RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6190
         (87 letters)



>d2gz4a1 a.211.1.1 (A:6-205) Hypothetical protein Atu1052
          {Agrobacterium tumefaciens [TaxId: 358]}
          Length = 200

 Score = 22.9 bits (49), Expect = 5.8
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 41 ISDAHVCWTCDVDRPYKYVI 60
          + DA      D+  P+K V+
Sbjct: 79 LHDAPEYVIGDMISPFKSVV 98


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.127    0.385 

Gapped
Lambda     K      H
   0.267   0.0596    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 300,284
Number of extensions: 10492
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 4
Length of query: 87
Length of database: 2,407,596
Length adjustment: 52
Effective length of query: 35
Effective length of database: 1,693,636
Effective search space: 59277260
Effective search space used: 59277260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.2 bits)