BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6189
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58DQ5|RT09_BOVIN 28S ribosomal protein S9, mitochondrial OS=Bos taurus GN=MRPS9 PE=1
SV=3
Length = 396
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 204/339 (60%), Gaps = 4/339 (1%)
Query: 201 AYLKRAEDYTSFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKA 260
A L+R F++ + + +G+RHLANMMG D ETFTQ+D+D AI YL PSGL+ K+A
Sbjct: 62 AALRRESYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRA 121
Query: 261 RPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLR 320
RP MKHPEE+FP ++ ++ GRP+HFLFYTGK + Y L H A + L+ E +D
Sbjct: 122 RPIMKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKV--LHAEERQDQL 179
Query: 321 NPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHE 380
K SE S+ L + W+ +E LE + VE ++ +Y QF+ ++ RL E
Sbjct: 180 RAKGL-FSEKSKSKDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEE 238
Query: 381 EFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINE 440
EF+ ++R+ +++ E Q E G+ F +T RK A A+ VY G+GKI IN
Sbjct: 239 EFVGRFRRTVTVQSKKHLIEPLQYDEQGMAF-STGQGKRKTANAEAVVYGHGSGKIEING 297
Query: 441 KHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVE 500
Y YFP DR+QLMFP F D L K D+ +V GG S QAGAIR +S L +F+
Sbjct: 298 VDYLLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGGGRSSQAGAIRLAMSRALCSFIT 357
Query: 501 PEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 358 EDEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR 396
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 70/96 (72%)
Query: 63 AYLKRAEDYTNFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKA 122
A L+R +F++ + F +G+RHLANMMG D ETFTQ+D+D AI YL PSGL+ K+A
Sbjct: 62 AALRRESYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRA 121
Query: 123 RPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
RP MKHPEE+FP ++ ++ GRP+HFLFYT + S
Sbjct: 122 RPIMKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQS 157
>sp|Q9D7N3|RT09_MOUSE 28S ribosomal protein S9, mitochondrial OS=Mus musculus GN=Mrps9
PE=1 SV=3
Length = 390
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 209/352 (59%), Gaps = 11/352 (3%)
Query: 189 MFDRTKVSKAMQAYLKRAEDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAI 247
+ T V+ R E YT F++ + + +G+RHLANMMG D ETF ++DID AI
Sbjct: 49 LIHTTVVTTKKNVQASRQESYTEDFIKKQIEEFNIGKRHLANMMGEDPETFAEEDIDRAI 108
Query: 248 AYLMPSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVL 307
AYL PSGL+ K+ARP MKHPE +FP ++ ++ GRP+HFLFYTGK + Y L H+
Sbjct: 109 AYLFPSGLFEKRARPMMKHPEHIFPKQRATQWGEDGRPFHFLFYTGKQSYYSLMHDVYGK 168
Query: 308 IRKLNKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVM 367
+ +L K R P AS SR+L + W+ +E LE + VE ++ +Y QF+ ++
Sbjct: 169 VMQLEKH-----RGP--LSASAESRDL--IGSRWLIKEELEEMLVEKLSDEDYAQFIRLL 219
Query: 368 TRLVNHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVT 427
+L+ EEF+ ++R+ I++ E Q E G+ F +T + RK A A
Sbjct: 220 EKLLTLPCGPAEEEFVQRFRRSVTIQSKKQLIEPVQYDEQGMAF-STSEGRRKSATAQAV 278
Query: 428 VYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAI 487
VY+ G+GKI +N Y YFP DR+QLMFP F D L + D+ +V GG S QAGAI
Sbjct: 279 VYEHGSGKIHVNGVDYLIYFPITQDREQLMFPFHFLDRLERHDVTCTVSGGGRSAQAGAI 338
Query: 488 RWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
R ++ L +FV + E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 339 RLAMARALCSFVTEDEVEWMRQAGLLTPDPRIRERKKPGQEGARRKFTWKKR 390
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 51 MFDRTKVSKAMQAYLKRAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAI 109
+ T V+ R E YT +F++ + F +G+RHLANMMG D ETF ++DID AI
Sbjct: 49 LIHTTVVTTKKNVQASRQESYTEDFIKKQIEEFNIGKRHLANMMGEDPETFAEEDIDRAI 108
Query: 110 AYLMPSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
AYL PSGL+ K+ARP MKHPE +FP ++ ++ GRP+HFLFYT + S
Sbjct: 109 AYLFPSGLFEKRARPMMKHPEHIFPKQRATQWGEDGRPFHFLFYTGKQS 157
>sp|P82933|RT09_HUMAN 28S ribosomal protein S9, mitochondrial OS=Homo sapiens GN=MRPS9
PE=1 SV=2
Length = 396
Score = 272 bits (695), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 207/334 (61%), Gaps = 5/334 (1%)
Query: 207 EDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMK 265
E YT F++ + + +G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP MK
Sbjct: 67 ETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMK 126
Query: 266 HPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQT 325
HPE++FP ++ ++ GRP+H+LFYTGK + Y L H+ ++ L K + L+
Sbjct: 127 HPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSH-LQAKSLL 185
Query: 326 QASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFIFK 385
+R+ + + W+ +E LE + VE ++ +Y QF+ ++ +L+ + EEF+ +
Sbjct: 186 PEKTVTRD--VIGSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEFVQR 243
Query: 386 YRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFD 445
+R+ +++ E Q E G+ F + + RK A+A+ VY+ G+G+I +N Y
Sbjct: 244 FRRSVTLESKKQLIEPVQYDEQGMAF-SKSEGKRKTAKAEAIVYKHGSGRIKVNGIDYQL 302
Query: 446 YFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRE 505
YFP DR+QLMFP F D L K D+ +V GG S QAGAIR ++ L +FV + E
Sbjct: 303 YFPITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDEVE 362
Query: 506 RMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 363 WMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR 396
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 69 EDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMK 127
E YT +F++ + F +G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP MK
Sbjct: 67 ETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMK 126
Query: 128 HPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
HPE++FP ++ ++ GRP+H+LFYT + S
Sbjct: 127 HPEQIFPRQRAIQWGEDGRPFHYLFYTGKQS 157
>sp|P34388|RT09_CAEEL Probable 40S ribosomal protein S9, mitochondrial OS=Caenorhabditis
elegans GN=F09G8.3 PE=3 SV=2
Length = 392
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 180/369 (48%), Gaps = 29/369 (7%)
Query: 194 KVSKAMQAYLKRAEDYTSFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPS 253
K+ KA++ YLK ++ + + ME + +E GRRHLA MM D+ Q+ ID AI YL PS
Sbjct: 30 KIGKALETYLKHSQQHVAMMEKHRAEFETGRRHLAKMMSLDIHELDQEAIDRAILYLFPS 89
Query: 254 GLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNK 313
GL ARP M+ P+E+ P + FD G+P F+T P +Y L + V + K
Sbjct: 90 GLTDPNARPVMRPPDEILPKFQRFTFDEEGKPEGSRFFTLSPKIYGLLSDIGVKTHSVMK 149
Query: 314 MEDEDL--RNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLV 371
DE + R+ ++ A+ L+ ++W++ + L++ E +K Y Q + L
Sbjct: 150 FYDEHVGSRSVNRSDLEPAN----LSGSQWVTADKLKKKLSEKFSKELYGQVIIAFEHLA 205
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMN--FDPEEPQAGEDGVKFVTTKDCPRKC--ARADVT 427
+ + + ++F+ ++R+P T + F P P+ V + +C RA V
Sbjct: 206 SLPGSAIEQKFLMEFREPMTASTGSKLFGPAIPEVHVCAVTNRRYAEVTTRCKDTRATVK 265
Query: 428 VYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVAS------------- 474
V G GK I+ D F R+ L+ P+I + L + D+ A+
Sbjct: 266 VTDAGKGKFDIDGLQLHD-FRHLQAREILLAPMIVSQSLGRFDVTATTSCISNTLPEAPN 324
Query: 475 ----VREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARA 530
+R GG S A+R G + + ++PE E +RL+GLLT D R+ ER K Q A
Sbjct: 325 KAPLMRSGGMSALPRAVRHGTALCVAA-LQPEAIEPLRLSGLLTLDPRKNERSKVNQPGA 383
Query: 531 RKKFTWKKR 539
R K+ WK+R
Sbjct: 384 RAKWIWKRR 392
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 56 KVSKAMQAYLKRAEDYTNFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPS 115
K+ KA++ YLK ++ + ME + FE GRRHLA MM D+ Q+ ID AI YL PS
Sbjct: 30 KIGKALETYLKHSQQHVAMMEKHRAEFETGRRHLAKMMSLDIHELDQEAIDRAILYLFPS 89
Query: 116 GLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYT 154
GL ARP M+ P+E+ P + FD G+P F+T
Sbjct: 90 GLTDPNARPVMRPPDEILPKFQRFTFDEEGKPEGSRFFT 128
>sp|Q6G3I7|RS9_BARHE 30S ribosomal protein S9 OS=Bartonella henselae (strain ATCC 49882
/ Houston 1) GN=rpsI PE=3 SV=1
Length = 161
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PG+GKITIN K + YF R L P++ T+ + DI+A+V G
Sbjct: 43 RKDAVARVWI-KPGSGKITINNKEFDKYFARPVLRMILRQPIVATNRDTQFDIIATVAGG 101
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EPE+R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 102 GLSGQAGAVRHGISKAL-TYYEPELRTILKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 160
Query: 539 R 539
R
Sbjct: 161 R 161
>sp|C6C1K0|RS9_DESAD 30S ribosomal protein S9 OS=Desulfovibrio salexigens (strain ATCC
14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rpsI PE=3
SV=1
Length = 130
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A +Y+ GTG IT+N K Y DYFP + + + PL T L K DI + G
Sbjct: 12 RKNAVARTRLYE-GTGAITVNGKPYEDYFPRKTLQMIVQQPLKLTKTLGKFDIKVNADGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G +GQA A+R GIS L ++PE+R ++ AGLLTRD R+KERKK GQ AR KF + K
Sbjct: 71 GVAGQAQAVRHGISRALIE-IDPELRSILKRAGLLTRDARKKERKKYGQPGARAKFQYSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q38UV5|RS9_LACSS 30S ribosomal protein S9 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rpsI PE=3 SV=1
Length = 130
Score = 98.2 bits (243), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 431 PGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
PGTGKITIN K DY P N + PL T+ + DI+ +V GG SGQAGAIR G
Sbjct: 23 PGTGKITINNKDVVDYVPFANLILDMKQPLTITETTDSYDILVNVNGGGFSGQAGAIRHG 82
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
IS L V+P+ R ++ AG+LTRD R KERKKPG +ARK + KR
Sbjct: 83 ISRALLT-VDPDFRPALKSAGMLTRDPRMKERKKPGLKKARKASQFSKR 130
>sp|A9IVX6|RS9_BART1 30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rpsI PE=3 SV=1
Length = 161
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PG+GKI IN K + YF R L P++ T+ + DIVA+V G
Sbjct: 43 RKDAVARVWI-KPGSGKIIINNKEFDKYFARPVLRMILRQPIVATNRDTQFDIVATVAGG 101
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GIS L + EPE+R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 102 GLSGQAGAIRHGISKAL-TYYEPELRPILKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 160
Query: 539 R 539
R
Sbjct: 161 R 161
>sp|Q757I0|RT09_ASHGO 37S ribosomal protein S9, mitochondrial OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=MRPS9 PE=3 SV=1
Length = 279
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 35/261 (13%)
Query: 290 FYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALER 349
FY+ P L+RK K + R + AS+ R W+S +
Sbjct: 43 FYSANPAHEAHMDRLEALLRKHTKQQAR--RVAVERTASDRPR--------WLSFDQYAL 92
Query: 350 ITVEPITKP-EYQQFVAVMTRL-------VNHKYAYLHEEFIFKYR---QPKVIKTMNFD 398
I KP +Y+Q V+V+ RL N + A E F+ K R Q V + ++
Sbjct: 93 IGGTSRLKPTQYRQLVSVLDRLHAIDPQLSNGEIAATLEAFLRKSRLEEQNVVRQELDHL 152
Query: 399 PEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMF 458
G RK + A V + + G+G++ +N + + DYF DR +M+
Sbjct: 153 GRACAVGR------------RKTSSAKVWLVR-GSGEVLVNGRTFADYFSKIKDRDAIMY 199
Query: 459 PLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFR 518
PL D K +I A+VR GG +GQA AI ++ L F P ++ R+ AG+LTRD+R
Sbjct: 200 PLRVLDAAGKYNIFAAVRGGGVTGQAEAIMHAVAKALVVF-NPLLKTRLHRAGVLTRDYR 258
Query: 519 RKERKKPGQARARKKFTWKKR 539
ERKKPG+ +ARK W KR
Sbjct: 259 HVERKKPGKRKARKMPAWVKR 279
>sp|Q6BIJ5|RT09_DEBHA 37S ribosomal protein S9, mitochondrial OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=MRPS9 PE=3 SV=2
Length = 323
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 290 FYTGKPNLYELFHNANVLIRKLNKM-----EDEDLRNPKQTQASEASRELYLTNTEWMSQ 344
FY G P E + N LIRK + +D++++N K S E Y T + ++
Sbjct: 87 FYGGNPVHEENLNTLNGLIRKYINLPTRIVDDKEIQNTK-----FVSFEEYKTRIQSGTR 141
Query: 345 EALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQA 404
++PI E Q + H+ + E + + + K N E +A
Sbjct: 142 -------LKPIHHKELTQLL--------HRLRSIDPELMPREVSDVLAKFANTSSESAKA 186
Query: 405 GEDGVKFVTTKDCPRKCA-----RADVTVY-QPGTGKITINEKHYFDYFPDENDRQQLMF 458
+ K T + R + R+ VY G G++ +N K +YFP E DR+++ +
Sbjct: 187 AQ---KVKTLDEFGRAISLGKRKRSVAKVYLTKGDGQVMVNGKSLLEYFPKEADRRRIAY 243
Query: 459 PLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFR 518
P + ++ A V+ GG +GQA A+ +GI+ L F P ++ R+ +GL+TRD R
Sbjct: 244 PFQVVSQEGQYNVFAEVQSGGSTGQAEAVMYGIAKDLVIF-NPLLKSRLHKSGLMTRDAR 302
Query: 519 RKERKKPGQARARKKFTWKKR 539
+ ERKKPG+ +ARK TW KR
Sbjct: 303 KVERKKPGKVKARKSPTWVKR 323
>sp|Q57DW2|RS9_BRUAB 30S ribosomal protein S9 OS=Brucella abortus biovar 1 (strain
9-941) GN=rpsI PE=3 SV=1
Length = 158
Score = 96.3 bits (238), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L ++ EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKALTDY-EPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|Q2YND9|RS9_BRUA2 30S ribosomal protein S9 OS=Brucella abortus (strain 2308) GN=rpsI
PE=3 SV=1
Length = 158
Score = 96.3 bits (238), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L ++ EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKALTDY-EPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|B2S535|RS9_BRUA1 30S ribosomal protein S9 OS=Brucella abortus (strain S19) GN=rpsI
PE=3 SV=1
Length = 158
Score = 96.3 bits (238), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L ++ EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKALTDY-EPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|C0RIC5|RS9_BRUMB 30S ribosomal protein S9 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.9 bits (237), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|Q8G1C9|RS9_BRUSU 30S ribosomal protein S9 OS=Brucella suis biovar 1 (strain 1330)
GN=rpsI PE=3 SV=1
Length = 158
Score = 95.9 bits (237), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|B0CLB7|RS9_BRUSI 30S ribosomal protein S9 OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.9 bits (237), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|A5VPX4|RS9_BRUO2 30S ribosomal protein S9 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.9 bits (237), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|A9MAG7|RS9_BRUC2 30S ribosomal protein S9 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.9 bits (237), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|Q8YGJ0|RS9_BRUME 30S ribosomal protein S9 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.5 bits (236), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|A0ALT2|RS9_LISW6 30S ribosomal protein S9 OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=rpsI PE=3 SV=1
Length = 130
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + PG GKI IN + + DY P R+ + PL+ T+ L D++ +VR G
Sbjct: 12 RKSSVARVRLV-PGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVRGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQAGAIR G++ L V PE R ++ AGLLTRD R KERKKPG AR+ + K
Sbjct: 71 GYTGQAGAIRHGVARALLQ-VAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|A6X1V5|RS9_OCHA4 30S ribosomal protein S9 OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=rpsI PE=3 SV=1
Length = 158
Score = 95.5 bits (236), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PGTGKIT+N+K + YF + L P++ ++ + DIVA+V G
Sbjct: 40 RKDAVARVWV-KPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGG 98
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 99 GLSGQAGAVRHGISKAL-TYYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 157
Query: 539 R 539
R
Sbjct: 158 R 158
>sp|Q9P4C1|RT09_KLUMA 37S ribosomal protein S9, mitochondrial OS=Kluyveromyces marxianus
GN=MRPS9 PE=3 SV=1
Length = 292
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V + G G+I +N++ DYF DR+ +M+PL D + K +I A V G
Sbjct: 174 RKTATAKVYVVR-GEGQILVNDRALNDYFVKMKDRESIMYPLKAIDSVGKYNIFAMVSGG 232
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G + QA AI I L F P ++ R+ +G+LTRD+R ERKKPG+ +ARK TW K
Sbjct: 233 GTTAQADAIMHAIGKALVTF-NPLLKTRLHRSGVLTRDYRHVERKKPGKRKARKMPTWVK 291
Query: 539 R 539
R
Sbjct: 292 R 292
>sp|B3QKG4|RS9_RHOPT 30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rpsI PE=3 SV=1
Length = 160
Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PG GKIT+N + YF R + PL+ + D++ +V G
Sbjct: 42 RKDAVARVWI-KPGAGKITVNSREVETYFARPVLRMMIQQPLVAAARAGQYDVICTVAGG 100
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L NF EPE+R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 101 GLSGQAGAVRHGISKALTNF-EPELRSVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 159
Query: 539 R 539
R
Sbjct: 160 R 160
>sp|Q6N650|RS9_RHOPA 30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rpsI PE=1 SV=1
Length = 160
Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PG GKIT+N + YF R + PL+ + D++ +V G
Sbjct: 42 RKDAVARVWI-KPGAGKITVNSREVETYFARPVLRMMIQQPLVAAARAGQYDVICTVAGG 100
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L NF EPE+R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 101 GLSGQAGAVRHGISKALTNF-EPELRSVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 159
Query: 539 R 539
R
Sbjct: 160 R 160
>sp|A1UT84|RS9_BARBK 30S ribosomal protein S9 OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=rpsI PE=3 SV=1
Length = 161
Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PGTGKIT+N K + YF R L P++ + D+VA+V G
Sbjct: 43 RKDAVARVWI-KPGTGKITVNNKEFEQYFARPVLRMILRQPIVIAKRDTQYDVVATVAGG 101
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 102 GLSGQAGAIRHGISKAL-TYYEPALRTILKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 160
Query: 539 R 539
R
Sbjct: 161 R 161
>sp|Q03PZ0|RS9_LACBA 30S ribosomal protein S9 OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=rpsI PE=3 SV=1
Length = 130
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + PG+GKI +N K DY P + R+ ++ P T+ L D + +VR G
Sbjct: 12 RKNSSARVRLV-PGSGKIVMNNKAIEDYIPFASIREVVLQPFNVTETLGNYDALVTVRGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA R GI+ L V+P+ R ++ AGLLTRD R KERKKPG +ARK + K
Sbjct: 71 GFSGQAGATRHGIARALLE-VDPDFRGPLKRAGLLTRDARMKERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q88XU7|RS9_LACPL 30S ribosomal protein S9 OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=rpsI PE=3 SV=1
Length = 130
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 431 PGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
PGTGKI +N+K DY P + R++L+ P T+ ++ D++ +V GG GQAGA R G
Sbjct: 23 PGTGKIVMNDKSVEDYIPFADIRKELLQPFEVTETTDQYDVLVNVNGGGFHGQAGATRHG 82
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
I+ L V+P+ R ++ AGLLTRD R KERKKPG +ARK + KR
Sbjct: 83 IARALLE-VDPDFRTPLKRAGLLTRDARMKERKKPGLKKARKASQFSKR 130
>sp|Q982W9|RS9_RHILO 30S ribosomal protein S9 OS=Rhizobium loti (strain MAFF303099)
GN=rpsI PE=3 SV=1
Length = 160
Score = 94.0 bits (232), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PG+GKI +N+K + YF + L P+I ++ + DIVA+V G
Sbjct: 42 RKNAIARVWV-KPGSGKIVVNDKEFATYFARPVLQMILNQPIIASNRSGQYDIVATVVGG 100
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 101 GLSGQAGAVRHGISKAL-TYYEPALRAVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 159
Query: 539 R 539
R
Sbjct: 160 R 160
>sp|Q2RSE4|RS9_RHORT 30S ribosomal protein S9 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rpsI PE=3 SV=1
Length = 158
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 401 EPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPL 460
EP+ G + T + RK A A V + + G+G+IT+N + +YFP R + P
Sbjct: 25 EPKRDAQGRSYATGR---RKDAVARVWI-KAGSGRITVNGRELENYFPRPVLRMVINQPF 80
Query: 461 IFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRK 520
+ T+ N+ D+V +V GG SGQAGA+R GIS L + +P+MR ++ G +TRD R
Sbjct: 81 VVTNTTNQFDVVCTVTGGGLSGQAGALRHGISRAL-TYFDPDMRPALKAEGFMTRDPRTV 139
Query: 521 ERKKPGQARARKKFTWKKR 539
ERKK G+A+AR+ F + KR
Sbjct: 140 ERKKYGRAKARRSFQFSKR 158
>sp|B6IMQ2|RS9_RHOCS 30S ribosomal protein S9 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rpsI PE=3 SV=1
Length = 161
Score = 94.0 bits (232), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 395 MNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQ 454
++ +P+EP+ ++G + T K RK A A V + +PG+GKI +N + YF R
Sbjct: 22 LSAEPQEPKLDKEGRAYATGK---RKDAVARVWI-KPGSGKIIVNGRDLGVYFARPVLRM 77
Query: 455 QLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLT 514
+ P +++ D++ +V GG SGQAGA+R GIS L + EP +R ++ AGLLT
Sbjct: 78 MINQPFSIVARVDQYDVMCTVSGGGLSGQAGALRHGISKAL-TYYEPALRPALKAAGLLT 136
Query: 515 RDFRRKERKKPGQARARKKFTWKKR 539
RD R ERKK G+A+AR+ F + KR
Sbjct: 137 RDPRVVERKKYGRAKARRSFQFSKR 161
>sp|Q6CJ65|RT09_KLULA 37S ribosomal protein S9, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=MRPS9 PE=3 SV=1
Length = 297
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V V + G GKI +N++ DYF DR+ +M+PL D + K ++ A V G
Sbjct: 179 RKTSTAKVYVVR-GEGKILVNDRQLNDYFVKMKDRESVMYPLKAIDSVGKYNVFAMVSGG 237
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G +GQA A+ I L F P ++ R+ +G+LTRD+R ERKKPG+ +ARK TW K
Sbjct: 238 GITGQADALMHAIGKALVAF-NPLLKTRLHRSGVLTRDYRHVERKKPGKRKARKMPTWVK 296
Query: 539 R 539
R
Sbjct: 297 R 297
>sp|Q6FZQ5|RS9_BARQU 30S ribosomal protein S9 OS=Bartonella quintana (strain Toulouse)
GN=rpsI PE=3 SV=1
Length = 161
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + +PG GKITIN K + YF R L P++ + + DI+A+V G
Sbjct: 43 RKGAVARVWL-KPGFGKITINNKEFDKYFARPVLRMILRQPIVAINRDTQFDIIATVTGG 101
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GIS L + EPE R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 102 GLSGQAGAVRHGISKAL-TYYEPEFRTILKKRGFLTRDSRVVERKKYGKAKARRSFQFSK 160
Query: 539 R 539
R
Sbjct: 161 R 161
>sp|Q8Y459|RS9_LISMO 30S ribosomal protein S9 OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + PG GKI IN + + DY P R+ + PL+ T+ L D++ +V G
Sbjct: 12 RKSSVARVRLV-PGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQAGAIR G++ L V PE R ++ AGLLTRD R KERKKPG AR+ + K
Sbjct: 71 GYTGQAGAIRHGVARALLQ-VAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|A4XJ60|RS9_CALS8 30S ribosomal protein S9 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rpsI PE=3 SV=2
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + PG GKI +N+K+ +YFP E R + PL T+ LNK D++A V+ G
Sbjct: 12 RKTSVAKVWL-SPGNGKIIVNDKNMEEYFPLETLRIIVKQPLTLTETLNKYDVIAKVKGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GI+ L +P +R ++ AG LTRD R ERKK G +AR+ + K
Sbjct: 71 GLSGQAGALRHGIARAL-VLADPTLRPVLKKAGFLTRDPRMVERKKYGLKKARRAPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q03EE9|RS9_PEDPA 30S ribosomal protein S9 OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 431 PGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
PGTGKIT+N++ +Y P N RQ ++ P T+ D++A+V GG SGQ+GAIR G
Sbjct: 23 PGTGKITVNDRPIEEYIPFANLRQVVVQPFGVTETNGNYDVIANVNGGGFSGQSGAIRHG 82
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
I+ L + V+P+ R ++ AGLLTRD R KERKK G +ARK + KR
Sbjct: 83 IARALLD-VDPDFRAPLKKAGLLTRDPRMKERKKYGLKKARKAAQFSKR 130
>sp|C1CC86|RS9_STRZJ 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain JJA)
GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q8CWU4|RS9_STRR6 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|B2ISM4|RS9_STRPS 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain
CGSP14) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|B1I922|RS9_STRPI 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|C1CB69|RS9_STRP7 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain 70585)
GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|B5E6W9|RS9_STRP4 30S ribosomal protein S9 OS=Streptococcus pneumoniae serotype 19F
(strain G54) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q04MF5|RS9_STRP2 30S ribosomal protein S9 OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|A9EYT5|RS9_SORC5 30S ribosomal protein S9 OS=Sorangium cellulosum (strain So ce56)
GN=rpsI PE=3 SV=1
Length = 130
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTG I +N++ DYF E R + L ++L++ D+ A+V G
Sbjct: 12 RKTAVARVFL-SPGTGNIKVNQRPADDYFVRETSRMVMRQSLELLELLDQFDVSATVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
GHS QA A+R GI+ L ++PE R ++ AG LTRD R+KERKK GQ ARK+F + K
Sbjct: 71 GHSAQAEAMRHGIARALCE-LDPERRPSLKRAGFLTRDARKKERKKYGQPGARKRFQYSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|A3DGC4|RS9_CLOTH 30S ribosomal protein S9 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rpsI PE=3 SV=1
Length = 130
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 431 PGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
PG GKI INE+ DYF E + + PL+ TD L K D++ V GG++GQAGAIR G
Sbjct: 23 PGDGKIIINERELDDYFGLETLKTIVKQPLVLTDTLGKFDVLCKVAGGGYTGQAGAIRHG 82
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
IS L F E E+R ++ AG LTRD R KERKK G +AR+ + KR
Sbjct: 83 ISRALLKFDE-ELRPALKKAGFLTRDPRMKERKKYGLKKARRAPQFSKR 130
>sp|C1CPG8|RS9_STRZT 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=rpsI PE=3 SV=1
Length = 130
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVIGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|C1CIH6|RS9_STRZP 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain P1031)
GN=rpsI PE=3 SV=1
Length = 130
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVIGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q97SN4|RS9_STRPN 30S ribosomal protein S9 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=rpsI PE=3 SV=1
Length = 130
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVIGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|B8ZL30|RS9_STRPJ 30S ribosomal protein S9 OS=Streptococcus pneumoniae (strain ATCC
700669 / Spain 23F-1) GN=rpsI PE=3 SV=1
Length = 130
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + PGTGKIT+N+K +Y P + R + P T + D+ +V G
Sbjct: 12 RKNAVARVRLV-PGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGSYDVFVNVIGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQ+GAIR GI+ L V+P+ R+ ++ AGLLTRD R+ ERKKPG +ARK + K
Sbjct: 71 GYAGQSGAIRHGIARALLQ-VDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>sp|Q1MIP3|RS9_RHIL3 30S ribosomal protein S9 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rpsI PE=3 SV=1
Length = 155
Score = 92.8 bits (229), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V +PG+GKIT+N K + +YF + L P++ + DIVA+V G
Sbjct: 37 RKNAVARVWV-KPGSGKITVNGKEFAEYFARPVLQMILRQPIVAAARDGQFDIVATVAGG 95
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R G+S L F EP +R ++ G LTRD R ERKK G+A+AR+ F + K
Sbjct: 96 GLSGQAGAVRHGVSKALTYF-EPGLRAVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSK 154
Query: 539 R 539
R
Sbjct: 155 R 155
>sp|Q9A8H6|RS9_CAUCR 30S ribosomal protein S9 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=rpsI PE=3 SV=1
Length = 157
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 399 PEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMF 458
P EP+ G + T K RK A A V + +PG G ITIN + YF R +
Sbjct: 22 PAEPKIDAQGRAYATGK---RKNAIARVWI-KPGKGSITINGRDQEVYFARPVLRMMIAQ 77
Query: 459 PLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFR 518
PL TD L + D+V +V G SGQAGAIR G+S L + EP +R ++ G LTRD R
Sbjct: 78 PLEVTDRLGQFDVVVTVEGSGLSGQAGAIRHGLSKAL-TYYEPGLRPVLKPHGFLTRDSR 136
Query: 519 RKERKKPGQARARKKFTWKKR 539
ERKK G+A+AR+ F + KR
Sbjct: 137 VVERKKYGKAKARRSFQFSKR 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,694,824
Number of Sequences: 539616
Number of extensions: 9724264
Number of successful extensions: 26695
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 25333
Number of HSP's gapped (non-prelim): 748
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)