Your job contains 1 sequence.
>psy6189
MSLQRLFQRNCRLSFLARFSSKTPNPPDKPNEPSELAKETANIPETPHHDMFDRTKVSKA
MQAYLKRAEDYTNFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSK
KARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFSSKTPNPPDKPNEPSELAKETAN
IPETPHHDMFDRTKVSKAMQAYLKRAEDYTSFMEGEKHSYEVGRRHLANMMGRDVETFTQ
KDIDEAIAYLMPSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYEL
FHNANVLIRKLNKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEY
QQFVAVMTRLVNHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRK
CARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGH
SGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6189
(539 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037529 - symbol:mRpS9 "mitochondrial ribosomal pr... 932 1.3e-93 1
ZFIN|ZDB-GENE-060825-257 - symbol:zgc:153172 "zgc:153172"... 759 2.7e-75 1
UNIPROTKB|E2RKY3 - symbol:MRPS9 "Uncharacterized protein"... 718 6.1e-71 1
UNIPROTKB|Q58DQ5 - symbol:MRPS9 "28S ribosomal protein S9... 715 1.3e-70 1
MGI|MGI:1916777 - symbol:Mrps9 "mitochondrial ribosomal p... 705 1.4e-69 1
RGD|1306558 - symbol:Mrps9 "mitochondrial ribosomal prote... 704 1.8e-69 1
UNIPROTKB|P82933 - symbol:MRPS9 "28S ribosomal protein S9... 696 1.3e-68 1
UNIPROTKB|F1P4R6 - symbol:MRPS9 "Uncharacterized protein"... 685 1.9e-67 1
UNIPROTKB|I3LU08 - symbol:MRPS9 "Uncharacterized protein"... 455 1.2e-47 2
WB|WBGene00017319 - symbol:mrps-9 species:6239 "Caenorhab... 350 1.2e-31 1
TAIR|locus:2101373 - symbol:AT3G49080 species:3702 "Arabi... 289 4.9e-24 2
SGD|S000000350 - symbol:MRPS9 "Mitochondrial ribosomal pr... 253 6.7e-21 1
UNIPROTKB|P0A7X3 - symbol:rpsI "30S ribosomal subunit pro... 229 2.7e-18 1
UNIPROTKB|P66639 - symbol:rpsI "30S ribosomal protein S9"... 217 5.5e-17 1
TIGR_CMR|SPO_1692 - symbol:SPO_1692 "ribosomal protein S9... 217 5.5e-17 1
UNIPROTKB|Q9KUF0 - symbol:rpsI "30S ribosomal protein S9"... 214 1.2e-16 1
TIGR_CMR|CPS_4442 - symbol:CPS_4442 "ribosomal protein S9... 214 1.2e-16 1
TIGR_CMR|VC_0571 - symbol:VC_0571 "ribosomal protein S9" ... 214 1.2e-16 1
TIGR_CMR|CHY_2273 - symbol:CHY_2273 "ribosomal protein S9... 213 1.5e-16 1
TIGR_CMR|BA_0144 - symbol:BA_0144 "ribosomal protein S9" ... 210 3.1e-16 1
POMBASE|SPAC29A4.03c - symbol:SPAC29A4.03c "mitochondrial... 207 6.6e-16 1
TIGR_CMR|GSU_2875 - symbol:GSU_2875 "ribosomal protein S9... 205 1.1e-15 1
TIGR_CMR|SO_3939 - symbol:SO_3939 "ribosomal protein S9" ... 205 1.1e-15 1
DICTYBASE|DDB_G0292882 - symbol:DDB_G0292882 "28S ribosom... 218 1.8e-15 1
TIGR_CMR|NSE_0839 - symbol:NSE_0839 "ribosomal protein S9... 197 8.0e-15 1
TIGR_CMR|ECH_1018 - symbol:ECH_1018 "ribosomal protein S9... 190 4.6e-14 1
CGD|CAL0003535 - symbol:MRPS9 species:5476 "Candida albic... 206 4.8e-14 1
UNIPROTKB|O94150 - symbol:MRPS9 "37S ribosomal protein S9... 206 4.8e-14 1
TIGR_CMR|DET_0506 - symbol:DET_0506 "ribosomal protein S9... 188 7.5e-14 1
TIGR_CMR|APH_1107 - symbol:APH_1107 "ribosomal protein S9... 184 2.0e-13 1
TIGR_CMR|CBU_1748 - symbol:CBU_1748 "ribosomal protein S9... 183 2.6e-13 1
ASPGD|ASPL0000002338 - symbol:AN6564 species:162425 "Emer... 196 5.5e-13 1
TAIR|locus:2037222 - symbol:RPS9 "ribosomal protein S9" s... 172 4.0e-12 1
TIGR_CMR|CJE_1652 - symbol:CJE_1652 "ribosomal protein S9... 168 1.1e-11 1
UNIPROTKB|I3LK28 - symbol:I3LK28 "Uncharacterized protein... 124 5.9e-07 1
GENEDB_PFALCIPARUM|PF11_0382 - symbol:PF11_0382 "ribosoma... 131 1.3e-05 1
UNIPROTKB|Q8IHZ4 - symbol:PF11_0382 "Mitochondrial riboso... 131 1.3e-05 1
>FB|FBgn0037529 [details] [associations]
symbol:mRpS9 "mitochondrial ribosomal protein S9"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] InterPro:IPR000754 Pfam:PF00380 EMBL:AE014297
GO:GO:0006412 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103
PANTHER:PTHR21569 CTD:64965 GeneTree:ENSGT00390000011204
OMA:ARPVMKH EMBL:AY089671 RefSeq:NP_524270.2 UniGene:Dm.2469
SMR:Q8SXF0 MINT:MINT-942222 STRING:Q8SXF0
EnsemblMetazoa:FBtr0081766 GeneID:40932 KEGG:dme:Dmel_CG2957
UCSC:CG2957-RA FlyBase:FBgn0037529 InParanoid:Q8SXF0
OrthoDB:EOG4XGXFH GenomeRNAi:40932 NextBio:821347 Uniprot:Q8SXF0
Length = 395
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 181/348 (52%), Positives = 248/348 (71%)
Query: 192 RTKVSKAMQAYLKRAEDYTSFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 251
+ +VSKAM+AYLKRA ++ FM+ + +++G+RHLANMMG D ETFTQ+DIDEAI+YL
Sbjct: 52 KQRVSKAMRAYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLF 111
Query: 252 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKL 311
PSGLY +KARP MK PE VFP +K AEFD GRP+H +FYTGKPN ++L H+ ++ +
Sbjct: 112 PSGLYDQKARPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGKPNFFQLLHD---IVEET 168
Query: 312 NKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLV 371
NK+ D + R ++ + +++L + + + ++ LE + VE I EY F M RL+
Sbjct: 169 NKLADLEERMLRRGNKPDENQKLEIAGFQLLPKDQLELLLVESIADIEYSNFTNSMDRLI 228
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQP 431
YAY + FI +Y +P + ++ + +P+ E+G +++TT +C RK ARADVTV P
Sbjct: 229 ASPYAYKSKAFIERYMKPLMDQSKQLEVPKPRIDEEGRQYITTYECLRKTARADVTVRLP 288
Query: 432 GTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGI 491
GTGKI+IN K YF DEN R+QL+FPL F+++L KVD+ A+V GG SGQAGAIRWGI
Sbjct: 289 GTGKISINGKD-ISYFEDENCREQLLFPLQFSELLGKVDVEANVEGGGPSGQAGAIRWGI 347
Query: 492 SWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ LR+FV+ EM E MRLAGLLTRD+RR+ERKK GQ AR+K+TWKKR
Sbjct: 348 AMSLRSFVDQEMIESMRLAGLLTRDYRRRERKKFGQEGARRKYTWKKR 395
Score = 357 (130.7 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 65/103 (63%), Positives = 82/103 (79%)
Query: 54 RTKVSKAMQAYLKRAEDYTNFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 113
+ +VSKAM+AYLKRA ++ FM+ + F++G+RHLANMMG D ETFTQ+DIDEAI+YL
Sbjct: 52 KQRVSKAMRAYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLF 111
Query: 114 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTAR 156
PSGLY +KARP MK PE VFP +K AEFD GRP+H +FYT +
Sbjct: 112 PSGLYDQKARPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGK 154
>ZFIN|ZDB-GENE-060825-257 [details] [associations]
symbol:zgc:153172 "zgc:153172" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000754 Pfam:PF00380 ZFIN:ZDB-GENE-060825-257
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000020877
HOVERGEN:HBG023132 OrthoDB:EOG4WWRJR EMBL:BC122171 IPI:IPI00786723
RefSeq:NP_001038861.1 UniGene:Dr.37156 ProteinModelPortal:Q0P4B8
STRING:Q0P4B8 PRIDE:Q0P4B8 GeneID:751681 KEGG:dre:751681
InParanoid:Q0P4B8 NextBio:20917830 Bgee:Q0P4B8 Uniprot:Q0P4B8
Length = 385
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 155/328 (47%), Positives = 212/328 (64%)
Query: 212 FMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMKHPEEVF 271
F++ + +E+G+RHLANMMG D ETFTQ+D+D +IAYL PSGL+ K ARP MKHPE++F
Sbjct: 62 FIDKQVEEFEIGKRHLANMMGEDPETFTQEDVDRSIAYLFPSGLFEKHARPVMKHPEQIF 121
Query: 272 PPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQTQASEAS 331
P +K ++D GRP+HFLFYTGK + Y L H+ + + K +D+ +RN A +
Sbjct: 122 PKQKAVQWDAEGRPFHFLFYTGKQSYYSLMHDVYDKMLVVEKHQDK-MRNKGLFMAD--T 178
Query: 332 RELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFIFKYRQPKV 391
+++ L+ + W+ +E +E I VE I+ +Y +F+ + RL++ Y L E FI K+R+P
Sbjct: 179 KQISLSGSRWLLKEEMEEILVENISDQDYLRFIQLAERLLSMPYCSLEENFILKFRKPLE 238
Query: 392 IKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDEN 451
+++ + E Q GV F + D RK A+A VT+ G+G ITIN +Y YFP
Sbjct: 239 VQSREQEIPELQHDARGVAF-SVADGRRKSAKARVTLIDSGSGNITINGTNYLHYFPVLQ 297
Query: 452 DRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAG 511
DR+QLMFPL F +L + DI SV G S QAGA+R IS L +FV E+MR AG
Sbjct: 298 DREQLMFPLHFVGLLGRFDIEGSVEGSGRSSQAGAVRLAISRALLSFVSEGEVEKMRQAG 357
Query: 512 LLTRDFRRKERKKPGQARARKKFTWKKR 539
LLT D R KERKKPGQ +ARKKFTWKKR
Sbjct: 358 LLTADPRIKERKKPGQEKARKKFTWKKR 385
Score = 296 (109.3 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 74 FMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMKHPEEVF 133
F++ + FE+G+RHLANMMG D ETFTQ+D+D +IAYL PSGL+ K ARP MKHPE++F
Sbjct: 62 FIDKQVEEFEIGKRHLANMMGEDPETFTQEDVDRSIAYLFPSGLFEKHARPVMKHPEQIF 121
Query: 134 PPKKDAEFDNLGRPYHFLFYTARFS 158
P +K ++D GRP+HFLFYT + S
Sbjct: 122 PKQKAVQWDAEGRPFHFLFYTGKQS 146
>UNIPROTKB|E2RKY3 [details] [associations]
symbol:MRPS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 CTD:64965
GeneTree:ENSGT00390000011204 OMA:ARPVMKH EMBL:AAEX03007418
RefSeq:XP_531774.2 Ensembl:ENSCAFT00000003351 GeneID:474545
KEGG:cfa:474545 Uniprot:E2RKY3
Length = 395
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 159/350 (45%), Positives = 214/350 (61%)
Query: 193 TKVSKAMQAYLKRAEDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 251
T VS R E YT F++ + + +G+RHLANMMG D ETFTQ+DID+AIAYL
Sbjct: 53 TGVSTKKNVAALRRETYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDKAIAYLF 112
Query: 252 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKL 311
PSGL+ K+ARP MKHPE++FP ++ ++ GRP+HFLFYTGK Y L H A KL
Sbjct: 113 PSGLFEKQARPIMKHPEQIFPKQRAIQWGEDGRPFHFLFYTGKQAYYSLMHEA---YGKL 169
Query: 312 NKMEDEDLRNPKQTQA--SEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTR 369
+E E +N Q + SE ++ L ++ W+ +E LE + VE ++ +Y QF+ ++ R
Sbjct: 170 --LEVEKRQNQLQAKGLFSEKTKTKDLIDSRWLIKEELEEMLVEKLSDQDYAQFIRLLER 227
Query: 370 LVNHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVY 429
L+ + EEF+ ++R+ I++ E Q E G+ F +T + RK A+A+ VY
Sbjct: 228 LLT-LHCGSEEEFVQRFRRSVTIQSKKQLIEPVQYDEQGMAF-STSEGKRKSAKAEAIVY 285
Query: 430 QPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRW 489
G+G+I +N Y YFP DR+QLMFP F D L K D +V GG S QAGAIR
Sbjct: 286 GHGSGRIKVNGIDYLLYFPVTQDREQLMFPFHFLDRLGKHDTTCTVSGGGRSSQAGAIRL 345
Query: 490 GISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
++ L +FV E E MR AGLLT D R KERKKPGQ AR+KFTWKKR
Sbjct: 346 AVARALCSFVTEEEVEWMRQAGLLTADPRVKERKKPGQEGARRKFTWKKR 395
Score = 300 (110.7 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 56/103 (54%), Positives = 74/103 (71%)
Query: 55 TKVSKAMQAYLKRAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 113
T VS R E YT +F++ + F +G+RHLANMMG D ETFTQ+DID+AIAYL
Sbjct: 53 TGVSTKKNVAALRRETYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDKAIAYLF 112
Query: 114 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTAR 156
PSGL+ K+ARP MKHPE++FP ++ ++ GRP+HFLFYT +
Sbjct: 113 PSGLFEKQARPIMKHPEQIFPKQRAIQWGEDGRPFHFLFYTGK 155
>UNIPROTKB|Q58DQ5 [details] [associations]
symbol:MRPS9 "28S ribosomal protein S9, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569
EMBL:BT021186 EMBL:BT021542 EMBL:BT026199 EMBL:BC109583
IPI:IPI00696615 IPI:IPI00760442 IPI:IPI00814981
RefSeq:NP_001030409.1 UniGene:Bt.53127 ProteinModelPortal:Q58DQ5
STRING:Q58DQ5 Ensembl:ENSBTAT00000008093 GeneID:519302
KEGG:bta:519302 CTD:64965 GeneTree:ENSGT00390000011204
HOGENOM:HOG000020877 HOVERGEN:HBG023132 InParanoid:Q58DQ5
OMA:ARPVMKH OrthoDB:EOG4WWRJR NextBio:20872851 Uniprot:Q58DQ5
Length = 396
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 152/336 (45%), Positives = 205/336 (61%)
Query: 205 RAEDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPY 263
R E YT F++ + + +G+RHLANMMG D ETFTQ+D+D AI YL PSGL+ K+ARP
Sbjct: 65 RRESYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRARPI 124
Query: 264 MKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPK 323
MKHPEE+FP ++ ++ GRP+HFLFYTGK + Y L H A + + +D+ LR
Sbjct: 125 MKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEERQDQ-LR--A 181
Query: 324 QTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFI 383
+ SE S+ L + W+ +E LE + VE ++ +Y QF+ ++ RL EEF+
Sbjct: 182 KGLFSEKSKSKDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEEEFV 241
Query: 384 FKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHY 443
++R+ +++ E Q E G+ F T + RK A A+ VY G+GKI IN Y
Sbjct: 242 GRFRRTVTVQSKKHLIEPLQYDEQGMAFSTGQG-KRKTANAEAVVYGHGSGKIEINGVDY 300
Query: 444 FDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEM 503
YFP DR+QLMFP F D L K D+ +V GG S QAGAIR +S L +F+ +
Sbjct: 301 LLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGGGRSSQAGAIRLAMSRALCSFITEDE 360
Query: 504 RERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 361 VEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR 396
Score = 298 (110.0 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 53/93 (56%), Positives = 70/93 (75%)
Query: 67 RAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPY 125
R E YT +F++ + F +G+RHLANMMG D ETFTQ+D+D AI YL PSGL+ K+ARP
Sbjct: 65 RRESYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRARPI 124
Query: 126 MKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
MKHPEE+FP ++ ++ GRP+HFLFYT + S
Sbjct: 125 MKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQS 157
>MGI|MGI:1916777 [details] [associations]
symbol:Mrps9 "mitochondrial ribosomal protein S9"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 MGI:MGI:1916777
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569 CTD:64965
GeneTree:ENSGT00390000011204 HOGENOM:HOG000020877
HOVERGEN:HBG023132 OMA:ARPVMKH OrthoDB:EOG4WWRJR EMBL:AK009082
EMBL:BC051936 EMBL:BC069980 EMBL:BC116437 IPI:IPI00336292
RefSeq:NP_076003.3 UniGene:Mm.252982 ProteinModelPortal:Q9D7N3
SMR:Q9D7N3 STRING:Q9D7N3 PhosphoSite:Q9D7N3 PaxDb:Q9D7N3
PRIDE:Q9D7N3 Ensembl:ENSMUST00000057208 GeneID:69527 KEGG:mmu:69527
InParanoid:Q14AZ3 NextBio:329674 Bgee:Q9D7N3 CleanEx:MM_MRPS9
Genevestigator:Q9D7N3 GermOnline:ENSMUSG00000060679 Uniprot:Q9D7N3
Length = 390
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 152/348 (43%), Positives = 208/348 (59%)
Query: 193 TKVSKAMQAYLKRAEDYTS-FMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 251
T V+ R E YT F++ + + +G+RHLANMMG D ETF ++DID AIAYL
Sbjct: 53 TVVTTKKNVQASRQESYTEDFIKKQIEEFNIGKRHLANMMGEDPETFAEEDIDRAIAYLF 112
Query: 252 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKL 311
PSGL+ K+ARP MKHPE +FP ++ ++ GRP+HFLFYTGK + Y L H+ + +L
Sbjct: 113 PSGLFEKRARPMMKHPEHIFPKQRATQWGEDGRPFHFLFYTGKQSYYSLMHDVYGKVMQL 172
Query: 312 NKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLV 371
K R P AS SR+L + W+ +E LE + VE ++ +Y QF+ ++ +L+
Sbjct: 173 EKH-----RGP--LSASAESRDLI--GSRWLIKEELEEMLVEKLSDEDYAQFIRLLEKLL 223
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQP 431
EEF+ ++R+ I++ E Q E G+ F +T + RK A A VY+
Sbjct: 224 TLPCGPAEEEFVQRFRRSVTIQSKKQLIEPVQYDEQGMAF-STSEGRRKSATAQAVVYEH 282
Query: 432 GTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGI 491
G+GKI +N Y YFP DR+QLMFP F D L + D+ +V GG S QAGAIR +
Sbjct: 283 GSGKIHVNGVDYLIYFPITQDREQLMFPFHFLDRLERHDVTCTVSGGGRSAQAGAIRLAM 342
Query: 492 SWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ L +FV + E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 343 ARALCSFVTEDEVEWMRQAGLLTPDPRIRERKKPGQEGARRKFTWKKR 390
Score = 293 (108.2 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 54/105 (51%), Positives = 72/105 (68%)
Query: 55 TKVSKAMQAYLKRAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 113
T V+ R E YT +F++ + F +G+RHLANMMG D ETF ++DID AIAYL
Sbjct: 53 TVVTTKKNVQASRQESYTEDFIKKQIEEFNIGKRHLANMMGEDPETFAEEDIDRAIAYLF 112
Query: 114 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
PSGL+ K+ARP MKHPE +FP ++ ++ GRP+HFLFYT + S
Sbjct: 113 PSGLFEKRARPMMKHPEHIFPKQRATQWGEDGRPFHFLFYTGKQS 157
>RGD|1306558 [details] [associations]
symbol:Mrps9 "mitochondrial ribosomal protein S9" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=ISO]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
RGD:1306558 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 HOVERGEN:HBG023132 EMBL:BC088242
IPI:IPI00357889 UniGene:Rn.13913 ProteinModelPortal:Q5I0K4
STRING:Q5I0K4 UCSC:RGD:1306558 InParanoid:Q5I0K4
ArrayExpress:Q5I0K4 Genevestigator:Q5I0K4 Uniprot:Q5I0K4
Length = 338
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 153/348 (43%), Positives = 213/348 (61%)
Query: 193 TKVSKAMQAYLKRAEDYTS-FMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 251
T V+ A R E YT F+ + + +G+RHLANMMG D ETFT++DID AIAYL
Sbjct: 1 TVVTTKKNAQASRQESYTEDFIRKQIEEFNLGKRHLANMMGEDPETFTEEDIDRAIAYLF 60
Query: 252 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKL 311
PSGL+ K+ARP MKHPE++FP ++ ++ GRP+HFLFYTGK + Y L H+ + +L
Sbjct: 61 PSGLFEKRARPMMKHPEQIFPKQRAIQWGEDGRPFHFLFYTGKQSYYSLMHDVYGKVLQL 120
Query: 312 NKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLV 371
K R P ++ +E SR+L + W+ +E LE + VE ++ +Y QF+ ++ +L+
Sbjct: 121 EKH-----RGPL-SENTE-SRDLI--GSRWLIKEELEEMLVEKLSDQDYTQFIRLLEKLL 171
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQP 431
E+F+ ++R+ +++ E Q E G+ F +T + RK A A V VYQ
Sbjct: 172 TLPCGPAEEDFVQRFRRSVTVQSKKQLIEPVQYDEQGMAF-STSEGRRKSATARVVVYQH 230
Query: 432 GTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGI 491
G+GKI +N Y YFP DR+QLMFP F D L K D+ +V GG S QAGAIR +
Sbjct: 231 GSGKIHVNGVDYLLYFPILQDREQLMFPFHFLDRLEKHDVTCTVSGGGRSAQAGAIRLAM 290
Query: 492 SWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ L +F+ + E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 291 AKALCSFITEDEVEWMRQAGLLTPDPRIRERKKPGQEGARRKFTWKKR 338
Score = 307 (113.1 bits), Expect = 7.9e-27, P = 7.9e-27
Identities = 68/165 (41%), Positives = 96/165 (58%)
Query: 55 TKVSKAMQAYLKRAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLM 113
T V+ A R E YT +F+ + F +G+RHLANMMG D ETFT++DID AIAYL
Sbjct: 1 TVVTTKKNAQASRQESYTEDFIRKQIEEFNLGKRHLANMMGEDPETFTEEDIDRAIAYLF 60
Query: 114 PSGLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFSSKTPNPPDKPNEPSE 173
PSGL+ K+ARP MKHPE++FP ++ ++ GRP+HFLFYT + S D + +
Sbjct: 61 PSGLFEKRARPMMKHPEQIFPKQRAIQWGEDGRPFHFLFYTGK-QSYYSLMHDVYGKVLQ 119
Query: 174 LAKETANIPE-TPHHDMF-DRTKVSKAMQAYLKRA---EDYTSFM 213
L K + E T D+ R + + ++ L +DYT F+
Sbjct: 120 LEKHRGPLSENTESRDLIGSRWLIKEELEEMLVEKLSDQDYTQFI 164
>UNIPROTKB|P82933 [details] [associations]
symbol:MRPS9 "28S ribosomal protein S9, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0042769 "DNA damage response, detection of DNA damage"
evidence=NAS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=NAS] [GO:0043043 "peptide biosynthetic process"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0003735 EMBL:CH471127 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763
GO:GO:0043043 GO:GO:0042769 eggNOG:COG0103 PANTHER:PTHR21569
CTD:64965 HOGENOM:HOG000020877 HOVERGEN:HBG023132 OMA:ARPVMKH
OrthoDB:EOG4WWRJR EMBL:AC010884 EMBL:AC107080 EMBL:AC104655
EMBL:BC057240 IPI:IPI00641924 RefSeq:NP_872578.1 UniGene:Hs.590900
ProteinModelPortal:P82933 SMR:P82933 IntAct:P82933
MINT:MINT-1379488 STRING:P82933 PhosphoSite:P82933 DMDM:218511769
PaxDb:P82933 PRIDE:P82933 Ensembl:ENST00000258455 GeneID:64965
KEGG:hsa:64965 UCSC:uc002tcn.4 GeneCards:GC02P105654
HGNC:HGNC:14501 MIM:611975 neXtProt:NX_P82933 PharmGKB:PA31028
InParanoid:P82933 PhylomeDB:P82933 GenomeRNAi:64965 NextBio:67144
ArrayExpress:P82933 Bgee:P82933 CleanEx:HS_MRPS9
Genevestigator:P82933 GermOnline:ENSG00000135972 Uniprot:P82933
Length = 396
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 143/336 (42%), Positives = 208/336 (61%)
Query: 205 RAEDYTS-FMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPY 263
+ E YT F++ + + +G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP
Sbjct: 65 KRETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPV 124
Query: 264 MKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPK 323
MKHPE++FP ++ ++ GRP+H+LFYTGK + Y L H+ ++ L K + L+
Sbjct: 125 MKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSH-LQAKS 183
Query: 324 QTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFI 383
+R++ + W+ +E LE + VE ++ +Y QF+ ++ +L+ + EEF+
Sbjct: 184 LLPEKTVTRDVI--GSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEFV 241
Query: 384 FKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHY 443
++R+ +++ E Q E G+ F + + RK A+A+ VY+ G+G+I +N Y
Sbjct: 242 QRFRRSVTLESKKQLIEPVQYDEQGMAF-SKSEGKRKTAKAEAIVYKHGSGRIKVNGIDY 300
Query: 444 FDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEM 503
YFP DR+QLMFP F D L K D+ +V GG S QAGAIR ++ L +FV +
Sbjct: 301 QLYFPITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDE 360
Query: 504 RERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
E MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 361 VEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR 396
Score = 291 (107.5 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 52/93 (55%), Positives = 71/93 (76%)
Query: 67 RAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPY 125
+ E YT +F++ + F +G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP
Sbjct: 65 KRETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPV 124
Query: 126 MKHPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
MKHPE++FP ++ ++ GRP+H+LFYT + S
Sbjct: 125 MKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQS 157
>UNIPROTKB|F1P4R6 [details] [associations]
symbol:MRPS9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000011204
OMA:ARPVMKH EMBL:AADN02017856 IPI:IPI00598056
Ensembl:ENSGALT00000027114 Uniprot:F1P4R6
Length = 348
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 142/334 (42%), Positives = 203/334 (60%)
Query: 207 EDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMK 265
E YT +F++ + +++G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP MK
Sbjct: 20 EKYTEAFIKKQIEEFDLGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFDKRARPMMK 79
Query: 266 HPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQT 325
HP E+FP ++ ++ GRP+HFLFYTGK + Y L H + + K +D+ +
Sbjct: 80 HPSEIFPEQRKIQWGEDGRPFHFLFYTGKQSYYSLMHETYEKLLNVQKHQDQLVAQGFSL 139
Query: 326 QASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFIFK 385
Q + + L + W+++ LE + +E ++ +Y +F+ ++ +L+ + + E +I K
Sbjct: 140 QKEKKN----LVGSRWLTKTELEGMLLEKLSDDDYSRFIRLLEKLMTLPCSDIEENYIKK 195
Query: 386 YRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFD 445
+ + ++ E + E GV F +T + RK +RA VY GTGKIT+N
Sbjct: 196 FSKEIAVQLQKVSTEPLKYDEQGVAF-STGEGVRKTSRATAVVYDNGTGKITVNGIDILR 254
Query: 446 YFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRE 505
YFP DR+QL+FP F D + K D + +V GG S QAGAIR + LR+FV E
Sbjct: 255 YFPVLQDREQLLFPFQFLDRVGKHDAICTVSGGGRSSQAGAIRLATAKALRSFVTETEVE 314
Query: 506 RMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
MR AGLLT D R +ERKKPGQ AR+KFTWKKR
Sbjct: 315 FMRQAGLLTVDPRVRERKKPGQEGARRKFTWKKR 348
Score = 292 (107.8 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 53/91 (58%), Positives = 69/91 (75%)
Query: 69 EDYTN-FMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPSGLYSKKARPYMK 127
E YT F++ + F++G+RHLANMMG D ETFTQ+DID AIAYL PSGL+ K+ARP MK
Sbjct: 20 EKYTEAFIKKQIEEFDLGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFDKRARPMMK 79
Query: 128 HPEEVFPPKKDAEFDNLGRPYHFLFYTARFS 158
HP E+FP ++ ++ GRP+HFLFYT + S
Sbjct: 80 HPSEIFPEQRKIQWGEDGRPFHFLFYTGKQS 110
>UNIPROTKB|I3LU08 [details] [associations]
symbol:MRPS9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569
GeneTree:ENSGT00390000011204 EMBL:FP326708
Ensembl:ENSSSCT00000027534 OMA:GQSHTAV Uniprot:I3LU08
Length = 261
Score = 455 (165.2 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 105/257 (40%), Positives = 148/257 (57%)
Query: 283 GRPYHFLFYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQTQASEASRELYLTNTEWM 342
GRP+HFLFYTGK + Y L H+ + + K ++ LR K A + + W+
Sbjct: 8 GRPFHFLFYTGKQSYYSLMHDTYGKLLDVEKHHNQ-LR-AKDLLAEKTKILKDPIGSRWL 65
Query: 343 SQEALERITVEPITKPEYQQFVAVMTRLVNHKYAYLHEEFIFKYRQPKVIKTMNFDPEEP 402
+E LE + VE ++ +Y QF+ ++ RL E+F+ ++R+ I++ E
Sbjct: 66 IKEELEEMLVEKLSDQDYAQFIRLLERLSALPCGATEEDFVNRFRRSIPIQSKKQLIEPL 125
Query: 403 QAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIF 462
Q E G+ F + + RK A+A+V VY G+G+I +N Y YFP DR+QLMFPL F
Sbjct: 126 QYDEQGMAF-SRGEGKRKTAKAEVVVYGQGSGRIDVNGVDYLLYFPVTQDREQLMFPLHF 184
Query: 463 TDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKER 522
D L K D+ +V GG S QAGA+R ++ L +FV + E MR AGLLT D R +ER
Sbjct: 185 LDRLGKHDMTCAVSGGGRSAQAGAVRLAMARALCSFVTEDEVEWMRQAGLLTADPRVRER 244
Query: 523 KKPGQARARKKFTWKKR 539
KKPGQ AR+KFTWKKR
Sbjct: 245 KKPGQEGARRKFTWKKR 261
Score = 60 (26.2 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 145 GRPYHFLFYTARFS 158
GRP+HFLFYT + S
Sbjct: 8 GRPFHFLFYTGKQS 21
>WB|WBGene00017319 [details] [associations]
symbol:mrps-9 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR000754 Pfam:PF00380 PROSITE:PS00360 GO:GO:0005739
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0005840
GO:GO:0040035 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:FO080289 PANTHER:PTHR21569
GeneTree:ENSGT00390000011204 HOGENOM:HOG000020877 OMA:ARPVMKH
PIR:S44795 RefSeq:NP_498815.1 ProteinModelPortal:P34388 SMR:P34388
STRING:P34388 PaxDb:P34388 EnsemblMetazoa:F09G8.3 GeneID:184267
KEGG:cel:CELE_F09G8.3 UCSC:F09G8.3 CTD:184267 WormBase:F09G8.3
eggNOG:NOG296891 InParanoid:P34388 NextBio:924138 Uniprot:P34388
Length = 392
Score = 350 (128.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 84/285 (29%), Positives = 139/285 (48%)
Query: 194 KVSKAMQAYLKRAEDYTSFMEGEKHSYEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPS 253
K+ KA++ YLK ++ + + ME + +E GRRHLA MM D+ Q+ ID AI YL PS
Sbjct: 30 KIGKALETYLKHSQQHVAMMEKHRAEFETGRRHLAKMMSLDIHELDQEAIDRAILYLFPS 89
Query: 254 GLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYTGKPNLYELFHNANVLIRKLNK 313
GL ARP M+ P+E+ P + FD G+P F+T P +Y L + V + K
Sbjct: 90 GLTDPNARPVMRPPDEILPKFQRFTFDEEGKPEGSRFFTLSPKIYGLLSDIGVKTHSVMK 149
Query: 314 MEDEDLRNPKQTQASEASRELYLTNTEWMSQEALERITVEPITKPEYQQFVAVMTRLVNH 373
DE + + + S+ L+ ++W++ + L++ E +K Y Q + L +
Sbjct: 150 FYDEHVGS-RSVNRSDLE-PANLSGSQWVTADKLKKKLSEKFSKELYGQVIIAFEHLASL 207
Query: 374 KYAYLHEEFIFKYRQPKVIKTMN--FDPEEPQAGEDGVKFVTTKDCPRKC--ARADVTVY 429
+ + ++F+ ++R+P T + F P P+ V + +C RA V V
Sbjct: 208 PGSAIEQKFLMEFREPMTASTGSKLFGPAIPEVHVCAVTNRRYAEVTTRCKDTRATVKVT 267
Query: 430 QPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVAS 474
G GK I+ D F R+ L+ P+I + L + D+ A+
Sbjct: 268 DAGKGKFDIDGLQLHD-FRHLQAREILLAPMIVSQSLGRFDVTAT 311
Score = 222 (83.2 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 56 KVSKAMQAYLKRAEDYTNFMEGEKHSFEVGRRHLANMMGRDVETFTQKDIDEAIAYLMPS 115
K+ KA++ YLK ++ + ME + FE GRRHLA MM D+ Q+ ID AI YL PS
Sbjct: 30 KIGKALETYLKHSQQHVAMMEKHRAEFETGRRHLAKMMSLDIHELDQEAIDRAILYLFPS 89
Query: 116 GLYSKKARPYMKHPEEVFPPKKDAEFDNLGRPYHFLFYT 154
GL ARP M+ P+E+ P + FD G+P F+T
Sbjct: 90 GLTDPNARPVMRPPDEILPKFQRFTFDEEGKPEGSRFFT 128
Score = 144 (55.7 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 50/145 (34%), Positives = 70/145 (48%)
Query: 412 VTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDI 471
VTT+ C K RA V V G GK I+ D F R+ L+ P+I + L + D+
Sbjct: 253 VTTR-C--KDTRATVKVTDAGKGKFDIDGLQLHD-FRHLQAREILLAPMIVSQSLGRFDV 308
Query: 472 VAS-----------------VREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLT 514
A+ +R GG S A+R G + + ++PE E +RL+GLLT
Sbjct: 309 TATTSCISNTLPEAPNKAPLMRSGGMSALPRAVRHGTALCVAA-LQPEAIEPLRLSGLLT 367
Query: 515 RDFRRKERKKPGQARARKKFTWKKR 539
D R+ ER K Q AR K+ WK+R
Sbjct: 368 LDPRKNERSKVNQPGARAKWIWKRR 392
>TAIR|locus:2101373 [details] [associations]
symbol:AT3G49080 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP002686 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
HAMAP:MF_00532_B EMBL:AY140063 EMBL:BT006583 EMBL:AK176622
IPI:IPI00546202 RefSeq:NP_190477.2 UniGene:At.35650
ProteinModelPortal:Q8L6Z4 SMR:Q8L6Z4 IntAct:Q8L6Z4 STRING:Q8L6Z4
PRIDE:Q8L6Z4 EnsemblPlants:AT3G49080.1 GeneID:824070
KEGG:ath:AT3G49080 TAIR:At3g49080 InParanoid:Q8L6Z4 OMA:GNEWEET
PhylomeDB:Q8L6Z4 ProtClustDB:CLSN2680367 Genevestigator:Q8L6Z4
Uniprot:Q8L6Z4
Length = 430
Score = 289 (106.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 67/137 (48%), Positives = 86/137 (62%)
Query: 403 QAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIF 462
Q E G + T + RKC+ A V + QPG GK +NEK + YFP + R L+ PL
Sbjct: 299 QVDETGRAYGTGR---RKCSIARVWI-QPGEGKFQVNEKEFDVYFPMLDHRAALLRPLAE 354
Query: 463 TDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKER 522
T L + DI +V+ GG +GQ GAI+ GIS L+N+ EP+MR +R AG LTRD R ER
Sbjct: 355 TKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNW-EPDMRTSLRAAGFLTRDSRVVER 413
Query: 523 KKPGQARARKKFTWKKR 539
KKPG+A+ARK F W KR
Sbjct: 414 KKPGKAKARKSFQWVKR 430
Score = 43 (20.2 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 3 LQRLFQRNCRLSFLARFSSKT 23
L RLF R+ L F+ SSK+
Sbjct: 2 LSRLFLRHSNLRFVTLVSSKS 22
>SGD|S000000350 [details] [associations]
symbol:MRPS9 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 SGD:S000000350 EMBL:BK006936 GO:GO:0003735
GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103
HOGENOM:HOG000019802 PANTHER:PTHR21569 GeneTree:ENSGT00390000011204
OrthoDB:EOG4Z0FFW EMBL:Z36015 PIR:S46017 RefSeq:NP_009704.1
ProteinModelPortal:P38120 SMR:P38120 DIP:DIP-4924N IntAct:P38120
MINT:MINT-534540 STRING:P38120 PaxDb:P38120 EnsemblFungi:YBR146W
GeneID:852443 KEGG:sce:YBR146W CYGD:YBR146w OMA:TFYSANP
NextBio:971345 Genevestigator:P38120 GermOnline:YBR146W
Uniprot:P38120
Length = 278
Score = 253 (94.1 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 78/252 (30%), Positives = 123/252 (48%)
Query: 290 FYTGKPNLYELFHNANVLIRKLNKMEDEDLRNPKQTQASEASRELYLTNTEWMSQEALER 349
FY+ PN + + L+RK K+ ++ +QT+A W+S +
Sbjct: 44 FYSANPNHEDRINRLERLLRKYIKLPSQNNNEAQQTKAP------------WISFDEYAL 91
Query: 350 ITVEPITKP-EYQQFVAVMTRLVNHKYAYLHEEFIFKYRQP-KVIKTMNFDPEEPQAGED 407
I KP +Y Q + ++ +L N ++E + Q K ++ + + E
Sbjct: 92 IGGGTKLKPTQYTQLLYMLNKLHNIDPQLTNDEITSELSQYYKKSSMLSNNIKIKTLDEF 151
Query: 408 GVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLN 467
G K RK + A V V + GTG+I +N + DYF DR+ +M+PL + +
Sbjct: 152 GRSIAVGK---RKSSTAKVFVVR-GTGEILVNGRQLNDYFLKMKDRESIMYPLQVIESVG 207
Query: 468 KVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQ 527
K +I A+ GG +GQA +I I+ L F P ++ R+ AG+LTRD+R ERKKPG+
Sbjct: 208 KYNIFATTSGGGPTGQAESIMHAIAKALVVF-NPLLKSRLHKAGVLTRDYRHVERKKPGK 266
Query: 528 ARARKKFTWKKR 539
+ARK TW KR
Sbjct: 267 KKARKMPTWVKR 278
>UNIPROTKB|P0A7X3 [details] [associations]
symbol:rpsI "30S ribosomal subunit protein S9"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
DrugBank:DB01017 DrugBank:DB00254 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW DrugBank:DB00759 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02130 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G
PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87
PDBsum:1VS5 PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9
PDBsum:2GYB PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN
PDBsum:2QB9 PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH
PDBsum:2QBJ PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0
PDBsum:2VHO PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K
PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C
PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z
PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z
PDBsum:3J10 PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ
PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP
PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I
PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2 DrugBank:DB00453
DrugBank:DB00618 DrugBank:DB00256 DrugBank:DB00595 DrugBank:DB00560
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:H65114
RefSeq:NP_417697.1 RefSeq:YP_491414.1 ProteinModelPortal:P0A7X3
SMR:P0A7X3 DIP:DIP-35799N IntAct:P0A7X3 MINT:MINT-1290939
PaxDb:P0A7X3 PRIDE:P0A7X3 EnsemblBacteria:EBESCT00000000423
EnsemblBacteria:EBESCT00000018245 GeneID:12933452 GeneID:949000
KEGG:ecj:Y75_p3150 KEGG:eco:b3230 PATRIC:32121886 EchoBASE:EB0901
EcoGene:EG10908 BioCyc:EcoCyc:EG10908-MONOMER
BioCyc:ECOL316407:JW3199-MONOMER EvolutionaryTrace:P0A7X3
Genevestigator:P0A7X3 Uniprot:P0A7X3
Length = 130
Score = 229 (85.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 53/121 (43%), Positives = 74/121 (61%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + +PG GKI IN++ YF E R + PL DM+ K+D+ +V+ G
Sbjct: 12 RKSSAARVFI-KPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GI+ L + E +R +R AG +TRD R+ ERKK G +AR++ + K
Sbjct: 71 GISGQAGAIRHGITRALMEYDE-SLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>UNIPROTKB|P66639 [details] [associations]
symbol:rpsI "30S ribosomal protein S9" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
PIR:H70976 RefSeq:NP_217959.1 RefSeq:NP_338074.1
RefSeq:YP_006516931.1 ProteinModelPortal:P66639 SMR:P66639
PRIDE:P66639 EnsemblBacteria:EBMYCT00000001879
EnsemblBacteria:EBMYCT00000070092 GeneID:13317049 GeneID:887488
GeneID:922956 KEGG:mtc:MT3547 KEGG:mtu:Rv3442c KEGG:mtv:RVBD_3442c
PATRIC:18129535 TubercuList:Rv3442c Uniprot:P66639
Length = 151
Score = 217 (81.4 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 50/109 (45%), Positives = 65/109 (59%)
Query: 431 PGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
PGTGK +N + DYFP++ +Q + PL+ D + DI A + GG SGQAGA+R G
Sbjct: 44 PGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLG 103
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
I+ L V PE R ++ AG LTRD R ERKK G +ARK + KR
Sbjct: 104 IARALI-LVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
>TIGR_CMR|SPO_1692 [details] [associations]
symbol:SPO_1692 "ribosomal protein S9" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_166931.1
ProteinModelPortal:Q5LSS4 SMR:Q5LSS4 GeneID:3193551
KEGG:sil:SPO1692 PATRIC:23376709 Uniprot:Q5LSS4
Length = 160
Score = 217 (81.4 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 55/142 (38%), Positives = 82/142 (57%)
Query: 398 DPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLM 457
+P EP E G + T K RK A A V + +PG+GK+ +N K YF + L
Sbjct: 24 EPREPVRDELGRSYATGK---RKDAVARVWI-KPGSGKVVVNGKDQDAYFARPVLQLILR 79
Query: 458 FPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDF 517
P + + D++A+V+ GG +GQAGA++ GIS L+ + +P +R ++ AG LTRD
Sbjct: 80 QPFQVAGVEGQFDVMATVKGGGLTGQAGAVKHGISKALQLY-DPSLRGALKAAGFLTRDS 138
Query: 518 RRKERKKPGQARARKKFTWKKR 539
R ERKK G+ +AR+ F + KR
Sbjct: 139 RVVERKKYGKRKARRSFQFSKR 160
>UNIPROTKB|Q9KUF0 [details] [associations]
symbol:rpsI "30S ribosomal protein S9" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
PIR:C82308 RefSeq:NP_230222.1 ProteinModelPortal:Q9KUF0 SMR:Q9KUF0
DNASU:2615248 GeneID:2615248 KEGG:vch:VC0571 PATRIC:20080258
Uniprot:Q9KUF0
Length = 130
Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 51/121 (42%), Positives = 73/121 (60%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + +PG+G I IN++ +YF + PL DM+ K+D+ +V+ G
Sbjct: 12 RKSSAARVFI-KPGSGNIVINKRSLEEYFGRPTSCMVVKQPLELVDMVEKLDLYITVKGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GI+ L + E +R +R AG +TRD RR ERKK G +AR++ + K
Sbjct: 71 GISGQAGAIRHGITRALMEYDE-SLRPVLRAAGYVTRDARRVERKKVGLRKARRRPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>TIGR_CMR|CPS_4442 [details] [associations]
symbol:CPS_4442 "ribosomal protein S9" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR HAMAP:MF_00532_B RefSeq:YP_271090.1 HSSP:P0A7X3
ProteinModelPortal:Q47VT2 SMR:Q47VT2 STRING:Q47VT2 GeneID:3519640
KEGG:cps:CPS_4442 PATRIC:21471721
BioCyc:CPSY167879:GI48-4451-MONOMER Uniprot:Q47VT2
Length = 130
Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 56/121 (46%), Positives = 71/121 (58%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + + G G ITIN++ +YF E R + PL +ML K D SV G
Sbjct: 12 RKSSTARVFM-KAGNGAITINKRDISEYFGRETARMVVRQPLELVEMLEKFDFNISVVGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GI+ L F E +R +R AG +TRD R+ ERKK G +ARKK + K
Sbjct: 71 GISGQAGAIRHGITRALMVFDET-LRGELRKAGFVTRDARKVERKKVGLHKARKKPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>TIGR_CMR|VC_0571 [details] [associations]
symbol:VC_0571 "ribosomal protein S9" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:C82308 RefSeq:NP_230222.1
ProteinModelPortal:Q9KUF0 SMR:Q9KUF0 DNASU:2615248 GeneID:2615248
KEGG:vch:VC0571 PATRIC:20080258 Uniprot:Q9KUF0
Length = 130
Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 51/121 (42%), Positives = 73/121 (60%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + +PG+G I IN++ +YF + PL DM+ K+D+ +V+ G
Sbjct: 12 RKSSAARVFI-KPGSGNIVINKRSLEEYFGRPTSCMVVKQPLELVDMVEKLDLYITVKGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAIR GI+ L + E +R +R AG +TRD RR ERKK G +AR++ + K
Sbjct: 71 GISGQAGAIRHGITRALMEYDE-SLRPVLRAAGYVTRDARRVERKKVGLRKARRRPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>TIGR_CMR|CHY_2273 [details] [associations]
symbol:CHY_2273 "ribosomal protein S9" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR HAMAP:MF_00532_B RefSeq:YP_361082.1
ProteinModelPortal:Q3A9V2 SMR:Q3A9V2 STRING:Q3A9V2 GeneID:3728242
KEGG:chy:CHY_2273 PATRIC:21277617
BioCyc:CHYD246194:GJCN-2272-MONOMER Uniprot:Q3A9V2
Length = 130
Score = 213 (80.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V V PG G ITIN K +YFP + + + PL T+ + K D+ A V G
Sbjct: 12 RKEAVARVFVV-PGEGNITINGKSLEEYFPRKTLQIIVKQPLELTNTVGKFDVKAKVHGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+R GI+ L +P +R ++ AG LTRD R ERKK G ++R++ W K
Sbjct: 71 GISGQAGAVRLGIARALVQ-ADPSLRPVLKKAGFLTRDPRMVERKKYGLRKSRRRPQWTK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>TIGR_CMR|BA_0144 [details] [associations]
symbol:BA_0144 "ribosomal protein S9" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
RefSeq:NP_842711.1 RefSeq:YP_016749.1 RefSeq:YP_026430.1
ProteinModelPortal:Q81VP8 SMR:Q81VP8 DNASU:1086438
EnsemblBacteria:EBBACT00000012383 EnsemblBacteria:EBBACT00000013924
EnsemblBacteria:EBBACT00000021050 GeneID:1086438 GeneID:2819069
GeneID:2850884 KEGG:ban:BA_0144 KEGG:bar:GBAA_0144 KEGG:bat:BAS0144
OMA:IKQGAAR ProtClustDB:PRK00132 BioCyc:BANT260799:GJAJ-155-MONOMER
BioCyc:BANT261594:GJ7F-157-MONOMER HAMAP:MF_00532_B Uniprot:Q81VP8
Length = 130
Score = 210 (79.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 51/121 (42%), Positives = 72/121 (59%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + G G++ IN + + +Y P R+ + PL+ T+ L D++ +V G
Sbjct: 12 RKSSVARVRLVS-GEGRVIINGRDFENYIPFAALREVVKQPLVATETLGNYDVLVNVNGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G++GQAGAIR GIS L +PE R ++ AGLLTRD R KERKK G AR+ + K
Sbjct: 71 GYTGQAGAIRHGISRALLK-ADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>POMBASE|SPAC29A4.03c [details] [associations]
symbol:SPAC29A4.03c "mitochondrial ribosomal protein
subunit Mrps9 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 PomBase:SPAC29A4.03c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103 HOGENOM:HOG000019802
PANTHER:PTHR21569 PIR:T38486 RefSeq:NP_594879.2 STRING:O14006
EnsemblFungi:SPAC29A4.03c.1 GeneID:2542620 OrthoDB:EOG4Z0FFW
NextBio:20803669 Uniprot:O14006
Length = 271
Score = 207 (77.9 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 59/204 (28%), Positives = 101/204 (49%)
Query: 340 EWMSQEALERITVEP-ITKPEYQQFVAVMTRLVNHKYAYLHE---EFIFKYRQPKVIKTM 395
+W + E ++ +P TK Y++ ++ L Y E + + K+ +P ++
Sbjct: 75 KWKTLEQYQKEFSDPKTTKVGYRKITRLLNELNEIVPEYRTEAVQKALEKFIRPDIVVKT 134
Query: 396 NFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQ 455
+ E+G+ K RK ++A V + PGTGK +N + YF R+
Sbjct: 135 TLKSQ--MLDENGMSITKGK---RKSSKATVKML-PGTGKFYVNGSPFDVYFQRMVHRKH 188
Query: 456 LMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTR 515
++PL + L ++ A+V GG +GQ+GA+ IS L EP +++ ++ +
Sbjct: 189 AVYPLAACNRLTNYNVWATVHGGGPTGQSGAVHAAISKSLI-LQEPSLKQVIKDTHCVLN 247
Query: 516 DFRRKERKKPGQARARKKFTWKKR 539
D R+ ERKK GQ +ARKK+TW KR
Sbjct: 248 DKRKVERKKTGQPKARKKYTWVKR 271
>TIGR_CMR|GSU_2875 [details] [associations]
symbol:GSU_2875 "ribosomal protein S9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_953917.1 ProteinModelPortal:Q748X5 SMR:Q748X5
GeneID:2688687 KEGG:gsu:GSU2875 PATRIC:22028611
BioCyc:GSUL243231:GH27-2864-MONOMER Uniprot:Q748X5
Length = 130
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 51/121 (42%), Positives = 70/121 (57%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + +PGTG I IN K +YF E + + PL + + DI +VR G
Sbjct: 12 RKSSVARVWL-KPGTGAIVINNKPIDEYFGRETSKMIVKQPLELVEKVGAFDIYVNVRGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGAI+ GI+ L V+ +R ++ AG +TRD R KERKK G+ AR+ + K
Sbjct: 71 GDSGQAGAIKHGITKALLE-VDVALRGTLKKAGFITRDSRIKERKKYGKRAARRSCQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>TIGR_CMR|SO_3939 [details] [associations]
symbol:SO_3939 "ribosomal protein S9" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_719470.1 ProteinModelPortal:Q8EAG3 SMR:Q8EAG3
GeneID:1171577 KEGG:son:SO_3939 PATRIC:23527556 Uniprot:Q8EAG3
Length = 130
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/121 (41%), Positives = 71/121 (58%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + G+G I +N++ YF E R + PL +M +K+DI +V+ G
Sbjct: 12 RKTSTARVFA-KAGSGNIVVNQRPLDQYFGRETARMVVRQPLELVEMTDKLDIYVTVKGG 70
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G +GQAGAIR GI+ L E +R +R AG +TRD R+ ERKK G +AR+K + K
Sbjct: 71 GITGQAGAIRHGITRALMQLDEA-LRPSLRSAGFVTRDARKVERKKVGLRKARRKPQFSK 129
Query: 539 R 539
R
Sbjct: 130 R 130
>DICTYBASE|DDB_G0292882 [details] [associations]
symbol:DDB_G0292882 "28S ribosomal protein S9,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000754 Pfam:PF00380
dictyBase:DDB_G0292882 GO:GO:0006412 EMBL:AAFI02000197
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996
PANTHER:PTHR21569 RefSeq:XP_629412.1 ProteinModelPortal:Q54CK4
STRING:Q54CK4 EnsemblProtists:DDB0191671 GeneID:8628931
KEGG:ddi:DDB_G0292882 InParanoid:Q54CK4 OMA:SSGYSKR Uniprot:Q54CK4
Length = 339
Score = 218 (81.8 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 50/121 (41%), Positives = 71/121 (58%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK +RA V++ QPG G I IN + DYFP + R ++ PL+ T+ L K D+ G
Sbjct: 221 RKRSRAVVSI-QPGNGSILINGRTLLDYFPSISYRDNVVQPLVITETLTKWDVSIRAFGG 279
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G GQ+ A R + + L N+ + R +++AGLL D R+ ERKKPG +ARK+F K
Sbjct: 280 GLKGQSEAARRALGFSLVNY-DLGYRPALKIAGLLKNDIRKVERKKPGLLKARKRFPLVK 338
Query: 539 R 539
R
Sbjct: 339 R 339
>TIGR_CMR|NSE_0839 [details] [associations]
symbol:NSE_0839 "ribosomal protein S9" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0103 HOGENOM:HOG000019802
KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_506707.1
ProteinModelPortal:Q2GCT9 SMR:Q2GCT9 STRING:Q2GCT9 GeneID:3931863
KEGG:nse:NSE_0839 PATRIC:22681673
BioCyc:NSEN222891:GHFU-844-MONOMER Uniprot:Q2GCT9
Length = 145
Score = 197 (74.4 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 52/122 (42%), Positives = 69/122 (56%)
Query: 419 RKCARADVTVYQPGTGKITINE-KHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVRE 477
RK + A V V + GTG IN + Y + Q + PL D+ K D+ A+V+
Sbjct: 26 RKTSVARVWV-KAGTGSFRINGGSNLASYLRHQYLCQDVCLPLRVCDVAGKFDVFATVKG 84
Query: 478 GGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWK 537
GG SGQAGA+R G+S L+NF P R ++ GLL RD R ERKK G+ +ARK F +
Sbjct: 85 GGISGQAGALRLGLSRALQNF-NPCFRGALKEEGLLVRDSRIVERKKYGRKKARKSFQFS 143
Query: 538 KR 539
KR
Sbjct: 144 KR 145
>TIGR_CMR|ECH_1018 [details] [associations]
symbol:ECH_1018 "ribosomal protein S9" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_507804.1 ProteinModelPortal:Q2GFH9 STRING:Q2GFH9
GeneID:3927788 KEGG:ech:ECH_1018 PATRIC:20577406
BioCyc:ECHA205920:GJNR-1021-MONOMER Uniprot:Q2GFH9
Length = 152
Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 48/118 (40%), Positives = 66/118 (55%)
Query: 422 ARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHS 481
AR +TV G G +T+N F+YF +++ P I T ++VA+V GG S
Sbjct: 39 ARVWLTV---GKGNVTVNGLDIFNYFKKNTLCRKVYNPFIVTSTSGCYNVVATVSGGGIS 95
Query: 482 GQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
GQAGA+ GIS L++ + P + +R G LTRD R ERKK GQ +ARK + KR
Sbjct: 96 GQAGAVAHGISKALKD-INPSLHPILRSGGFLTRDSRVVERKKYGQHKARKSCQFSKR 152
>CGD|CAL0003535 [details] [associations]
symbol:MRPS9 species:5476 "Candida albicans" [GO:0009060
"aerobic respiration" evidence=IGI] [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 CGD:CAL0003535 GO:GO:0006412 GO:GO:0003735
GO:GO:0009060 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 EMBL:AACQ01000070
EMBL:AACQ01000071 eggNOG:COG0103 PANTHER:PTHR21569 EMBL:AF067962
RefSeq:XP_716299.1 RefSeq:XP_716361.1 ProteinModelPortal:O94150
STRING:O94150 GeneID:3641957 GeneID:3642064 KEGG:cal:CaO19.12695
KEGG:cal:CaO19.5230 Uniprot:O94150
Length = 336
Score = 206 (77.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 56/188 (29%), Positives = 97/188 (51%)
Query: 355 ITKPEYQQFVAVMTRL--VNHKYAYLH-EEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKF 411
+ K Y++ + ++ RL ++ + L E + +Y V K + E+ D
Sbjct: 155 VKKIHYRELITLLNRLRTIDLELMPLEVSEILSEYTSKSVSKIVQLSREKTL---DCFGR 211
Query: 412 VTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDI 471
T+ RK + A + + + G G++ +N K ++FP+ R+ L++P + K ++
Sbjct: 212 AKTQ-AKRKSSIAKIYLVK-GEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNV 269
Query: 472 VASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARAR 531
A V GG++GQ+ AI + I+ L F P ++ R+ AGL+ D R ERKKPG+ +AR
Sbjct: 270 FAQVTGGGYTGQSEAIMYAIAKALVVF-NPLLKPRLSKAGLMKSDTRIVERKKPGKVKAR 328
Query: 532 KKFTWKKR 539
K TW KR
Sbjct: 329 KSPTWVKR 336
>UNIPROTKB|O94150 [details] [associations]
symbol:MRPS9 "37S ribosomal protein S9, mitochondrial"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=IGI]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
CGD:CAL0003535 GO:GO:0006412 GO:GO:0003735 GO:GO:0009060
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0005763 EMBL:AACQ01000070 EMBL:AACQ01000071
eggNOG:COG0103 PANTHER:PTHR21569 EMBL:AF067962 RefSeq:XP_716299.1
RefSeq:XP_716361.1 ProteinModelPortal:O94150 STRING:O94150
GeneID:3641957 GeneID:3642064 KEGG:cal:CaO19.12695
KEGG:cal:CaO19.5230 Uniprot:O94150
Length = 336
Score = 206 (77.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 56/188 (29%), Positives = 97/188 (51%)
Query: 355 ITKPEYQQFVAVMTRL--VNHKYAYLH-EEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKF 411
+ K Y++ + ++ RL ++ + L E + +Y V K + E+ D
Sbjct: 155 VKKIHYRELITLLNRLRTIDLELMPLEVSEILSEYTSKSVSKIVQLSREKTL---DCFGR 211
Query: 412 VTTKDCPRKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDI 471
T+ RK + A + + + G G++ +N K ++FP+ R+ L++P + K ++
Sbjct: 212 AKTQ-AKRKSSIAKIYLVK-GEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNV 269
Query: 472 VASVREGGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARAR 531
A V GG++GQ+ AI + I+ L F P ++ R+ AGL+ D R ERKKPG+ +AR
Sbjct: 270 FAQVTGGGYTGQSEAIMYAIAKALVVF-NPLLKPRLSKAGLMKSDTRIVERKKPGKVKAR 328
Query: 532 KKFTWKKR 539
K TW KR
Sbjct: 329 KSPTWVKR 336
>TIGR_CMR|DET_0506 [details] [associations]
symbol:DET_0506 "ribosomal protein S9" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_181250.1 ProteinModelPortal:Q3Z949 STRING:Q3Z949
GeneID:3230209 KEGG:det:DET0506 PATRIC:21608081
BioCyc:DETH243164:GJNF-506-MONOMER Uniprot:Q3Z949
Length = 132
Score = 188 (71.2 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 49/121 (40%), Positives = 68/121 (56%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + G G I I+ K + F +R ++ P++ TD + K + V V G
Sbjct: 14 RKTAVATVKLTS-GNGVIVIDGKPIEERFTRVQERNVILNPMMVTDTMGKYNAVIKVLGG 72
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G +GQ+GAI GI+ L + ++R ++ GLLTRD R KERKKPG RARK + K
Sbjct: 73 GVAGQSGAIAHGIARALEKS-DDKLRATLKSNGLLTRDDRTKERKKPGLKRARKAPQYTK 131
Query: 539 R 539
R
Sbjct: 132 R 132
>TIGR_CMR|APH_1107 [details] [associations]
symbol:APH_1107 "ribosomal protein S9" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_505655.1 ProteinModelPortal:Q2GIZ6 STRING:Q2GIZ6
GeneID:3930317 KEGG:aph:APH_1107 PATRIC:20950972
BioCyc:APHA212042:GHPM-1113-MONOMER Uniprot:Q2GIZ6
Length = 149
Score = 184 (69.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 50/121 (41%), Positives = 69/121 (57%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK A A V + + G+G +T+N YF E +++ P + D+ A V G
Sbjct: 31 RKNAVAKVWL-KVGSGVVTVNGMECAAYFGREALCKRVFNPFHVASSVGCYDVRAVVFGG 89
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G SGQAGA+ GIS L++ + P ++ +R AGLLTRD R ERKK GQ +ARKK + K
Sbjct: 90 GKSGQAGAVAHGISKALKD-INPSLQPVLRQAGLLTRDSRVVERKKYGQHKARKKCQFSK 148
Query: 539 R 539
R
Sbjct: 149 R 149
>TIGR_CMR|CBU_1748 [details] [associations]
symbol:CBU_1748 "ribosomal protein S9" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:NP_820728.1
ProteinModelPortal:Q83AX9 SMR:Q83AX9 GeneID:1209659
KEGG:cbu:CBU_1748 PATRIC:17932237
BioCyc:CBUR227377:GJ7S-1722-MONOMER Uniprot:Q83AX9
Length = 139
Score = 183 (69.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 51/126 (40%), Positives = 70/126 (55%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V + + GTG+I IN +YF E R + PL+ D+ ++ D+ A+V+ G
Sbjct: 15 RKTSSARVFL-RSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQSRFDVYATVQGG 73
Query: 479 GHSGQAGAIRWGISWGLRNFVEP-----EMRERMRLAGLLTRDFRRKERKKPGQARARKK 533
G SGQAGAIR GI+ L + E R +R AG +TRD R ERKK G AR+
Sbjct: 74 GDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRG 133
Query: 534 FTWKKR 539
+ KR
Sbjct: 134 TQFSKR 139
>ASPGD|ASPL0000002338 [details] [associations]
symbol:AN6564 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:BN001301 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
HOGENOM:HOG000019802 PANTHER:PTHR21569 OMA:TFYSANP
EnsemblFungi:CADANIAT00007338 Uniprot:C8V0U7
Length = 320
Score = 196 (74.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 46/121 (38%), Positives = 73/121 (60%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREG 478
RK + A V++ + G G++ +N K + FP +DR+ + L ++ L+K ++ A+V+ G
Sbjct: 202 RKESSAVVSLVE-GDGEVRVNGKTLVEAFPRVHDRESATWALRCSNRLDKYNVWATVKGG 260
Query: 479 GHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKK 538
G +GQA A+ + L EP ++ +R AG++T D RR ERKKPG +ARK TW K
Sbjct: 261 GTTGQAEALALALGRALM-IHEPALKPILRRAGVITVDARRVERKKPGHVKARKSPTWVK 319
Query: 539 R 539
R
Sbjct: 320 R 320
>TAIR|locus:2037222 [details] [associations]
symbol:RPS9 "ribosomal protein S9" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0000312 "plastid small ribosomal subunit"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0016020 GO:GO:0006412
GO:GO:0009941 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC008263
GO:GO:0000312 EMBL:AB022676 EMBL:AF344318 EMBL:AY045856
EMBL:AY045600 EMBL:AY091382 EMBL:AY086419 IPI:IPI00516738
PIR:T52450 RefSeq:NP_177635.1 UniGene:At.384 UniGene:At.74895
ProteinModelPortal:Q9XJ27 SMR:Q9XJ27 STRING:Q9XJ27 PaxDb:Q9XJ27
PRIDE:Q9XJ27 EnsemblPlants:AT1G74970.1 GeneID:843836
KEGG:ath:AT1G74970 GeneFarm:38 TAIR:At1g74970 eggNOG:COG0103
HOGENOM:HOG000019802 InParanoid:Q9XJ27 KO:K02996 OMA:RDTRIVE
PhylomeDB:Q9XJ27 ProtClustDB:CLSN2682465 Genevestigator:Q9XJ27
GermOnline:AT1G74970 InterPro:IPR023035 PANTHER:PTHR21569
Uniprot:Q9XJ27
Length = 208
Score = 172 (65.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 50/122 (40%), Positives = 62/122 (50%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPDEND-RQQLMFPLIFTDMLNKVDIVASVRE 477
RKCA A V V Q GTGK+ IN + +Y Q + PL+ N DI
Sbjct: 89 RKCAIARV-VLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHG 147
Query: 478 GGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWK 537
GG SGQA AI G++ L V + R ++ GLLTRD R ERKK G +ARK +
Sbjct: 148 GGLSGQAQAITLGVARALLK-VSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFS 206
Query: 538 KR 539
KR
Sbjct: 207 KR 208
>TIGR_CMR|CJE_1652 [details] [associations]
symbol:CJE_1652 "ribosomal protein S9" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_179633.1
ProteinModelPortal:Q5HSV2 STRING:Q5HSV2 PRIDE:Q5HSV2 GeneID:3232280
KEGG:cjr:CJE1652 PATRIC:20045099
BioCyc:CJEJ195099:GJC0-1682-MONOMER Uniprot:Q5HSV2
Length = 129
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/122 (38%), Positives = 70/122 (57%)
Query: 419 RKCARADVTVYQPGTGKITINEKHYFDYFPD-ENDRQQLMFPLIFTDMLNKVDIVASVRE 477
RK A A V V +PG+GKI++N + E + +++ PL+ T +DI A+
Sbjct: 10 RKTAIAKVWV-KPGSGKISVNGVDLNTWLGGHEAIKLKVVQPLLVTKQETSMDIKATTLG 68
Query: 478 GGHSGQAGAIRWGISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWK 537
GG+S QA A+R GIS L ++ + R ++ GLLTRD R ERKK G+ +AR+ +
Sbjct: 69 GGYSAQAEALRHGISRALAA-MDADFRALLKPKGLLTRDSRTVERKKYGRRKARRSPQFS 127
Query: 538 KR 539
KR
Sbjct: 128 KR 129
>UNIPROTKB|I3LK28 [details] [associations]
symbol:I3LK28 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR21569
GeneTree:ENSGT00390000011204 EMBL:FP565749
Ensembl:ENSSSCT00000032215 Uniprot:I3LK28
Length = 114
Score = 124 (48.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 67 RAEDYT-NFMEGEKHSFEVGRRHLANMMGRDVETFTQKDID 106
R E YT +F++ + F +G+RHLANMMG D ETFTQ+DID
Sbjct: 65 RRETYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDID 105
Score = 120 (47.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 205 RAEDYT-SFMEGEKHSYEVGRRHLANMMGRDVETFTQKDID 244
R E YT F++ + + +G+RHLANMMG D ETFTQ+DID
Sbjct: 65 RRETYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDID 105
>GENEDB_PFALCIPARUM|PF11_0382 [details] [associations]
symbol:PF11_0382 "ribosomal protein S9,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 GO:GO:0015935
PANTHER:PTHR21569 RefSeq:XP_001348052.1 ProteinModelPortal:Q8IHZ4
EnsemblProtists:PF11_0382:mRNA GeneID:810928 KEGG:pfa:PF11_0382
EuPathDB:PlasmoDB:PF3D7_1137100 HOGENOM:HOG000282467 OMA:ISECENN
ProtClustDB:CLSZ2432842 Uniprot:Q8IHZ4
Length = 300
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQP 431
N+ + +++ I + + +V KT D E +G+ T K R CA + +
Sbjct: 142 NYNDSIINKILIDNFNKKRV-KTFWHDNNEWLEESEGIG--TNK---RSCAYVYI---KR 192
Query: 432 GTGKITINEKH-YFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
G+G I IN+K + +P +R ++ P T+ D+ ++ GG SGQ+ A R
Sbjct: 193 GSGIIKINDKEDLYIRWPYFYNRMDVLEPFYITNTACVFDVFIKLKGGGISGQSKAARLA 252
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ L N P + ++ +L D R+K K PG+ ++R W KR
Sbjct: 253 VGRALLNAC-PHIYNELKQHDILYEDMRQKFPKMPGRKKSRAMKQWSKR 300
>UNIPROTKB|Q8IHZ4 [details] [associations]
symbol:PF11_0382 "Mitochondrial ribosomal protein S9,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0015935
"small ribosomal subunit" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 GO:GO:0015935
PANTHER:PTHR21569 RefSeq:XP_001348052.1 ProteinModelPortal:Q8IHZ4
EnsemblProtists:PF11_0382:mRNA GeneID:810928 KEGG:pfa:PF11_0382
EuPathDB:PlasmoDB:PF3D7_1137100 HOGENOM:HOG000282467 OMA:ISECENN
ProtClustDB:CLSZ2432842 Uniprot:Q8IHZ4
Length = 300
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 372 NHKYAYLHEEFIFKYRQPKVIKTMNFDPEEPQAGEDGVKFVTTKDCPRKCARADVTVYQP 431
N+ + +++ I + + +V KT D E +G+ T K R CA + +
Sbjct: 142 NYNDSIINKILIDNFNKKRV-KTFWHDNNEWLEESEGIG--TNK---RSCAYVYI---KR 192
Query: 432 GTGKITINEKH-YFDYFPDENDRQQLMFPLIFTDMLNKVDIVASVREGGHSGQAGAIRWG 490
G+G I IN+K + +P +R ++ P T+ D+ ++ GG SGQ+ A R
Sbjct: 193 GSGIIKINDKEDLYIRWPYFYNRMDVLEPFYITNTACVFDVFIKLKGGGISGQSKAARLA 252
Query: 491 ISWGLRNFVEPEMRERMRLAGLLTRDFRRKERKKPGQARARKKFTWKKR 539
+ L N P + ++ +L D R+K K PG+ ++R W KR
Sbjct: 253 VGRALLNAC-PHIYNELKQHDILYEDMRQKFPKMPGRKKSRAMKQWSKR 300
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 539 539 0.00094 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 611 (65 KB)
Total size of DFA: 311 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.39u 0.13s 53.52t Elapsed: 00:00:06
Total cpu time: 53.40u 0.13s 53.53t Elapsed: 00:00:06
Start: Thu Aug 15 15:35:15 2013 End: Thu Aug 15 15:35:21 2013