>KOG2919|consensus
Probab=94.07 E-value=0.3 Score=37.96 Aligned_cols=70 Identities=13% Similarity=0.074 Sum_probs=44.6
Q ss_pred eeccCCCCEEEEEcCC-ceEEEecCCcchhhee------------eeccCCCeEEEEEec--------ccceEEEeccCC
Q psy6185 3 SVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQI------------YENSQEDVCIVERLF--------SSSLVAVVSLSS 61 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~------------~~~~~g~v~ivEmLf--------~snLlalVg~~~ 61 (79)
..|.+|+|||.+-+++ +.++||+ |.|-...- ++-..|++..---.| +|||+|.-++-.
T Consensus 55 ckWSPDGSciL~~sedn~l~~~nl-P~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~ 133 (406)
T KOG2919|consen 55 CKWSPDGSCILSLSEDNCLNCWNL-PFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ 133 (406)
T ss_pred ceeCCCCceEEeecccCeeeEEec-ChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence 4689999999887766 9999986 33221111 111234444444444 688998776554
Q ss_pred CcEEEEEeCCCCeE
Q psy6185 62 PRKLTKEEGKNEEE 75 (79)
Q Consensus 62 prkL~I~d~~~~~~ 75 (79)
| +++||.-+++.
T Consensus 134 P--Ih~wdaftG~l 145 (406)
T KOG2919|consen 134 P--IHLWDAFTGKL 145 (406)
T ss_pred c--eeeeecccccc
Confidence 4 78999887764
No 21
>KOG1963|consensus
Probab=93.63 E-value=0.042 Score=46.00 Aligned_cols=71 Identities=14% Similarity=0.079 Sum_probs=45.7
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceE---EEeccCCCcEEEEEeCCCCeEE
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV---AVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLl---alVg~~~prkL~I~d~~~~~~I 76 (79)
..|.||+|+++||.++=..||+-...+.+.. .....+.-+.|.+|-.+.. |+|- .+.++|.+||..+...+
T Consensus 515 ~~fs~dGslla~s~~~~Itiwd~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~WNll~~~l~ 588 (792)
T KOG1963|consen 515 LCFSQDGSLLAVSFDDTITIWDYDTKNELLC--TEGSRNWPIAELLFTAQTQNDGALVH-ATQQRLSVWNLLSMSLI 588 (792)
T ss_pred hhhcCCCcEEEEecCCEEEEecCCChhhhhc--cccccccchHhHhhhcccccccceee-ccCceEehHhhhhhhee
Confidence 4699999999999999999997322111111 1123344566666655333 3332 56678999998876654
No 22
>KOG0973|consensus
Probab=93.56 E-value=0.33 Score=41.51 Aligned_cols=74 Identities=18% Similarity=0.101 Sum_probs=47.6
Q ss_pred CeeeccCCCCEEEEEcCCce-EEEecCC---------------cchh--heeeeccCCCeEEEEEecccceEEEeccCCC
Q psy6185 1 MCSVPLKGLLSLSVGTKSGY-RLFSLNS---------------IDTL--EQIYENSQEDVCIVERLFSSSLVAVVSLSSP 62 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~Gf-rIyn~~~---------------~d~~--~~~~~~~~g~v~ivEmLf~snLlalVg~~~p 62 (79)
.|+.|.+|+.+||.|.++.. .|+.-++ +|.- ...++...++|.=++-=...+++|-|| --
T Consensus 73 ~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s--~D 150 (942)
T KOG0973|consen 73 NCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVS--LD 150 (942)
T ss_pred eEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEec--cc
Confidence 48999999999999999954 3343221 1100 112223455665555555578887775 34
Q ss_pred cEEEEEeCCCCeEE
Q psy6185 63 RKLTKEEGKNEEEE 76 (79)
Q Consensus 63 rkL~I~d~~~~~~I 76 (79)
|++.|||-++-..+
T Consensus 151 nsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 151 NSVIIWNAKTFELL 164 (942)
T ss_pred ceEEEEccccceee
Confidence 89999998887444
No 23
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=93.48 E-value=1.2 Score=30.52 Aligned_cols=73 Identities=11% Similarity=-0.056 Sum_probs=49.1
Q ss_pred eeeccCCCCEEEEEcCC---c-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEecc----CCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKS---G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL----SSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~---G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~----~~prkL~I~d~~~~ 73 (79)
.+.||+++..+++|.-. | ..+|+.+. .+.....+...+..+|-=-...++|.... ...|..+||+.. |
T Consensus 105 ~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~---~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G 180 (194)
T PF08662_consen 105 TISWSPDGRFLVLAGFGNLNGDLEFWDVRK---KKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-G 180 (194)
T ss_pred EEEECCCCCEEEEEEccCCCcEEEEEECCC---CEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-C
Confidence 58899999999987533 3 78998653 33343444556677776667777776553 234688999985 5
Q ss_pred eEEee
Q psy6185 74 EEEKK 78 (79)
Q Consensus 74 ~~I~~ 78 (79)
+.+.+
T Consensus 181 ~~l~~ 185 (194)
T PF08662_consen 181 RLLYK 185 (194)
T ss_pred eEeEe
Confidence 56554
No 24
>KOG0318|consensus
Probab=93.12 E-value=0.92 Score=37.01 Aligned_cols=77 Identities=5% Similarity=0.016 Sum_probs=52.8
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeec--cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYEN--SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~--~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+|++||+|++-|+.+-.+ =.-||+=..-|+..+.-+. ..|++.-+--.=.+.=++-|+ +-...+|||...++.+.
T Consensus 194 ~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S--aDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 194 NCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVS--ADKTIKIWDVSTNSLVS 271 (603)
T ss_pred eeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEec--CCceEEEEEeeccceEE
Confidence 489999999999876665 4667864333444432212 467887777775666666675 34678999999988877
Q ss_pred eC
Q psy6185 78 KI 79 (79)
Q Consensus 78 ~~ 79 (79)
++
T Consensus 272 t~ 273 (603)
T KOG0318|consen 272 TW 273 (603)
T ss_pred Ee
Confidence 63
No 25
>PTZ00420 coronin; Provisional
Probab=92.56 E-value=1.7 Score=35.22 Aligned_cols=73 Identities=5% Similarity=-0.018 Sum_probs=45.7
Q ss_pred eeeccCCCCEE-EE-EcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSL-SV-GTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~-~v-gt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
++.|++++..+ +. |.+.-.+||++..-.. ...+. ..+.+.-+..-...+++|.. ..-++++|||.++++.+.+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~-~~~i~-~~~~V~SlswspdG~lLat~--s~D~~IrIwD~Rsg~~i~t 204 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKR-AFQIN-MPKKLSSLKWNIKGNLLSGT--CVGKHMHIIDPRKQEIASS 204 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcE-EEEEe-cCCcEEEEEECCCCCEEEEE--ecCCEEEEEECCCCcEEEE
Confidence 68899988754 44 4566799998654221 11122 23445555555566777544 3457899999998877653
No 26
>KOG0278|consensus
Probab=92.48 E-value=0.14 Score=38.74 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=54.3
Q ss_pred eeeccCCCCEEEEEc-CCceEEEecCCcc-hhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGT-KSGYRLFSLNSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt-~~GfrIyn~~~~d-~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.+.|.||...+..|- +.=.|||+.+.-+ |.++ ++...|+|.-|+-+..-+-+ .+...-+.|++||..+++++..
T Consensus 105 ~~af~~ds~~lltgg~ekllrvfdln~p~App~E-~~ghtg~Ir~v~wc~eD~~i--LSSadd~tVRLWD~rTgt~v~s 180 (334)
T KOG0278|consen 105 AVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKE-ISGHTGGIRTVLWCHEDKCI--LSSADDKTVRLWDHRTGTEVQS 180 (334)
T ss_pred eEEecccchhhhccchHHHhhhhhccCCCCCchh-hcCCCCcceeEEEeccCceE--EeeccCCceEEEEeccCcEEEE
Confidence 367999988766654 4588999876643 3333 45567888888887777654 5556779999999999988764
No 27
>KOG0640|consensus
Probab=92.15 E-value=0.38 Score=37.38 Aligned_cols=71 Identities=17% Similarity=0.102 Sum_probs=48.5
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeec-----cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYEN-----SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~-----~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
+|+||.+.+--+.+||+. -.|+|+++. +....+. ..+++. ..-|+++==-.|-+.....++|||-..++
T Consensus 220 rsiSfHPsGefllvgTdHp~~rlYdv~T---~QcfvsanPd~qht~ai~--~V~Ys~t~~lYvTaSkDG~IklwDGVS~r 294 (430)
T KOG0640|consen 220 RSISFHPSGEFLLVGTDHPTLRLYDVNT---YQCFVSANPDDQHTGAIT--QVRYSSTGSLYVTASKDGAIKLWDGVSNR 294 (430)
T ss_pred eeEeecCCCceEEEecCCCceeEEeccc---eeEeeecCccccccccee--EEEecCCccEEEEeccCCcEEeeccccHH
Confidence 489999999999999998 789998654 2222221 234444 44455554444555666899999987766
Q ss_pred EE
Q psy6185 75 EE 76 (79)
Q Consensus 75 ~I 76 (79)
.|
T Consensus 295 Cv 296 (430)
T KOG0640|consen 295 CV 296 (430)
T ss_pred HH
Confidence 54
No 28
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=92.10 E-value=1.8 Score=29.23 Aligned_cols=72 Identities=8% Similarity=0.006 Sum_probs=40.4
Q ss_pred eeccCCCCEEEE--EcCCceEEEecCCcchhheeeeccCCCeEEEEEeccc--ceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLLSLSV--GTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~sc~~v--gt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~s--nLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+.|++|+..+.+ +.++...||+.+.-+. ..... ..+. +-.+.|+. ..|+ ++....++|+|||..+++.+.+
T Consensus 212 i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~-~~~~~-~~~~--~~~~~~~~~g~~l~-~~~~~~~~i~v~d~~~~~~~~~ 286 (300)
T TIGR03866 212 IKLTKDGKTAFVALGPANRVAVVDAKTYEV-LDYLL-VGQR--VWQLAFTPDEKYLL-TTNGVSNDVSVIDVAALKVIKS 286 (300)
T ss_pred eEECCCCCEEEEEcCCCCeEEEEECCCCcE-EEEEE-eCCC--cceEEECCCCCEEE-EEcCCCCeEEEEECCCCcEEEE
Confidence 678999987544 3455788887543211 11111 1122 22333432 2443 3333457899999999988765
Q ss_pred C
Q psy6185 79 I 79 (79)
Q Consensus 79 ~ 79 (79)
|
T Consensus 287 ~ 287 (300)
T TIGR03866 287 I 287 (300)
T ss_pred E
Confidence 4
No 29
>KOG0302|consensus
Probab=90.25 E-value=1.8 Score=34.23 Aligned_cols=68 Identities=12% Similarity=0.128 Sum_probs=49.4
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchh--heeeeccCCCeEEEEEe-cccceEEEeccCCCcEEEEEeCC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTL--EQIYENSQEDVCIVERL-FSSSLVAVVSLSSPRKLTKEEGK 71 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~--~~~~~~~~g~v~ivEmL-f~snLlalVg~~~prkL~I~d~~ 71 (79)
=++||-+.+-+|.|-++| ++|+++.....- -..|.....+|.-+|-= .-++.+|..| +-+.+.|||-.
T Consensus 307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg--~D~QitiWDls 378 (440)
T KOG0302|consen 307 VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASG--EDNQITIWDLS 378 (440)
T ss_pred eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEecc--CCCcEEEEEee
Confidence 379999999999999997 588886654221 12455667888888853 4488888776 34789999954
No 30
>KOG0282|consensus
Probab=90.22 E-value=0.54 Score=37.73 Aligned_cols=73 Identities=10% Similarity=0.008 Sum_probs=44.7
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccc-eEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn-LlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.++|||+++.|..+.-+ =.++|++ |+-+.......+-+--+-=..-+| =+.|||+++ .|++-||.+.++.+.|
T Consensus 263 d~~~s~~g~~fLS~sfD~~lKlwDt---ETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd-~ki~~wDiRs~kvvqe 337 (503)
T KOG0282|consen 263 DASFNNCGTSFLSASFDRFLKLWDT---ETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSD-KKIRQWDIRSGKVVQE 337 (503)
T ss_pred hhhccccCCeeeeeecceeeeeecc---ccceEEEEEecCCCceeeecCCCCCcEEEEecCC-CcEEEEeccchHHHHH
Confidence 46899999987666555 4577764 332332222333333333344444 455788654 6889999999886655
No 31
>KOG1273|consensus
Probab=90.05 E-value=2 Score=33.47 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=43.8
Q ss_pred CeeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 1 MCSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
.|+.||.-++-+|+|..+| .-||+..+..+ .+.+....-++.-+--=-.--+ ++.+...+++++||..+++...+|
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~i-ar~lsaH~~pi~sl~WS~dgr~--LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTFRI-ARMLSAHVRPITSLCWSRDGRK--LLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccccch-hhhhhccccceeEEEecCCCCE--eeeecCCceeEEEeccCCCceeEE
Confidence 4889999999999999997 56776433221 1122222233322111000001 122355578899999888877664
No 32
>KOG1274|consensus
Probab=89.39 E-value=2.4 Score=36.38 Aligned_cols=73 Identities=12% Similarity=0.062 Sum_probs=56.2
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
.++.||-|++-+|.|.++ +.++-|..... -...++...++|..+-.==.-|+||.+. --.+|+|||...+..+
T Consensus 100 r~~~v~g~g~~iaagsdD~~vK~~~~~D~s-~~~~lrgh~apVl~l~~~p~~~fLAvss--~dG~v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 100 RDLAVSGSGKMIAAGSDDTAVKLLNLDDSS-QEKVLRGHDAPVLQLSYDPKGNFLAVSS--CDGKVQIWDLQDGILS 173 (933)
T ss_pred eEEEEecCCcEEEeecCceeEEEEeccccc-hheeecccCCceeeeeEcCCCCEEEEEe--cCceEEEEEcccchhh
Confidence 368899999999999888 99999854322 2346667788988888777788898884 3469999998877653
No 33
>KOG0647|consensus
Probab=88.47 E-value=4.2 Score=31.35 Aligned_cols=76 Identities=11% Similarity=-0.005 Sum_probs=51.8
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+|+.|+-|+|=+..|.-+ -.++|.+.. ... .......+++..+.+.-.-++=.||-|.=-+.|+.||.+...++..
T Consensus 76 L~v~WsddgskVf~g~~Dk~~k~wDL~S-~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t 152 (347)
T KOG0647|consen 76 LDVCWSDDGSKVFSGGCDKQAKLWDLAS-GQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVAT 152 (347)
T ss_pred EEEEEccCCceEEeeccCCceEEEEccC-CCe-eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeee
Confidence 478899999876555544 788997643 221 2234467888888877666644555554448999999998877643
No 34
>KOG0266|consensus
Probab=88.35 E-value=2.5 Score=32.56 Aligned_cols=77 Identities=13% Similarity=0.007 Sum_probs=54.7
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCC-eEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQED-VCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~-v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+++.|++++.-+.+++.+ =.++|++..- .....+.....+ .++.-+.+.++=-.++++...+.+.+||...+..++.
T Consensus 338 ~~~~fsp~~~~ll~~~~d~~~~~w~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~ 416 (456)
T KOG0266|consen 338 TSVQFSPNGKYLLSASLDRTLKLWDLRSG-KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQR 416 (456)
T ss_pred eEEEECCCCcEEEEecCCCeEEEEEccCC-cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhh
Confidence 367899999999999999 7899886532 122233332233 5666677676766777778889999999998766654
No 35
>PLN00181 protein SPA1-RELATED; Provisional
Probab=88.29 E-value=6.6 Score=32.09 Aligned_cols=67 Identities=18% Similarity=0.120 Sum_probs=42.2
Q ss_pred eeecc-CCCCEEEEEcCCc-eEEEecCCcc-hhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 2 CSVPL-KGLLSLSVGTKSG-YRLFSLNSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fN-QD~sc~~vgt~~G-frIyn~~~~d-~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
|+.|+ +++..+++|..+| .++|++.... +. .......+.+..+... ..++++.. ...+.++|||..+
T Consensus 622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~-~~~~~h~~~V~~v~f~-~~~~lvs~--s~D~~ikiWd~~~ 691 (793)
T PLN00181 622 CVQFPSESGRSLAFGSADHKVYYYDLRNPKLPL-CTMIGHSKTVSYVRFV-DSSTLVSS--STDNTLKLWDLSM 691 (793)
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCCccc-eEecCCCCCEEEEEEe-CCCEEEEE--ECCCEEEEEeCCC
Confidence 56774 5688899998886 7888864321 21 1223345677766664 45555443 3457899999764
No 36
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=87.81 E-value=6.5 Score=26.50 Aligned_cols=73 Identities=5% Similarity=-0.113 Sum_probs=38.5
Q ss_pred eeeccCCCCEEEEEcCCc--eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G--frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
++.|++|+..++++..++ ..+|+.+.-.... ..... .....+..--...+++ +++.....+.+||.++++.+.
T Consensus 119 ~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~-~~~~~~~~v~i~d~~~~~~~~ 193 (300)
T TIGR03866 119 GMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD-NVLVD-QRPRFAEFTADGKELW-VSSEIGGTVSVIDVATRKVIK 193 (300)
T ss_pred eEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE-EEEcC-CCccEEEECCCCCEEE-EEcCCCCEEEEEEcCcceeee
Confidence 467899999999988765 4455532211111 11111 1111122222233443 343445789999998877654
No 37
>KOG2321|consensus
Probab=87.66 E-value=1.1 Score=37.01 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=45.6
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccc--eEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn--LlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.++|+.|+--++|||.+| .-||++....|+-. ..+.+.+-|.-.-|--+ ==++|+ .+.+.|+|||...++.+.
T Consensus 233 al~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~--kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~a 308 (703)
T KOG2321|consen 233 ALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV--KDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMA 308 (703)
T ss_pred EEEecCCceeEEeeccCCcEEEEEcccCCceee--cccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCcee
Confidence 478999999999999999 45677655445221 22344444444433111 111233 566889999998887654
No 38
>KOG1036|consensus
Probab=87.40 E-value=4.7 Score=30.89 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=48.0
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+..|-.+.+-++.|.+.-.|.|+++. .+ ........+++..+|..+-.+.+ +-|+++ +++++||...
T Consensus 59 ~c~F~d~~~~~~G~~dg~vr~~Dln~-~~-~~~igth~~~i~ci~~~~~~~~v-IsgsWD-~~ik~wD~R~ 125 (323)
T KOG1036|consen 59 DCAFADESTIVTGGLDGQVRRYDLNT-GN-EDQIGTHDEGIRCIEYSYEVGCV-ISGSWD-KTIKFWDPRN 125 (323)
T ss_pred eeeccCCceEEEeccCceEEEEEecC-Cc-ceeeccCCCceEEEEeeccCCeE-EEcccC-ccEEEEeccc
Confidence 44566667777777777889998754 22 22345568899999999988887 335566 7889999874
No 39
>PLN00181 protein SPA1-RELATED; Provisional
Probab=87.27 E-value=8.5 Score=31.49 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=40.8
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCc--chhheee---e-ccCCCeEEEE-EecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSI--DTLEQIY---E-NSQEDVCIVE-RLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~--d~~~~~~---~-~~~g~v~ivE-mLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
+++|++|+..+++|..+ -.+||+.+.. +.....+ . .....+.-+- --+..+++|.. .....++|||..++
T Consensus 488 ~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~--~~Dg~v~lWd~~~~ 565 (793)
T PLN00181 488 AIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASS--NFEGVVQVWDVARS 565 (793)
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEE--eCCCeEEEEECCCC
Confidence 58899999999877766 6799985431 0000000 0 0011111111 11123455433 34579999999887
Q ss_pred eEEee
Q psy6185 74 EEEKK 78 (79)
Q Consensus 74 ~~I~~ 78 (79)
+.+..
T Consensus 566 ~~~~~ 570 (793)
T PLN00181 566 QLVTE 570 (793)
T ss_pred eEEEE
Confidence 76653
No 40
>KOG0272|consensus
Probab=86.68 E-value=3.2 Score=33.05 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=47.4
Q ss_pred eeeccCCCCEEEEEcCCce-EEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
+++|+||+|-.+.|--+-| |||++.. ..+...++..... |.-+=|+-|=.-+..+.+.+..+|||-.+.+++
T Consensus 308 ~iaf~~DGSL~~tGGlD~~~RvWDlRt-gr~im~L~gH~k~--I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~l 380 (459)
T KOG0272|consen 308 SIAFQPDGSLAATGGLDSLGRVWDLRT-GRCIMFLAGHIKE--ILSVAFSPNGYHLATGSSDNTCKVWDLRMRSEL 380 (459)
T ss_pred eeEecCCCceeeccCccchhheeeccc-CcEEEEecccccc--eeeEeECCCceEEeecCCCCcEEEeeecccccc
Confidence 7899999999888766643 8997543 1222334433333 344456666555555677799999998887764
No 41
>KOG0271|consensus
Probab=86.56 E-value=2.3 Score=33.76 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=43.6
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEE----------eccCCCcEEEEEe
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV----------VSLSSPRKLTKEE 69 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlal----------Vg~~~prkL~I~d 69 (79)
.|++|.+|++-++.|.-+ -.|+++++.--|..- ... -.|.+-- ++|...+.+++||
T Consensus 119 l~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t-~Kg------------H~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 119 LSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFT-CKG------------HKNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred EEEEecCCCceEEecCCCceEEeeccCCCCccee-ecC------------CccEEEEEEECCCcchhhccccCCeEEEec
Confidence 489999999999999866 899998754223211 111 1222222 2345558999999
Q ss_pred CCCCeEEee
Q psy6185 70 GKNEEEEKK 78 (79)
Q Consensus 70 ~~~~~~I~~ 78 (79)
.|++..|.+
T Consensus 186 pktg~~~g~ 194 (480)
T KOG0271|consen 186 PKTGQQIGR 194 (480)
T ss_pred CCCCCcccc
Confidence 999988754
No 42
>KOG0274|consensus
Probab=86.35 E-value=1.9 Score=34.58 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=46.5
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+.|.+-.-|++-+++...|+++......+...+... .++. -+|+++.+++ |++.+.+++++||.+.+..++.
T Consensus 377 l~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h-~~~v-~~l~~~~~~L--vs~~aD~~Ik~WD~~~~~~~~~ 448 (537)
T KOG0274|consen 377 LIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGH-TSLV-SSLLLRDNFL--VSSSADGTIKLWDAEEGECLRT 448 (537)
T ss_pred EEecCcceEEeeeeccceEeecCCchhhhhhhhcCC-cccc-ccccccccee--EeccccccEEEeecccCceeee
Confidence 344444567888888889999754321122233322 2222 5567777776 8889999999999988877653
No 43
>KOG0274|consensus
Probab=86.24 E-value=3.3 Score=33.28 Aligned_cols=64 Identities=14% Similarity=-0.001 Sum_probs=43.0
Q ss_pred EEEEcCCceE-EEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 12 LSVGTKSGYR-LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 12 ~~vgt~~Gfr-Iyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+..|....+- +|++.+.......+....|+|--++|....+++ |.+..-++++|||..++..++
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~l--vsgS~D~t~rvWd~~sg~C~~ 285 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKL--VSGSTDKTERVWDCSTGECTH 285 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEE--EEEecCCcEEeEecCCCcEEE
Confidence 3344555444 787544221111245578999999999988887 455666899999999887664
No 44
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=86.10 E-value=2.7 Score=28.49 Aligned_cols=54 Identities=15% Similarity=0.106 Sum_probs=33.3
Q ss_pred cCCCCEEEEEcCCceEEEecCC-cchhheeeeccCCCeEEEEEecccceEEEecc
Q psy6185 6 LKGLLSLSVGTKSGYRLFSLNS-IDTLEQIYENSQEDVCIVERLFSSSLVAVVSL 59 (79)
Q Consensus 6 NQD~sc~~vgt~~GfrIyn~~~-~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~ 59 (79)
+++.-++.+||.+..-.|+++. .|-|-+-.+.....+.+-.+=-...=+++|||
T Consensus 61 ~~~~D~LliGt~t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGG 115 (136)
T PF14781_consen 61 DDGRDCLLIGTQTSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGG 115 (136)
T ss_pred CCCcCEEEEeccceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECc
Confidence 3556678899999999998654 44443333322334444444334577889997
No 45
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=85.85 E-value=1.7 Score=21.45 Aligned_cols=22 Identities=18% Similarity=0.144 Sum_probs=17.8
Q ss_pred eeeccCCCCEEEEEcCCc-eEEE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLF 23 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIy 23 (79)
+++|+++...|++|..+| .+||
T Consensus 16 ~i~~~~~~~~~~s~~~D~~i~vw 38 (39)
T PF00400_consen 16 SIAWSPDGNFLASGSSDGTIRVW 38 (39)
T ss_dssp EEEEETTSSEEEEEETTSEEEEE
T ss_pred EEEEecccccceeeCCCCEEEEE
Confidence 789999999999988875 4555
No 46
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=85.76 E-value=1.5 Score=19.19 Aligned_cols=19 Identities=11% Similarity=-0.064 Sum_probs=14.0
Q ss_pred eeeccCCCCEEEEEcCCce
Q psy6185 2 CSVPLKGLLSLSVGTKSGY 20 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf 20 (79)
++.|+++...+++|..+|.
T Consensus 17 ~~~~~~~~~~~~~~~~d~~ 35 (40)
T smart00320 17 SVAFSPDGKYLASASDDGT 35 (40)
T ss_pred EEEECCCCCEEEEecCCCe
Confidence 5677877788877777764
No 47
>KOG0306|consensus
Probab=85.75 E-value=3.5 Score=35.09 Aligned_cols=65 Identities=17% Similarity=0.082 Sum_probs=49.0
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhhe--eeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeC
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQ--IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEG 70 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~--~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~ 70 (79)
+|+++.+|+.-+|||+-+ -.+||-+ |.++- .+-...=+|.-+..=|.|+|++- +.+.+.++||-.
T Consensus 512 L~v~~Spdgk~LaVsLLdnTVkVyfl---DtlKFflsLYGHkLPV~smDIS~DSklivT--gSADKnVKiWGL 579 (888)
T KOG0306|consen 512 LCVSVSPDGKLLAVSLLDNTVKVYFL---DTLKFFLSLYGHKLPVLSMDISPDSKLIVT--GSADKNVKIWGL 579 (888)
T ss_pred EEEEEcCCCcEEEEEeccCeEEEEEe---cceeeeeeecccccceeEEeccCCcCeEEe--ccCCCceEEecc
Confidence 589999999999999765 8999975 43443 22234557888888999999844 466788899953
No 48
>KOG0284|consensus
Probab=85.35 E-value=3.5 Score=32.85 Aligned_cols=74 Identities=8% Similarity=-0.031 Sum_probs=44.5
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhhe-eeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~-~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.|++|.+..|=|+.+.++ =.+|++.. .+.++ .++...-++--|.-==.-+|||- |+. -|.|++||+|++++||-
T Consensus 184 RdlafSpnDskF~t~SdDg~ikiWdf~--~~kee~vL~GHgwdVksvdWHP~kgLias-gsk-DnlVKlWDprSg~cl~t 259 (464)
T KOG0284|consen 184 RDLAFSPNDSKFLTCSDDGTIKIWDFR--MPKEERVLRGHGWDVKSVDWHPTKGLIAS-GSK-DNLVKLWDPRSGSCLAT 259 (464)
T ss_pred heeccCCCCceeEEecCCCeEEEEecc--CCchhheeccCCCCcceeccCCccceeEE-ccC-CceeEeecCCCcchhhh
Confidence 478888777777776766 57999732 22222 33333333433333333455543 433 35999999999999874
No 49
>KOG0771|consensus
Probab=85.35 E-value=1.7 Score=34.11 Aligned_cols=70 Identities=13% Similarity=0.084 Sum_probs=42.7
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchh-he-eeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTL-EQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~-~~-~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+++||+|+|=+++|-.+| +||++--...+. .+ -.+.+..++-.-+ .+-+||-+|+ | ...||+..++..+.
T Consensus 149 ~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~---dgk~lasig~--d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 149 VVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSP---DGKFLASIGA--D-SARVWSVNTGAALA 221 (398)
T ss_pred EEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCC---CCcEEEEecC--C-ceEEEEeccCchhh
Confidence 689999999999997776 799973222221 11 1122333322211 2236777764 3 88999999886554
No 50
>PF10763 DUF2584: Protein of unknown function (DUF2584); InterPro: IPR019699 This entry is represented by Bacteriophage 0305phi8-36, Orf221. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; PDB: 2NWA_F.
Probab=85.23 E-value=0.48 Score=29.53 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=16.7
Q ss_pred EEEEcCCceEEEecCCcc-hhheeeec--cCCCeEEEEEe
Q psy6185 12 LSVGTKSGYRLFSLNSID-TLEQIYEN--SQEDVCIVERL 48 (79)
Q Consensus 12 ~~vgt~~GfrIyn~~~~d-~~~~~~~~--~~g~v~ivEmL 48 (79)
+--+.+.||||| |+| |+...... +.-|.+++|-|
T Consensus 24 ~f~l~KeGYRiy---PldvPl~l~kt~~~e~~g~aiI~KL 60 (80)
T PF10763_consen 24 IFQLEKEGYRIY---PLDVPLPLRKTKWGEASGDAIIEKL 60 (80)
T ss_dssp EEEEEEES-EE-----SSSEEEEESS----EEEEEEEEEE
T ss_pred EEEEEeCcEEEE---eccCcEEEEEcccCccceeEEEEEE
Confidence 344578999999 665 65544332 33445555543
No 51
>KOG0306|consensus
Probab=83.08 E-value=1.9 Score=36.60 Aligned_cols=70 Identities=16% Similarity=0.078 Sum_probs=46.9
Q ss_pred eeeccCCCCEEEEEcCCce-EEEecCCcchhheeeeccCCCeEEEEEeccc--ceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~~~~~~~g~v~ivEmLf~s--nLlalVg~~~prkL~I~d~~~~~~I 76 (79)
++.|.++++|++.|..+|- -+|++ +..-. .|+-....=+|.+|+|.. +++.-| .....+++||-+++..+
T Consensus 112 ~l~fd~~G~rlaSGskDt~IIvwDl--V~E~G-l~rL~GHkd~iT~~~F~~~~~~lvS~--sKDs~iK~WdL~tqhCf 184 (888)
T KOG0306|consen 112 TLKFDKIGTRLASGSKDTDIIVWDL--VGEEG-LFRLRGHKDSITQALFLNGDSFLVSV--SKDSMIKFWDLETQHCF 184 (888)
T ss_pred EEEEcccCceEeecCCCccEEEEEe--cccee-eEEeecchHHHhHHhccCCCeEEEEe--ccCceEEEEecccceee
Confidence 6789999999999999964 44543 21101 222122244688999976 666555 45578999999988764
No 52
>KOG0291|consensus
Probab=82.75 E-value=1.4 Score=37.38 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=27.6
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCC---cchhhe
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNS---IDTLEQ 33 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~---~d~~~~ 33 (79)
.+.|.+-+-+||++|..|..||+++. +||+++
T Consensus 685 sv~fsPtgraFAaatTEGl~IYsld~~~~FDPf~L 719 (893)
T KOG0291|consen 685 SVQFSPTGRAFAAATTEGLLIYSLDTTILFDPFDL 719 (893)
T ss_pred EEEECCCcCeeeeecccceEEEecCCceEEccccc
Confidence 47899999999999999999999866 377766
No 53
>KOG0303|consensus
Probab=82.53 E-value=4.3 Score=32.34 Aligned_cols=63 Identities=10% Similarity=0.130 Sum_probs=45.6
Q ss_pred EEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 12 ~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
++.|.++=..|||+.+ -+....-+ .+--|.-|=|+.+-=.++..-.-+|++|||.++++.+.|
T Consensus 148 lsag~Dn~v~iWnv~t---geali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e 210 (472)
T KOG0303|consen 148 LSAGSDNTVSIWNVGT---GEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSE 210 (472)
T ss_pred hhccCCceEEEEeccC---CceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeee
Confidence 5677788889998543 23233322 455677788888777777777779999999999998765
No 54
>KOG0640|consensus
Probab=82.42 E-value=4.1 Score=31.81 Aligned_cols=71 Identities=6% Similarity=0.044 Sum_probs=46.4
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCc----ch-------------hheeeeccCCCeEEEEEecccceEEEeccCCC
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSI----DT-------------LEQIYENSQEDVCIVERLFSSSLVAVVSLSSP 62 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~----d~-------------~~~~~~~~~g~v~ivEmLf~snLlalVg~~~p 62 (79)
+|..||.|++-+|.|..+ ..+|+.++.. .| .-+.+-...++|.-++.-=|..++ .++...
T Consensus 116 R~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~IL--iS~srD 193 (430)
T KOG0640|consen 116 RAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETIL--ISGSRD 193 (430)
T ss_pred eeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheE--EeccCC
Confidence 367899999999999887 8999975421 01 001111124566666655566665 355666
Q ss_pred cEEEEEeCCCC
Q psy6185 63 RKLTKEEGKNE 73 (79)
Q Consensus 63 rkL~I~d~~~~ 73 (79)
+.|+++|+.|-
T Consensus 194 ~tvKlFDfsK~ 204 (430)
T KOG0640|consen 194 NTVKLFDFSKT 204 (430)
T ss_pred CeEEEEecccH
Confidence 89999998763
No 55
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=81.74 E-value=13 Score=25.81 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCceEEEec-CCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEe
Q psy6185 8 GLLSLSVGTKSGYRLFSL-NSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEE 69 (79)
Q Consensus 8 D~sc~~vgt~~GfrIyn~-~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d 69 (79)
.+.-+.+||++|.-+|+. ++..+ .+..+ ..++.-++-+-.-|++.++.. +.|.++|
T Consensus 6 ~~~~L~vGt~~Gl~~~~~~~~~~~-~~i~~--~~~I~ql~vl~~~~~llvLsd---~~l~~~~ 62 (275)
T PF00780_consen 6 WGDRLLVGTEDGLYVYDLSDPSKP-TRILK--LSSITQLSVLPELNLLLVLSD---GQLYVYD 62 (275)
T ss_pred CCCEEEEEECCCEEEEEecCCccc-eeEee--cceEEEEEEecccCEEEEEcC---CccEEEE
Confidence 456789999999999986 22222 22222 234777777777777777753 5666655
No 56
>KOG0279|consensus
Probab=81.31 E-value=8 Score=29.50 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=45.7
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeecc--CCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENS--QEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~--~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
+|++|+.|++=+..|..+ -.++||+-. .+.-...++ .+=|..|.--=+.+=.-||++...+.|++||-.+.+
T Consensus 109 lsva~s~dn~qivSGSrDkTiklwnt~g--~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~ 183 (315)
T KOG0279|consen 109 LSVAFSTDNRQIVSGSRDKTIKLWNTLG--VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ 183 (315)
T ss_pred EEEEecCCCceeecCCCcceeeeeeecc--cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc
Confidence 589999999999999887 889998422 222222222 223444443333324456777667899999976543
No 57
>KOG0319|consensus
Probab=81.16 E-value=6.3 Score=33.31 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=49.8
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
|++|.|-.-+++.+..+ =.|||+++... +-..++.+...|-=++ |-+|===+|++-+..-++|||.|++..++-
T Consensus 510 ~V~Fs~~dq~laT~SgD~TvKIW~is~fS-ClkT~eGH~~aVlra~--F~~~~~qliS~~adGliKlWnikt~eC~~t 584 (775)
T KOG0319|consen 510 CVSFSKNDQLLATCSGDKTVKIWSISTFS-CLKTFEGHTSAVLRAS--FIRNGKQLISAGADGLIKLWNIKTNECEMT 584 (775)
T ss_pred EEEeccccceeEeccCCceEEEEEeccce-eeeeecCccceeEeee--eeeCCcEEEeccCCCcEEEEeccchhhhhh
Confidence 78999998888877766 79999875522 1224454434443333 334434457777788999999999887653
No 58
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=80.95 E-value=16 Score=26.78 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=41.5
Q ss_pred CCCCEEEEEcCCceEEEecCCc-chhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEe
Q psy6185 7 KGLLSLSVGTKSGYRLFSLNSI-DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEE 69 (79)
Q Consensus 7 QD~sc~~vgt~~GfrIyn~~~~-d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d 69 (79)
-|+..+.+||++|.-+.+.+.- +...+.++ ...|..+|.+=.=|+++++++.. ++|..+|
T Consensus 11 ~~~~~lL~GTe~Gly~~~~~~~~~~~~kl~~--~~~v~q~~v~~~~~lLi~Lsgk~-~~L~~~~ 71 (302)
T smart00036 11 CDGKWLLVGTEEGLYVLNISDQPGTLEKLIG--RRSVTQIWVLEENNVLLMISGKK-PQLYSHP 71 (302)
T ss_pred cCCcEEEEEeCCceEEEEcccCCCCeEEecC--cCceEEEEEEhhhCEEEEEeCCc-ceEEEEE
Confidence 3445799999999998885432 22233333 45788889888889998888654 3566665
No 59
>KOG0264|consensus
Probab=80.51 E-value=8.2 Score=30.60 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=42.9
Q ss_pred CeeeccCCCC-EEEEEc-CCceEEEecCCcchhheeeeccCCCeEEEEE-ecccceEEEeccCCCcEEEEEeCCC
Q psy6185 1 MCSVPLKGLL-SLSVGT-KSGYRLFSLNSIDTLEQIYENSQEDVCIVER-LFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 1 ~~~~fNQD~s-c~~vgt-~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEm-Lf~snLlalVg~~~prkL~I~d~~~ 72 (79)
.|++||+-.. -+|.|. +.=.++|++.++...-..++...+.|.-||- =+..+++|-- -.-|+|+|||..+
T Consensus 276 n~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASS--g~D~rl~vWDls~ 348 (422)
T KOG0264|consen 276 NCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASS--GTDRRLNVWDLSR 348 (422)
T ss_pred eEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEec--ccCCcEEEEeccc
Confidence 4889998654 466666 4468889866643212234555666666653 2334444443 3569999999765
No 60
>KOG0310|consensus
Probab=80.46 E-value=10 Score=30.54 Aligned_cols=76 Identities=17% Similarity=0.092 Sum_probs=49.1
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
.++|-+|+--+|+|.++| .+||..++=--++. +.....++-.+.-==.-|.+ ++.+.+-+++++||-.+..++.||
T Consensus 73 s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~-~~ah~apv~~~~f~~~d~t~-l~s~sDd~v~k~~d~s~a~v~~~l 149 (487)
T KOG0310|consen 73 SVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQ-LYAHQAPVHVTKFSPQDNTM-LVSGSDDKVVKYWDLSTAYVQAEL 149 (487)
T ss_pred EEEeecCCeEEEccCCcCcEEEeccccHHHHHH-HhhccCceeEEEecccCCeE-EEecCCCceEEEEEcCCcEEEEEe
Confidence 578999999999999998 68997543112222 22233444443322244444 456688899999998888775554
No 61
>KOG0289|consensus
Probab=80.13 E-value=10 Score=30.58 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=46.7
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
.++|.-.+=-++++.++| .++|++.....++..--.+.-++.-++.=-+..++++-| +.|+||..+++
T Consensus 394 ~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g----~~l~Vy~~~k~ 462 (506)
T KOG0289|consen 394 AISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG----SDLQVYICKKK 462 (506)
T ss_pred EEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec----ceeEEEEEecc
Confidence 367888888999999999 999986544333322222333566666666777777766 77888887743
No 62
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=79.74 E-value=4.4 Score=22.30 Aligned_cols=24 Identities=21% Similarity=0.391 Sum_probs=20.8
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEec
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSL 25 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~ 25 (79)
+++|++...-+|+|+++| ..||.+
T Consensus 16 ~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 16 CMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred EEEECCCCCEEEEEECCCeEEEEEC
Confidence 678999999999999998 777764
No 63
>KOG0291|consensus
Probab=78.54 E-value=13 Score=31.82 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=47.4
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
|+.+.+|++-++.|-++| .||||... .-|-..|.....++.-+.---+-+.+ ++..=..+|+.||.++.+
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~S-gfC~vTFteHts~Vt~v~f~~~g~~l--lssSLDGtVRAwDlkRYr 425 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQS-GFCFVTFTEHTSGVTAVQFTARGNVL--LSSSLDGTVRAWDLKRYR 425 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccC-ceEEEEeccCCCceEEEEEEecCCEE--EEeecCCeEEeeeecccc
Confidence 788999999999999995 89998543 12334566666777766654433332 343334678899988754
No 64
>KOG0286|consensus
Probab=77.41 E-value=13 Score=28.59 Aligned_cols=75 Identities=15% Similarity=0.069 Sum_probs=54.8
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.++|-+++--|+.|.++| -|.|++.. |.--..|+.+....++.-..|+.|==-+..++......+||.-+++.+.
T Consensus 234 sv~ffP~G~afatGSDD~tcRlyDlRa-D~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg 309 (343)
T KOG0286|consen 234 SVRFFPSGDAFATGSDDATCRLYDLRA-DQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVG 309 (343)
T ss_pred eEEEccCCCeeeecCCCceeEEEeecC-CcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEE
Confidence 578999999999999995 68998653 4323467766666667777777663333344777889999999887765
No 65
>KOG0318|consensus
Probab=77.34 E-value=20 Score=29.60 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=47.3
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhhe-eeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~-~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
|+++++|.+-++||-++| ..||.++..+..++ ......+.+..|- |+-++--|+.+-..||+.+||...+.+
T Consensus 448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~va--ySpd~~yla~~Da~rkvv~yd~~s~~~ 521 (603)
T KOG0318|consen 448 AVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVA--YSPDGAYLAAGDASRKVVLYDVASREV 521 (603)
T ss_pred eEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEE--ECCCCcEEEEeccCCcEEEEEcccCce
Confidence 678999999999999995 78998765322222 2223345554433 455555555556778999999776654
No 66
>KOG0288|consensus
Probab=77.02 E-value=1.8 Score=34.39 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=44.5
Q ss_pred eeccCCCC-EEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLL-SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~s-c~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+.|..|+. ++|.+.+.-.|+||.+.. .+...++...+.|.-+.-. .++.= +|++...|.+++||-.++....+
T Consensus 225 ~d~d~~~~~~iAas~d~~~r~Wnvd~~-r~~~TLsGHtdkVt~ak~~-~~~~~-vVsgs~DRtiK~WDl~k~~C~kt 298 (459)
T KOG0288|consen 225 IDFDSDNKHVIAASNDKNLRLWNVDSL-RLRHTLSGHTDKVTAAKFK-LSHSR-VVSGSADRTIKLWDLQKAYCSKT 298 (459)
T ss_pred eeecCCCceEEeecCCCceeeeeccch-hhhhhhcccccceeeehhh-ccccc-eeeccccchhhhhhhhhhheecc
Confidence 44555655 555555556999996542 2233445455666555443 33332 67778888999999887665543
No 67
>KOG2110|consensus
Probab=75.70 E-value=15 Score=28.86 Aligned_cols=75 Identities=8% Similarity=0.036 Sum_probs=52.4
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccc--eEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn--LlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
++.+|-+. +.|..+.-.-|||++.+.++.-+-.....+-++.-+=.+.+ ++|.=|...+..|.|||.-+=+.+..
T Consensus 92 ~VrmNr~R--LvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~ 168 (391)
T KOG2110|consen 92 AVRMNRKR--LVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNT 168 (391)
T ss_pred EEEEccce--EEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeE
Confidence 45566544 56667777999998876554433333356667777777665 99998888899999999876555543
No 68
>KOG2315|consensus
Probab=74.26 E-value=21 Score=29.39 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=45.0
Q ss_pred eeeccCCCCEEEEE--c-CCceEEEecCCcchhheeeeccCCCeEEEEEec--ccceEEEec-cCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLSVG--T-KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLF--SSSLVAVVS-LSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~vg--t-~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf--~snLlalVg-~~~prkL~I~d~~~~~~ 75 (79)
++.||.+++=|+|- - ..-..|||++ ++| .++-..|+-.- |+| ..|+++|-| |.-|..+-|||..+.+.
T Consensus 275 dv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~---v~df~egpRN~--~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 275 DVTWSPSGREFAVVYGFMPAKVTIFNLR-GKP---VFDFPEGPRNT--AFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred EEEECCCCCEEEEEEecccceEEEEcCC-CCE---eEeCCCCCccc--eEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 67899999766653 2 2255688743 233 44433333322 233 357888877 47789999999998877
Q ss_pred Eee
Q psy6185 76 EKK 78 (79)
Q Consensus 76 I~~ 78 (79)
|..
T Consensus 349 i~~ 351 (566)
T KOG2315|consen 349 IAK 351 (566)
T ss_pred ccc
Confidence 754
No 69
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=74.24 E-value=2.3 Score=33.33 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=14.5
Q ss_pred CCCCEEEEEcCCceEEE
Q psy6185 7 KGLLSLSVGTKSGYRLF 23 (79)
Q Consensus 7 QD~sc~~vgt~~GfrIy 23 (79)
.|.+|++||+.+||--|
T Consensus 77 ~dw~~I~VG~ssG~vrf 93 (415)
T PF14655_consen 77 PDWTCIAVGTSSGYVRF 93 (415)
T ss_pred CCcEEEEEEecccEEEE
Confidence 67899999999998544
No 70
>KOG2055|consensus
Probab=73.43 E-value=4.6 Score=32.58 Aligned_cols=67 Identities=15% Similarity=0.153 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCCce-EEEecCCc--c----hhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 7 KGLLSLSVGTKSGY-RLFSLNSI--D----TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 7 QD~sc~~vgt~~Gf-rIyn~~~~--d----~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
++++-||+|++.|+ -||+-+.+ + |.. .+..-.-.|.-..-=..+-|+||++.-.++.|++.|.-..+
T Consensus 397 ~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik-~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T 470 (514)
T KOG2055|consen 397 LNGSYLATGSDSGIVNIYDGNSCFASTNPKPIK-TVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT 470 (514)
T ss_pred CCCceEEeccCcceEEEeccchhhccCCCCchh-hhhhhheeeeeeeeCcchhhhhhhhhccccceEEEecccee
Confidence 44559999999996 58864332 1 111 11122345555555556779999999888889888865433
No 71
>KOG0272|consensus
Probab=72.88 E-value=17 Score=29.04 Aligned_cols=77 Identities=14% Similarity=0.057 Sum_probs=55.0
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
..+|..|..-++.|.=.| -++++...+ +....+....+.++-++--=-.+=+.++.+...+.+++|+..+.+.|.++
T Consensus 180 ~~~fS~ds~~laT~swsG~~kvW~~~~~-~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l 257 (459)
T KOG0272|consen 180 GCSFSRDSKHLATGSWSGLVKVWSVPQC-NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDL 257 (459)
T ss_pred eeEeecCCCeEEEeecCCceeEeecCCc-ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhh
Confidence 357899999999998887 589986555 44455666666666555443335566777777799999999988777653
No 72
>KOG0289|consensus
Probab=72.35 E-value=38 Score=27.42 Aligned_cols=75 Identities=12% Similarity=-0.027 Sum_probs=43.4
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEE-EecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVE-RLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivE-mLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.++-+.-+-.|..+.++|+..|+--..+..-...+.+..+|.+-- -++--.||- +-+.+.-.|+|||.|.+....
T Consensus 308 ~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLif-gtgt~d~~vkiwdlks~~~~a 383 (506)
T KOG0289|consen 308 GLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIF-GTGTPDGVVKIWDLKSQTNVA 383 (506)
T ss_pred eeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEE-eccCCCceEEEEEcCCccccc
Confidence 456677778899999999999963221110001111223343322 234444442 233666799999999887654
No 73
>KOG2919|consensus
Probab=70.23 E-value=16 Score=28.70 Aligned_cols=71 Identities=10% Similarity=0.016 Sum_probs=45.4
Q ss_pred eeeccCCCC-EEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 2 CSVPLKGLL-SLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 2 ~~~fNQD~s-c~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
|++||+-.+ |++||+=. -+-||+-+.-.|+.... ...|||....-=---|= -++|+..--|+..||-++-+
T Consensus 212 c~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg-gh~gGvThL~~~edGn~-lfsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 212 CFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG-GHGGGVTHLQWCEDGNK-LFSGARKDDKILCWDIRYSR 284 (406)
T ss_pred eeeccCCCCcceeeecccceeeeEecCCCCceeeec-ccCCCeeeEEeccCcCe-ecccccCCCeEEEEeehhcc
Confidence 788998777 99999865 67788754445655443 35677776432222221 12677666688899976543
No 74
>KOG0296|consensus
Probab=69.52 E-value=39 Score=26.69 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=41.6
Q ss_pred eeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 3 SVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
+.|-|-+--|+.|.++| ...|++.. +...+.++....++.-=|.+=-=- -+++| +....|++||.|++..++.+
T Consensus 154 l~WHp~a~illAG~~DGsvWmw~ip~-~~~~kv~~Gh~~~ct~G~f~pdGK-r~~tg-y~dgti~~Wn~ktg~p~~~~ 228 (399)
T KOG0296|consen 154 LKWHPRAHILLAGSTDGSVWMWQIPS-QALCKVMSGHNSPCTCGEFIPDGK-RILTG-YDDGTIIVWNPKTGQPLHKI 228 (399)
T ss_pred EEecccccEEEeecCCCcEEEEECCC-cceeeEecCCCCCcccccccCCCc-eEEEE-ecCceEEEEecCCCceeEEe
Confidence 45677788899999996 56676532 222334443222222211111100 11122 55678999999999998864
No 75
>KOG0263|consensus
Probab=68.63 E-value=31 Score=29.16 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=48.6
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
++.|.+++--++.|.++| .+||.+..-.+..+. ..+.+.+.-++-=...+++|. | ..-+.|++||..+-
T Consensus 582 al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l-~~Ht~ti~SlsFS~dg~vLas-g-g~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 582 ALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQL-KGHTGTIYSLSFSRDGNVLAS-G-GADNSVRLWDLTKV 651 (707)
T ss_pred EEEEcCCCceEeecccCCcEEEEEcCCCcchhhh-hcccCceeEEEEecCCCEEEe-c-CCCCeEEEEEchhh
Confidence 578999999999999996 578876543333332 223677777777777777754 3 44589999997653
No 76
>KOG0282|consensus
Probab=68.51 E-value=18 Score=29.27 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=51.6
Q ss_pred CeeeccCCC-CEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 1 MCSVPLKGL-LSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 1 ~~~~fNQD~-sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.|+.|++|. .-|.||+.+| .+-|++.. ..+-+-|.++.|++.-++-+=-..-+ |+...-..++||+......|.-
T Consensus 303 ~cvkf~pd~~n~fl~G~sd~ki~~wDiRs-~kvvqeYd~hLg~i~~i~F~~~g~rF--issSDdks~riWe~~~~v~ik~ 379 (503)
T KOG0282|consen 303 TCVKFHPDNQNIFLVGGSDKKIRQWDIRS-GKVVQEYDRHLGAILDITFVDEGRRF--ISSSDDKSVRIWENRIPVPIKN 379 (503)
T ss_pred eeeecCCCCCcEEEEecCCCcEEEEeccc-hHHHHHHHhhhhheeeeEEccCCceE--eeeccCccEEEEEcCCCccchh
Confidence 489999998 7799998884 66776543 23344566677777766655555444 3335566899999888776654
No 77
>KOG0643|consensus
Probab=67.77 E-value=52 Score=25.24 Aligned_cols=73 Identities=10% Similarity=-0.019 Sum_probs=48.2
Q ss_pred eeccCCCCE-EEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLLS-LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~sc-~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+.||-|+-- |+||-+.--.|+-..+=+.+. .|....|.|=-+..=..|..+ +.+.+.+..++||.++++.+..
T Consensus 16 iKyN~eGDLlFscaKD~~~~vw~s~nGerlG-ty~GHtGavW~~Did~~s~~l--iTGSAD~t~kLWDv~tGk~la~ 89 (327)
T KOG0643|consen 16 IKYNREGDLLFSCAKDSTPTVWYSLNGERLG-TYDGHTGAVWCCDIDWDSKHL--ITGSADQTAKLWDVETGKQLAT 89 (327)
T ss_pred EEecCCCcEEEEecCCCCceEEEecCCceee-eecCCCceEEEEEecCCccee--eeccccceeEEEEcCCCcEEEE
Confidence 567877764 666666655555321112222 355567888777766666655 5567788999999999998864
No 78
>KOG0645|consensus
Probab=67.62 E-value=13 Score=28.27 Aligned_cols=25 Identities=8% Similarity=0.153 Sum_probs=21.9
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecC
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLN 26 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~ 26 (79)
|++||.++.++|.++.+ -..|+..+
T Consensus 110 ~Vaws~sG~~LATCSRDKSVWiWe~d 135 (312)
T KOG0645|consen 110 CVAWSASGNYLATCSRDKSVWIWEID 135 (312)
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEEec
Confidence 89999999999988877 88888754
No 79
>KOG0264|consensus
Probab=67.24 E-value=17 Score=28.91 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=41.9
Q ss_pred ccCCCCEEEEEcCCceEEEecCCcch------hheeeeccCCCeEEE-EEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 5 PLKGLLSLSVGTKSGYRLFSLNSIDT------LEQIYENSQEDVCIV-ERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 5 fNQD~sc~~vgt~~GfrIyn~~~~d~------~~~~~~~~~g~v~iv-EmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
.+|-++-++.+.+.+.+++.++.... .+..|......|--| =+++..+|+|-|| .-++|+|||.++
T Consensus 187 ~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~--dd~~L~iwD~R~ 259 (422)
T KOG0264|consen 187 RQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVG--DDGKLMIWDTRS 259 (422)
T ss_pred cccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeec--CCCeEEEEEcCC
Confidence 34455557777777999998765321 112344333322222 2678899999996 457999999996
No 80
>KOG0263|consensus
Probab=67.11 E-value=26 Score=29.55 Aligned_cols=72 Identities=19% Similarity=0.097 Sum_probs=53.8
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
++.|++-+--||.|..++ =|+|.++..+|++ ++..+.+++.-|--==++|++|- | .+-+.+++||..++..+
T Consensus 498 dV~F~P~GyYFatas~D~tArLWs~d~~~PlR-ifaghlsDV~cv~FHPNs~Y~aT-G-SsD~tVRlWDv~~G~~V 570 (707)
T KOG0263|consen 498 DVQFAPRGYYFATASHDQTARLWSTDHNKPLR-IFAGHLSDVDCVSFHPNSNYVAT-G-SSDRTVRLWDVSTGNSV 570 (707)
T ss_pred eEEecCCceEEEecCCCceeeeeecccCCchh-hhcccccccceEEECCccccccc-C-CCCceEEEEEcCCCcEE
Confidence 477888888888876663 3788877777754 45556677777776678888864 3 77899999999888654
No 81
>KOG2048|consensus
Probab=66.98 E-value=55 Score=27.60 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=45.4
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcchhheeeec----cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYEN----SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~----~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
++-|...+-+++|.++|...|=. ..|-...|.+ +.+ .+.-.=|...-.-++||..-..++|||.+++.+..
T Consensus 116 iai~p~~~~l~IgcddGvl~~~s--~~p~~I~~~r~l~rq~s--RvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 116 IAINPENTILAIGCDDGVLYDFS--IGPDKITYKRSLMRQKS--RVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred EEeCCccceEEeecCCceEEEEe--cCCceEEEEeecccccc--eEEEEEecCCccEEEecccCceEEEEEcCCCceEE
Confidence 45677788999999999665521 2232233333 222 22333345555556888888899999999988764
No 82
>KOG1446|consensus
Probab=66.38 E-value=55 Score=25.07 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=42.7
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcc-hhheeeec--cCCCeEEEEEec--ccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSID-TLEQIYEN--SQEDVCIVERLF--SSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d-~~~~~~~~--~~g~v~ivEmLf--~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
-+.|..|+.++.++|+.|+- |-++..+ .....++. ..+.+- ++--| -+..| +++..-.++.|||-+++...
T Consensus 192 ~l~FS~dGK~iLlsT~~s~~-~~lDAf~G~~~~tfs~~~~~~~~~-~~a~ftPds~Fv--l~gs~dg~i~vw~~~tg~~v 267 (311)
T KOG1446|consen 192 DLEFSPDGKSILLSTNASFI-YLLDAFDGTVKSTFSGYPNAGNLP-LSATFTPDSKFV--LSGSDDGTIHVWNLETGKKV 267 (311)
T ss_pred eeEEcCCCCEEEEEeCCCcE-EEEEccCCcEeeeEeeccCCCCcc-eeEEECCCCcEE--EEecCCCcEEEEEcCCCcEe
Confidence 36899999999999999964 3333322 21223332 122222 34444 23332 34466689999999888765
Q ss_pred e
Q psy6185 77 K 77 (79)
Q Consensus 77 ~ 77 (79)
.
T Consensus 268 ~ 268 (311)
T KOG1446|consen 268 A 268 (311)
T ss_pred e
Confidence 4
No 83
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=65.49 E-value=47 Score=23.69 Aligned_cols=72 Identities=4% Similarity=-0.205 Sum_probs=37.3
Q ss_pred eeeccCCCCEEEEEc--CCceEEEecCCcchhheeeeccCCCeEEEEEecc-cceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGT--KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFS-SSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt--~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~-snLlalVg~~~prkL~I~d~~~~ 73 (79)
.+.|++|+.-+.++. .....+|+.++-...........+.-..-.+.+. ..=.++|.....++|.+||..+.
T Consensus 84 ~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred EEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 477899998888776 3467888764211111111110111111112222 22234555566789999997653
No 84
>KOG0303|consensus
Probab=64.87 E-value=14 Score=29.56 Aligned_cols=69 Identities=13% Similarity=-0.005 Sum_probs=40.4
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEecc---CCCcEEEEEeCCC
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL---SSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~---~~prkL~I~d~~~ 72 (79)
.++||-|++-|+...++ -.||++...-+...+- ..-.|..-..-+|-.|...+.-| .+.|.+-+||.+.
T Consensus 178 S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~--~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n 250 (472)
T KOG0303|consen 178 SMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG--VAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN 250 (472)
T ss_pred EEEeccCCceeeeecccceeEEEcCCCCcEeeec--ccccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence 57999999999887776 8999963211111111 11233333344444444433333 7778999999664
No 85
>KOG1645|consensus
Probab=64.65 E-value=28 Score=27.87 Aligned_cols=56 Identities=16% Similarity=0.140 Sum_probs=34.9
Q ss_pred CceEEEecCCcch-hheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 18 SGYRLFSLNSIDT-LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 18 ~GfrIyn~~~~d~-~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+||-|..+.+..- -..+-......+.-+|.+ |+|..+|+ +.|.|++||..+.+...
T Consensus 369 dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~n---n~iv~~gd-~tn~lil~D~~s~evvQ 425 (463)
T KOG1645|consen 369 DGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDN---NYIVVVGD-STNELILQDPHSFEVVQ 425 (463)
T ss_pred cCceeeeecccccCCcccccccccceeccccc---cEEEEecC-CcceeEEeccchhheee
Confidence 5888876555320 000001123455556666 88888886 77999999998877654
No 86
>KOG2106|consensus
Probab=64.53 E-value=46 Score=27.54 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=20.5
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEec
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSL 25 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~ 25 (79)
+++||||+.-||||+.++ .-||.+
T Consensus 452 ~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 452 VVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred EEEEcCCCCEEEEecCCCeEEEEEE
Confidence 789999999999999995 467764
No 87
>KOG0294|consensus
Probab=64.03 E-value=31 Score=26.80 Aligned_cols=69 Identities=7% Similarity=0.040 Sum_probs=45.8
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCC--eEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQED--VCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~--v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+.|.+.+.-|+++..++.-||.++...-|++ -..+ +..+--|..+ .-+||+-. +-+.+||+......++
T Consensus 174 v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~----i~~~~r~l~~~~l~~~--~L~vG~d~-~~i~~~D~ds~~~~~~ 244 (362)
T KOG0294|consen 174 VSWSPQGDHFVVSGRNKIDIYQLDNASVFRE----IENPKRILCATFLDGS--ELLVGGDN-EWISLKDTDSDTPLTE 244 (362)
T ss_pred eEEcCCCCEEEEEeccEEEEEecccHhHhhh----hhccccceeeeecCCc--eEEEecCC-ceEEEeccCCCcccee
Confidence 6788899999999999999998655333332 2223 3334444444 33578544 7889999887766655
No 88
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=63.52 E-value=41 Score=22.33 Aligned_cols=72 Identities=17% Similarity=0.052 Sum_probs=41.3
Q ss_pred eccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 4 VPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 4 ~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.|.+++..++.+..+ -+++|+..........+......+.-++..-..+.++. |+.. +.+.+||..+.....
T Consensus 248 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d-~~~~~~~~~~~~~~~ 320 (466)
T COG2319 248 SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS-GSSD-GTVRLWDLETGKLLS 320 (466)
T ss_pred eECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEE-eeCC-CcEEEEEcCCCceEE
Confidence 477777777766665 58999765432211122222344444433333466666 6666 679999887766543
No 89
>KOG1310|consensus
Probab=63.38 E-value=43 Score=28.11 Aligned_cols=70 Identities=10% Similarity=0.022 Sum_probs=47.6
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcc-hhhee-eeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSID-TLEQI-YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d-~~~~~-~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+|+.||.|+.-++.|.++ -.-||+ |++ ++.+. .....+.|--|.-+=-||==-++++....+++++|..+
T Consensus 54 N~LeWn~dG~lL~SGSDD~r~ivWd--~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 54 NCLEWNADGELLASGSDDTRLIVWD--PFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred cceeecCCCCEEeecCCcceEEeec--chhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 589999999999999987 555664 332 11111 11256677777777666655566667778999999765
No 90
>KOG0316|consensus
Probab=62.82 E-value=28 Score=26.32 Aligned_cols=66 Identities=14% Similarity=0.159 Sum_probs=44.3
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCC--cchhheeeeccCCCe---EEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNS--IDTLEQIYENSQEDV---CIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~--~d~~~~~~~~~~g~v---~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
-+.||.+.|-++.|.-+ -.|.|+|.. .+|.. ++.....+| -+.|-+ ||+|.....++.||-+++++
T Consensus 106 tV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQ-ildea~D~V~Si~v~~he-------IvaGS~DGtvRtydiR~G~l 177 (307)
T KOG0316|consen 106 TVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQ-ILDEAKDGVSSIDVAEHE-------IVAGSVDGTVRTYDIRKGTL 177 (307)
T ss_pred EEEecCcceEEEeccccceeEEEEcccCCCCccc-hhhhhcCceeEEEecccE-------EEeeccCCcEEEEEeeccee
Confidence 47899999988777655 999999865 35633 333323333 333332 57777778888888887765
No 91
>KOG1407|consensus
Probab=61.78 E-value=49 Score=25.25 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=40.1
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEec
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVS 58 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg 58 (79)
.|+.|.+|+--||+|..+ -..+++++.+ -+.+++.+-+=+|.-+--=+..-+||--+
T Consensus 193 icI~f~p~GryfA~GsADAlvSLWD~~EL-iC~R~isRldwpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 193 ICIEFDPDGRYFATGSADALVSLWDVDEL-ICERCISRLDWPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred EEEEECCCCceEeeccccceeeccChhHh-hhheeeccccCceEEEEeccCcceeeccC
Confidence 489999999999999988 5566653321 23456777677777776666666776543
No 92
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=61.50 E-value=54 Score=23.58 Aligned_cols=61 Identities=23% Similarity=0.229 Sum_probs=37.8
Q ss_pred CCEEEEEcCC----------c-eEEEecCCc----chhheeeec-cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 9 LLSLSVGTKS----------G-YRLFSLNSI----DTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 9 ~sc~~vgt~~----------G-frIyn~~~~----d~~~~~~~~-~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
...++|||.. | ..+|++... ..+++.++. ..|++.-+.-+ ...|+|-+| ++|.+|+.+.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~lv~~~g----~~l~v~~l~~ 116 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGRLVVAVG----NKLYVYDLDN 116 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTEEEEEET----TEEEEEEEET
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCEEEEeec----CEEEEEEccC
Confidence 6889999862 3 456665442 134444443 34666444444 666999998 8899988766
Q ss_pred Ce
Q psy6185 73 EE 74 (79)
Q Consensus 73 ~~ 74 (79)
++
T Consensus 117 ~~ 118 (321)
T PF03178_consen 117 SK 118 (321)
T ss_dssp TS
T ss_pred cc
Confidence 55
No 93
>KOG0299|consensus
Probab=59.71 E-value=53 Score=26.56 Aligned_cols=64 Identities=14% Similarity=0.131 Sum_probs=49.9
Q ss_pred CCEEEEE-cCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 9 LLSLSVG-TKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 9 ~sc~~vg-t~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.-|++|| -+.-.|+|.+ | |--+++|....+++--|-|.-..-+ |.|.+-..+-+|+..|++.|+
T Consensus 298 eR~vtVGgrDrT~rlwKi-~-eesqlifrg~~~sidcv~~In~~Hf---vsGSdnG~IaLWs~~KKkplf 362 (479)
T KOG0299|consen 298 ERCVTVGGRDRTVRLWKI-P-EESQLIFRGGEGSIDCVAFINDEHF---VSGSDNGSIALWSLLKKKPLF 362 (479)
T ss_pred cceEEeccccceeEEEec-c-ccceeeeeCCCCCeeeEEEecccce---eeccCCceEEEeeecccCcee
Confidence 3489999 6668999987 3 3346788877788888888876654 466888899999999998875
No 94
>KOG0279|consensus
Probab=59.62 E-value=46 Score=25.50 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=48.4
Q ss_pred eeeccCCCCEEEEEcCCceE-EEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 2 CSVPLKGLLSLSVGTKSGYR-LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gfr-Iyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.+.+.+|+|-.+.|-++|-. +++++. -+.+|.. ....-+.-+-|+-|=.+|-.+..+ -++|||...+..|-|
T Consensus 197 t~~vSpDGslcasGgkdg~~~LwdL~~---~k~lysl-~a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~~v~~ 269 (315)
T KOG0279|consen 197 TVTVSPDGSLCASGGKDGEAMLWDLNE---GKNLYSL-EAFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKAVVEE 269 (315)
T ss_pred EEEECCCCCEEecCCCCceEEEEEccC---CceeEec-cCCCeEeeEEecCCceeEeeccCC-ceEEEeccchhhhhh
Confidence 36789999999999999854 455432 2333332 344456667777777777665443 389999998887754
No 95
>KOG2445|consensus
Probab=59.18 E-value=7.7 Score=30.05 Aligned_cols=18 Identities=39% Similarity=0.610 Sum_probs=15.6
Q ss_pred CEEEEEcCCceEEEecCC
Q psy6185 10 LSLSVGTKSGYRLFSLNS 27 (79)
Q Consensus 10 sc~~vgt~~GfrIyn~~~ 27 (79)
--+|||+++|.|||++.+
T Consensus 240 ~~lAvA~kDgv~I~~v~~ 257 (361)
T KOG2445|consen 240 HLLAVATKDGVRIFKVKV 257 (361)
T ss_pred eeEEEeecCcEEEEEEee
Confidence 359999999999999764
No 96
>KOG0278|consensus
Probab=58.28 E-value=13 Score=28.30 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=25.6
Q ss_pred CeeeccCCCCEEEEEcCCc-eEEEecCCcch
Q psy6185 1 MCSVPLKGLLSLSVGTKSG-YRLFSLNSIDT 30 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~G-frIyn~~~~d~ 30 (79)
.|++|.+|+--.|.|.++| .|+|...|-.+
T Consensus 271 hcVrFSPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 271 HCVRFSPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred EEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence 3899999999999999996 89998776544
No 97
>KOG1539|consensus
Probab=58.09 E-value=56 Score=28.37 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=38.3
Q ss_pred EEEEcCCceEEEecCC-cchhhe--eeeccCCCeEEEEEecccceEE-EeccCCCcEEEEEeCCCCeEEee
Q psy6185 12 LSVGTKSGYRLFSLNS-IDTLEQ--IYENSQEDVCIVERLFSSSLVA-VVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 12 ~~vgt~~GfrIyn~~~-~d~~~~--~~~~~~g~v~ivEmLf~snLla-lVg~~~prkL~I~d~~~~~~I~~ 78 (79)
+|+-.+.+.-||+... -++..+ .+.+..++- |.-.++-+-++= +|=|.+...|+|||.+++++|++
T Consensus 128 ia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~-Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~ 197 (910)
T KOG1539|consen 128 IAVDISNILFVWKTSSIQEELYLQSTFLKVEGDF-ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYT 197 (910)
T ss_pred EEEEccCcEEEEEeccccccccccceeeeccCCc-eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEE
Confidence 4555566777887433 122111 122222332 555666555442 22237788999999999999986
No 98
>KOG2079|consensus
Probab=57.78 E-value=23 Score=31.48 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=29.8
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCI 44 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~i 44 (79)
|++||||++-++.|...| ..+++.+.-++++...+......++
T Consensus 135 svafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 135 SVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 789999999999999998 5677654434555555543333333
No 99
>KOG2394|consensus
Probab=57.29 E-value=75 Score=26.46 Aligned_cols=73 Identities=11% Similarity=0.053 Sum_probs=41.4
Q ss_pred eeccCCCCEEEEEcCCce-EEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 3 SVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
..|..|+.-+|+-..+|| |||+-+..+-+ -...+=-|++--|--==.--+| ++||-+ .-|.||-+.-++.+++
T Consensus 296 f~FS~DG~~LA~VSqDGfLRvF~fdt~eLl-g~mkSYFGGLLCvcWSPDGKyI-vtGGED-DLVtVwSf~erRVVAR 369 (636)
T KOG2394|consen 296 FAFSPDGKYLATVSQDGFLRIFDFDTQELL-GVMKSYFGGLLCVCWSPDGKYI-VTGGED-DLVTVWSFEERRVVAR 369 (636)
T ss_pred eeEcCCCceEEEEecCceEEEeeccHHHHH-HHHHhhccceEEEEEcCCccEE-EecCCc-ceEEEEEeccceEEEe
Confidence 468889999999999987 89974332211 1112112333222211112223 245533 4788898888888774
No 100
>KOG0284|consensus
Probab=56.33 E-value=35 Score=27.38 Aligned_cols=68 Identities=15% Similarity=0.120 Sum_probs=50.3
Q ss_pred eeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 3 SVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
+.|-+++--+.+|+.+| |.++|-..+ .|+.+.+..+..|.-+|-+.+...+ |++..-..+++|+..-+
T Consensus 102 v~WtPeGRRLltgs~SGEFtLWNg~~f-nFEtilQaHDs~Vr~m~ws~~g~wm--iSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 102 VRWTPEGRRLLTGSQSGEFTLWNGTSF-NFETILQAHDSPVRTMKWSHNGTWM--ISGDKGGMIKYWQPNMN 170 (464)
T ss_pred EEEcCCCceeEeecccccEEEecCcee-eHHHHhhhhcccceeEEEccCCCEE--EEcCCCceEEecccchh
Confidence 56778889999999996 899985332 3455666677888888877776664 77766678888886544
No 101
>PF14976 FAM72: FAM72 protein
Probab=56.30 E-value=11 Score=25.97 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEecc-CCCcEEEEEe
Q psy6185 7 KGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-SSPRKLTKEE 69 (79)
Q Consensus 7 QD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~-~~prkL~I~d 69 (79)
||--|..+|..-||.|-- |+ ..+... -+.|+-=|.+++...|.--. .+...+.+|.
T Consensus 70 ~d~aC~~CGn~vGYhV~~--PC---~~Cl~s--cNNGH~wmFhs~~V~~~~R~~~sg~~~LlWg 126 (150)
T PF14976_consen 70 QDIACLGCGNIVGYHVVV--PC---SRCLSS--CNNGHFWMFHSSEVIASERLDSSGVNVLLWG 126 (150)
T ss_pred eeeeeecCCCeeeeEEEE--Ec---chHhcC--ccCCceEEEecceEEeeecccCCCCceEeec
Confidence 788899999999999974 44 333332 23445555555555544332 2334556664
No 102
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=56.29 E-value=97 Score=24.36 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=40.5
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCc-ch-hhe----eeec-------c-CCCeE-----------------EEEEecc
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSI-DT-LEQ----IYEN-------S-QEDVC-----------------IVERLFS 50 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~-d~-~~~----~~~~-------~-~g~v~-----------------ivEmLf~ 50 (79)
.+++|+.+..++|.-+..|-||...+. ++ +.. ++.. + ...+. -+|-+|-
T Consensus 37 ~ls~npngr~v~V~g~geY~iyt~~~~r~k~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~~If~ 116 (443)
T PF04053_consen 37 SLSHNPNGRFVLVCGDGEYEIYTALAWRNKAFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLPFSVEKIFG 116 (443)
T ss_dssp EEEE-TTSSEEEEEETTEEEEEETTTTEEEEEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----SS-EEEEE-
T ss_pred eEEECCCCCEEEEEcCCEEEEEEccCCcccccCceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcCCcccceEEc
Confidence 478999999999999999999973221 10 000 0100 0 11111 2555555
Q ss_pred cceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 51 SSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 51 snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
=.|+++- +.+.+.+||-.+++.|.+|
T Consensus 117 G~LL~~~---~~~~i~~yDw~~~~~i~~i 142 (443)
T PF04053_consen 117 GNLLGVK---SSDFICFYDWETGKLIRRI 142 (443)
T ss_dssp SSSEEEE---ETTEEEEE-TTT--EEEEE
T ss_pred CcEEEEE---CCCCEEEEEhhHcceeeEE
Confidence 4444443 3346899999999988875
No 103
>KOG2096|consensus
Probab=55.89 E-value=75 Score=25.07 Aligned_cols=21 Identities=29% Similarity=0.227 Sum_probs=17.4
Q ss_pred eeccCCCCEEEEEcCCceEEE
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLF 23 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIy 23 (79)
+.|-+|++.|.|...+|=.+|
T Consensus 138 V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 138 VVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred EEECCCcceEEEEEccCCEEE
Confidence 679999999999988875554
No 104
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=55.76 E-value=88 Score=23.68 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=38.0
Q ss_pred eeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 3 SVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
+.|.+|+.-+.|+..+| ..++++..-+.. ....-..++.+ +.+=..-.++ +|+.+.|+.+.|+|.++.+.+.+|
T Consensus 42 ~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v-~~i~~G~~~~~-i~~s~DG~~~-~v~n~~~~~v~v~D~~tle~v~~I 116 (369)
T PF02239_consen 42 LKFSPDGRYLYVANRDGTVSVIDLATGKVV-ATIKVGGNPRG-IAVSPDGKYV-YVANYEPGTVSVIDAETLEPVKTI 116 (369)
T ss_dssp EE-TT-SSEEEEEETTSEEEEEETTSSSEE-EEEE-SSEEEE-EEE--TTTEE-EEEEEETTEEEEEETTT--EEEEE
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCcccEE-EEEecCCCcce-EEEcCCCCEE-EEEecCCCceeEeccccccceeec
Confidence 45788888877777665 445543221111 11111122222 2222233444 567788899999999998888764
No 105
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=55.63 E-value=74 Score=24.80 Aligned_cols=26 Identities=8% Similarity=-0.031 Sum_probs=19.4
Q ss_pred ccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 50 SSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 50 ~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
...++..+. --++|+|||.+++..+.
T Consensus 229 ~~~~l~tl~--~D~~LRiW~l~t~~~~~ 254 (547)
T PF11715_consen 229 DDTFLFTLS--RDHTLRIWSLETGQCLA 254 (547)
T ss_dssp TTTEEEEEE--TTSEEEEEETTTTCEEE
T ss_pred CCCEEEEEe--CCCeEEEEECCCCeEEE
Confidence 456666663 44899999999998764
No 106
>KOG1036|consensus
Probab=54.99 E-value=27 Score=26.85 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=42.7
Q ss_pred CeeeccCCCCEEEEEcCCceEEEecCCcchh----heeee-----ccCCCeEEEEEecccceEE-------EeccCCCcE
Q psy6185 1 MCSVPLKGLLSLSVGTKSGYRLFSLNSIDTL----EQIYE-----NSQEDVCIVERLFSSSLVA-------VVSLSSPRK 64 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~----~~~~~-----~~~g~v~ivEmLf~snLla-------lVg~~~prk 64 (79)
+|+.++|.+.-+++++-+| ||+- +=+|+- ++.|. ...++. |..|--|=+| ++.|-+-..
T Consensus 181 R~v~~~pn~eGy~~sSieG-RVav-E~~d~s~~~~skkyaFkCHr~~~~~~---~~~yPVNai~Fhp~~~tfaTgGsDG~ 255 (323)
T KOG1036|consen 181 RCVALVPNGEGYVVSSIEG-RVAV-EYFDDSEEAQSKKYAFKCHRLSEKDT---EIIYPVNAIAFHPIHGTFATGGSDGI 255 (323)
T ss_pred EEEEEecCCCceEEEeecc-eEEE-EccCCchHHhhhceeEEeeecccCCc---eEEEEeceeEeccccceEEecCCCce
Confidence 4788888888889998888 5541 012221 11111 112332 2223333333 233455679
Q ss_pred EEEEeCCCCeEEeeC
Q psy6185 65 LTKEEGKNEEEEKKI 79 (79)
Q Consensus 65 L~I~d~~~~~~I~~~ 79 (79)
|.+||...++.|+++
T Consensus 256 V~~Wd~~~rKrl~q~ 270 (323)
T KOG1036|consen 256 VNIWDLFNRKRLKQL 270 (323)
T ss_pred EEEccCcchhhhhhc
Confidence 999999999988874
No 107
>KOG0319|consensus
Probab=54.92 E-value=58 Score=27.83 Aligned_cols=59 Identities=27% Similarity=0.226 Sum_probs=39.6
Q ss_pred ccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccc-eEEEeccCCCcEEEEE
Q psy6185 5 PLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTKE 68 (79)
Q Consensus 5 fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn-LlalVg~~~prkL~I~ 68 (79)
++++-+-++|||++ -+|+|++...+ ..++....+.|--.- .++++ |+|- +...+++++|
T Consensus 332 lG~e~~~laVATNs~~lr~y~~~~~~--c~ii~GH~e~vlSL~-~~~~g~llat--~sKD~svilW 392 (775)
T KOG0319|consen 332 LGPEESHLAVATNSPELRLYTLPTSY--CQIIPGHTEAVLSLD-VWSSGDLLAT--GSKDKSVILW 392 (775)
T ss_pred cCCccceEEEEeCCCceEEEecCCCc--eEEEeCchhheeeee-ecccCcEEEE--ecCCceEEEE
Confidence 57788999999999 79999864432 124554444443222 67888 4443 3566899999
No 108
>KOG0267|consensus
Probab=54.34 E-value=21 Score=30.50 Aligned_cols=73 Identities=12% Similarity=0.082 Sum_probs=52.4
Q ss_pred eeeccCCCCEEEEEcC-CceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTK-SGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~-~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
++.|.+|+--.+.|.+ .-.+||+.. -..+-..|....|.+-.+| ++-.+.+ +-.|.+-+.+++||-++-..|-
T Consensus 159 ~l~lsP~Gr~v~~g~ed~tvki~d~~-agk~~~ef~~~e~~v~sle-~hp~e~L-la~Gs~d~tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 159 VLRLSPDGRWVASGGEDNTVKIWDLT-AGKLSKEFKSHEGKVQSLE-FHPLEVL-LAPGSSDRTVRFWDLETFEVIS 232 (825)
T ss_pred EEeecCCCceeeccCCcceeeeeccc-ccccccccccccccccccc-cCchhhh-hccCCCCceeeeeccceeEEee
Confidence 6789999999999999 689999742 2233344565668888888 5555443 4455677999999998766664
No 109
>KOG0315|consensus
Probab=53.95 E-value=97 Score=23.63 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=41.3
Q ss_pred eccCCCCEEEEEc-CCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 4 VPLKGLLSLSVGT-KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 4 ~fNQD~sc~~vgt-~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.|.+|..-+|.+. +.-.+|||++.+-++++..+. +.-=.-.--|+.-===||-+.+-+..++||...++++.
T Consensus 222 ~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~g--h~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~ 294 (311)
T KOG0315|consen 222 LLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTG--HQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVR 294 (311)
T ss_pred EECCCCcEEEeecCCceEEEEecCCceeeEEEeec--CCceEEeeeeccCccEEEecCCCCceeecccccCceee
Confidence 4888999887655 458999997654122222221 21111112223222223555666899999999888775
No 110
>KOG0639|consensus
Probab=53.91 E-value=19 Score=29.89 Aligned_cols=71 Identities=10% Similarity=0.076 Sum_probs=45.8
Q ss_pred eeccCCCC-EEEEEcCCceEEEecCCcchhheeeec-cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 3 SVPLKGLL-SLSVGTKSGYRLFSLNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 3 ~~fNQD~s-c~~vgt~~GfrIyn~~~~d~~~~~~~~-~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+.-|.|.. ||+|.++.-.+||++.+ +.+-+.|.. .+|.-+|.=-=.-|+|. .||.+ |.|+-||-+.++.+.
T Consensus 515 La~spDakvcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtklW--TGGlD-ntvRcWDlregrqlq 587 (705)
T KOG0639|consen 515 LAISPDAKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTKLW--TGGLD-NTVRCWDLREGRQLQ 587 (705)
T ss_pred hhcCCccceeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCceee--cCCCc-cceeehhhhhhhhhh
Confidence 34566754 99999999999998765 222233443 34444554433456655 45554 899999988776654
No 111
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=53.84 E-value=16 Score=18.16 Aligned_cols=15 Identities=40% Similarity=0.667 Sum_probs=10.1
Q ss_pred CCEEEEEcCCce-EEE
Q psy6185 9 LLSLSVGTKSGY-RLF 23 (79)
Q Consensus 9 ~sc~~vgt~~Gf-rIy 23 (79)
.+-++|+|..+| |||
T Consensus 11 ~~~vavaTS~~~lRif 26 (27)
T PF12341_consen 11 DSWVAVATSAGYLRIF 26 (27)
T ss_pred CCEEEEEeCCCeEEec
Confidence 346778888765 666
No 112
>KOG2106|consensus
Probab=53.66 E-value=78 Score=26.26 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=41.5
Q ss_pred CeeeccCCCCEEEEEcCCce-EEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCC
Q psy6185 1 MCSVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~ 71 (79)
+|+.|-.++--+ .|..+|+ .||+.... .+.+.-.-..|||.-.-||-.--|+. |+. .||+..||+.
T Consensus 250 l~v~F~engdvi-TgDS~G~i~Iw~~~~~-~~~k~~~aH~ggv~~L~~lr~GtllS--GgK-DRki~~Wd~~ 316 (626)
T KOG2106|consen 250 LCVTFLENGDVI-TGDSGGNILIWSKGTN-RISKQVHAHDGGVFSLCMLRDGTLLS--GGK-DRKIILWDDN 316 (626)
T ss_pred EEEEEcCCCCEE-eecCCceEEEEeCCCc-eEEeEeeecCCceEEEEEecCccEee--cCc-cceEEecccc
Confidence 366777666644 3455554 56753211 11221114689999999998888876 655 4999999943
No 113
>KOG1517|consensus
Probab=52.45 E-value=61 Score=29.23 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=45.8
Q ss_pred cCCCCEEEEEcCCc-eEEEecCC-c-chhheeeec---------cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 6 LKGLLSLSVGTKSG-YRLFSLNS-I-DTLEQIYEN---------SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 6 NQD~sc~~vgt~~G-frIyn~~~-~-d~~~~~~~~---------~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
-||.+-+.+|+.+| .|||.-.+ . ++.+....- ..|.=.+++-.-.+-.+-.-|. -|.++|||..+.
T Consensus 1120 e~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd--~r~IRIWDa~~E 1197 (1387)
T KOG1517|consen 1120 EQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGD--VRSIRIWDAHKE 1197 (1387)
T ss_pred ccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCC--eeEEEEEecccc
Confidence 36778888888886 69996322 1 343432211 1121266677777777755443 589999999998
Q ss_pred eEEeeC
Q psy6185 74 EEEKKI 79 (79)
Q Consensus 74 ~~I~~~ 79 (79)
....+|
T Consensus 1198 ~~~~di 1203 (1387)
T KOG1517|consen 1198 QVVADI 1203 (1387)
T ss_pred eeEeec
Confidence 877654
No 114
>KOG4547|consensus
Probab=52.38 E-value=1.1e+02 Score=25.28 Aligned_cols=71 Identities=7% Similarity=0.004 Sum_probs=34.9
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcc-hhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d-~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
++..+|+.+||-.+-.++--+| +++-+ ...+........+.-....-..-.++. +.|.+++||.+.++.+.
T Consensus 107 ~~~~~~~~~ciyS~~ad~~v~~-~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~----as~~ik~~~~~~kevv~ 178 (541)
T KOG4547|consen 107 EILDAQRLGCIYSVGADLKVVY-ILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT----ASRQIKVLDIETKEVVI 178 (541)
T ss_pred eeecccccCceEecCCceeEEE-EecccceeeeeeccCCCccceEEEcCCCCEEEe----ccceEEEEEccCceEEE
Confidence 6778999999877666653333 11111 101111111111211111111112322 34899999999988764
No 115
>KOG0308|consensus
Probab=51.60 E-value=1.1e+02 Score=26.11 Aligned_cols=73 Identities=11% Similarity=0.022 Sum_probs=41.8
Q ss_pred eeeccCCCCEEEEE-cCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVG-TKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vg-t~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.++-||-++-|+.| |+.-.|+|++....+.. .+......|..+-..-...= ++++.+-..+++||-..++.+.
T Consensus 176 SLA~N~t~t~ivsGgtek~lr~wDprt~~kim-kLrGHTdNVr~ll~~dDGt~--~ls~sSDgtIrlWdLgqQrCl~ 249 (735)
T KOG0308|consen 176 SLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIM-KLRGHTDNVRVLLVNDDGTR--LLSASSDGTIRLWDLGQQRCLA 249 (735)
T ss_pred eeecCCcceEEEecCcccceEEecccccccee-eeeccccceEEEEEcCCCCe--EeecCCCceEEeeeccccceee
Confidence 46678888877665 55578999754432211 12223334433322221111 2345777899999999888764
No 116
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=51.21 E-value=1.1e+02 Score=23.45 Aligned_cols=75 Identities=4% Similarity=-0.122 Sum_probs=43.7
Q ss_pred ccCCCCEEEEEcC-----------CceEEEecCCcchhheeeecc-----CCCeEEEEEecccceEEEeccCC-CcEEEE
Q psy6185 5 PLKGLLSLSVGTK-----------SGYRLFSLNSIDTLEQIYENS-----QEDVCIVERLFSSSLVAVVSLSS-PRKLTK 67 (79)
Q Consensus 5 fNQD~sc~~vgt~-----------~GfrIyn~~~~d~~~~~~~~~-----~g~v~ivEmLf~snLlalVg~~~-prkL~I 67 (79)
+++|++-+.++.. +-..||+.....+..++-... .+..-..=-|-...=.++|...+ .+.|.|
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 6788888877776 578888755433322221100 01111111122233344565545 689999
Q ss_pred EeCCCCeEEeeC
Q psy6185 68 EEGKNEEEEKKI 79 (79)
Q Consensus 68 ~d~~~~~~I~~~ 79 (79)
+|..+++.+.||
T Consensus 133 vD~~~~kvv~ei 144 (352)
T TIGR02658 133 VDLEGKAFVRMM 144 (352)
T ss_pred EECCCCcEEEEE
Confidence 999999999886
No 117
>KOG2314|consensus
Probab=51.19 E-value=77 Score=26.62 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=48.0
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEecc---------CCCcEEEEEeCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL---------SSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~---------~~prkL~I~d~~~ 72 (79)
.+.|.+-+|.++.-+..|..++.=+..+.+.+.++ .+|..++-==.-++|+--+. ..+..|.|||..+
T Consensus 215 yv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~H---p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t 291 (698)
T KOG2314|consen 215 YVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFYH---PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT 291 (698)
T ss_pred eEEecCCceEEEEEeccceeeecCccHHHHHhccC---CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccc
Confidence 57899999999999999999996433444333333 45556554444455544443 2447999999988
Q ss_pred CeE
Q psy6185 73 EEE 75 (79)
Q Consensus 73 ~~~ 75 (79)
|..
T Consensus 292 G~l 294 (698)
T KOG2314|consen 292 GLL 294 (698)
T ss_pred cch
Confidence 764
No 118
>KOG1188|consensus
Probab=51.05 E-value=49 Score=25.92 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=38.3
Q ss_pred CEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 10 LSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 10 sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
+-++||..+ -.|+|+...-..+++ +.-..+-+..+..+-.++.=.+.++.+...+++||.+.+.++..|
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~-fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~ 110 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEE-FKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARI 110 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhhe-ecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhe
Confidence 558888888 589998543222232 221122222222233223333334466679999999988776553
No 119
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=50.94 E-value=88 Score=22.27 Aligned_cols=70 Identities=9% Similarity=-0.049 Sum_probs=38.0
Q ss_pred eeeccCCCCEEEEEcC--CceEEEecCCcchhheeeec-cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 2 CSVPLKGLLSLSVGTK--SGYRLFSLNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~--~GfrIyn~~~~d~~~~~~~~-~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
.+.|++|+..+.+|.. .+..+|+++....+...-.. ..+....+-.--..+++.. +.+..+++.+||..+
T Consensus 39 ~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v-~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 39 PMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFS-ASYNANCVSVSPLDK 111 (330)
T ss_pred cEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEE-EEcCCCeEEEEEECC
Confidence 4678999999887754 57777876421122211111 1223333333323444433 335568999998753
No 120
>KOG0281|consensus
Probab=50.10 E-value=37 Score=27.08 Aligned_cols=59 Identities=15% Similarity=0.103 Sum_probs=39.7
Q ss_pred EEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 12 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 12 ~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
+++..+.-.|+++..+++ |-++.. ...-||+-.-|+--|+ |+|.+.+.+++||...|..
T Consensus 334 VsASgDRTikvW~~st~e-fvRtl~--gHkRGIAClQYr~rlv--VSGSSDntIRlwdi~~G~c 392 (499)
T KOG0281|consen 334 VSASGDRTIKVWSTSTCE-FVRTLN--GHKRGIACLQYRDRLV--VSGSSDNTIRLWDIECGAC 392 (499)
T ss_pred EEecCCceEEEEecccee-eehhhh--cccccceehhccCeEE--EecCCCceEEEEeccccHH
Confidence 444455578999865433 112222 2344677778888886 8899999999999887653
No 121
>KOG0305|consensus
Probab=49.71 E-value=1.1e+02 Score=24.81 Aligned_cols=66 Identities=20% Similarity=0.170 Sum_probs=44.1
Q ss_pred CEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEee
Q psy6185 10 LSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 10 sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~~ 78 (79)
.-+|||.....-+++-.. .+.....+...+.+.-|--=.+-+.||+ | ..-..|.|||-+.++.+.+
T Consensus 189 n~laValg~~vylW~~~s-~~v~~l~~~~~~~vtSv~ws~~G~~Lav-G-~~~g~v~iwD~~~~k~~~~ 254 (484)
T KOG0305|consen 189 NVLAVALGQSVYLWSASS-GSVTELCSFGEELVTSVKWSPDGSHLAV-G-TSDGTVQIWDVKEQKKTRT 254 (484)
T ss_pred CeEEEEecceEEEEecCC-CceEEeEecCCCceEEEEECCCCCEEEE-e-ecCCeEEEEehhhcccccc
Confidence 358999999888887332 2323333333566777766666777775 4 5557999999888776654
No 122
>KOG1539|consensus
Probab=49.16 E-value=64 Score=28.04 Aligned_cols=65 Identities=14% Similarity=0.081 Sum_probs=40.4
Q ss_pred eeeccCCCCE-EEEEcCCc-eEEEecCCcchhheeee-ccCCCeEEEEEecccceEEEeccCCCcEEEEEe
Q psy6185 2 CSVPLKGLLS-LSVGTKSG-YRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEE 69 (79)
Q Consensus 2 ~~~fNQD~sc-~~vgt~~G-frIyn~~~~d~~~~~~~-~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d 69 (79)
.+||--|+.- +|+|...| ..+|+++. .++..... ...|++.-.+-|-.--++ |++.+.|.|++|=
T Consensus 249 slSFrtDG~p~las~~~~G~m~~wDLe~-kkl~~v~~nah~~sv~~~~fl~~epVl--~ta~~DnSlk~~v 316 (910)
T KOG1539|consen 249 SLSFRTDGNPLLASGRSNGDMAFWDLEK-KKLINVTRNAHYGSVTGATFLPGEPVL--VTAGADNSLKVWV 316 (910)
T ss_pred EEEeccCCCeeEEeccCCceEEEEEcCC-CeeeeeeeccccCCcccceecCCCceE--eeccCCCceeEEE
Confidence 3677777764 77888889 66777543 12222222 245788888877777665 5555556666664
No 123
>KOG1274|consensus
Probab=49.07 E-value=99 Score=27.06 Aligned_cols=71 Identities=4% Similarity=-0.092 Sum_probs=40.3
Q ss_pred eeccCC-CCEEEEEcCCceEEEecCCcchhheeeeccCCC-eEEEEEecccc--eEEEeccCCCcEEEEEeCC------C
Q psy6185 3 SVPLKG-LLSLSVGTKSGYRLFSLNSIDTLEQIYENSQED-VCIVERLFSSS--LVAVVSLSSPRKLTKEEGK------N 72 (79)
Q Consensus 3 ~~fNQD-~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~-v~ivEmLf~sn--LlalVg~~~prkL~I~d~~------~ 72 (79)
++|.+| ++-.+.+.++-.++|+.+.-++........... +..+ =|+.| +||-. .--+.+.|||.+ .
T Consensus 194 ~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~--~wsPnG~YiAAs--~~~g~I~vWnv~t~~~~~~ 269 (933)
T KOG1274|consen 194 LAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDL--QWSPNGKYIAAS--TLDGQILVWNVDTHERHEF 269 (933)
T ss_pred eeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEE--EEcCCCcEEeee--ccCCcEEEEecccchhccc
Confidence 578888 556667788889999865533322211111111 2222 23333 34333 344799999988 6
Q ss_pred CeEEe
Q psy6185 73 EEEEK 77 (79)
Q Consensus 73 ~~~I~ 77 (79)
++.||
T Consensus 270 ~~~Vc 274 (933)
T KOG1274|consen 270 KRAVC 274 (933)
T ss_pred cceeE
Confidence 66665
No 124
>KOG0295|consensus
Probab=48.50 E-value=86 Score=24.83 Aligned_cols=75 Identities=7% Similarity=-0.085 Sum_probs=40.4
Q ss_pred eeccCCCCEEEEEcCC-ceEEEecCCcchhheeeecc---CCCeEEEEEecccceE----------EEeccCCCcEEEEE
Q psy6185 3 SVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENS---QEDVCIVERLFSSSLV----------AVVSLSSPRKLTKE 68 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~---~g~v~ivEmLf~snLl----------alVg~~~prkL~I~ 68 (79)
+.-|||++-+|.+.++ =.+++-..+- .++..++.. .+-+..+---+.+++- .++++.-.+.+++|
T Consensus 241 v~v~~DGti~As~s~dqtl~vW~~~t~-~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~w 319 (406)
T KOG0295|consen 241 VRVNQDGTIIASCSNDQTLRVWVVATK-QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIW 319 (406)
T ss_pred EEecCCeeEEEecCCCceEEEEEeccc-hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEE
Confidence 5679999999877666 8899964432 112222221 1222222111111111 11222445899999
Q ss_pred eCCCCeEEee
Q psy6185 69 EGKNEEEEKK 78 (79)
Q Consensus 69 d~~~~~~I~~ 78 (79)
|..++..+-+
T Consensus 320 dv~tg~cL~t 329 (406)
T KOG0295|consen 320 DVSTGMCLFT 329 (406)
T ss_pred eccCCeEEEE
Confidence 9999876643
No 125
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=47.25 E-value=36 Score=16.72 Aligned_cols=19 Identities=5% Similarity=0.024 Sum_probs=11.5
Q ss_pred CCCcEEEEEeCCCCeEEee
Q psy6185 60 SSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 60 ~~prkL~I~d~~~~~~I~~ 78 (79)
...+.|.++|.++++.+.+
T Consensus 11 ~~~~~v~~id~~~~~~~~~ 29 (42)
T TIGR02276 11 SGSNTVSVIDTATNKVIAT 29 (42)
T ss_pred CCCCEEEEEECCCCeEEEE
Confidence 4456666777666665544
No 126
>KOG0275|consensus
Probab=46.57 E-value=22 Score=28.11 Aligned_cols=71 Identities=18% Similarity=0.194 Sum_probs=41.1
Q ss_pred eeeccCCCCEEE-EEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLLSLS-VGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~sc~~-vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
|++|..|+|-+. .+.+.-.||..++.=..+++ ++ ..+-.+-|.-|...==-+++..+...++|||-|+...
T Consensus 311 ~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKE-fr--GHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC 382 (508)
T KOG0275|consen 311 CLSFSRDNSQILSASFDQTVRIHGLKSGKCLKE-FR--GHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTEC 382 (508)
T ss_pred EEEEccCcchhhcccccceEEEeccccchhHHH-hc--CccccccceEEcCCCCeEEEecCCccEEEecCcchhh
Confidence 789999998654 44455778876543111221 11 1222333444444333345667888999999987653
No 127
>KOG2114|consensus
Probab=46.20 E-value=42 Score=29.15 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=36.0
Q ss_pred ccCCCCEEEEEcCCc-eEEEecCCcchhhee--eeccCCC-eEEEEEecccceEEEecc---CCCcEEEEEeCCC
Q psy6185 5 PLKGLLSLSVGTKSG-YRLFSLNSIDTLEQI--YENSQED-VCIVERLFSSSLVAVVSL---SSPRKLTKEEGKN 72 (79)
Q Consensus 5 fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~--~~~~~g~-v~ivEmLf~snLlalVg~---~~prkL~I~d~~~ 72 (79)
|......+++|+..| ..++| . .+... +.....+ +.+...+-.+|+++-||. -+|-.|+|||..+
T Consensus 31 ~~s~~~~vvigt~~G~V~~Ln--~--s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek 101 (933)
T KOG2114|consen 31 CSSSTGSVVIGTADGRVVILN--S--SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK 101 (933)
T ss_pred EcCCCceEEEeeccccEEEec--c--cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence 344455688888885 44444 2 12221 2222233 334444445567888874 3677999999654
No 128
>KOG4532|consensus
Probab=46.06 E-value=16 Score=27.98 Aligned_cols=45 Identities=9% Similarity=0.180 Sum_probs=30.5
Q ss_pred eeeccCCCCEEEEEcCCce-EEEecCCcc-hhheeee-c--cCCCeEEEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGY-RLFSLNSID-TLEQIYE-N--SQEDVCIVE 46 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d-~~~~~~~-~--~~g~v~ivE 46 (79)
|.||||-..-||||+.+|+ .||++...- |-...-+ + ..|.+..+.
T Consensus 208 ~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~ 257 (344)
T KOG4532|consen 208 YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCR 257 (344)
T ss_pred eeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEE
Confidence 7899999999999999986 688866542 3222111 1 356666654
No 129
>KOG0281|consensus
Probab=43.61 E-value=45 Score=26.61 Aligned_cols=60 Identities=17% Similarity=0.139 Sum_probs=35.8
Q ss_pred EEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 13 SVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 13 ~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
..|.++ -.+|++.+..+- ...+....|+|--.+-=-| .+|+|.+.-.++|||..+++.+.
T Consensus 211 VSGlrDnTikiWD~n~~~c-~~~L~GHtGSVLCLqyd~r----viisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 211 VSGLRDNTIKIWDKNSLEC-LKILTGHTGSVLCLQYDER----VIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred hcccccCceEEeccccHHH-HHhhhcCCCcEEeeeccce----EEEecCCCceEEEEeccCCchhh
Confidence 334443 678886543221 1223334566544332222 57888888999999999988753
No 130
>KOG0269|consensus
Probab=43.20 E-value=85 Score=27.07 Aligned_cols=72 Identities=14% Similarity=0.080 Sum_probs=41.3
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEE-EecccceEEEeccCCCcEEEEEeCCC
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVE-RLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivE-mLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+|++|++++.-+|.|-.+ =.+||+...-.+..++.-....+++-|. +=-+++.||.-+--..--+.|||..+
T Consensus 224 ~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269|consen 224 LCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred EEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeecc
Confidence 589999999999999877 5899975322222222222223333222 11234555543333334678888765
No 131
>PF13645 YkuD_2: L,D-transpeptidase catalytic domain
Probab=42.72 E-value=62 Score=22.66 Aligned_cols=30 Identities=7% Similarity=0.237 Sum_probs=24.1
Q ss_pred ecccceEEEecc---CCCcEEEEEeCCCCeEEe
Q psy6185 48 LFSSSLVAVVSL---SSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 48 Lf~snLlalVg~---~~prkL~I~d~~~~~~I~ 77 (79)
+.++.++++|.= ...+++-|||.++++.+-
T Consensus 31 ~~~~~~l~iIDfs~pS~~~R~~v~Dl~~~~~l~ 63 (176)
T PF13645_consen 31 IYNKDILTIIDFSKPSGEKRFFVIDLKKGKLLY 63 (176)
T ss_pred CCCCCeEEEEECCCCCCCCeEEEEECCCCEEEE
Confidence 348899999974 444899999999998764
No 132
>PHA00692 hypothetical protein
Probab=42.69 E-value=16 Score=21.80 Aligned_cols=24 Identities=21% Similarity=0.253 Sum_probs=21.2
Q ss_pred CeeeccCCCCEEEEEcCCceEEEe
Q psy6185 1 MCSVPLKGLLSLSVGTKSGYRLFS 24 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~GfrIyn 24 (79)
||..|..|.+-..|--..|||.=.
T Consensus 22 mcarfhedrthyfveyppgfrfgg 45 (74)
T PHA00692 22 MCARFHEDRTHYFVEYPPGFRFGG 45 (74)
T ss_pred hhhhhcccceeEeEecCCCccccc
Confidence 689999999999999999999543
No 133
>KOG3881|consensus
Probab=42.26 E-value=94 Score=24.72 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=45.0
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
|++--|++.-+.+|...| ...|+...-......+..-.|++.-+...-.--++|.+| .+ |-|+|+|.++.+.|-
T Consensus 252 ~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~G-LD-RyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 252 STGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCG-LD-RYVRIHDIKTRKLLH 326 (412)
T ss_pred eeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeec-cc-eeEEEeecccchhhh
Confidence 344445555666666553 344443221111112444568888888777667898887 43 889999999866553
No 134
>PF02960 K1: K1 glycoprotein; InterPro: IPR004121 Current genotyping systems for Human herpesvirus 8 (HHV-8) are based on the highly variable gene encoding the K1 glycoprotein []. This entry represents the C-terminal region of the K1 glycoprotein.
Probab=41.73 E-value=81 Score=21.08 Aligned_cols=49 Identities=31% Similarity=0.446 Sum_probs=33.6
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccce
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL 53 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snL 53 (79)
|.+.-+.-.-++|...+|||-|+.+. +-.+.......+..+|-..++|.
T Consensus 16 CaNitpeThTVSVSSTTGFrTfsTn~---lvnIi~aTth~vvvvkEakstn~ 64 (130)
T PF02960_consen 16 CANITPETHTVSVSSTTGFRTFSTNS---LVNIIHATTHDVVVVKEAKSTNP 64 (130)
T ss_pred cCCCCCCCcccccccccceEEEeccc---ccceecccccceEEEEEeecCCc
Confidence 45555666678999999999998654 22233444567777777777774
No 135
>KOG0649|consensus
Probab=40.79 E-value=30 Score=26.36 Aligned_cols=19 Identities=5% Similarity=0.015 Sum_probs=15.0
Q ss_pred CCCcEEEEEeCCCCeEEee
Q psy6185 60 SSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 60 ~~prkL~I~d~~~~~~I~~ 78 (79)
.....++|||+|+++++.-
T Consensus 175 ~EDGtvRvWd~kt~k~v~~ 193 (325)
T KOG0649|consen 175 AEDGTVRVWDTKTQKHVSM 193 (325)
T ss_pred CCCccEEEEeccccceeEE
Confidence 3446899999999988753
No 136
>KOG0315|consensus
Probab=40.72 E-value=1.6e+02 Score=22.43 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=39.5
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcch-hheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDT-LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~-~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+..-+|..-+|+|-..-.|+|+++.-.| -...|+...+.|..|---..--.+ ..+.....++|||-+.
T Consensus 46 LeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWM--yTgseDgt~kIWdlR~ 114 (311)
T KOG0315|consen 46 LEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWM--YTGSEDGTVKIWDLRS 114 (311)
T ss_pred EEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEE--EecCCCceEEEEeccC
Confidence 3456788889999999999998876433 133455444444443211111111 1124456888888764
No 137
>KOG1272|consensus
Probab=40.70 E-value=81 Score=25.83 Aligned_cols=65 Identities=20% Similarity=0.149 Sum_probs=43.2
Q ss_pred ccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 5 PLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 5 fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
=|+-+.-+.+|..+| ...|+-+.-+|+-+.+- ..|+|+-++.=-.-.++|--| ..|+++|||-..
T Consensus 259 qNP~NaVih~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaTtG--~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 259 QNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMATTG--LDRKVKIWDLRN 324 (545)
T ss_pred cCCccceEEEcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEeecc--cccceeEeeecc
Confidence 477778888999987 46776333477765322 246666666555566776665 338999999764
No 138
>KOG1446|consensus
Probab=40.02 E-value=1.7e+02 Score=22.46 Aligned_cols=54 Identities=15% Similarity=-0.012 Sum_probs=37.4
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEE
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 56 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlal 56 (79)
++.|..|+-++++.+++ -.++|++..-.+ .+......-|+-.++-.+-+|-+-.
T Consensus 19 sl~fs~~G~~litss~dDsl~LYd~~~g~~-~~ti~skkyG~~~~~Fth~~~~~i~ 73 (311)
T KOG1446|consen 19 SLDFSDDGLLLITSSEDDSLRLYDSLSGKQ-VKTINSKKYGVDLACFTHHSNTVIH 73 (311)
T ss_pred EEEecCCCCEEEEecCCCeEEEEEcCCCce-eeEeecccccccEEEEecCCceEEE
Confidence 68899999998886666 999999754322 2334444567777777776665543
No 139
>KOG0292|consensus
Probab=39.91 E-value=1.1e+02 Score=27.26 Aligned_cols=72 Identities=17% Similarity=0.032 Sum_probs=48.0
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
.+||-+-..=+.+++-+| .+.|+-. +..+-..|+..+|+|.=|--=-+--| +|+|-+.-|+++||-|+++.+
T Consensus 14 glsFHP~rPwILtslHsG~IQlWDYR-M~tli~rFdeHdGpVRgv~FH~~qpl--FVSGGDDykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 14 GLSFHPKRPWILTSLHSGVIQLWDYR-MGTLIDRFDEHDGPVRGVDFHPTQPL--FVSGGDDYKIKVWNYKTRRCL 86 (1202)
T ss_pred ceecCCCCCEEEEeecCceeeeehhh-hhhHHhhhhccCCccceeeecCCCCe--EEecCCccEEEEEecccceeh
Confidence 478888888888998887 3444311 22333345556788866543333333 478877789999999988865
No 140
>KOG4283|consensus
Probab=39.72 E-value=1.8e+02 Score=22.81 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=41.3
Q ss_pred EEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 12 LSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 12 ~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
+|+||++ -.|+-++. ..-|.+.++...++|--||-==++-++---| .+...+++||.++-
T Consensus 161 iA~gtr~~~VrLCDi~-SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatg-saDg~irlWDiRra 221 (397)
T KOG4283|consen 161 IAAGTRDVQVRLCDIA-SGSFSHTLSGHRDGVLAVEWSPSSEWVLATG-SADGAIRLWDIRRA 221 (397)
T ss_pred EEEecCCCcEEEEecc-CCcceeeeccccCceEEEEeccCceeEEEec-CCCceEEEEEeecc
Confidence 5566655 45555432 2456667777788999999887777775555 56678899998764
No 141
>KOG0300|consensus
Probab=39.47 E-value=1.1e+02 Score=24.23 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=31.3
Q ss_pred EEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 13 SVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 13 ~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
...-++-||+|+-.+.-+--..|+...+.|.- ..|.+..= +|++.+.|.++|||-++
T Consensus 331 TsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS--~vF~~dd~-vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 331 TSSRDTTFRLWDFREAIQSVAVFQGHTDTVTS--VVFNTDDR-VVSGSDDRTVKVWDLRN 387 (481)
T ss_pred EeccCceeEeccchhhcceeeeecccccceeE--EEEecCCc-eeecCCCceEEEeeecc
Confidence 33445588888633321212234433333322 22333332 46779999999999876
No 142
>KOG0301|consensus
Probab=38.72 E-value=2.5e+02 Score=24.10 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=37.0
Q ss_pred eeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCC
Q psy6185 3 SVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~ 71 (79)
+.+=.|.+-++|+.+.-.|.++.+. +-+. .+.....=+..+-|..+..+++--| --|+|+||+..
T Consensus 185 L~vl~~~~flScsNDg~Ir~w~~~g-e~l~-~~~ghtn~vYsis~~~~~~~Ivs~g--EDrtlriW~~~ 249 (745)
T KOG0301|consen 185 LAVLDDSHFLSCSNDGSIRLWDLDG-EVLL-EMHGHTNFVYSISMALSDGLIVSTG--EDRTLRIWKKD 249 (745)
T ss_pred eEEecCCCeEeecCCceEEEEeccC-ceee-eeeccceEEEEEEecCCCCeEEEec--CCceEEEeecC
Confidence 3444556667777777777776421 1111 1222333444455777777764444 45899999865
No 143
>PF13285 DUF4073: Domain of unknown function (DUF4073)
Probab=38.36 E-value=79 Score=21.94 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=33.4
Q ss_pred EcCCceEEEecCCcchhheeeec-cCCCeEEEE--EecccceEEEeccCCCcEEE--EEeCCCCeEEee
Q psy6185 15 GTKSGYRLFSLNSIDTLEQIYEN-SQEDVCIVE--RLFSSSLVAVVSLSSPRKLT--KEEGKNEEEEKK 78 (79)
Q Consensus 15 gt~~GfrIyn~~~~d~~~~~~~~-~~g~v~ivE--mLf~snLlalVg~~~prkL~--I~d~~~~~~I~~ 78 (79)
|.++||.|.|...++. ...+. ..|+=.++- --|..-|=+-|. . ++|+ =||+++++.|.+
T Consensus 15 gd~~GFtVVNTg~Iet--g~~~dGp~ggE~~~p~~~~f~qGL~V~vy--~-drV~v~A~Df~~~~~Ikk 78 (158)
T PF13285_consen 15 GDERGFTVVNTGAIET--GWTSDGPDGGEKTDPDGESFKQGLQVEVY--G-DRVVVEARDFKRGKWIKK 78 (158)
T ss_pred CCCCCcEEEeccceec--cccCCCCCCCcEecccccccccceEEEEe--C-CeEEEEEEeccCCcchhe
Confidence 3456999999654432 11121 123322321 125677776664 2 3444 499999999876
No 144
>PRK03629 tolB translocation protein TolB; Provisional
Probab=37.56 E-value=1.8e+02 Score=22.08 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=37.2
Q ss_pred eeeccCCCCEEEEEcCC-c-eEEEecCCcc-hhheeeeccCCCeEEEEEecccceEEEecc-CCCcEEEEEeCCCCe
Q psy6185 2 CSVPLKGLLSLSVGTKS-G-YRLFSLNSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSL-SSPRKLTKEEGKNEE 74 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-G-frIyn~~~~d-~~~~~~~~~~g~v~ivEmLf~snLlalVg~-~~prkL~I~d~~~~~ 74 (79)
...|.+|+..++...+. | .+||..+.-. ..++. ....+...-...--.-..+|+++. .....+.+||...+.
T Consensus 291 ~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~l-t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 291 EPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred ceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEe-ecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 35789999988777665 3 4788543211 11111 111122222222223457777764 233467788876554
No 145
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=37.28 E-value=1.4e+02 Score=20.59 Aligned_cols=19 Identities=37% Similarity=0.579 Sum_probs=16.8
Q ss_pred CCEEEEEcCCceEEEecCC
Q psy6185 9 LLSLSVGTKSGYRLFSLNS 27 (79)
Q Consensus 9 ~sc~~vgt~~GfrIyn~~~ 27 (79)
...+++|++++|-+++++.
T Consensus 148 ~~~i~v~~~~~f~~idl~~ 166 (275)
T PF00780_consen 148 GNKICVGTSKGFYLIDLNT 166 (275)
T ss_pred CCEEEEEeCCceEEEecCC
Confidence 6789999999999999764
No 146
>KOG0283|consensus
Probab=37.11 E-value=1.1e+02 Score=26.08 Aligned_cols=71 Identities=13% Similarity=0.176 Sum_probs=41.5
Q ss_pred eeccCCCCEEEEEcCCceE-EEecCCcchhheeeec---------cCCC-eEEEEEecccceEEEeccCCCcEEEEEeCC
Q psy6185 3 SVPLKGLLSLSVGTKSGYR-LFSLNSIDTLEQIYEN---------SQED-VCIVERLFSSSLVAVVSLSSPRKLTKEEGK 71 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~Gfr-Iyn~~~~d~~~~~~~~---------~~g~-v~ivEmLf~snLlalVg~~~prkL~I~d~~ 71 (79)
+.|-+|+--..|||-+|+- +|+... ++...+. ..+. |.=.|-+...+=-.||. .+-.+++|+|..
T Consensus 457 vcy~PdGk~avIGt~~G~C~fY~t~~---lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVT-SnDSrIRI~d~~ 532 (712)
T KOG0283|consen 457 VCYSPDGKGAVIGTFNGYCRFYDTEG---LKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVT-SNDSRIRIYDGR 532 (712)
T ss_pred EEeccCCceEEEEEeccEEEEEEccC---CeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEe-cCCCceEEEecc
Confidence 6789999999999999985 555332 2221111 1233 43344443333235565 344688999986
Q ss_pred CCeEEe
Q psy6185 72 NEEEEK 77 (79)
Q Consensus 72 ~~~~I~ 77 (79)
....|+
T Consensus 533 ~~~lv~ 538 (712)
T KOG0283|consen 533 DKDLVH 538 (712)
T ss_pred chhhhh
Confidence 655544
No 147
>PF08576 DUF1764: Eukaryotic protein of unknown function (DUF1764); InterPro: IPR013885 This entry consists of eukaryotic proteins of unknown function, including many hypothetical proteins.
Probab=36.92 E-value=17 Score=22.83 Aligned_cols=9 Identities=22% Similarity=0.715 Sum_probs=7.8
Q ss_pred cCCceEEEe
Q psy6185 16 TKSGYRLFS 24 (79)
Q Consensus 16 t~~GfrIyn 24 (79)
|.+||+||.
T Consensus 69 teDGl~IYt 77 (102)
T PF08576_consen 69 TEDGLPIYT 77 (102)
T ss_pred cCCCceEec
Confidence 678999996
No 148
>KOG2055|consensus
Probab=36.44 E-value=86 Score=25.56 Aligned_cols=58 Identities=10% Similarity=0.068 Sum_probs=36.6
Q ss_pred eeeccCCCC-EEEEEc-CCceEEEecCC--cchhheeeeccCCCeEEEEEecccceEEEecc
Q psy6185 2 CSVPLKGLL-SLSVGT-KSGYRLFSLNS--IDTLEQIYENSQEDVCIVERLFSSSLVAVVSL 59 (79)
Q Consensus 2 ~~~fNQD~s-c~~vgt-~~GfrIyn~~~--~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~ 59 (79)
+..|-++++ -++++. +.=+.+|++.. ++++...+..+..++-.-|.=+.+|+||++|.
T Consensus 262 ~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~ 323 (514)
T KOG2055|consen 262 KAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGN 323 (514)
T ss_pred eeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEccc
Confidence 455667776 444444 44566777654 34555544445556666666699999999995
No 149
>KOG1523|consensus
Probab=35.85 E-value=1.3e+02 Score=23.55 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=40.5
Q ss_pred CeeeccCCCCEEEEEcCC-ceEEEecCCcchhhe--eeeccCCCeEEEEEecccceEEEec
Q psy6185 1 MCSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQ--IYENSQEDVCIVERLFSSSLVAVVS 58 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~--~~~~~~g~v~ivEmLf~snLlalVg 58 (79)
.|-.||+|.+-+|++..+ -.-||....-++-+. .++.++..+..|.-==.+|=|.-.+
T Consensus 14 tchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs 74 (361)
T KOG1523|consen 14 TCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCS 74 (361)
T ss_pred eeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEcc
Confidence 377899999999999998 899997544442222 3445667777776666666665544
No 150
>KOG4328|consensus
Probab=34.50 E-value=1.6e+02 Score=23.96 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=44.8
Q ss_pred eeccCCCCE-EEEEcCCceEEEecC----CcchhheeeeccCC--CeEEE--EEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 3 SVPLKGLLS-LSVGTKSGYRLFSLN----SIDTLEQIYENSQE--DVCIV--ERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 3 ~~fNQD~sc-~~vgt~~GfrIyn~~----~~d~~~~~~~~~~g--~v~iv--EmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
+.|.+++.- ++.+.++=.|||+.+ ..+|+..+.+...- =+... +-=-+-||+++ | .-||++-|+|.+.+
T Consensus 375 AyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~v-g-~~~r~IDv~~~~~~ 452 (498)
T KOG4328|consen 375 AYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVV-G-RYPRPIDVFDGNGG 452 (498)
T ss_pred eEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEE-e-ccCcceeEEcCCCC
Confidence 457776544 455667799999863 34566665543211 11111 11115566643 4 55688999999999
Q ss_pred eEEee
Q psy6185 74 EEEKK 78 (79)
Q Consensus 74 ~~I~~ 78 (79)
+.+||
T Consensus 453 q~v~e 457 (498)
T KOG4328|consen 453 QMVCE 457 (498)
T ss_pred EEeee
Confidence 98887
No 151
>KOG0307|consensus
Probab=34.17 E-value=43 Score=29.57 Aligned_cols=75 Identities=13% Similarity=0.021 Sum_probs=42.9
Q ss_pred eeeccCCCC-EEEEEcCCc-eEEEecCCcc-hhheeeeccCCCeEEEE-EecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLL-SLSVGTKSG-YRLFSLNSID-TLEQIYENSQEDVCIVE-RLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~s-c~~vgt~~G-frIyn~~~~d-~~~~~~~~~~g~v~ivE-mLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.+.||.++. -+|.|-++| .-||+++..+ |+..-.....+.|..+- -.--+.++| ++.+..+..|||-++++.|.
T Consensus 121 gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILA--S~s~sg~~~iWDlr~~~pii 198 (1049)
T KOG0307|consen 121 GLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILA--SGSPSGRAVIWDLRKKKPII 198 (1049)
T ss_pred eeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhh--ccCCCCCceeccccCCCccc
Confidence 478999999 788888885 7788887653 43321111112222110 000111111 22555699999999998876
Q ss_pred e
Q psy6185 78 K 78 (79)
Q Consensus 78 ~ 78 (79)
+
T Consensus 199 ~ 199 (1049)
T KOG0307|consen 199 K 199 (1049)
T ss_pred c
Confidence 4
No 152
>KOG0310|consensus
Probab=34.17 E-value=2.6e+02 Score=22.81 Aligned_cols=58 Identities=10% Similarity=0.022 Sum_probs=34.6
Q ss_pred CCCCEEEEEcCCceEEE-ecCCcchhheeeeccCCCeEEEEEecccce------------EEEeccCCCcEEEEEeCCCC
Q psy6185 7 KGLLSLSVGTKSGYRLF-SLNSIDTLEQIYENSQEDVCIVERLFSSSL------------VAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 7 QD~sc~~vgt~~GfrIy-n~~~~d~~~~~~~~~~g~v~ivEmLf~snL------------lalVg~~~prkL~I~d~~~~ 73 (79)
||.+-|+.|.+++.+-| .++.- .. +.|..-.+-+ +.+-|+++ .++++||++..
T Consensus 121 ~d~t~l~s~sDd~v~k~~d~s~a---~v----------~~~l~~htDYVR~g~~~~~~~hivvtGsYD-g~vrl~DtR~~ 186 (487)
T KOG0310|consen 121 QDNTMLVSGSDDKVVKYWDLSTA---YV----------QAELSGHTDYVRCGDISPANDHIVVTGSYD-GKVRLWDTRSL 186 (487)
T ss_pred cCCeEEEecCCCceEEEEEcCCc---EE----------EEEecCCcceeEeeccccCCCeEEEecCCC-ceEEEEEeccC
Confidence 78999999999977655 32221 11 2222222222 23345465 79999999987
Q ss_pred -eEEee
Q psy6185 74 -EEEKK 78 (79)
Q Consensus 74 -~~I~~ 78 (79)
..+.|
T Consensus 187 ~~~v~e 192 (487)
T KOG0310|consen 187 TSRVVE 192 (487)
T ss_pred CceeEE
Confidence 66655
No 153
>KOG0292|consensus
Probab=34.09 E-value=2.4e+02 Score=25.29 Aligned_cols=72 Identities=7% Similarity=-0.020 Sum_probs=44.3
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEe-cccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERL-FSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmL-f~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.+.|-+++.-|..|-++ -.+|||-+. +++.-.-.|-.-.|.-+ |---+==|+++.+...++|||=++++.||
T Consensus 56 gv~FH~~qplFVSGGDDykIkVWnYk~----rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia 129 (1202)
T KOG0292|consen 56 GVDFHPTQPLFVSGGDDYKIKVWNYKT----RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA 129 (1202)
T ss_pred eeeecCCCCeEEecCCccEEEEEeccc----ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE
Confidence 57899999999888777 888898432 22211111222122111 11122224677888899999999999887
No 154
>KOG0308|consensus
Probab=33.43 E-value=44 Score=28.29 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=21.8
Q ss_pred EEEeccCCCcEEEEEeCCCCeEEeeC
Q psy6185 54 VAVVSLSSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 54 lalVg~~~prkL~I~d~~~~~~I~~~ 79 (79)
..+|+|--.+.|++||.+++++|-++
T Consensus 184 t~ivsGgtek~lr~wDprt~~kimkL 209 (735)
T KOG0308|consen 184 TIIVSGGTEKDLRLWDPRTCKKIMKL 209 (735)
T ss_pred eEEEecCcccceEEeccccccceeee
Confidence 56788888899999999999888653
No 155
>KOG0273|consensus
Probab=33.23 E-value=2.7e+02 Score=22.83 Aligned_cols=62 Identities=11% Similarity=-0.010 Sum_probs=42.9
Q ss_pred CCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 9 LLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 9 ~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
..-.+++++.-++||.+..-.| ...+....|.|..+|-=-+-+|||-- .+.-.|+||+-++.
T Consensus 330 ~~F~ts~td~~i~V~kv~~~~P-~~t~~GH~g~V~alk~n~tg~LLaS~--SdD~TlkiWs~~~~ 391 (524)
T KOG0273|consen 330 DEFATSSTDGCIHVCKVGEDRP-VKTFIGHHGEVNALKWNPTGSLLASC--SDDGTLKIWSMGQS 391 (524)
T ss_pred ceEeecCCCceEEEEEecCCCc-ceeeecccCceEEEEECCCCceEEEe--cCCCeeEeeecCCC
Confidence 3444555666799998654345 33455578999888877777787654 66689999996654
No 156
>PF01376 Enterotoxin_b: Heat-labile enterotoxin beta chain; InterPro: IPR001835 Escherichia coli heat-labile enterotoxin is a bacterial protein toxin with an AB5 multimer structure, in which the B pentamer has a membrane-binding function and the A chain (IPR001144 from INTERPRO) is needed for enzymatic activity []. The B subunits are arranged as a donut-shaped pentamer, each subunit participating in ~30 hydrogen bonds and 6 salt bridges with its two neighbours []. The A subunit has a less well-defined secondary structure. It predominantly interacts with the pentamer via the C-terminal A2 fragment, which runs through the charged central pore of the B subunits. A putative catalytic residue in the A1 fragment (Glu112) lies close to a hydrophobic region, which packs two loops together. It is thought that this region might be important for catalysis and membrane translocation [].; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1LTA_D 2XRS_O 1LTS_E 1LTT_H 1TET_P 1JQY_Y 1PZI_D 1DJR_E 1EEF_D 1LTB_E ....
Probab=32.90 E-value=41 Score=21.40 Aligned_cols=17 Identities=24% Similarity=0.132 Sum_probs=13.9
Q ss_pred cEEEEEeCCCCeEEeeC
Q psy6185 63 RKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 63 rkL~I~d~~~~~~I~~~ 79 (79)
.||.+||-|+-..|..|
T Consensus 83 ~klcvwnnktp~siaai 99 (102)
T PF01376_consen 83 SKLCVWNNKTPNSIAAI 99 (102)
T ss_dssp EEEEEETTSSSEEEEEE
T ss_pred hheeeecCCCcchhhee
Confidence 48999999998887654
No 157
>KOG1408|consensus
Probab=32.81 E-value=1.9e+02 Score=25.32 Aligned_cols=63 Identities=17% Similarity=0.131 Sum_probs=42.6
Q ss_pred EEEEcCCceEEEecCCcchhheeeec---cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 12 LSVGTKSGYRLFSLNSIDTLEQIYEN---SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 12 ~~vgt~~GfrIyn~~~~d~~~~~~~~---~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+.++-+.-.|||+++. .+..+.|.. +.|+.--|..==+.++||-- .+.+.|.++|+..+..+.
T Consensus 612 ~t~cQDrnirif~i~s-gKq~k~FKgs~~~eG~lIKv~lDPSgiY~atS--csdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 612 VTVCQDRNIRIFDIES-GKQVKSFKGSRDHEGDLIKVILDPSGIYLATS--CSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred EEEecccceEEEeccc-cceeeeecccccCCCceEEEEECCCccEEEEe--ecCCceEEEEeccchhhh
Confidence 5667778999999765 333445543 44666555555556666543 778999999999887654
No 158
>KOG1524|consensus
Probab=32.70 E-value=2.9e+02 Score=23.41 Aligned_cols=25 Identities=12% Similarity=0.028 Sum_probs=19.4
Q ss_pred CeeeccCCCCEEEEEcCCce-EEEec
Q psy6185 1 MCSVPLKGLLSLSVGTKSGY-RLFSL 25 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~Gf-rIyn~ 25 (79)
+|-+||.|++-+..+-++|+ +|++-
T Consensus 108 ~~gRW~~dGtgLlt~GEDG~iKiWSr 133 (737)
T KOG1524|consen 108 SSGRWSPDGAGLLTAGEDGVIKIWSR 133 (737)
T ss_pred hhcccCCCCceeeeecCCceEEEEec
Confidence 36789999998877777765 88863
No 159
>KOG2727|consensus
Probab=32.60 E-value=34 Score=30.29 Aligned_cols=19 Identities=42% Similarity=0.604 Sum_probs=15.7
Q ss_pred CCCCEEEEEcCCceEEEec
Q psy6185 7 KGLLSLSVGTKSGYRLFSL 25 (79)
Q Consensus 7 QD~sc~~vgt~~GfrIyn~ 25 (79)
-|-+|++|||.+||-.|=.
T Consensus 98 ~dwtcVavGt~sGyV~FYT 116 (1244)
T KOG2727|consen 98 VDWTCVAVGTSSGYVLFYT 116 (1244)
T ss_pred cceeEEEEecccceEEEEe
Confidence 4678999999999977643
No 160
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=31.24 E-value=2.6e+02 Score=21.98 Aligned_cols=61 Identities=26% Similarity=0.357 Sum_probs=35.8
Q ss_pred CCCCEEEEEcCCce-EEEecCC--cchhheeeecc-CCCeEEEEEe-c----ccceEEEeccCCCcEEEEEeC
Q psy6185 7 KGLLSLSVGTKSGY-RLFSLNS--IDTLEQIYENS-QEDVCIVERL-F----SSSLVAVVSLSSPRKLTKEEG 70 (79)
Q Consensus 7 QD~sc~~vgt~~Gf-rIyn~~~--~d~~~~~~~~~-~g~v~ivEmL-f----~snLlalVg~~~prkL~I~d~ 70 (79)
++...+.||.-.|+ |||.-+. .++-...++.+ ..+|--+|.= | .-+.||+ .-||||.||..
T Consensus 35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV---LhP~kl~vY~v 104 (418)
T PF14727_consen 35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV---LHPRKLSVYSV 104 (418)
T ss_pred CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE---ecCCEEEEEEE
Confidence 45568899998875 8996322 12222344432 2344444432 2 2346666 57999999986
No 161
>KOG4640|consensus
Probab=30.87 E-value=41 Score=28.21 Aligned_cols=23 Identities=30% Similarity=0.195 Sum_probs=19.5
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEe
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFS 24 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn 24 (79)
|++|+.|+.-+|||.++| .++-+
T Consensus 67 sL~W~~DGkllaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 67 SLCWRPDGKLLAVGFKDGTIRLHD 90 (665)
T ss_pred eeeecCCCCEEEEEecCCeEEEEE
Confidence 789999999999999997 45554
No 162
>KOG0641|consensus
Probab=30.38 E-value=2.4e+02 Score=21.45 Aligned_cols=36 Identities=11% Similarity=-0.058 Sum_probs=26.9
Q ss_pred CCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 40 EDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 40 g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
|-.+.+=-||+=|=-.++++.....++.||-+-+..
T Consensus 181 ghtghilalyswn~~m~~sgsqdktirfwdlrv~~~ 216 (350)
T KOG0641|consen 181 GHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSC 216 (350)
T ss_pred CCcccEEEEEEecCcEEEccCCCceEEEEeeeccce
Confidence 455667778887777788887778999999765543
No 163
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=29.68 E-value=49 Score=20.44 Aligned_cols=17 Identities=12% Similarity=0.071 Sum_probs=13.4
Q ss_pred cEEEEEeCCCCeEEeeC
Q psy6185 63 RKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 63 rkL~I~d~~~~~~I~~~ 79 (79)
-.++|.|..++..|.+|
T Consensus 68 ~vVkViD~~T~eVIRqI 84 (107)
T PF03646_consen 68 VVVKVIDKETGEVIRQI 84 (107)
T ss_dssp EEEEEEETTT-SEEEEE
T ss_pred EEEEEEECCCCcEEEeC
Confidence 35689999999999886
No 164
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=28.37 E-value=98 Score=25.82 Aligned_cols=25 Identities=32% Similarity=0.209 Sum_probs=19.6
Q ss_pred ccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 50 SSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 50 ~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
+++-+|+|. .+...|.|||.+.+..
T Consensus 39 s~~k~a~V~-~~~~~LtIWD~~~~~l 63 (631)
T PF12234_consen 39 SIKKIAVVD-SSRSELTIWDTRSGVL 63 (631)
T ss_pred ccCcEEEEE-CCCCEEEEEEcCCcEE
Confidence 367789996 5567999999988763
No 165
>PRK07738 flagellar protein FlaG; Provisional
Probab=28.21 E-value=60 Score=21.31 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=16.1
Q ss_pred CCCcEEEEEeCCCCeEEeeC
Q psy6185 60 SSPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 60 ~~prkL~I~d~~~~~~I~~~ 79 (79)
...-.++|.|.+++..|.||
T Consensus 74 t~~~vVkVvD~~T~EVIRQI 93 (117)
T PRK07738 74 LNEYYVQVVDERTNEVIREI 93 (117)
T ss_pred CCcEEEEEEECCCCeeeeeC
Confidence 33346799999999999987
No 166
>PRK08868 flagellar protein FlaG; Provisional
Probab=27.60 E-value=59 Score=22.19 Aligned_cols=19 Identities=16% Similarity=0.115 Sum_probs=15.8
Q ss_pred CCcEEEEEeCCCCeEEeeC
Q psy6185 61 SPRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 61 ~prkL~I~d~~~~~~I~~~ 79 (79)
..-.++|.|.+++..|.+|
T Consensus 100 gr~VVkViD~~T~EVIRQI 118 (144)
T PRK08868 100 GRDVVTIYEASTGDIIRQI 118 (144)
T ss_pred CCEEEEEEECCCCceeeeC
Confidence 3346899999999999987
No 167
>PRK08452 flagellar protein FlaG; Provisional
Probab=27.35 E-value=61 Score=21.46 Aligned_cols=18 Identities=11% Similarity=0.119 Sum_probs=15.3
Q ss_pred CcEEEEEeCCCCeEEeeC
Q psy6185 62 PRKLTKEEGKNEEEEKKI 79 (79)
Q Consensus 62 prkL~I~d~~~~~~I~~~ 79 (79)
.=.++|.|.+++..|.+|
T Consensus 83 ~~vVkVvD~~T~eVIRqI 100 (124)
T PRK08452 83 GLVVSVKEANGGKVIREI 100 (124)
T ss_pred cEEEEEEECCCCceeeeC
Confidence 346789999999999987
No 168
>KOG2096|consensus
Probab=27.21 E-value=3.1e+02 Score=21.75 Aligned_cols=27 Identities=11% Similarity=0.020 Sum_probs=21.9
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCc
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSI 28 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~ 28 (79)
|+.|..|+.-|+....+ -.|||+++.+
T Consensus 91 ~~~FsSdGK~lat~~~Dr~Ir~w~~~DF 118 (420)
T KOG2096|consen 91 DVAFSSDGKKLATISGDRSIRLWDVRDF 118 (420)
T ss_pred eeEEcCCCceeEEEeCCceEEEEecchh
Confidence 78999999999887776 6899986543
No 169
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=26.46 E-value=1.5e+02 Score=22.84 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=27.8
Q ss_pred CCEEEEEcCCceEEEecCCcchhheeeec--cCCCeEEEEEecccceEEEeccCCCcEEEEEe
Q psy6185 9 LLSLSVGTKSGYRLFSLNSIDTLEQIYEN--SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEE 69 (79)
Q Consensus 9 ~sc~~vgt~~GfrIyn~~~~d~~~~~~~~--~~g~v~ivEmLf~snLlalVg~~~prkL~I~d 69 (79)
...+.+.++++.|||+.-......+.++. ...++.++++.-+.+=.+||.-+...+++++-
T Consensus 226 ~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~S 288 (395)
T PF08596_consen 226 PGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYS 288 (395)
T ss_dssp -EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEE
T ss_pred CcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEE
Confidence 45788899999999974222111112211 13456677644333333344333444555543
No 170
>KOG0299|consensus
Probab=26.28 E-value=2.7e+02 Score=22.66 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=41.3
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhheeeeccCCCeEEEEEeccc-ceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~s-nLlalVg~~~prkL~I~d~~~~ 73 (79)
|+.-..|+.-|+.|-.+ =+-||+++..++.. .+....+.|.-.-+-.-| .|. ++...|.+++|+-...
T Consensus 207 ~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~-~~~ghr~~V~~L~fr~gt~~ly---s~s~Drsvkvw~~~~~ 276 (479)
T KOG0299|consen 207 TLAVSSDGKYLATGGRDRHVQIWDCDTLEHVK-VFKGHRGAVSSLAFRKGTSELY---SASADRSVKVWSIDQL 276 (479)
T ss_pred EEEEcCCCcEEEecCCCceEEEecCcccchhh-cccccccceeeeeeecCcccee---eeecCCceEEEehhHh
Confidence 56677888888887766 55688766555422 233344566443333333 343 2245599999996543
No 171
>KOG0295|consensus
Probab=25.39 E-value=3.5e+02 Score=21.54 Aligned_cols=66 Identities=14% Similarity=0.051 Sum_probs=35.3
Q ss_pred CCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 9 LLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 9 ~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
+.|++-.-+.-.|++++.. ....+.-..-+-.+-+.+|++-===|++-.+.+.|+|||-+.++...
T Consensus 305 ~~l~s~SrDktIk~wdv~t---g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk 370 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVST---GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMK 370 (406)
T ss_pred cEEEeecccceEEEEeccC---CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeee
Confidence 4555555555788888643 22333221222334455555321111222667899999999877543
No 172
>KOG1963|consensus
Probab=24.79 E-value=3.5e+02 Score=23.42 Aligned_cols=73 Identities=16% Similarity=-0.015 Sum_probs=48.4
Q ss_pred eccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEecccc-eEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 4 VPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 4 ~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~sn-LlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
.|.+|+--+.+-+.+=..||+... ..+...++....++--++.+-+.- ..++.+...-+.+++||......+.
T Consensus 23 vfSnD~k~l~~~~~~~V~VyS~~T-g~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llk 96 (792)
T KOG1963|consen 23 VFSNDAKFLFLCTGNFVKVYSTAT-GECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLK 96 (792)
T ss_pred ccccCCcEEEEeeCCEEEEEecch-HhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEE
Confidence 589999999999999999997543 222233444444554455554444 2444444666899999988777654
No 173
>PF13584 BatD: Oxygen tolerance
Probab=23.90 E-value=1.5e+02 Score=22.83 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=34.8
Q ss_pred cCCceEEEecCCcchhheeeeccCCCeEEEEEecccceEEEecc---CCCcEEEEEeCCCCeE
Q psy6185 16 TKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL---SSPRKLTKEEGKNEEE 75 (79)
Q Consensus 16 t~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~---~~prkL~I~d~~~~~~ 75 (79)
..+||++|.-. + ......+.++ ...++-|+--+++--+| .++=++.-||.++++.
T Consensus 312 ~~~~~~vy~~~---~-~~~~~~~~~g-~~g~~~~~~~~ip~~~G~~~lP~i~~~~fdp~~~~y 369 (484)
T PF13584_consen 312 LPKGFRVYPPK---P-QEQDKPSGGG-LTGSRTFKYTLIPKKPGDFTLPAIRFSWFDPQTGKY 369 (484)
T ss_pred CCcccEEcCCC---c-cccccccCCc-ceEEEEEEEEEEeCCCCeEEcCCeEEEEEcCCCCeE
Confidence 34899999522 2 1111222233 45667777777776666 7888999999988764
No 174
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=23.85 E-value=1.8e+02 Score=17.80 Aligned_cols=39 Identities=10% Similarity=0.105 Sum_probs=27.7
Q ss_pred CCeEEEEEecccceEEEecc------CCCcEEEEEeCCCCeEEee
Q psy6185 40 EDVCIVERLFSSSLVAVVSL------SSPRKLTKEEGKNEEEEKK 78 (79)
Q Consensus 40 g~v~ivEmLf~snLlalVg~------~~prkL~I~d~~~~~~I~~ 78 (79)
.++++.-..+.-++++.|.. -+-=+|.|+|.+++++|.+
T Consensus 2 TDlGl~ak~~~~~~~v~v~~L~tg~Pv~ga~V~l~~~~~~~~l~~ 46 (97)
T PF11974_consen 2 TDLGLTAKQGPDGLLVWVTSLSTGKPVAGAEVELYDSRNGQVLAS 46 (97)
T ss_pred cceEEEEEEcCCCEEEEEeeCCCCCccCCCEEEEEECCCCcEeee
Confidence 36778888888888888875 2223889999666666653
No 175
>KOG0275|consensus
Probab=23.48 E-value=58 Score=25.82 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=42.2
Q ss_pred eeeccCCCCEEEEEcCCce-EEEecCCcchhhe--eeecc------CCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSGY-RLFSLNSIDTLEQ--IYENS------QEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~Gf-rIyn~~~~d~~~~--~~~~~------~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
|..|.+|+-.++.|..+|| .|||-- ..++++ .|+.+ +..|- -|=|+-.-=.+.+|.-..|++||-..+
T Consensus 218 cA~FSPDgqyLvsgSvDGFiEVWny~-~GKlrKDLkYQAqd~fMMmd~aVl--ci~FSRDsEMlAsGsqDGkIKvWri~t 294 (508)
T KOG0275|consen 218 CARFSPDGQYLVSGSVDGFIEVWNYT-TGKLRKDLKYQAQDNFMMMDDAVL--CISFSRDSEMLASGSQDGKIKVWRIET 294 (508)
T ss_pred heeeCCCCceEeeccccceeeeehhc-cchhhhhhhhhhhcceeecccceE--EEeecccHHHhhccCcCCcEEEEEEec
Confidence 7899999999999999998 477632 234433 33322 12221 122221111112335557999998887
Q ss_pred CeEEe
Q psy6185 73 EEEEK 77 (79)
Q Consensus 73 ~~~I~ 77 (79)
+..+.
T Consensus 295 G~ClR 299 (508)
T KOG0275|consen 295 GQCLR 299 (508)
T ss_pred chHHH
Confidence 76543
No 176
>KOG0772|consensus
Probab=23.40 E-value=1.6e+02 Score=24.54 Aligned_cols=67 Identities=7% Similarity=0.049 Sum_probs=41.6
Q ss_pred eeccCCCCEEEEEcCCc-eEEEecCC--cchhheeee-ccCC--CeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 3 SVPLKGLLSLSVGTKSG-YRLFSLNS--IDTLEQIYE-NSQE--DVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 3 ~~fNQD~sc~~vgt~~G-frIyn~~~--~d~~~~~~~-~~~g--~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
-.||.|+.-||.|-.+| ..+|.... +.| ..++. -..+ ++.-+--=+-.|+|+- +.--+.|++||-.+
T Consensus 323 C~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p-~~~vk~AH~~g~~Itsi~FS~dg~~LlS--Rg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 323 CAWNRDGKLIAAGCLDGSIQIWDKGSRTVRP-VMKVKDAHLPGQDITSISFSYDGNYLLS--RGFDDTLKVWDLRQ 395 (641)
T ss_pred eecCCCcchhhhcccCCceeeeecCCccccc-ceEeeeccCCCCceeEEEeccccchhhh--ccCCCceeeeeccc
Confidence 36999999999999885 77886322 223 11222 2344 5555555555566643 33347899999765
No 177
>KOG0285|consensus
Probab=23.32 E-value=1.4e+02 Score=23.89 Aligned_cols=69 Identities=13% Similarity=0.037 Sum_probs=39.9
Q ss_pred CeeeccCCCCEEEEEcCCceEEEecCCcchhheeeeccCCCeEEEEEec-ccceEEEeccCCCcEEEEEeCCCCe
Q psy6185 1 MCSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLF-SSSLVAVVSLSSPRKLTKEEGKNEE 74 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~~~~g~v~ivEmLf-~snLlalVg~~~prkL~I~d~~~~~ 74 (79)
+|+..|++..-||.|..+-++-+.+ | -........|--+|+--|- .+-=+ +|.|.+...+..||.+.+-
T Consensus 323 ral~lhP~e~~fASas~dnik~w~~-p---~g~f~~nlsgh~~iintl~~nsD~v-~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 323 RALCLHPKENLFASASPDNIKQWKL-P---EGEFLQNLSGHNAIINTLSVNSDGV-LVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred eEEecCCchhhhhccCCccceeccC-C---ccchhhccccccceeeeeeeccCce-EEEcCCceEEEEEecCcCc
Confidence 4677888888999999998888864 2 1222222222222222221 12222 2344566789999988764
No 178
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=23.31 E-value=71 Score=23.68 Aligned_cols=18 Identities=33% Similarity=0.553 Sum_probs=13.4
Q ss_pred CCEEEEEcCCceEEEecCC
Q psy6185 9 LLSLSVGTKSGYRLFSLNS 27 (79)
Q Consensus 9 ~sc~~vgt~~GfrIyn~~~ 27 (79)
-||+.+||++|.- |=++|
T Consensus 195 ~scLViGTE~~~i-~iLd~ 212 (257)
T PF14779_consen 195 VSCLVIGTESGEI-YILDP 212 (257)
T ss_pred cceEEEEecCCeE-EEECc
Confidence 4799999999965 43333
No 179
>KOG0302|consensus
Probab=23.23 E-value=4e+02 Score=21.42 Aligned_cols=64 Identities=13% Similarity=0.095 Sum_probs=41.3
Q ss_pred cCCCCEEEEEcCCceEEEecCCcchhh--eeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCC
Q psy6185 6 LKGLLSLSVGTKSGYRLFSLNSIDTLE--QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKN 72 (79)
Q Consensus 6 NQD~sc~~vgt~~GfrIyn~~~~d~~~--~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~ 72 (79)
+-++--++|+-+.-+||+.+.. .|-+ .......++|.++--=-+-+|| ++|-+-..+.|||-++
T Consensus 268 tE~~vfaScS~DgsIrIWDiRs-~~~~~~~~~kAh~sDVNVISWnr~~~lL--asG~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 268 TEDGVFASCSCDGSIRIWDIRS-GPKKAAVSTKAHNSDVNVISWNRREPLL--ASGGDDGTLSIWDLRQ 333 (440)
T ss_pred ccCceEEeeecCceEEEEEecC-CCccceeEeeccCCceeeEEccCCccee--eecCCCceEEEEEhhh
Confidence 3445556777777899998754 2222 2233456788777665555655 4556778999999664
No 180
>KOG2139|consensus
Probab=22.74 E-value=87 Score=25.00 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=24.3
Q ss_pred eeeccCCCCEEEEEcCC-ceEEEecCCcchhh
Q psy6185 2 CSVPLKGLLSLSVGTKS-GYRLFSLNSIDTLE 32 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~-GfrIyn~~~~d~~~ 32 (79)
.++|||---||++|+.+ -.|||+-+...|..
T Consensus 103 ~~aWhqH~~~fava~nddvVriy~ksst~pt~ 134 (445)
T KOG2139|consen 103 GVAWHQHIIAFAVATNDDVVRIYDKSSTCPTK 134 (445)
T ss_pred eEeechhhhhhhhhccCcEEEEeccCCCCCce
Confidence 57899999999999887 89999855444433
No 181
>KOG3881|consensus
Probab=22.63 E-value=4e+02 Score=21.27 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=46.6
Q ss_pred eeeccCC--CCEEEEEcCCc-eEEEecCCc-chhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEE
Q psy6185 2 CSVPLKG--LLSLSVGTKSG-YRLFSLNSI-DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEE 76 (79)
Q Consensus 2 ~~~fNQD--~sc~~vgt~~G-frIyn~~~~-d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I 76 (79)
.+.|=.+ +.=|+.+|..| .|+|+..+- -|+. .+.....+++.+-...+.|+| ++| ..-..|..+|..+++.+
T Consensus 207 di~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~-~fd~~E~~is~~~l~p~gn~I-y~g-n~~g~l~~FD~r~~kl~ 282 (412)
T KOG3881|consen 207 DIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVA-QFDFLENPISSTGLTPSGNFI-YTG-NTKGQLAKFDLRGGKLL 282 (412)
T ss_pred cceecCCCCCceEEEEecceeEEEecCcccCccee-EeccccCcceeeeecCCCcEE-EEe-cccchhheecccCceee
Confidence 3566666 77789999886 589975432 2322 344456788888888899985 566 33345566666665544
No 182
>KOG0296|consensus
Probab=22.37 E-value=1.1e+02 Score=24.13 Aligned_cols=69 Identities=17% Similarity=0.052 Sum_probs=35.2
Q ss_pred eeeccCCCCEEEEEcCCceEEE---------ecCC-cchhheeeeccCCCeEEEEEecccceEEEec-cCCCcEEEEEeC
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLF---------SLNS-IDTLEQIYENSQEDVCIVERLFSSSLVAVVS-LSSPRKLTKEEG 70 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIy---------n~~~-~d~~~~~~~~~~g~v~ivEmLf~snLlalVg-~~~prkL~I~d~ 70 (79)
|+++|++.+-+.-|...|-.-+ +|++ ..| ....++...+--||-+-+|+-+-|.. ++--.++.|||.
T Consensus 238 ~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~--~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~ 315 (399)
T KOG0296|consen 238 CISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVP--ELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDL 315 (399)
T ss_pred ccccccccceeEeccCCccEEEEccccceEEEecCCCCc--cccccchhhhhhhhhcccccccchhhcccccceEEEEec
Confidence 7888998887666666553322 2211 111 11112334555566665555443322 133367777876
Q ss_pred CC
Q psy6185 71 KN 72 (79)
Q Consensus 71 ~~ 72 (79)
.+
T Consensus 316 a~ 317 (399)
T KOG0296|consen 316 AA 317 (399)
T ss_pred cc
Confidence 54
No 183
>KOG0307|consensus
Probab=22.19 E-value=2.5e+02 Score=25.09 Aligned_cols=76 Identities=11% Similarity=-0.007 Sum_probs=43.3
Q ss_pred eeeccCCCC-EEEEEcCC-ceEEE---ecCC-cchhheeeeccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeE
Q psy6185 2 CSVPLKGLL-SLSVGTKS-GYRLF---SLNS-IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEE 75 (79)
Q Consensus 2 ~~~fNQD~s-c~~vgt~~-GfrIy---n~~~-~d~~~~~~~~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~ 75 (79)
.+.|++|++ -+++++++ +--+. ++.. .-|++. ++...-|+--++-=...+-+++-++. .+++++||.+++..
T Consensus 211 ~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~-~~~H~~GilslsWc~~D~~lllSsgk-D~~ii~wN~~tgEv 288 (1049)
T KOG0307|consen 211 VLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKI-LEGHQRGILSLSWCPQDPRLLLSSGK-DNRIICWNPNTGEV 288 (1049)
T ss_pred eeeeCCCCceeeeeecCCCCCceeEeecccccCCchhh-hcccccceeeeccCCCCchhhhcccC-CCCeeEecCCCceE
Confidence 367888865 57777766 44444 3221 124332 33334455444444444444444443 47889999999988
Q ss_pred EeeC
Q psy6185 76 EKKI 79 (79)
Q Consensus 76 I~~~ 79 (79)
+.|+
T Consensus 289 l~~~ 292 (1049)
T KOG0307|consen 289 LGEL 292 (1049)
T ss_pred eeec
Confidence 8764
No 184
>KOG1832|consensus
Probab=21.89 E-value=1.1e+02 Score=27.63 Aligned_cols=26 Identities=31% Similarity=0.608 Sum_probs=22.3
Q ss_pred eeeccCCCCEEEEEcCCc-eEEEecCC
Q psy6185 2 CSVPLKGLLSLSVGTKSG-YRLFSLNS 27 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~G-frIyn~~~ 27 (79)
|+.|.-+---++||+-+| .++||...
T Consensus 1106 c~afs~~~~hL~vG~~~Geik~~nv~s 1132 (1516)
T KOG1832|consen 1106 CIAFSGGTNHLAVGSHAGEIKIFNVSS 1132 (1516)
T ss_pred eEEeecCCceEEeeeccceEEEEEccC
Confidence 788999999999999996 78998654
No 185
>KOG2139|consensus
Probab=21.74 E-value=4.3e+02 Score=21.23 Aligned_cols=75 Identities=9% Similarity=0.054 Sum_probs=39.9
Q ss_pred eeeccCC-CCEEEEEcCCceEEEecCCcchhheeee----------ccCCCeEEEEEecccceEEEecc-CCCcEEEEEe
Q psy6185 2 CSVPLKG-LLSLSVGTKSGYRLFSLNSIDTLEQIYE----------NSQEDVCIVERLFSSSLVAVVSL-SSPRKLTKEE 69 (79)
Q Consensus 2 ~~~fNQD-~sc~~vgt~~GfrIyn~~~~d~~~~~~~----------~~~g~v~ivEmLf~snLlalVg~-~~prkL~I~d 69 (79)
|+.|-+- +|-|+||...|.-|+..++.--..+-.+ ++.|..-+--|-..-.=.-++.+ +..+-.+|||
T Consensus 145 clawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWd 224 (445)
T KOG2139|consen 145 CLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWD 224 (445)
T ss_pred EEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEc
Confidence 3444433 5679999999999997554211111000 12233333333332221222332 6668999999
Q ss_pred CCCCeEE
Q psy6185 70 GKNEEEE 76 (79)
Q Consensus 70 ~~~~~~I 76 (79)
..++..+
T Consensus 225 pdtg~~~ 231 (445)
T KOG2139|consen 225 PDTGQKI 231 (445)
T ss_pred CCCCCcc
Confidence 8877654
No 186
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=21.37 E-value=1.1e+02 Score=20.47 Aligned_cols=21 Identities=14% Similarity=0.063 Sum_probs=19.2
Q ss_pred eeeccCCCCEEEEEcCCceEEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLF 23 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIy 23 (79)
|++|.+|+ =+||+++++.-|+
T Consensus 9 ~l~WS~Dg-~laV~t~~~v~IL 29 (173)
T PF12657_consen 9 ALAWSEDG-QLAVATGESVHIL 29 (173)
T ss_pred CeeECCCC-CEEEEcCCeEEEE
Confidence 78999998 7899999999999
No 187
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=21.18 E-value=43 Score=28.10 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=17.1
Q ss_pred CCCeEEEEEecccceEEEec
Q psy6185 39 QEDVCIVERLFSSSLVAVVS 58 (79)
Q Consensus 39 ~g~v~ivEmLf~snLlalVg 58 (79)
.=|+.+||||+-+.++.+..
T Consensus 634 ~FgLslVEM~h~s~WIlLsA 653 (671)
T PF15390_consen 634 TFGLSLVEMLHGSHWILLSA 653 (671)
T ss_pred HhCcchhhhhhCCeEEEEec
Confidence 35899999999998888775
No 188
>KOG1524|consensus
Probab=20.78 E-value=83 Score=26.44 Aligned_cols=22 Identities=14% Similarity=-0.016 Sum_probs=20.2
Q ss_pred eeeccCCCCEEEEEcCCceEEE
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLF 23 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIy 23 (79)
-++|..|++=++|||.+|--|+
T Consensus 261 nlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 261 NLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred EEEEcCCCceeeccccCceEEE
Confidence 4789999999999999999887
No 189
>KOG0777|consensus
Probab=20.78 E-value=12 Score=28.22 Aligned_cols=11 Identities=64% Similarity=0.736 Sum_probs=10.3
Q ss_pred EEEEecccceE
Q psy6185 44 IVERLFSSSLV 54 (79)
Q Consensus 44 ivEmLf~snLl 54 (79)
|||||+.|||+
T Consensus 63 ivemLHNsSLL 73 (322)
T KOG0777|consen 63 IVEMLHNSSLL 73 (322)
T ss_pred HHHHHhcccee
Confidence 79999999997
No 190
>COG3737 Uncharacterized conserved protein [Function unknown]
Probab=20.73 E-value=83 Score=21.14 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=19.2
Q ss_pred cCCCeEEEEEecccceEEEecc
Q psy6185 38 SQEDVCIVERLFSSSLVAVVSL 59 (79)
Q Consensus 38 ~~g~v~ivEmLf~snLlalVg~ 59 (79)
..|++.+.+|-|+.|++.+=.+
T Consensus 22 G~Gg~R~a~~sh~~SlL~lpdg 43 (127)
T COG3737 22 GAGGFRFADMSHRGSLLVLPDG 43 (127)
T ss_pred cCCceEeccccccccEEEecCc
Confidence 4799999999999999988654
No 191
>KOG0294|consensus
Probab=20.73 E-value=4.2e+02 Score=20.77 Aligned_cols=69 Identities=19% Similarity=0.116 Sum_probs=33.3
Q ss_pred eeeccCCCCEEEEEcCCceEEEecCCcchhheeee--ccCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCC
Q psy6185 2 CSVPLKGLLSLSVGTKSGYRLFSLNSIDTLEQIYE--NSQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNE 73 (79)
Q Consensus 2 ~~~fNQD~sc~~vgt~~GfrIyn~~~~d~~~~~~~--~~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~ 73 (79)
|+-|-....|+.-|.+.-.+.++++.--|+..... .-..++...+.=+. -||+-+ .+...++|||-...
T Consensus 213 ~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~-~~lvTa--SSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 213 CATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEH-EYLVTA--SSDGFIKVWDIDME 283 (362)
T ss_pred eeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCc-eEEEEe--ccCceEEEEEcccc
Confidence 44454444455444444677777553222222111 11233333333222 155444 67789999996554
No 192
>KOG0650|consensus
Probab=20.59 E-value=1.1e+02 Score=25.93 Aligned_cols=27 Identities=19% Similarity=0.103 Sum_probs=23.4
Q ss_pred CeeeccCCCCEEEEEcCCceEEEecCC
Q psy6185 1 MCSVPLKGLLSLSVGTKSGYRLFSLNS 27 (79)
Q Consensus 1 ~~~~fNQD~sc~~vgt~~GfrIyn~~~ 27 (79)
+++.|-+-..+|.|+|..-.|||++..
T Consensus 570 q~v~FHPs~p~lfVaTq~~vRiYdL~k 596 (733)
T KOG0650|consen 570 QRVKFHPSKPYLFVATQRSVRIYDLSK 596 (733)
T ss_pred eEEEecCCCceEEEEeccceEEEehhH
Confidence 367899999999999999999998643
No 193
>COG2828 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.59 E-value=77 Score=24.78 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=19.5
Q ss_pred cceEEEecc-----------CCCcEEEEEeCCCCeEEe
Q psy6185 51 SSLVAVVSL-----------SSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 51 snLlalVg~-----------~~prkL~I~d~~~~~~I~ 77 (79)
-||+|-||. ..--.++||+..+++.|.
T Consensus 96 GNl~AaVGpFAIe~GLV~a~~g~t~VRI~~~Nt~k~I~ 133 (378)
T COG2828 96 GNLLAAVGPFAIEAGLVDAAEGVTAVRIWNVNTGKTIE 133 (378)
T ss_pred cchhhccchhhhhhCcccCCCCceEEEEEeccCcceEE
Confidence 477888874 222479999999987763
No 194
>KOG2444|consensus
Probab=20.12 E-value=3.6e+02 Score=19.93 Aligned_cols=61 Identities=20% Similarity=0.145 Sum_probs=32.1
Q ss_pred EEEEEcCCce-EEEecCCcchhheeeec-----cCCCeEEEEEecccceEEEeccCCCcEEEEEeCCCCeEEe
Q psy6185 11 SLSVGTKSGY-RLFSLNSIDTLEQIYEN-----SQEDVCIVERLFSSSLVAVVSLSSPRKLTKEEGKNEEEEK 77 (79)
Q Consensus 11 c~~vgt~~Gf-rIyn~~~~d~~~~~~~~-----~~g~v~ivEmLf~snLlalVg~~~prkL~I~d~~~~~~I~ 77 (79)
-++||+.+|+ .+||.+- +..+.++ +....+|.+ -++++++.||+.+ .+++-||.+.++..+
T Consensus 72 ~~~vG~~dg~v~~~n~n~---~g~~~d~~~s~~e~i~~~Ip~--~~~~~~~c~~~~d-g~ir~~n~~p~k~~g 138 (238)
T KOG2444|consen 72 KLMVGTSDGAVYVFNWNL---EGAHSDRVCSGEESIDLGIPN--GRDSSLGCVGAQD-GRIRACNIKPNKVLG 138 (238)
T ss_pred eEEeecccceEEEecCCc---cchHHHhhhcccccceecccc--ccccceeEEeccC-CceeeeccccCceee
Confidence 4678888875 4555331 1222221 223333332 2556667777544 455777777666554
Done!