Diaphorina citri psyllid: psy6187

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------
MIADTTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVGDRINGIFLQLISCLQCKRCPNYFVPQLDLFKGKTPSSLENAAKQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQACDKCDYRESVKMIADTTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVEFITASGYLSARKMRSRFQTLVAQACDKLSKTRDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLQCRRCPHYFLPHLDLFKGKSPSALENAAKQVWRLTRELLTNSRALDKL
ccccccEEEEEEccEEEEEEEEEEECccccccccccccccccccccHHHHHHHHHcccEEEccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccccEEEECcccccccCEEEcccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHcccccccEEEcccccEEEEEEccEEEEEEEEEEECccccccccccccccccccccHHHHHHHHHcccEEEEcccccccccccccccccHHccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHccccccEEEcccccccccccccHHccHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHc
****TTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVGDRINGIFLQLISCLQCKRCPNYFVPQLDLFKGKTPSSLENAAKQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQACDKCDYRESVKMIADTTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVEFITASGYLSARKMRSRFQTLVAQACDKLSKTRDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLQCRRCPHYFLPHLDLFKGKSPSALENAAKQVWRLTRELLTNSRALDK*
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MIADTTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVGDRINGIFLQLISCLQCKRCPNYFVPQLDLFKGKTPSSLENAAKQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQACDKCDYRESVKMIADTTEVKLRILGKYVVQITPAFKCAGVWPRSASQWPQPDIAWPHPSIVAEIKAEGFDLLSKETFNITGKQSALEGDAWVMSFLEVEKRLLLGGCRRKCLSVLKTLRNRHLDLPGNPITNYCMKSLLLYECEKHPSENDWEDHCVEFITASGYLSARKMRSRFQTLVAQACDKLSKTRDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLQCRRCPHYFLPHLDLFKGKSPSALENAAKQVWRLTRELLTNSRALDKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein mab-21-like 1 Required for several aspects of embryonic development including normal development of the eye.confidentQ8AY65
Protein mab-21 confidentQ29H56
Protein mab-21-like 2 Required for several aspects of embryonic development including normal development of the eye, notochord, neural tube and other organ tissues, and for embryonic turning.confidentQ8BPP1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0043010 [BP]camera-type eye developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0008284 [BP]positive regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0010172 [BP]embryonic body morphogenesisprobableGO:0048598, GO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0010171, GO:0009653, GO:0007275, GO:0044699
GO:0048048 [BP]embryonic eye morphogenesisprobableGO:0048598, GO:0032502, GO:0009887, GO:0048562, GO:0044707, GO:0007423, GO:0048568, GO:0048592, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699, GO:0032501
GO:0007399 [BP]nervous system developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PX5, chain A
Confidence level:probable
Coverage over the Query: 7-175
View the alignment between query and template
View the model in PyMOL
Template: 1PX5, chain A
Confidence level:probable
Coverage over the Query: 518-550,568-662
View the alignment between query and template
View the model in PyMOL