BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6191
(305 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/251 (49%), Positives = 160/251 (63%), Gaps = 18/251 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 68 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 124
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K TLCG
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCG 183
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 243
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPSFN 226
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL PRF S +
Sbjct: 244 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD 303
Query: 227 SPRRKPLMERN 237
RKPL N
Sbjct: 304 PSNRKPLTVLN 314
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 104 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 162
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 163 GDFGLATKVEYDGERKK 179
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/251 (49%), Positives = 160/251 (63%), Gaps = 18/251 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 120
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K TLCG
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCG 179
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPSFN 226
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL PRF S +
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD 299
Query: 227 SPRRKPLMERN 237
RKPL N
Sbjct: 300 PSNRKPLTVLN 310
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 100 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 158
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 159 GDFGLATKVEYDGERKK 175
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 159/251 (63%), Gaps = 18/251 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 86 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 142
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K LCG
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCG 201
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 261
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPSFN 226
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL PRF S +
Sbjct: 262 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD 321
Query: 227 SPRRKPLMERN 237
RKPL N
Sbjct: 322 PSNRKPLTVLN 332
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 122 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 180
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 181 GDFGLATKVEYDGERKK 197
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 159/251 (63%), Gaps = 18/251 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 144
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K LCG
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCG 203
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 263
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPSFN 226
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL PRF S +
Sbjct: 264 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD 323
Query: 227 SPRRKPLMERN 237
RKPL N
Sbjct: 324 PSNRKPLTVLN 334
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 124 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 182
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 183 GDFGLATKVEYDGERKK 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 159/251 (63%), Gaps = 18/251 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 120
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K TLCG
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCG 179
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPSFN 226
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL P F S +
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPXFSIAPSSLD 299
Query: 227 SPRRKPLMERN 237
RKPL N
Sbjct: 300 PSNRKPLTVLN 310
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 100 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 158
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 159 GDFGLATKVEYDGERKK 175
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 220 bits (560), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 156/238 (65%), Gaps = 19/238 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
MS EI+IHRSL H++VVGFH FFED+ FV+++LELCR+RS++EL+ + +++P A+
Sbjct: 62 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR---KALTEPEAR 118
Query: 61 ----PVIWVSKW-----VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
++ ++ V + D LN+D V D + K LCG
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCG 177
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L+K GHSFEVDVWSIGCIMYTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 237
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRFDSVVPS 224
+ AA++I+KML DP RP + +LL+ EFF + Y P LP +CL PRF S+ PS
Sbjct: 238 INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF-SIAPS 294
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R+Y++QI+ G YLH +++IHRDLKLGNLFL+++ VKI
Sbjct: 98 RRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI 156
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA ++E+DG+RK+
Sbjct: 157 GDFGLATKVEYDGERKK 173
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 213 bits (543), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 149/232 (64%), Gaps = 18/232 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
MS EIAIH+SL + +VVGFH FFED FVY++LE+CR+RS++EL+ + +++P A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEAR 145
Query: 60 -------QPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
Q V ++ + V + D LNDD V D + K TLCG
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKTLCG 204
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L K GHSFEVD+WS+GCI+YTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRF 218
+ A+ +I++ML DP RP VA+LL EFF + Y P LP SCL PRF
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R++M+Q ++GV YLH++++IHRDLKLGNLFL+D+ VKI
Sbjct: 125 RRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKI 183
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA +IEFDG+RK+
Sbjct: 184 GDFGLATKIEFDGERKK 200
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 148/232 (63%), Gaps = 18/232 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
MS EIAIH+SL + +VVGFH FFED FVY++LE+CR+RS++EL+ + +++P A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEAR 145
Query: 60 -------QPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
Q V ++ + V + D LNDD V D + K LCG
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKXLCG 204
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L K GHSFEVD+WS+GCI+YTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRF 218
+ A+ +I++ML DP RP VA+LL EFF + Y P LP SCL PRF
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R++M+Q ++GV YLH++++IHRDLKLGNLFL+D+ VKI
Sbjct: 125 RRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKI 183
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA +IEFDG+RK+
Sbjct: 184 GDFGLATKIEFDGERKK 200
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 148/232 (63%), Gaps = 18/232 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
MS EIAIH+SL + +VVGFH FFED FVY++LE+CR+RS++EL+ + +++P A
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEAR 129
Query: 60 -------QPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
Q V ++ + V + D LNDD V D + K LCG
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLCG 188
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L K GHSFEVD+WS+GCI+YTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRF 218
+ A+ +I++ML DP RP VA+LL EFF + Y P LP SCL PRF
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 300
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R++M+Q ++GV YLH++++IHRDLKLGNLFL+D+ VKI
Sbjct: 109 RRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKI 167
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA +IEFDG+RK+
Sbjct: 168 GDFGLATKIEFDGERKK 184
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 148/232 (63%), Gaps = 18/232 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
MS EIAIH+SL + +VVGFH FFED FVY++LE+CR+RS++EL+ + +++P A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR---KAVTEPEAR 145
Query: 60 -------QPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG 107
Q V ++ + V + D LNDD V D + K LCG
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLCG 204
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPAT 167
TPNYIAPE+L K GHSFEVD+WS+GCI+YTLLVGKPPFETS LKETY RIKK EY +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF-NDYCPTSLPASCLMTAPRF 218
+ A+ +I++ML DP RP VA+LL EFF + Y P LP SCL PRF
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKI 288
RR+ L+E + KRRKA+TEPE R++M+Q ++GV YLH++++IHRDLKLGNLFL+D+ VKI
Sbjct: 125 RRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKI 183
Query: 289 GDFGLAARIEFDGQRKR 305
GDFGLA +IEFDG+RK+
Sbjct: 184 GDFGLATKIEFDGERKK 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 34/222 (15%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ E+ IH LKH +++ +++FEDS +VY++LE+C M + ++ S+ A+
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEAR 115
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN----------------- 103
+ + G Y S G++ DLT +L +N
Sbjct: 116 HFM-------HQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165
Query: 104 -----TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK 158
TLCGTPNYI+PEI ++ H E DVWS+GC+ YTLL+G+PPF+T T+K T +++
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+Y++P+ L A +I ++L +P R ++ +L F +
Sbjct: 226 LADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 234 MERNSKRR-KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
M R K R K +E E R +M QI+ G+ YLH H I+HRDL L NL L+ N +KI DFG
Sbjct: 98 MNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG 157
Query: 293 LAARIEF 299
LA +++
Sbjct: 158 LATQLKM 164
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEE------M 54
+ +EI I L H N++ +++F D + +Y+ILE + + + +C +E M
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 55 SDPAAQPVIWVSKWVDYSD--------KYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
+ A + K V + D ++ D V L R T+C
Sbjct: 130 EELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR-------KTMC 182
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GT +Y+ PE++ H+ +VD+W IG + Y LLVG PPFE+++ ETY RI KV+ K PA
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA 242
Query: 167 TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTA 215
++ A +I K+L +P +R P+AQ+ + LP S L +
Sbjct: 243 SVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQSV 291
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
E T M+++ + + Y H K+IHRD+K NL L +KI DFG
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + ++TLCGT
Sbjct: 116 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRDTLCGTL 171
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 120 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE + H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 236 EGARDLISRLLKHNPSQRPXLREVLEHPWIT--ANSSKPSNC 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANKNTLCGTPN 110
E+++ + SK V + D L + N + + + TLCGT +
Sbjct: 117 TELANALS---YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLD 173
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKK 170
Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P + +
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 171 PAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
A +I ++L +P QRP + ++L + +S P++C
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 272
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI +FG +
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 132 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 187
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 247
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 248 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 270
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 120 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 120 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 141 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 196
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 256
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + ++ LCGT
Sbjct: 141 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRDDLCGTL 196
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 256
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANKNTLCGTPN 110
E+++ + SK V + D L + N + + + TLCGT +
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLD 174
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKK 170
Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P + +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 171 PAATMIKKMLLLDPVQRPPVAQLL 194
A +I ++L +P QRP + ++L
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVL 258
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI +FG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 54 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 114 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 169
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 229
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 230 EGARDLISRLLKHNPSQRPMLREVL 254
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 96 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 52 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 112 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 167
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 227
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 228 EGARDLISRLLKHNPSQRPMLREVL 252
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG
Sbjct: 94 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVL 258
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 119 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 234
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 235 EGARDLISRLLKHNPSQRPMLREVL 259
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG
Sbjct: 101 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTELCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 270
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 116 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTDLCGTL 171
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTDLCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 270
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 120 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTDLCGTL 175
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 117 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRXXLCGTL 172
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 232
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 272
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 99 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRAALCGTL 173
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTDLCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 270
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + ++ LCGT
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRDDLCGTL 173
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVL 258
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTXLCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVL 255
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVL 255
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRXXLCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVL 255
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 118 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRXXLCGTL 173
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVL 258
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R ++ E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F DS VY+ILE +K S + +A +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + LCGT
Sbjct: 115 TELANALS---YCHSKKVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T ++TY RI +VE+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVT 230
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L +P QRP + ++L
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVL 255
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
R ++ E T Y+ ++ +SY H K+IHRD+K NL L +KI DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + L GT
Sbjct: 120 TELANALS---YCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRXXLXGTL 175
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
+ A +I ++L +P QRP + ++L + +S P++C
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWIT--ANSSKPSNC 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 52 EEMSDPAAQPVIWVSKWVDYSD------KYGFGYQLNDDSSGVMFNDLTRMIMLANKNTL 105
E+++ + SK V + D G +L G + + + + TL
Sbjct: 116 TELANALS---YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS-----SRRTTL 167
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT +Y+ PE++ H +VD+WS+G + Y LVGKPPFE +T +ETY RI +VE+ P
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
+ + A +I ++L +P QRP + ++L
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
E T Y+ ++ +SY H ++IHRD+K NL L +KI DFG +
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + ++TLCGT
Sbjct: 119 TELANALS---YCHSKRVIHRDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRDTLCGTL 174
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVG PPFE T +ETY RI +VE+ P +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L + QR +A++L
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVL 259
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
E T Y+ ++ +SY H ++IHRD+K NL L N +KI DFG +
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +E+ I L+H N++ + +F D+ VY+ILE +K S + +A +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML--ANKNTLCGTP 109
E+++ + SK V + D L + + D + + + TLCGT
Sbjct: 119 TELANALS---YCHSKRVIHRDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRTTLCGTL 174
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+Y+ PE++ H +VD+WS+G + Y LVG PPFE T +ETY RI +VE+ P +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 170 KPAATMIKKMLLLDPVQRPPVAQLL 194
+ A +I ++L + QR +A++L
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVL 259
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
E T Y+ ++ +SY H ++IHRD+K NL L N +KI DFG +
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EIA+ R +KH N+V +E +Y++++L S EL++ + ++ A
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLV---SGGELFDRIVEKGFYTEKDAS 123
Query: 61 PVI-WVSKWVDYSDKYGFG----------YQLNDDSSGVMFNDLTRMIMLANKN---TLC 106
+I V V Y + G Y D+ S +M +D M + T C
Sbjct: 124 TLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC 183
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GTP Y+APE+L + +S VD WSIG I Y LL G PPF + + +I K EY+ +
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQ 192
+ A I+ ++ DP +R Q
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQ 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL---SDNFVVKIGDFGLA 294
TE + ++Q+L+ V YLH I+HRDLK NL + + I DFGL+
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +EI I L+H N++ +++F D K +Y++LE +K + SA +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 52 EEMSDP----AAQPVIWVS-KWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
EE++D + VI K + Y ++ D V L R M C
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM-------C 173
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GT +Y+ PE++ H +VD+W G + Y LVG PPF++ + ET+ RI V+ K P
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
Query: 167 TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L + +I K+L P QR P+ ++
Sbjct: 234 FLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
E + +M+++ + + Y H+ K+IHRD+K NL + +KI DFG +
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +EI I L+H N++ +++F D K +Y++LE +K + SA +
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 52 EEMSDP----AAQPVIWVS-KWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
EE++D + VI K + Y ++ D V L R M C
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM-------C 174
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GT +Y+ PE++ H +VD+W G + Y LVG PPF++ + ET+ RI V+ K P
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 234
Query: 167 TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L + +I K+L P QR P+ ++
Sbjct: 235 FLSDGSKDLISKLLRYHPPQRLPLKGVM 262
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
E + +M+++ + + Y H+ K+IHRD+K NL + +KI DFG +
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---------RKRSMMELYNSACDL 51
+ +EI I L+H N++ +++F D K +Y++LE +K + SA +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 52 EEMSDP----AAQPVIWVS-KWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
EE++D + VI K + Y ++ D V L R M C
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM-------C 173
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GT +Y+ PE++ H +VD+W G + Y LVG PPF++ + ET+ RI V+ K P
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
Query: 167 TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L + +I K+L P QR P+ ++
Sbjct: 234 FLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
E + +M+++ + + Y H+ K+IHRD+K NL + +KI DFG +
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK +T CG+P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAP-------------LPDYKD 288
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 289 PRRTELMVSMGYTREEIQD 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EIA+ + +KH N+V +E + Y++++L S EL++ + ++ A
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV---SGGELFDRILERGVYTEKDAS 109
Query: 61 PVIW-VSKWVDYSDKYGFG----------YQLNDDSSGVMFND--LTRMIMLANKNTLCG 107
VI V V Y + G Y +++S +M D L++M +T CG
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACG 169
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA- 166
TP Y+APE+L + +S VD WSIG I Y LL G PPF T + + +IK+ Y+ +
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP 229
Query: 167 ---TLKKPAATMIKKMLLLDPVQR 187
+ + A I +L DP +R
Sbjct: 230 FWDDISESAKDFICHLLEKDPNER 253
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL---SDNFVVKIGDFGLAAR 296
R TE + ++Q+L V YLH++ I+HRDLK NL +N + I DFGL ++
Sbjct: 99 ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL-SK 157
Query: 297 IEFDG 301
+E +G
Sbjct: 158 MEQNG 162
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK +T CG+P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP-------------LPDYKD 288
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 289 PRRTELMVSMGYTREEIQD 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK +T CG+P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP-------------LPDYKD 288
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 289 PRRTELMVSMGYTREEIQD 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ 114
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK +T CG+P Y AP
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 174
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 234
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 235 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP-------------LPDYKD 281
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 282 PRRTELMVSMGYTREEIQD 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 103 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 158
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
M EIA+ +KH N+V +E +Y+I++L S EL++ + ++ A
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV---SGGELFDRIVEKGFYTERDAS 119
Query: 61 PVIW-VSKWVDYSDKYG-----------FGYQLNDDSSGVMFND--LTRMIMLANK-NTL 105
+I+ V V Y G Y L++DS +M +D L++M + +T
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTA 178
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
CGTP Y+APE+L + +S VD WSIG I Y LL G PPF + + +I K EY+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ + A I+ ++ DP +R Q L
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLF---LSDNFVVKIGDFGLA 294
TE + + Q+L+ V YLHD I+HRDLK NL L ++ + I DFGL+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
M EIA+ +KH N+V +E +Y+I++L S EL++ + ++ A
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV---SGGELFDRIVEKGFYTERDAS 119
Query: 61 PVIW-VSKWVDYSDKYG-----------FGYQLNDDSSGVMFND--LTRMIMLANK-NTL 105
+I+ V V Y G Y L++DS +M +D L++M + +T
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTA 178
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
CGTP Y+APE+L + +S VD WSIG I Y LL G PPF + + +I K EY+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ + A I+ ++ DP +R Q L
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLF---LSDNFVVKIGDFGLA 294
TE + + Q+L+ V YLHD I+HRDLK NL L ++ + I DFGL+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
M EIA+ +KH N+V +E +Y+I++L S EL++ + ++ A
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV---SGGELFDRIVEKGFYTERDAS 119
Query: 61 PVIW-VSKWVDYSDKYG-----------FGYQLNDDSSGVMFND--LTRMIMLANK-NTL 105
+I+ V V Y G Y L++DS +M +D L++M + +T
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTA 178
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
CGTP Y+APE+L + +S VD WSIG I Y LL G PPF + + +I K EY+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ + A I+ ++ DP +R Q L
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLF---LSDNFVVKIGDFGLA 294
TE + + Q+L+ V YLHD I+HRDLK NL L ++ + I DFGL+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
M EIA+ +KH N+V +E +Y+I++L S EL++ + ++ A
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV---SGGELFDRIVEKGFYTERDAS 119
Query: 61 PVIW-VSKWVDYSDKYG-----------FGYQLNDDSSGVMFND--LTRMIMLANK-NTL 105
+I+ V V Y G Y L++DS +M +D L++M + +T
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTA 178
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
CGTP Y+APE+L + +S VD WSIG I Y LL G PPF + + +I K EY+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ + A I+ ++ DP +R Q L
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLF---LSDNFVVKIGDFGLA 294
TE + + Q+L+ V YLHD I+HRDLK NL L ++ + I DFGL+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMS-DPAA 59
+ +E+ I R ++H N++ H FE+ V +ILEL S EL++ + E ++ D A
Sbjct: 55 IEREVNILREIRHPNIITLHDIFENKTDVVLILELV---SGGELFDFLAEKESLTEDEAT 111
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT--------------- 104
Q + + V Y + F+ IML +KN
Sbjct: 112 QFLKQILDGVHYLHSKRIAH----------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 105 ---------LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 221
Query: 156 RIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + + A I+++L+ DP +R +AQ L
Sbjct: 222 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL+GV YLH +I H DLK N+ L D V +K+ DFG+A +
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 297 IE 298
IE
Sbjct: 162 IE 163
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMS-DPAA 59
+ +E+ I R ++H N++ H FE+ V +ILEL S EL++ + E ++ D A
Sbjct: 76 IEREVNILREIRHPNIITLHDIFENKTDVVLILELV---SGGELFDFLAEKESLTEDEAT 132
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT--------------- 104
Q + + V Y + F+ IML +KN
Sbjct: 133 QFLKQILDGVHYLHSKRIAH----------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 105 ---------LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 183 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 242
Query: 156 RIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + + A I+++L+ DP +R +AQ L
Sbjct: 243 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL+GV YLH +I H DLK N+ L D V +K+ DFG+A +
Sbjct: 123 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 297 IE 298
IE
Sbjct: 183 IE 184
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK + CG+P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP-------------LPDYKD 288
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 289 PRRTELMVSMGYTREEIQD 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 28/259 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK + CG P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN------DYCPTSLPASCLMTAPRFDSVVPSFNS 227
++KK L+L+P +R + Q++ + N + P P +P +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP-------------LPDYKD 288
Query: 228 PRRKPLMERNSKRRKAITE 246
PRR LM R+ I +
Sbjct: 289 PRRTELMVSMGYTREEIQD 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMS-DPAA 59
+ +E+ I R ++H N++ H FE+ V +ILEL S EL++ + E ++ D A
Sbjct: 62 IEREVNILREIRHPNIITLHDIFENKTDVVLILELV---SGGELFDFLAEKESLTEDEAT 118
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT--------------- 104
Q + + V Y + F+ IML +KN
Sbjct: 119 QFLKQILDGVHYLHSKRIAH----------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 105 ---------LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 228
Query: 156 RIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + + A I+++L+ DP +R +AQ L
Sbjct: 229 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL+GV YLH +I H DLK N+ L D V +K+ DFG+A +
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 297 IE 298
IE
Sbjct: 169 IE 170
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKN---TLCGTPNYIAPEILNKNGHSF-EVDVWSIGCIMY 136
L DD+ V D ++ + N T CG+PNY APE++N ++ EVDVWS G ++Y
Sbjct: 140 LLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY 199
Query: 137 TLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
+LVG+ PF+ + + ++ Y +P L A ++I++M++ DP+QR + ++
Sbjct: 200 VMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259
Query: 197 EFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQI 256
+FN P L + DS + S L E I E ++
Sbjct: 260 PWFNVNLPDYLRPMEEVQGSYADSRIVS-------KLGEAMGFSEDYIVEALRSDENNEV 312
Query: 257 LEGVSYLHDHKIIHRDLK 274
E + LH++++I L+
Sbjct: 313 KEAYNLLHENQVIQEKLE 330
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+K +TE E R + +QI+ + Y H HKI+HRDLK NL L DN VKI DFGL+
Sbjct: 102 KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E+ I + L H N+V E K +Y+I+E S E+++ M + A+
Sbjct: 60 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA---SGGEVFDYLVAHGRMKEKEARSK 116
Query: 63 I-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDL---TRMIMLANKNTLCGTPNY 111
+ V Y + ++ L D + D + +T CG+P Y
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPY 176
Query: 112 IAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKK 170
APE+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 236
Query: 171 PAATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
++K+ L+L+P++R + Q++ + N
Sbjct: 237 DCENLLKRFLVLNPIKRGTLEQIMKDRWIN 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ E E R +QI+ V Y H +I+HRDLK NL L + +KI DFG + G+
Sbjct: 108 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 166
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI+ R L+H +++ + + + +++E EL++ ++MS+ A+
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEAR 106
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKN---TLCGTP 109
+ V+Y ++ ++ L D+ V D ++ + N T CG+P
Sbjct: 107 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
NY APE+++ ++ EVDVWS G I+Y +L + PF+ ++ + I Y LP L
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 226
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
AA +IK+ML+++P+ R + +++ ++F P L
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 265
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+R ++E E R + +QI+ V Y H HKI+HRDLK NL L ++ VKI DFGL + I
Sbjct: 96 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMT 154
Query: 300 DG 301
DG
Sbjct: 155 DG 156
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI+ R L+H +++ + + + +++E EL++ ++MS+ A+
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEAR 110
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKN---TLCGTP 109
+ V+Y ++ ++ L D+ V D ++ + N T CG+P
Sbjct: 111 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
NY APE+++ ++ EVDVWS G I+Y +L + PF+ ++ + I Y LP L
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 230
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
AA +IK+ML+++P+ R + +++ ++F P L
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+R ++E E R + +QI+ V Y H HKI+HRDLK NL L ++ VKI DFGL + I
Sbjct: 100 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMT 158
Query: 300 DGQ 302
DG
Sbjct: 159 DGN 161
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI+ R L+H +++ + + + +++E EL++ ++MS+ A+
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEAR 116
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKN---TLCGTP 109
+ V+Y ++ ++ L D+ V D ++ + N T CG+P
Sbjct: 117 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
NY APE+++ ++ EVDVWS G I+Y +L + PF+ ++ + I Y LP L
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 236
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
AA +IK+ML+++P+ R + +++ ++F P L
Sbjct: 237 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+R ++E E R + +QI+ V Y H HKI+HRDLK NL L ++ VKI DFGL + I
Sbjct: 106 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMT 164
Query: 300 DGQ 302
DG
Sbjct: 165 DGN 167
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI+ R L+H +++ + + + +++E EL++ ++MS+ A+
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEAR 115
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKN---TLCGTP 109
+ V+Y ++ ++ L D+ V D ++ + N T CG+P
Sbjct: 116 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
NY APE+++ ++ EVDVWS G I+Y +L + PF+ ++ + I Y LP L
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 235
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
AA +IK+ML+++P+ R + +++ ++F P L
Sbjct: 236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+R ++E E R + +QI+ V Y H HKI+HRDLK NL L ++ VKI DFGL + I
Sbjct: 105 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMT 163
Query: 300 DGQ 302
DG
Sbjct: 164 DGN 166
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 26/249 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R LKH N+V H + F Y++ +L + EL+ E S+ A
Sbjct: 50 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV---TGGELFEDIVAREYYSEADAS 106
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT----L 105
I + + V++ G ++ L S G V D I +
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GTP Y++PE+L K+ + VD+W+ G I+Y LLVG PPF Y +IK Y P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
+ T+ A +I KML ++P +R ++ L + C S AS + D
Sbjct: 227 SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI---CQRSTVASMMHRQETVD-C 282
Query: 222 VPSFNSPRR 230
+ FN+ R+
Sbjct: 283 LKKFNARRK 291
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL---SDNFVVKIGDFGLAARI 297
R+ +E + ++QILE V++ H + I+HRDLK NL L S VK+ DFGLA +
Sbjct: 97 REYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156
Query: 298 EFDGQ 302
+ D Q
Sbjct: 157 QGDQQ 161
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 26/249 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R LKH N+V H + F Y++ +L + EL+ E S+ A
Sbjct: 50 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV---TGGELFEDIVAREYYSEADAS 106
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT----L 105
I + + V++ G ++ L S G V D I +
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GTP Y++PE+L K+ + VD+W+ G I+Y LLVG PPF Y +IK Y P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
+ T+ A +I KML ++P +R ++ L + C S AS + D
Sbjct: 227 SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI---CQRSTVASMMHRQETVD-C 282
Query: 222 VPSFNSPRR 230
+ FN+ R+
Sbjct: 283 LKKFNARRK 291
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL---SDNFVVKIGDFGLAARI 297
R+ +E + ++QILE V++ H + I+HRDLK NL L S VK+ DFGLA +
Sbjct: 97 REYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156
Query: 298 EFDGQ 302
+ D Q
Sbjct: 157 QGDQQ 161
>pdb|1Q4K|B Chain B, The Polo-Box Domain Of Plk1 In Complex With A Phospho-
Peptide
pdb|1Q4K|A Chain A, The Polo-Box Domain Of Plk1 In Complex With A Phospho-
Peptide
pdb|1Q4K|C Chain C, The Polo-Box Domain Of Plk1 In Complex With A Phospho-
Peptide
Length = 259
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 54 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 113
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 114 GTESYLT 120
>pdb|2OGQ|A Chain A, Molecular And Structural Basis Of Plk1 Substrate
Recognition: Implications In Centrosomal Localization
pdb|2OJX|A Chain A, Molecular And Structural Basis Of Polo-Like Kinase 1
Substrate Recognition: Implications In Centrosomal
Localization
pdb|3BZI|A Chain A, Molecular And Structural Basis Of Polo-Like Kinase 1
Substrate Recognition: Implications In Centrosomal
Localization
Length = 239
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 34 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 93
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 94 GTESYLT 100
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 25/248 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R L+H N+V H ++ F Y++ +L + EL+ E S+ A
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV---TGGELFEDIVAREFYSEADAS 131
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT---LC 106
I + + + Y G ++ L + G V D I + +
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 191
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GTP Y++PE+L K+ +S VD+W+ G I+Y LLVG PPF Y++IK Y P+
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 251
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVV 222
T+ A ++I ML ++P +R Q L + C AS + D +
Sbjct: 252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI---CNRERVASAIHRQDTVD-CL 307
Query: 223 PSFNSPRR 230
FN+ R+
Sbjct: 308 KKFNARRK 315
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + ++QILE ++Y H + I+HR+LK NL L+ VK+ DFGLA +
Sbjct: 122 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
>pdb|1UMW|A Chain A, Structure Of A Human Plk1 Polo-Box DomainPHOSPHOPEPTIDE
Complex
pdb|1UMW|B Chain B, Structure Of A Human Plk1 Polo-Box DomainPHOSPHOPEPTIDE
Complex
pdb|1Q4O|A Chain A, The Structure Of The Polo Box Domain Of Human Plk1
pdb|1Q4O|B Chain B, The Structure Of The Polo Box Domain Of Human Plk1
pdb|3HIK|A Chain A, Structure Of Human Plk1-Pbd In Complex With Plhspt
pdb|4DFW|A Chain A, Oxime-Based Post Solid-Phase Peptide Diversification:
Identification Of High Affinity Polo-Like Kinase 1
(Plk1) Polo-Box Domain Binding Peptides
Length = 237
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 32 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 91
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 92 GTESYLT 98
>pdb|4H5X|B Chain B, Human Plk1-Pbd With A Glycerol Bound At The Phophopeptide
Binding Site
pdb|4H5X|A Chain A, Human Plk1-Pbd With A Glycerol Bound At The Phophopeptide
Binding Site
pdb|4H71|B Chain B, Human Plk1-Pbd In Complex With Poloxime
((E)-4-(Hydroxyimino)-2-
Isopropyl-5-Methylcyclohexa-2,5-Dienone)
pdb|4H71|A Chain A, Human Plk1-Pbd In Complex With Poloxime
((E)-4-(Hydroxyimino)-2-
Isopropyl-5-Methylcyclohexa-2,5-Dienone)
pdb|4HCO|B Chain B, Human Plk1-Pbd In Complex With Thymoquinone At The
Phophopeptide Binding Site
pdb|4HCO|A Chain A, Human Plk1-Pbd In Complex With Thymoquinone At The
Phophopeptide Binding Site
Length = 240
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 35 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 94
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 95 GTESYLT 101
>pdb|3FVH|A Chain A, Polo-Like Kinase 1 Polo Box Domain In Complex With
Ac-Lhspta-Nh2 Peptide
pdb|3RQ7|A Chain A, Polo-Like Kinase 1 Polo Box Domain In Complex With A
C6h5(Ch2)8- Derivatized Peptide Inhibitor
Length = 237
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 32 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 91
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 92 GTESYLT 98
>pdb|3C5L|A Chain A, Polo-Like Kinase 1 Polo Box Domain In Complex With Pphspt
Peptide
Length = 221
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 26 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 85
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 86 GTESYLT 92
>pdb|3HIH|A Chain A, Structure Of Human Plk1-pbd With Glycerol And Sulfate In
The Phophopeptide Binding Site
pdb|3HIH|B Chain B, Structure Of Human Plk1-pbd With Glycerol And Sulfate In
The Phophopeptide Binding Site
Length = 223
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 28 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 87
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 88 GTESYLT 94
>pdb|3P2W|A Chain A, Unliganded Form Of Polo-Like Kinase I Polo-Box Domain
pdb|3P2Z|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With Plhspta
Phosphopeptide From Pbip1
pdb|3P34|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With Mqsptpl
Phosphopeptide
pdb|3P35|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With Mqspspl
Phosphopeptide
pdb|3P35|B Chain B, Polo-Like Kinase I Polo-Box Domain In Complex With Mqspspl
Phosphopeptide
pdb|3P35|C Chain C, Polo-Like Kinase I Polo-Box Domain In Complex With Mqspspl
Phosphopeptide
pdb|3P36|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With
Dpplhspta Phosphopeptide From Pbip1
pdb|3P37|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With
Fdpplhspta Phosphopeptide From Pbip1
pdb|3P37|B Chain B, Polo-Like Kinase I Polo-Box Domain In Complex With
Fdpplhspta Phosphopeptide From Pbip1
pdb|3P37|C Chain C, Polo-Like Kinase I Polo-Box Domain In Complex With
Fdpplhspta Phosphopeptide From Pbip1
pdb|3Q1I|A Chain A, Polo-Like Kinase I Polo-Box Domain In Complex With
Fmpppmspsm Phosphopeptide From Tcerg1
pdb|4E67|A Chain A, The Structure Of The Polo-Box Domain (Pbd) Of Polo-Like
Kinase 1 (Plk1) In Complex With
Hydrocinnamoyl-Derivatized Plhspta Peptide
pdb|4E9C|A Chain A, The Structure Of The Polo-Box Domain (Pbd) Of Polo-Like
Kinase 1 (Plk1) In Complex With Ldpplhspta
Phosphopeptide
pdb|4E9D|A Chain A, The Structure Of The Polo-Box Domain (Pbd) Of Polo-Like
Kinase 1 (Plk1) In Complex With
3-(1-Benzothiophen-2-Yl)propanoyl-Derivatized Dpplhspta
Peptide
Length = 232
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 52 EEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----- 106
EE DPA P+ WVSKWVDYSDKYG GYQL D+S GV+FND TR+I+ + ++L
Sbjct: 36 EEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERD 95
Query: 107 GTPNYIA 113
GT +Y+
Sbjct: 96 GTESYLT 102
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R L+H N+V H ++ F Y++ +L + EL+ E S+ A
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV---TGGELFEDIVAREFYSEADAS 108
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT---LC 106
I + + + Y G ++ L + G V D I + +
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 168
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GTP Y++PE+L K+ +S VD+W+ G I+Y LLVG PPF Y++IK Y P+
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 228
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
T+ A ++I ML ++P +R Q L
Sbjct: 229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + ++QILE ++Y H + I+HR+LK NL L+ VK+ DFGLA +
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R L+H N+V H ++ F Y++ +L + EL+ E S+ A
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV---TGGELFEDIVAREFYSEADAS 107
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT---LC 106
I + + + Y G ++ L + G V D I + +
Sbjct: 108 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 167
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GTP Y++PE+L K+ +S VD+W+ G I+Y LLVG PPF Y++IK Y P+
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 227
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
T+ A ++I ML ++P +R Q L
Sbjct: 228 PEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 259
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + ++QILE ++Y H + I+HR+LK NL L+ VK+ DFGLA +
Sbjct: 98 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R L+H N+V H ++ F Y++ +L + EL+ E S+ A
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV---TGGELFEDIVAREFYSEADAS 108
Query: 61 PVIW-VSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT---LC 106
I + + + Y G ++ L + G V D I + +
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 168
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
GTP Y++PE+L K+ +S VD+W+ G I+Y LLVG PPF Y++IK Y P+
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 228
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
T+ A ++I ML ++P +R Q L
Sbjct: 229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + ++QILE ++Y H + I+HR+LK NL L+ VK+ DFGLA +
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E+ I + L H N+V E K +Y+I+E S E+++ M + A+
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA---SGGEVFDYLVAHGRMKEKEARSK 119
Query: 63 I-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDL---TRMIMLANKNTLCGTPNY 111
+ V Y + ++ L D + D + + CG P Y
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179
Query: 112 IAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKK 170
APE+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 239
Query: 171 PAATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
++K+ L+L+P++R + Q++ + N
Sbjct: 240 DCENLLKRFLVLNPIKRGTLEQIMKDRWIN 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ E E R +QI+ V Y H +I+HRDLK NL L + +KI DFG + G+
Sbjct: 111 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMME-----LYNSACDLEEMS 55
+ +E I R LKH N+V H + F Y++ +L + E Y S D
Sbjct: 50 LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 56 DPAAQPVIWVSKW-VDYSDKYGFGYQLNDDSSG--VMFNDLTRMIMLANKNT----LCGT 108
+ V+ + V + D L G V D I + GT
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA-- 166
P Y++PE+L K + VD+W+ G I+Y LLVG PPF + Y +IK Y P+
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 229
Query: 167 --TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPS 224
T+ A +I +ML ++P +R + L + C S AS +M +
Sbjct: 230 WDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV---CQRSTVAS-MMHRQETVECLKK 285
Query: 225 FNSPRR 230
FN+ R+
Sbjct: 286 FNARRK 291
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + ++QILE V + H ++HRDLK NL L+ VK+ DFGLA +
Sbjct: 97 REYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 156
Query: 298 EFDGQ 302
+ D Q
Sbjct: 157 QGDQQ 161
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 2 SQEIAIH-RSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
++EI I R +H N++ ++D K+VY++ EL + EL + + S+ A
Sbjct: 63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG---ELLDKILRQKFFSEREAS 119
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSG----VMFNDLTRMIMLANKNTL--- 105
V++ ++K V+Y G ++ L D SG + D L +N L
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 106 -CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETS---TLKETYSRIKKVE 161
C T N++APE+L + G+ D+WS+G ++YT+L G PF T +E +RI +
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK 239
Query: 162 YKLPA----TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
+ L ++ A ++ KML +DP QR A +L
Sbjct: 240 FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVL 276
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF----VVKIGDFGLAA 295
R+K +E E + I + V YLH ++HRDLK N+ D ++I DFG A
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 296 RI 297
++
Sbjct: 169 QL 170
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD---------- 50
+ EI + +SL H N++ FED +YI++E C ++E SA
Sbjct: 67 IEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126
Query: 51 LEEMSDPAAQPVIWVSKWVDYSDKYGFGYQLNDDS--SGVMFNDLTRMIML---ANKNTL 105
E M + S+ V + D D S S + D + +
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y+APE+ ++ +F+ D+WS G +MY LL G PF ++L+E +K YK P
Sbjct: 187 AGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ---QKATYKEP 242
Query: 166 ------ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L A ++K+ML DP +RP AQ+LH E+F
Sbjct: 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 233 LMER---NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVV 286
L+ER R KA++E MKQ++ ++Y H ++H+DLK N+ D + +
Sbjct: 107 LLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPI 166
Query: 287 KIGDFGLAARIEFD 300
KI DFGLA + D
Sbjct: 167 KIIDFGLAELFKSD 180
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 2 SQEIAIH-RSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
S+EI I R +H N++ ++D K VY++ EL R EL + + S+ A
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG---ELLDKILRQKFFSEREAS 124
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSG----VMFNDLTRMIMLANKNTL--- 105
V+ + K V+Y G ++ L D SG + D L +N L
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 106 -CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFE---TSTLKETYSRIKKVE 161
C T N++APE+L + G+ D+WS+G ++YT+L G PF + T +E +RI +
Sbjct: 185 PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
Query: 162 YKLPA----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL----- 212
+ L T+ + A ++ KML +DP QR Q+L + LP S L
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ--KDKLPQSQLSHQDL 302
Query: 213 -----MTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPET 249
A + ++ S +P+ KP+ +R+ P T
Sbjct: 303 QLVKGAMAATYSALNSSKPTPQLKPIESSILAQRRVRKLPST 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF----VVKIGDFGLAA 295
R+K +E E F + I + V YLH ++HRDLK N+ D ++I DFG A
Sbjct: 114 RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 296 RI 297
++
Sbjct: 174 QL 175
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R LKH N+V H + Y+I +L + EL+ E S+ A
Sbjct: 57 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV---TGGELFEDIVAREYYSEADAS 113
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-LNDDS---------SGVMFNDLTRMIMLANKNT----L 105
I + + V + + G ++ L ++ + V D I + +
Sbjct: 114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GTP Y++PE+L K+ + VD+W+ G I+Y LLVG PPF Y +IK Y P
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 233
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
+ T+ A +I KML ++P +R A+ L + + S ASC+ D
Sbjct: 234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH---RSTVASCMHRQETVD-C 289
Query: 222 VPSFNSPRR---KPLMERNSKRRKAITEPETRFYMKQILEGVS 261
+ FN+ R+ L + R ++ + E +Q++E +S
Sbjct: 290 LKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAIS 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF---VVKIGDFGLAARI 297
R+ +E + ++QILE V + H ++HR+LK NL L+ VK+ DFGLA +
Sbjct: 104 REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163
Query: 298 EFDGQ 302
E + Q
Sbjct: 164 EGEQQ 168
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 103/246 (41%), Gaps = 20/246 (8%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMME-----LYNSACDLEEMS 55
+ +E I R LKH N+V H + Y+I +L + E Y S D
Sbjct: 68 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI 127
Query: 56 DPAAQPVIWVSKW-VDYSDKYGFGYQLNDDSSG--VMFNDLTRMIMLANKNT----LCGT 108
+ V+ + V + D L G V D I + + GT
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 187
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA-- 166
P Y++PE+L K+ + VD+W+ G I+Y LLVG PPF Y +IK Y P+
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 247
Query: 167 --TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPS 224
T+ A +I KML ++P +R A+ L + + S ASC+ D +
Sbjct: 248 WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH---RSTVASCMHRQETVD-CLKK 303
Query: 225 FNSPRR 230
FN+ R+
Sbjct: 304 FNARRK 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF---VVKIGDFGLAARI 297
R+ +E + ++QILE V + H ++HRDLK NL L+ VK+ DFGLA +
Sbjct: 115 REYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV 174
Query: 298 EFDGQ 302
E + Q
Sbjct: 175 EGEQQ 179
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
QEI I +SL H N++ + FED+ +Y+++ELC + E E SD AA+ +
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-SD-AARIM 112
Query: 63 IWVSKWVDYSDKYGFGYQ---------LNDDSSG----VMFNDLTRMIMLANKNTLCGTP 109
V V Y K ++ L D + F R T GTP
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA--- 166
Y++P++L + + E D WS G +MY LL G PPF T E +I++ + P
Sbjct: 173 YYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
Query: 167 -TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ A ++I+++L P QR Q L E+F +S
Sbjct: 232 LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 155 SRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+RI++ K+P + +++ ++ + P + +L +E F D L
Sbjct: 33 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDIYLVMELCTG 90
Query: 215 APRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLK 274
F+ VV ++ E + MK +L V+Y H + HRDLK
Sbjct: 91 GELFERVV-----------------HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 275 LGN-LFLSD--NFVVKIGDFGLAARIE 298
N LFL+D + +K+ DFGLAAR +
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFK 160
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
QEI I +SL H N++ + FED+ +Y+++ELC + E E SD AA+ +
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-SD-AARIM 129
Query: 63 IWVSKWVDYSDKYGFGYQ---------LNDDSSG----VMFNDLTRMIMLANKNTLCGTP 109
V V Y K ++ L D + F R T GTP
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 189
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA--- 166
Y++P++L + + E D WS G +MY LL G PPF T E +I++ + P
Sbjct: 190 YYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
Query: 167 -TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ A ++I+++L P QR Q L E+F +S
Sbjct: 249 LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 289
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 155 SRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+RI++ K+P + +++ ++ + P + +L +E F D L
Sbjct: 50 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDIYLVMELCTG 107
Query: 215 APRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLK 274
F+ VV ++ E + MK +L V+Y H + HRDLK
Sbjct: 108 GELFERVV-----------------HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 275 LGN-LFLSD--NFVVKIGDFGLAARIE 298
N LFL+D + +K+ DFGLAAR +
Sbjct: 151 PENFLFLTDSPDSPLKLIDFGLAARFK 177
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E I R LKH N+V H + F Y++ +L + EL+ E S+ A
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV---TGGELFEDIVAREYYSEADAS 133
Query: 61 PVI-WVSKWVDYSDKYGFGYQ--------LNDDSSG--VMFNDLTRMIMLANKNT----L 105
I + + V++ ++ ++ L G V D I + +
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF 193
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GTP Y++PE+L K+ + VD+W+ G I+Y LLVG PPF + Y +IK Y P
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 253
Query: 166 A----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
+ T+ A +I +ML ++P +R Q L + C S AS +M
Sbjct: 254 SPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV---CQRSTVAS-MMHRQETVEC 309
Query: 222 VPSFNSPRR 230
+ FN+ R+
Sbjct: 310 LRKFNARRK 318
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARI 297
R+ +E + + QILE V+++H H I+HRDLK NL L+ VK+ DFGLA I
Sbjct: 124 REYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--I 181
Query: 298 EFDGQRK 304
E G+++
Sbjct: 182 EVQGEQQ 188
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 2 SQEIAIH-RSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
S+EI I R +H N++ ++D K VY++ EL R EL + + S+ A
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG---ELLDKILRQKFFSEREAS 124
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSG----VMFNDLTRMIMLANKNTL--- 105
V+ + K V+Y G ++ L D SG + D L +N L
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 106 -CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFE---TSTLKETYSRIKKVE 161
C T N++APE+L + G+ D+WS+G ++YT+L G PF + T +E +RI +
Sbjct: 185 PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
Query: 162 YKLPA----TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ L T+ + A ++ KML +DP QR Q+L
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ 282
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF----VVKIGDFGLAA 295
R+K +E E F + I + V YLH ++HRDLK N+ D ++I DFG A
Sbjct: 114 RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 296 RI 297
++
Sbjct: 174 QL 175
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y++ E + + + +E A Q
Sbjct: 62 REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ 121
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + NK + CG P Y AP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCE 241
Query: 174 TMIKKMLLLDPVQRPPVAQL 193
++KK L+L+P +R + Q+
Sbjct: 242 NLLKKFLILNPSKRGTLEQI 261
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
E E R +QI+ V Y H I+HRDLK NL L + +KI DFG + F
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF 165
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E+A+ + L H N++ + FFED + Y+++E C K EL++ + ++ A +
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME-CYKGG--ELFDEIIHRMKFNEVDAAVI 141
Query: 63 I-WVSKWVDYSDKYGFGY----------QLNDDSSGVMFNDLTRMIMLANKNTL---CGT 108
I V V Y K+ + + + + + D + N+ + GT
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA-- 166
YIAPE+L K + + DVWSIG I++ LL G PPF T +E +++K +Y +
Sbjct: 202 AYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE 260
Query: 167 --TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCP 204
+ + A +IK+ML D +R Q L + + C
Sbjct: 261 WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 173 ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKP 232
+ +++++ +L + P + +L ++FF D L C FD ++
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKL--YDFFEDKRNYYLVMECYKGGELFDEII---------- 128
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIG 289
R E + +KQ+L GV+YLH H I+HRDLK NL L + ++KI
Sbjct: 129 -------HRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV 181
Query: 290 DFGLAARIEFDGQRK 304
DFGL+A F+ Q+K
Sbjct: 182 DFGLSAV--FENQKK 194
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 104 TLCGTPNYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
T CG+PNY APE+++ ++ EVD+WS G I+Y LL G PF+ + + +I+ +
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
+P L + AT++ ML +DP++R + + E+F P+ L
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ E E R +QIL V Y H H ++HRDLK N+ L + KI DFGL+
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
+T CGT Y+APEIL ++GH+ VD WS+G +MY +L G PPF K+T +I K +
Sbjct: 179 HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL 238
Query: 163 KLPATLKKPAATMIKKMLLLDPVQR 187
LP L + A ++KK+L + R
Sbjct: 239 NLPPYLTQEARDLLKKLLKRNAASR 263
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R E FY+ +I + +LH II+RDLK N+ L+ VK+ DFGL
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
Query: 299 FDG 301
DG
Sbjct: 173 HDG 175
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 51/268 (19%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H NV+ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---------------- 103
I + V+Y + F+ IML +KN
Sbjct: 119 SFIKQILDGVNYLHTKKIAH----------FDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 104 --------TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 156 RIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
I V Y + + A I+K+L+ + +R + + L P P
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH-------PWITPVDN 281
Query: 212 LMTAPRFDSVVPSFNSPRRKPLMERNSK 239
R +SVV N RK + R SK
Sbjct: 282 QQAMVRRESVVNLENF--RKQYVRRRSK 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 51/268 (19%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H NV+ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---------------- 103
I + V+Y + F+ IML +KN
Sbjct: 119 SFIKQILDGVNYLHTKKIAH----------FDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 104 --------TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 156 RIKKVEYKLPATL----KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASC 211
I V Y + A I+K+L+ + +R + + L P P
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH-------PWITPVDN 281
Query: 212 LMTAPRFDSVVPSFNSPRRKPLMERNSK 239
R +SVV N RK + R SK
Sbjct: 282 QQAMVRRESVVNLENF--RKQYVRRRSK 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 106 CGTPNYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
CG+PNY APE+++ ++ EVD+WS G I+Y LL G PF+ + + +I+ + +
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 230
Query: 165 PATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
P L + AT++ ML +DP++R + + E+F P+ L
Sbjct: 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ E E R +QIL V Y H H ++HRDLK N+ L + KI DFGL+
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSAC----DLEEMSD 56
+ +EIA+H+ LKH+N+V + F ++ F+ I +E S+ L S D E+
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 57 PAAQPVIWVSKWVD-----YSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN----TLCG 107
+ ++ K++ + D G +N S + +D LA N T G
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 185
Query: 108 TPNYIAPEILNKN--GHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIK--KVEY 162
T Y+APEI++K G+ D+WS+GC + + GKPPF E + ++ KV
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
++P ++ A I K DP +R LL EF
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD-NFVVKIGDFGLAARI 297
E FY KQILEG+ YLHD++I+HRD+K N+ ++ + V+KI DFG + R+
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSAC----DLEEMSD 56
+ +EIA+H+ LKH+N+V + F ++ F+ I +E S+ L S D E+
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 57 PAAQPVIWVSKWVD-----YSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN----TLCG 107
+ ++ K++ + D G +N S + +D LA N T G
Sbjct: 112 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 171
Query: 108 TPNYIAPEILNKN--GHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIK--KVEY 162
T Y+APEI++K G+ D+WS+GC + + GKPPF E + ++ KV
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
++P ++ A I K DP +R LL EF
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD-NFVVKIGDFGLAARI 297
E FY KQILEG+ YLHD++I+HRD+K N+ ++ + V+KI DFG + R+
Sbjct: 106 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 159
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 2 SQEIAIH-RSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
++EI I R +H N++ ++D K+VY++ EL + EL + + S+ A
Sbjct: 63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKG---GELLDKILRQKFFSEREAS 119
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSG----VMFNDLTRMIMLANKNTL--- 105
V++ ++K V+Y G ++ L D SG + D L +N L
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 106 -CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETS---TLKETYSRIKKVE 161
C T N++APE+L + G+ D+WS+G ++YT L G PF T +E +RI +
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGK 239
Query: 162 YKLPA----TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
+ L ++ A ++ K L +DP QR A +L
Sbjct: 240 FSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVL 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF----VVKIGDFGLAA 295
R+K +E E + I + V YLH ++HRDLK N+ D ++I DFG A
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 296 RI 297
++
Sbjct: 169 QL 170
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 30/242 (12%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
+ +EI HRSL+H N+V F + I++E S EL+ C+ S+ A
Sbjct: 62 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA---SGGELFERICNAGRFSEDEAR 118
Query: 60 ---QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNT 104
Q +I V Y+ ++ L D S F ++ + +
Sbjct: 119 FFFQQLI---SGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS 175
Query: 105 LCGTPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKK 159
GTP YIAPE+L K + +V DVWS G +Y +LVG PFE ++T RI
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 160 VEYKLP--ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPR 217
V+Y +P + +I ++ + DP +R + ++ + E+F P L MT +
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTT-Q 294
Query: 218 FD 219
FD
Sbjct: 295 FD 296
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q++ GVSY H ++ HRDLKL N L + +KI DFG
Sbjct: 113 SEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG 162
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H NV+ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---------------- 103
I + V+Y + F+ IML +KN
Sbjct: 119 SFIKQILDGVNYLHTKKIAH----------FDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 104 --------TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 156 RIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + + A I+K+L+ + +R + + L
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
+ CGT Y+APEIL ++GH+ VD WS+G +MY +L G PPF K+T +I K +
Sbjct: 179 HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL 238
Query: 163 KLPATLKKPAATMIKKMLLLDPVQR 187
LP L + A ++KK+L + R
Sbjct: 239 NLPPYLTQEARDLLKKLLKRNAASR 263
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R E FY+ +I + +LH II+RDLK N+ L+ VK+ DFGL
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
Query: 299 FDG 301
DG
Sbjct: 173 HDG 175
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H NV+ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---------------- 103
I + V+Y + F+ IML +KN
Sbjct: 119 SFIKQILDGVNYLHTKKIAH----------FDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 104 --------TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 156 RIKKVEYKLPATL----KKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + A I+K+L+ + +R + + L
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 42/223 (18%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H NV+ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---------------- 103
I + V+Y + F+ IML +KN
Sbjct: 119 SFIKQILDGVNYLHTKKIAH----------FDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 104 --------TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 156 RIKKVEYKLPATL----KKPAATMIKKMLLLDPVQRPPVAQLL 194
I V Y + A I+K+L+ + +R + + L
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA +
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 297 IEFDGQRK 304
I+F + K
Sbjct: 168 IDFGNEFK 175
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA +
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 297 IEFDGQRK 304
I+F + K
Sbjct: 168 IDFGNEFK 175
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA +
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 297 IEFDGQRK 304
I+F + K
Sbjct: 168 IDFGNEFK 175
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA--Q 60
+E+ I + L H N+V E K +Y+++E + + + ++E A Q
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 61 PVIWVS----KWVDYSDKYGFGYQLNDDSSGVMFN-DLTRMIMLANK-NTLCGTPNYIAP 114
V V K++ + D L+ D + + + + + NK +T CG+P Y AP
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAP 182
Query: 115 EILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKPAA 173
E+ + EVDVWS+G I+YTL+ G PF+ LKE R+ + +Y++P +
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 174 TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
++KK+L+L+P++R + Q++ + N
Sbjct: 243 NLLKKLLVLNPIKRGSLEQIMKDRWMN 269
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ E E R +QI+ V Y H I+HRDLK NL L + +KI DFG +
Sbjct: 111 MKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 116
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 117 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 235
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 106 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 166 KIDFGNEFK 174
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 116
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 117 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 235
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 106 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 166 KIDFGNEFK 174
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +ILEL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAAR 296
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA +
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 297 IEFDGQRK 304
I+F + K
Sbjct: 168 IDFGNEFK 175
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
EI ++L+H+++ + E + ++++LE C EL++ + +S+ + V
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG---ELFDYIISQDRLSEEETRVVF 114
Query: 64 -WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML---------ANKN----TLCGTP 109
+ V Y G+ ++ + ++F++ ++ ++ NK+ T CG+
Sbjct: 115 RQIVSAVAYVHSQGYAHR-DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 110 NYIAPEILNKNGH-SFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
Y APE++ + E DVWS+G ++Y L+ G PF+ + Y +I + +Y +P L
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL 233
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL-HFEFFNDY 202
+ ++++ML +DP +R + LL H DY
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY 268
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAAR 296
++E ETR +QI+ V+Y+H HRDLK NL + +K+ DFGL A+
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 59/256 (23%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I R + H N++ H +E+ V +ILEL S EL++ E +S+ A
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELV---SGGELFDFLAQKESLSEEEAT 118
Query: 61 PVI-WVSKWVDYS------------------DK-----------YGFGYQLNDDSSGVMF 90
I + V+Y DK +G +++ D GV F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEF 175
Query: 91 NDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTL 150
++ GTP ++APEI+N E D+WSIG I Y LL G PF T
Sbjct: 176 KNI------------FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 151 KETYSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ET + I V Y + + A I+K+L+ + +R + + L P
Sbjct: 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH-------PWI 276
Query: 207 LPASCLMTAPRFDSVV 222
P R +SVV
Sbjct: 277 TPVDTQQAMVRRESVV 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++++E E ++KQIL+GV+YLH KI H DLK N+ L D + +K+ DFGLA
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 296 RIEFDG 301
IE DG
Sbjct: 168 EIE-DG 172
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 30/242 (12%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
+ +EI HRSL+H N+V F + I++E S EL+ C+ S+ A
Sbjct: 62 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA---SGGELFERICNAGRFSEDEAR 118
Query: 60 ---QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNT 104
Q +I V Y ++ L D S F ++ + +
Sbjct: 119 FFFQQLI---SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS 175
Query: 105 LCGTPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKK 159
GTP YIAPE+L K + +V DVWS G +Y +LVG PFE ++T RI
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 160 VEYKLP--ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPR 217
V+Y +P + +I ++ + DP +R + ++ + E+F P L MT +
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTT-Q 294
Query: 218 FD 219
FD
Sbjct: 295 FD 296
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q++ GVSY H ++ HRDLKL N L + +KI FG
Sbjct: 113 SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 30/242 (12%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
+ +EI HRSL+H N+V F + I++E S EL+ C+ S+ A
Sbjct: 62 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA---SGGELFERICNAGRFSEDEAR 118
Query: 60 ---QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNT 104
Q +I V Y ++ L D S F ++ + +
Sbjct: 119 FFFQQLI---SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 175
Query: 105 LCGTPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKK 159
GTP YIAPE+L K + +V DVWS G +Y +LVG PFE ++T RI
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 160 VEYKLP--ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPR 217
V+Y +P + +I ++ + DP +R + ++ + E+F P L MT +
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTT-Q 294
Query: 218 FD 219
FD
Sbjct: 295 FD 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q++ GVSY H ++ HRDLKL N L + +KI DFG
Sbjct: 113 SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 162
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
+ +EI HRSL+H N+V F + I++E S EL+ C+ S+ A
Sbjct: 62 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA---SGGELFERICNAGRFSEDEAR 118
Query: 60 ---QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNT 104
Q +I V Y ++ L D S F ++ +
Sbjct: 119 FFFQQLI---SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD 175
Query: 105 LCGTPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKK 159
GTP YIAPE+L K + +V DVWS G +Y +LVG PFE ++T RI
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 160 VEYKLP--ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPR 217
V+Y +P + +I ++ + DP +R + ++ + E+F P L MT +
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTT-Q 294
Query: 218 FD 219
FD
Sbjct: 295 FD 296
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q++ GVSY H ++ HRDLKL N L + +KI FG
Sbjct: 113 SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N+ GT Y++PE+L + S D+W++GCI+Y L+ G PPF + +I K
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR 276
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 251
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFD 219
+EY PA A +++K+L+LD +R L E Y P L P F+
Sbjct: 252 LEYDFPAAFFPKARDLVEKLLVLDATKR------LGCEEMEGYGP-------LKAHPFFE 298
Query: 220 SVV 222
SV
Sbjct: 299 SVT 301
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 137 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+A+ + L H N++ + FFED + Y+++E+ R EL++ ++ S+ A ++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG---ELFDEIILRQKFSEVDAAVIM 127
Query: 64 -WVSKWVDYSDKYGFGYQ--------LNDDSSGVMFN----DLTRMIMLANK-NTLCGTP 109
V Y K+ ++ L S + L+ + K GT
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP---- 165
YIAPE+L K + + DVWS G I+Y LL G PPF T +E R++K ++
Sbjct: 188 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 246
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYC 203
+ A ++K ML +P +R + L+ + +C
Sbjct: 247 TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFC 284
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 156 RIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTA 215
R K+ K T + ++ ++ +L + P + +L +EFF D L
Sbjct: 49 RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL--YEFFEDKRNYYLVMEVYRGG 106
Query: 216 PRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKL 275
FD ++ R+ +E + MKQ+L G +YLH H I+HRDLK
Sbjct: 107 ELFDEII-----------------LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKP 149
Query: 276 GNLFL---SDNFVVKIGDFGLAARIEFDGQRK 304
NL L S + ++KI DFGL+A E G+ K
Sbjct: 150 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAA- 59
+ +EI HRSL+H N+V F + I++E S EL+ C+ S+ A
Sbjct: 61 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA---SGGELFERICNAGRFSEDEAR 117
Query: 60 ---QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNT 104
Q +I V Y ++ L D S F ++ + +
Sbjct: 118 FFFQQLI---SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 174
Query: 105 LCGTPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKK 159
GTP YIAPE+L K + +V DVWS G +Y +LVG PFE ++T RI
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 234
Query: 160 VEYKLP--ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
V+Y +P + +I ++ + DP +R + ++ + E+F P L MT
Sbjct: 235 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMT 291
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q++ GVSY H ++ HRDLKL N L + +KI DFG
Sbjct: 112 SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 161
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+A+ + L H N++ + FFED + Y+++E+ R EL++ ++ S+ A ++
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG---ELFDEIILRQKFSEVDAAVIM 110
Query: 64 -WVSKWVDYSDKYGFGYQ--------LNDDSSGVMFN----DLTRMIMLANK-NTLCGTP 109
V Y K+ ++ L S + L+ + K GT
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP---- 165
YIAPE+L K + + DVWS G I+Y LL G PPF T +E R++K ++
Sbjct: 171 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 229
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCP 204
+ A ++K ML +P +R + L+ + +C
Sbjct: 230 TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCS 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 156 RIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTA 215
R K+ K T + ++ ++ +L + P + +L +EFF D L
Sbjct: 32 RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL--YEFFEDKRNYYLVMEVYRGG 89
Query: 216 PRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKL 275
FD ++ R+ +E + MKQ+L G +YLH H I+HRDLK
Sbjct: 90 ELFDEIIL-----------------RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKP 132
Query: 276 GNLFL---SDNFVVKIGDFGLAARIEFDGQRKR 305
NL L S + ++KI DFGL+A E G+ K
Sbjct: 133 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
+ CGT Y+APE++N+ GHS D WS G +M+ +L G PF+ KET + I K +
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG 248
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
+P L A ++++ + +P R
Sbjct: 249 MPQFLSTEAQSLLRALFKRNPANR 272
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
TE + +FY+ ++ G+ +LH II+RDLK N+ L + +K+ DFGL+
Sbjct: 128 TEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +E++I + ++H NV+ H +E+ V +I EL + EL++ + E +++ A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELV---AGGELFDFLAEKESLTEEEAT 117
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFND--------------LTRMIMLANK-NT 104
+ + V Y + + +M D L I N+
Sbjct: 118 EFLKQILNGVYYLHSLQIAH-FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP ++APEI+N E D+WSIG I Y LL G PF T +ET + + V Y+
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A I+++L+ DP +R + L
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV----VKIGDFGLAA 295
++++TE E ++KQIL GV YLH +I H DLK N+ L D V +KI DFGLA
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 296 RIEFDGQRK 304
+I+F + K
Sbjct: 167 KIDFGNEFK 175
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A T CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 300 DG 301
DG
Sbjct: 158 DG 159
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A T CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 222
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 223 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 250
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 101 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 160
Query: 300 DG 301
DG
Sbjct: 161 DG 162
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A T CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 300 DG 301
DG
Sbjct: 158 DG 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A T CGTP Y+APE+L N + VD W +G +MY ++ G+ PF ++ + I
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 363
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 364 EEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHK-IIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + +E RFY +I+ + YLH K +++RDLKL NL L + +KI DFGL
Sbjct: 241 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300
Query: 299 FDG 301
DG
Sbjct: 301 KDG 303
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A T CGTP Y+APE+L N + VD W +G +MY ++ G+ PF ++ + I
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 366
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 367 EEIRFPRTLGPEAKSLLSGLLKKDPKQR 394
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHK-IIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + +E RFY +I+ + YLH K +++RDLKL NL L + +KI DFGL
Sbjct: 244 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 303
Query: 299 FDG 301
DG
Sbjct: 304 KDG 306
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF +++I K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFD 219
+EY P A +++K+L+LD +R L E Y P L P F+
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR------LGCEEMEGYGP-------LKAHPFFE 295
Query: 220 SVV 222
SV
Sbjct: 296 SVT 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N+ GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 245
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKR 273
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF +++I K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFD 219
+EY P A +++K+L+LD +R L E Y P L P F+
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR------LGCEEMEGYGP-------LKAHPFFE 295
Query: 220 SVV 222
SV
Sbjct: 296 SVT 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N+ GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKR 277
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF---------ETSTLKET 153
+T CGTPNYIAPEIL + F VD W++G +M+ ++ G+ PF + +T
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
Query: 154 YSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
+ I + + ++P +L AA+++K L DP +R
Sbjct: 271 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
SC T R V+ N LM ++RK + E RFY +I ++YLH+ II
Sbjct: 120 SCFQTESRLFFVIEYVNG---GDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGII 175
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGL 293
+RDLKL N+ L +K+ D+G+
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGM 199
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 96 MIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
M+ A N CGTP+YIAPEIL ++ VD WS G ++Y +L+G+ PF +E +
Sbjct: 170 MLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
Query: 156 RIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPV 190
I+ P L+K A ++ K+ + +P +R V
Sbjct: 230 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV 264
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
FY +I+ G+ +LH I++RDLKL N+ L + +KI DFG+
Sbjct: 123 FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 166
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 245
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKR 273
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKR 274
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 230
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 231 LEYDFPEKFFPKARDLVEKLLVLDATKR 258
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 116 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 96 MIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
M+ A N CGTP+YIAPEIL ++ VD WS G ++Y +L+G+ PF +E +
Sbjct: 169 MLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 156 RIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPV 190
I+ P L+K A ++ K+ + +P +R V
Sbjct: 229 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV 263
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
FY +I+ G+ +LH I++RDLKL N+ L + +KI DFG+
Sbjct: 122 FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI + +H +++ + +++++E S EL++ C + + ++
Sbjct: 63 IRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV---SGGELFDYICKNGRLDEKESR 119
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKNTL---CGTP 109
+ + VDY ++ ++ L D D M+++ L CG+P
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSP 179
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
NY APE+++ ++ EVD+WS G I+Y LL G PF+ + + +I + P L
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 239
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
+++K ML +DP++R + + E+F P L
Sbjct: 240 NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYL 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ E E+R +QIL GV Y H H ++HRDLK N+ L + KI DFGL+
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKR 274
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 253
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 254 LEYDFPEKFFPKARDLVEKLLVLDATKR 281
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 139 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 195
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKR 274
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 224
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 225 LEYDFPEKFFPKARDLVEKLLVLDATKR 252
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 300 DG 301
DG
Sbjct: 158 DG 159
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKR 274
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 225 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 252
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 103 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 162
Query: 300 DG 301
DG
Sbjct: 163 DG 164
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 223
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 224 LEYDFPEKFFPKARDLVEKLLVLDATKR 251
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 109 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
+ CGT Y+APE++N+ GH+ D WS G +M+ +L G PF+ KET + I K +
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
+P L A ++++ + +P R
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANR 268
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
TE + +FY+ ++ + +LH II+RDLK N+ L + +K+ DFGL+
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
+ CGT Y+APE++N+ GH+ D WS G +M+ +L G PF+ KET + I K +
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 245
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
+P L A ++++ + +P R
Sbjct: 246 MPQFLSPEAQSLLRMLFKRNPANR 269
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
TE + +FY+ ++ + +LH II+RDLK N+ L + +K+ DFGL+
Sbjct: 125 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKR 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 300 DG 301
DG
Sbjct: 158 DG 159
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 225
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 226 LEYDFPEKFFPKARDLVEKLLVLDATKR 253
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 111 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF + + I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
R + TE RFY +I+ + YLH +++RD+KL NL L + +KI DFGL
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 300 DG 301
DG
Sbjct: 158 DG 159
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKR 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A N GT Y++PE+L + D+W++GCI+Y L+ G PPF + +I K
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 226
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
+EY P A +++K+L+LD +R
Sbjct: 227 LEYDFPEKFFPKARDLVEKLLVLDATKR 254
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 249 TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
TRFY +I+ + YLH IIHRDLK N+ L+++ ++I DFG A + + ++ R
Sbjct: 112 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF ++ + I
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 224
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 225 EEIRFPRTLGPEAKSLLSGLLKKDPKQR 252
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHK-IIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + +E RFY +I+ + YLH K +++RDLKL NL L + +KI DFGL
Sbjct: 102 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 161
Query: 299 FDG 301
DG
Sbjct: 162 KDG 164
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF ++ + I
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 223
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 224 EEIRFPRTLGPEAKSLLSGLLKKDPKQR 251
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHK-IIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + +E RFY +I+ + YLH K +++RDLKL NL L + +KI DFGL
Sbjct: 101 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 160
Query: 299 FDG 301
DG
Sbjct: 161 KDG 163
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
+ CGT Y+APE++N+ GH+ D WS G +M+ +L G PF+ KET + I K +
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
+P L A ++++ + +P R
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANR 268
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
TE + +FY+ ++ + +LH II+RDLK N+ L + +K+ DFGL+
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
A CGTP Y+APE+L N + VD W +G +MY ++ G+ PF ++ + I
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E + P TL A +++ +L DP QR
Sbjct: 226 EEIRFPRTLGPEAKSLLSGLLKKDPKQR 253
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHK-IIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + +E RFY +I+ + YLH K +++RDLKL NL L + +KI DFGL
Sbjct: 103 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 162
Query: 299 FDG 301
DG
Sbjct: 163 KDG 165
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 50/239 (20%)
Query: 1 MSQEIAIHRSLKHRNVVGFHS--FFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPA 58
+ +EI + R L+H+NV+ + E+ + +Y+++E C C ++EM D
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC-----------VCGMQEMLDSV 101
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLT-RMIMLANKNTL------- 105
+ K +G+ QL D S G++ D+ ++L TL
Sbjct: 102 PE------KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV 155
Query: 106 ------------C----GTPNYIAPEILNK--NGHSFEVDVWSIGCIMYTLLVGKPPFET 147
C G+P + PEI N F+VD+WS G +Y + G PFE
Sbjct: 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
Query: 148 STLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ + + I K Y +P P + ++K ML +P +R + Q+ +F P +
Sbjct: 216 DNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA 274
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 247 PETRF-------YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
PE RF Y Q+++G+ YLH I+H+D+K GNL L+ +KI G+A
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMM-ELYNSACDLEEMSDPAA 59
MS+ + +++KH +VG H F+ + +Y +L+ + L C LE + A
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFNDL----TRMIMLANKNTLCGT 108
+ + + Y Y+ L D ++ D + + +T CGT
Sbjct: 146 AEI---ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGT 202
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATL 168
P Y+APE+L+K + VD W +G ++Y +L G PPF + E Y I +L +
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI 262
Query: 169 KKPAATMIKKMLLLDPVQR 187
A +++ +L D +R
Sbjct: 263 TNSARHLLEGLLQKDRTKR 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+R + EP RFY +I + YLH I++RDLK N+ L + + DFGL
Sbjct: 131 QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI HRSL+H N+V F + II+E S ELY C+ S+ A+
Sbjct: 63 VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA---SGGELYERICNAGRFSEDEAR 119
Query: 61 PVIW-VSKWVDYSDKYGFGYQ-------LNDDSSG-----VMFNDLTRMIMLANKNTLCG 107
+ V Y ++ L D S F ++ + + G
Sbjct: 120 FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179
Query: 108 TPNYIAPEILNKNGHSFEV-DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKKVEY 162
TP YIAPE+L + + ++ DVWS G +Y +LVG PFE ++T RI V+Y
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 163 KLPATLK--KPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSL 207
+P ++ +I ++ + DP R + ++ +F P L
Sbjct: 240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADL 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGDFG 292
+E E RF+ +Q+L GVSY H +I HRDLKL N L + +KI DFG
Sbjct: 114 SEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 42/229 (18%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
EI++ +SL H N++ FED K+ Y++ E + E + +E AA +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC--DAANIM 152
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT-RMIMLANKNTLC--------------- 106
+ + Y K+ ++ D+ I+L NKN+L
Sbjct: 153 KQILSGICYLHKHN-----------IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 107 --------GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK 158
GT YIAPE+L K ++ + DVWS G IMY LL G PPF ++ +++
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYC 203
K +Y + A +IK ML D +R + L+ + Y
Sbjct: 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN---FVVKIGDFGLAA 295
R E + MKQIL G+ YLH H I+HRD+K N+ L + +KI DFGL++
Sbjct: 140 RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF---------ETSTLKET 153
+ CGTPNYIAPEIL + F VD W++G +M+ ++ G+ PF + +T
Sbjct: 164 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
Query: 154 YSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
+ I + + ++P +L AA+++K L DP +R
Sbjct: 224 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 257
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
SC T R V+ N LM ++RK + E RFY +I ++YLH+ II
Sbjct: 73 SCFQTESRLFFVIEYVNG---GDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGII 128
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGL 293
+RDLKL N+ L +K+ D+G+
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGM 152
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF---------ETSTLKET 153
+ CGTPNYIAPEIL + F VD W++G +M+ ++ G+ PF + +T
Sbjct: 168 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
Query: 154 YSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
+ I + + ++P +L AA+++K L DP +R
Sbjct: 228 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 261
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
SC T R V+ N LM ++RK + E RFY +I ++YLH+ II
Sbjct: 77 SCFQTESRLFFVIEYVNG---GDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGII 132
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGL 293
+RDLKL N+ L +K+ D+G+
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF---------ETSTLKET 153
+ CGTPNYIAPEIL + F VD W++G +M+ ++ G+ PF + +T
Sbjct: 179 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
Query: 154 YSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
+ I + + ++P ++ AA+++K L DP +R
Sbjct: 239 FQVILEKQIRIPRSMSVKAASVLKSFLNKDPKER 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
SC T R V+ N LM ++RK + E RFY +I ++YLH+ II
Sbjct: 88 SCFQTESRLFFVIEYVNG---GDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGII 143
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGL 293
+RDLKL N+ L +K+ D+G+
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET-------STLKETYSR 156
T C T +Y APE+LN+NG+ D+WS+G I+YT+L G+ PF++ ++ E +
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK 227
Query: 157 IKKVEYKLPA----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
IKK ++ + + A +I+ +L +DP +R ++ L + E+ D + L ++ L
Sbjct: 228 IKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD--GSQLSSNPL 285
Query: 213 MT 214
MT
Sbjct: 286 MT 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIG 289
L ER K++K +E E + M++++ VS++HD ++HRDLK NL + DN +KI
Sbjct: 93 LFER-IKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKII 151
Query: 290 DFGLA 294
DFG A
Sbjct: 152 DFGFA 156
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
CGTP+YIAPEI+ + VD W+ G ++Y +L G+PPF+ E + I +
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 239
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P +L K A ++ K ++ P +R
Sbjct: 240 PKSLSKEAVSICKGLMTKHPAKR 262
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
Query: 173 ATMIKK--MLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRR 230
TM++K + LLD +PP LH SC T R V+ N
Sbjct: 65 CTMVEKRVLALLD---KPPFLTQLH--------------SCFQTVDRLYFVMEYVNGGDL 107
Query: 231 KPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGD 290
+++ K EP+ FY +I G+ +LH II+RDLKL N+ L +KI D
Sbjct: 108 MYHIQQVGK----FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIAD 163
Query: 291 FGLAARIEFDGQRKR 305
FG+ DG R
Sbjct: 164 FGMCKEHMMDGVTTR 178
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFED--SKFVYIILELCRKRSMMELYNSACDLEEMSDPA 58
+ E+ + R LKH N+V ++ D + +YI++E C + + + D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 59 ------AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----------- 101
Q + + + SD G D +F D + + L +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDG-GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 102 --KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
T GTP Y++PE +N+ ++ + D+WS+GC++Y L PPF + KE +I++
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 160 VEY-KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
++ ++P +I +ML L RP V ++L
Sbjct: 231 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLH-----DHKIIHRDLKLGNLFLSDNFVVK 287
++ + +K R+ + E M Q+ + H H ++HRDLK N+FL VK
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 288 IGDFGLAARIEFD 300
+GDFGLA + D
Sbjct: 157 LGDFGLARILNHD 169
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP+YIAPE+++ ++ +D WS G ++Y +L G PF S +TY +I E +
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P + ++ +++ D QR
Sbjct: 223 PPFFNEDVKDLLSRLITRDLSQR 245
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ + P +FY ++ + YLH II+RDLK N+ L N +KI DFG A +
Sbjct: 98 RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 123
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 243
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 244 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
K + E + Y Q+L V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 115 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 117
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
K + E + Y Q+L V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 117
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
K + E + Y Q+L V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 117
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
K + E + Y Q+L V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 61 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 116
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 236
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 237 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
K + E + Y Q+L V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 108 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 201 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 256
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 376
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 377 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 142 KPPFETSTLKETYSRI-KKVEYKL-PATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
K FE T K+ RI K ++ + A PA + ++ +L + P + ++ +F
Sbjct: 166 KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 225
Query: 200 NDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEG 259
DY + + FD VV + K + E + Y Q+L
Sbjct: 226 EDY---YIVLELMEGGELFDKVVGN-----------------KRLKEATCKLYFYQMLLA 265
Query: 260 VSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 301
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ EI I + L H ++ +FF D++ YI+LEL EL++ + + + +
Sbjct: 187 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCK 242
Query: 61 PVIW-VSKWVDYSDKYGFGYQ----------LNDDSSGVMFNDLTRMIMLANKN---TLC 106
+ + V Y + G ++ ++ + D +L + TLC
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 107 GTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKVEY 162
GTP Y+APE+L G++ VD WS+G I++ L G PPF E T +I +Y
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 362
Query: 163 ----KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
++ A + + A ++KK+L++DP R + L + D
Sbjct: 363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 142 KPPFETSTLKETYSRI-KKVEYKL-PATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
K FE T K+ RI K ++ + A PA + ++ +L + P + ++ +F
Sbjct: 152 KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211
Query: 200 NDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEG 259
DY + + FD VV + K + E + Y Q+L
Sbjct: 212 EDY---YIVLELMEGGELFDKVVGN-----------------KRLKEATCKLYFYQMLLA 251
Query: 260 VSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFG 292
V YLH++ IIHRDLK N+ LS ++ ++KI DFG
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
T CGTP+YIAPEIL + + VD W++G ++Y +L G PFE + + I E
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
P L + A ++K + +P R
Sbjct: 243 YPTWLHEDATGILKSFMTKNPTMR 266
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 211 CLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIH 270
C T R V+ N LM K R+ E RFY +I+ + +LHD II+
Sbjct: 92 CFQTPDRLFFVMEFVNG---GDLMFHIQKSRR-FDEARARFYAAEIISALMFLHDKGIIY 147
Query: 271 RDLKLGNLFLSDNFVVKIGDFGLA 294
RDLKL N+ L K+ DFG+
Sbjct: 148 RDLKLDNVLLDHEGHCKLADFGMC 171
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 50/260 (19%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ EDS YI+ EL + EL++ + S+ AA+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELY---TGGELFDEIIKRKRFSEHDAARI 126
Query: 62 VIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT-RMIMLANKNTLC-------------- 106
+ V + Y K+ ++ DL I+L +K C
Sbjct: 127 IKQVFSGITYMHKHN-----------IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 107 ---------GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
GT YIAPE+L + + + DVWS G I+Y LL G PPF K Y +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYG---KNEYDIL 231
Query: 158 KKVE-----YKLPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPAS 210
K+VE + LP T+ A +I+KML P R Q L + Y + S
Sbjct: 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS 291
Query: 211 CLMTAPRFDSVVPSFNSPRR 230
L + + + F + ++
Sbjct: 292 DLPSLESAMTNIRQFQAEKK 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 139 LVGKPPFETSTLKETYSRIKKVEYKLPATLK-----KPAATMIKKMLLLDPVQRPPVAQL 193
++GK F + + RI + EY + K K +T+++++ LL + P + +L
Sbjct: 29 MLGKGSF--GEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 194 LHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYM 253
FE D + FD ++ +RK +E + +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEII-----------------KRKRFSEHDAARII 127
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAA 295
KQ+ G++Y+H H I+HRDLK N+ L + +KI DFGL+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY----SRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF ++T + RI+
Sbjct: 168 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y P + + + A +I+ +L DP +R + Q ++ + N +P + L T
Sbjct: 228 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ--SMVVPQTPLHT 285
Query: 215 A 215
A
Sbjct: 286 A 286
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E M+ I + +LH H I HRD+K NL + + V+K+ DFG A
Sbjct: 104 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY----SRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF ++T + RI+
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y P + + + A +I+ +L DP +R + Q ++ + N +P + L T
Sbjct: 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ--SMVVPQTPLHT 304
Query: 215 A 215
A
Sbjct: 305 A 305
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E M+ I + +LH H I HRD+K NL + + V+K+ DFG A
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFED--SKFVYIILELCRKRSMMELYNSACDLEEMSDPA 58
+ E+ + R LKH N+V ++ D + +YI++E C + + + D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 59 ------AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----------- 101
Q + + + SD G D +F D + + L +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDG-GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 102 --KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
GTP Y++PE +N+ ++ + D+WS+GC++Y L PPF + KE +I++
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 160 VEY-KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
++ ++P +I +ML L RP V ++L
Sbjct: 231 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLH-----DHKIIHRDLKLGNLFLSDNFVVK 287
++ + +K R+ + E M Q+ + H H ++HRDLK N+FL VK
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 288 IGDFGLAARIEFD 300
+GDFGLA + D
Sbjct: 157 LGDFGLARILNHD 169
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 3 QEIAIHRSLK-HRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP---- 57
+E+ I R + H N++ +E + F +++ +L +K + + L E
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 58 AAQPVIWVSKWVD--YSDKYGFGYQLNDDSSGVMFNDLTRMIML---ANKNTLCGTPNYI 112
A VI ++ + D L+DD + + D L ++CGTP+Y+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSVCGTPSYL 190
Query: 113 APEIL------NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
APEI+ N G+ EVD+WS G IMYTLL G PPF I Y+ +
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
++ + L++ P +R + L FF Y
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
++E ETR M+ +LE + LH I+HRDLK N+ L D+ +K+ DFG + +++
Sbjct: 120 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 50/232 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ EDS YI+ EL + EL++ + S+ AA+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGEL---YTGGELFDEIIKRKRFSEHDAARI 126
Query: 62 VIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT-RMIMLANKNTLC-------------- 106
+ V + Y K+ ++ DL I+L +K C
Sbjct: 127 IKQVFSGITYMHKHN-----------IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 107 ---------GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
GT YIAPE+L + + + DVWS G I+Y LL G PPF K Y +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYG---KNEYDIL 231
Query: 158 KKVE-----YKLPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
K+VE + LP T+ A +I+KML P R Q L + Y
Sbjct: 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 139 LVGKPPFETSTLKETYSRIKKVEYKLPATLK-----KPAATMIKKMLLLDPVQRPPVAQL 193
++GK F + + RI + EY + K K +T+++++ LL + P + +L
Sbjct: 29 MLGKGSF--GEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 194 LHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYM 253
FE D + FD ++ +RK +E + +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEII-----------------KRKRFSEHDAARII 127
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAA 295
KQ+ G++Y+H H I+HRDLK N+ L + +KI DFGL+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 3 QEIAIHRSLK-HRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP---- 57
+E+ I R + H N++ +E + F +++ +L +K + + L E
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 58 AAQPVIWVSKWVD--YSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTL---CGTPNYI 112
A VI ++ + D L+DD + + D L L CGTP+Y+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYL 190
Query: 113 APEIL------NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
APEI+ N G+ EVD+WS G IMYTLL G PPF I Y+ +
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 167 ----TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
++ + L++ P +R + L FF Y
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
++E ETR M+ +LE + LH I+HRDLK N+ L D+ +K+ DFG + +++
Sbjct: 120 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFED--SKFVYIILELCRKRSMMELYNSACDLEEMSDPA 58
+ E+ + R LKH N+V ++ D + +YI++E C + + + D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 59 ------AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----------- 101
Q + + + SD G D +F D + + L +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDG-GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 102 --KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
GTP Y++PE +N+ ++ + D+WS+GC++Y L PPF + KE +I++
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 160 VEY-KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
++ ++P +I +ML L RP V ++L
Sbjct: 231 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLH-----DHKIIHRDLKLGNLFLSDNFVVK 287
++ + +K R+ + E M Q+ + H H ++HRDLK N+FL VK
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 288 IGDFGLAARIEFD 300
+GDFGLA + D
Sbjct: 157 LGDFGLARILNHD 169
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 50/232 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ EDS YI+ EL + EL++ + S+ AA+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGEL---YTGGELFDEIIKRKRFSEHDAARI 126
Query: 62 VIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT-RMIMLANKNTLC-------------- 106
+ V + Y K+ ++ DL I+L +K C
Sbjct: 127 IKQVFSGITYMHKHN-----------IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 107 ---------GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
GT YIAPE+L + + + DVWS G I+Y LL G PPF K Y +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYG---KNEYDIL 231
Query: 158 KKVE-----YKLPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
K+VE + LP T+ A +I+KML P R Q L + Y
Sbjct: 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 139 LVGKPPFETSTLKETYSRIKKVEYKLPATLK-----KPAATMIKKMLLLDPVQRPPVAQL 193
++GK F + + RI + EY + K K +T+++++ LL + P + +L
Sbjct: 29 MLGKGSF--GEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 194 LHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYM 253
FE D + FD ++ +RK +E + +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEII-----------------KRKRFSEHDAARII 127
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAA 295
KQ+ G++Y+H H I+HRDLK N+ L + +KI DFGL+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
TLCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 242
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 243 FPSHFSSDLKDLLRNLLQVDLTKR 266
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 119 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 178
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
TLCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 278 FPSHFSSDLKDLLRNLLQVDLTKR 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 154 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
TLCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 164 LPATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 19/219 (8%)
Query: 3 QEIAIHRSLK-HRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEE-----MSD 56
+E+ I R + H N++ +E + F +++ +L +K + + L E +
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTL---CGTPNYIA 113
+ + + K L DD + D L L CGTP+Y+A
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLA 178
Query: 114 PEIL------NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA- 166
PEI+ N G+ EVD+WS G IMYTLL G PPF I Y+ +
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 238
Query: 167 ---TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
++ + L++ P +R + L FF Y
Sbjct: 239 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
++E ETR M+ +LE + LH I+HRDLK N+ L D+ +K+ DFG + +++
Sbjct: 107 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 162
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQPV 62
EI + L H N++ FE + ++LEL + EL++ + S+ AA V
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELV---TGGELFDRIVEKGYYSERDAADAV 154
Query: 63 IWVSKWVDYSDKYGFG----------YQLNDDSSGVMFNDLTRMIMLANK---NTLCGTP 109
+ + V Y + G Y + + D ++ ++ T+CGTP
Sbjct: 155 KQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP 214
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE-TYSRIKKVEYKLPA-- 166
Y APEIL + EVD+WS+G I Y LL G PF + + RI EY +
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW 274
Query: 167 --TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ A +++K+++LDP +R Q L
Sbjct: 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLAARIE 298
+KQILE V+YLH++ I+HRDLK NL + + +KI DFGL+ +E
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ + FFED + Y++ E+ + EL++ + S+ AA+
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY---TGGELFDEIISRKRFSEVDAARI 154
Query: 62 VIWVSKWVDYSDKYGFGYQ--------LNDDSSG-----VMFNDLTRMIMLANKNTLCGT 108
+ V + Y K ++ L S + F T GT
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-----YK 163
YIAPE+L+ + + DVWS G I+Y LL G PPF + Y +KKVE ++
Sbjct: 215 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVEKGKYTFE 270
Query: 164 LPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
LP + + A +I+KML P R L E+ Y + P D+
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV----PSLDNA 326
Query: 222 V 222
+
Sbjct: 327 I 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRF 218
KV K K ++++++ LL + P + +L +EFF D L F
Sbjct: 80 KVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--YEFFEDKGYFYLVGEVYTGGELF 137
Query: 219 DSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNL 278
D ++ RK +E + ++Q+L G++Y+H +KI+HRDLK NL
Sbjct: 138 DEIIS-----------------RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENL 180
Query: 279 FL---SDNFVVKIGDFGLAARIE 298
L S + ++I DFGL+ E
Sbjct: 181 LLESKSKDANIRIIDFGLSTHFE 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ + FFED + Y++ E+ + EL++ + S+ AA+
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY---TGGELFDEIISRKRFSEVDAARI 155
Query: 62 VIWVSKWVDYSDKYGFGYQ--------LNDDSSG-----VMFNDLTRMIMLANKNTLCGT 108
+ V + Y K ++ L S + F T GT
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-----YK 163
YIAPE+L+ + + DVWS G I+Y LL G PPF + Y +KKVE ++
Sbjct: 216 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVEKGKYTFE 271
Query: 164 LPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
LP + + A +I+KML P R L E+ Y + P D+
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV----PSLDNA 327
Query: 222 V 222
+
Sbjct: 328 I 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRF 218
KV K K ++++++ LL + P + +L +EFF D L F
Sbjct: 81 KVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--YEFFEDKGYFYLVGEVYTGGELF 138
Query: 219 DSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNL 278
D ++ RK +E + ++Q+L G++Y+H +KI+HRDLK NL
Sbjct: 139 DEIIS-----------------RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENL 181
Query: 279 FL---SDNFVVKIGDFGLAARIE 298
L S + ++I DFGL+ E
Sbjct: 182 LLESKSKDANIRIIDFGLSTHFE 204
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ + FFED + Y++ E+ + EL++ + S+ AA+
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY---TGGELFDEIISRKRFSEVDAARI 131
Query: 62 VIWVSKWVDYSDKYGFGYQ--------LNDDSSG-----VMFNDLTRMIMLANKNTLCGT 108
+ V + Y K ++ L S + F T GT
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-----YK 163
YIAPE+L+ + + DVWS G I+Y LL G PPF + Y +KKVE ++
Sbjct: 192 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVEKGKYTFE 247
Query: 164 LPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
LP + + A +I+KML P R L E+ Y + P D+
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV----PSLDNA 303
Query: 222 V 222
+
Sbjct: 304 I 304
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRF 218
KV K K ++++++ LL + P + +L +EFF D L F
Sbjct: 57 KVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--YEFFEDKGYFYLVGEVYTGGELF 114
Query: 219 DSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNL 278
D ++ RK +E + ++Q+L G++Y+H +KI+HRDLK NL
Sbjct: 115 DEIIS-----------------RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENL 157
Query: 279 FL---SDNFVVKIGDFGLAARIE 298
L S + ++I DFGL+ E
Sbjct: 158 LLESKSKDANIRIIDFGLSTHFE 180
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
CGTP+YIAPEI+ + VD W+ G ++Y +L G+ PFE E + I +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P ++ K A + K ++ P +R
Sbjct: 241 PKSMSKEAVAICKGLMTKHPGKR 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 173 ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKP 232
TM++K +L P +PP LH SC T R V+ N
Sbjct: 66 CTMVEKRVLALP-GKPPFLTQLH--------------SCFQTMDRLYFVMEYVNGGDLMY 110
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
+++ + EP FY +I G+ +L II+RDLKL N+ L +KI DFG
Sbjct: 111 HIQQVGR----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 166
Query: 293 LAARIEFDG 301
+ +DG
Sbjct: 167 MCKENIWDG 175
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
CGTP+YIAPEI+ + VD W+ G ++Y +L G+ PFE E + I +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P ++ K A + K ++ P +R
Sbjct: 562 PKSMSKEAVAICKGLMTKHPGKR 584
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 173 ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKP 232
TM++K +L P +PP LH SC T R V+ N
Sbjct: 387 CTMVEKRVLALP-GKPPFLTQLH--------------SCFQTMDRLYFVMEYVNGGDLMY 431
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
+++ + EP FY +I G+ +L II+RDLKL N+ L +KI DFG
Sbjct: 432 HIQQVGR----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 293 LAARIEFDG 301
+ +DG
Sbjct: 488 MCKENIWDG 496
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N++ + FFED + Y++ E+ + EL++ + S+ AA+
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY---TGGELFDEIISRKRFSEVDAARI 137
Query: 62 VIWVSKWVDYSDKYGFGYQ--------LNDDSSG-----VMFNDLTRMIMLANKNTLCGT 108
+ V + Y K ++ L S + F T GT
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY--KLPA 166
YIAPE+L+ + + DVWS G I+Y LL G PPF + + +++K +Y +LP
Sbjct: 198 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 256
Query: 167 --TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
+ + A +I+KML P R L E+ Y
Sbjct: 257 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRF 218
KV K K ++++++ LL + P + +L +EFF D L F
Sbjct: 63 KVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--YEFFEDKGYFYLVGEVYTGGELF 120
Query: 219 DSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNL 278
D ++ RK +E + ++Q+L G++Y+H +KI+HRDLK NL
Sbjct: 121 DEIIS-----------------RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENL 163
Query: 279 FL---SDNFVVKIGDFGLAARIE 298
L S + ++I DFGL+ E
Sbjct: 164 LLESKSKDANIRIIDFGLSTHFE 186
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 113/240 (47%), Gaps = 53/240 (22%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYN----------SACD--L 51
E+ I R +H NVV + + + +++++E + ++ ++ + + C+ L
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL 151
Query: 52 EEMSDPAAQPVI-----------WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA 100
+ ++ AQ VI + V SD +GF Q++ D +
Sbjct: 152 QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSD-FGFCAQISKD--------------VP 196
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK-- 158
+ L GTP ++APE+++++ ++ EVD+WS+G ++ ++ G+PP+ + + + R++
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS 256
Query: 159 -----KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLM 213
K +K+ L+ +++ML+ DP +R +LL F T LP CL+
Sbjct: 257 PPPKLKNSHKVSPVLRD----FLERMLVRDPQERATAQELLDHPFL---LQTGLP-ECLV 308
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQR 303
+ E + + +L+ ++YLH +IHRD+K ++ L+ + VK+ DFG A+I D +
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 304 KR 305
++
Sbjct: 198 RK 199
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 13 HRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVIW-VSKWVDY 71
H +++ +E S F++++ +L RK EL++ + +S+ + ++ + + V +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRK---GELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 72 SDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLA---NKNTLCGTPNYIAPEILNKN- 120
++ L DD+ + +D L LCGTP Y+APEIL +
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 121 -----GHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA----TLKKP 171
G+ EVD+W+ G I++TLL G PPF I + +Y+ +
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST 335
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+I ++L +DP R Q L FF
Sbjct: 336 VKDLISRLLQVDPEARLTAEQALQHPFFE 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
A++E ETR M+ +LE VS+LH + I+HRDLK N+ L DN +++ DFG + +E
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 106 CGTPNYIAPEIL--NKNGHSFEVDVWSIGCIMYTLLVGKPPF----ETSTLKETYSRIKK 159
CGT Y+AP+I+ +GH VD WS+G +MY LL G PF E ++ E RI K
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 280
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQR 187
E P + A +I+++L+ DP +R
Sbjct: 281 SEPPYPQEMSALAKDLIQRLLMKDPKKR 308
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+R+ TE E + Y+ +I+ + +LH II+RD+KL N+ L N V + DFGL+
Sbjct: 152 QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+QI +GV Y+H K+IHRDLK N+FL D VKIGDFGL ++ DG+R R
Sbjct: 143 EQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 84 DSSGVMFNDLTRMIMLANKNTLC---GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLL- 139
D+ V D + L N GT Y++PE ++ + EVD++++G I+ LL
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
Query: 140 VGKPPFETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
V FETS ++ ++ + + K T+++K+L P RP +++L
Sbjct: 231 VCDTAFETSKF---FTDLR--DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSD-PAAQP 61
+E+ + + L H N+ + FFED + Y++ E+ + EL++ + S+ AA+
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVY---TGGELFDEIISRKRFSEVDAARI 131
Query: 62 VIWVSKWVDYSDKYGFGYQ--------LNDDSSG-----VMFNDLTRMIMLANKNTLCGT 108
+ V + Y K ++ L S + F T GT
Sbjct: 132 IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGT 191
Query: 109 PNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-----YK 163
YIAPE+L+ + + DVWS G I+Y LL G PPF + Y +KKVE ++
Sbjct: 192 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVEKGKYTFE 247
Query: 164 LPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSV 221
LP + + A +I+K L P R L E+ Y + + P D+
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQIS----VDVPSLDNA 303
Query: 222 V 222
+
Sbjct: 304 I 304
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRF 218
KV K K ++++++ LL + P + +L +EFF D L F
Sbjct: 57 KVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL--YEFFEDKGYFYLVGEVYTGGELF 114
Query: 219 DSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNL 278
D ++ RK +E + ++Q+L G++Y H +KI+HRDLK NL
Sbjct: 115 DEIIS-----------------RKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENL 157
Query: 279 FL---SDNFVVKIGDFGLAARIE 298
L S + ++I DFGL+ E
Sbjct: 158 LLESKSKDANIRIIDFGLSTHFE 180
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKR 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 126 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKR 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 126 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDL----EEMSDPA 58
+E+A+ ++KH N+V + FE++ +YI+++ C + + N+ + +++ D
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 59 AQPVIWVSKWVD----YSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC----GTPN 110
Q + + D + D L D + V D +L + L GTP
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGT-VQLGDFGIARVLNSTVELARACIGTPY 190
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKK 170
Y++PEI ++ + D+W++GC++Y L K FE ++K +I + P +L
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-PVSLHY 249
Query: 171 P--AATMIKKMLLLDPVQRPPVAQLLHFEF----FNDYCPTSLPAS--CLMTAPRFDSVV 222
+++ ++ +P RP V +L F + L A CL T +F S
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQ- 308
Query: 223 PSFNSPRRKPLMERNSKR---RKAITEPETRF 251
P ++P +NS + IT+P ++
Sbjct: 309 ---PIPAKRPASGQNSISVMPAQKITKPAAKY 337
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N+++ E + + QI + ++HD KI+HRD+K N+FL+ + V++GDFG+A
Sbjct: 115 NAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK 192
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK 192
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKR 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 154 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 244
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 245 PSHFSSDLKDLLRNLLQVDLTKR 267
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + + +++ DFG A R++
Sbjct: 120 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK 179
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFGLA R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK 192
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 252
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 253 PSHFSSDLKDLLRNLLQVDLTKR 275
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 128 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 187
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKR 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 154 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +K+ DFG A R++
Sbjct: 134 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKR 281
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 134 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +K+ DFGLA R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK 192
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 83 DDSSGVMFNDLTRMIMLANKNTLCG----TPNYIAPEILNKNGHSFEVDVWSIGCIMYTL 138
++S+ V D I L + G TP+++APE++ + + VDVW G I++ L
Sbjct: 167 ENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 139 LVGKPPFETSTLKETYSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L G PF T + + I K +YK+ + + + A ++++ML+LDP +R V + L
Sbjct: 227 LSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 195 HFEFFND 201
+ + +
Sbjct: 286 NHPWLKE 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFGLAARIEFDG 301
+E YM+QILE + Y HD+ IIHRD+K N+ L+ ++ VK+GDFG+A ++ G
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 106
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 107 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 226
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 227 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 99 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158
Query: 303 RK 304
+
Sbjct: 159 ER 160
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 180
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 181 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLKK--- 170
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 295
Query: 171 --PA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 296 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 337
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 137
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 138 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLK---- 169
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 252
Query: 170 -KPA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 253 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 294
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 257
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 258 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLKK--- 170
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 372
Query: 171 --PA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 414
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 135
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 136 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLK---- 169
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 250
Query: 170 -KPA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 251 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 292
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLD 183
P+ +++ +L +D
Sbjct: 258 PSHFSSDLKDLLRNLLQVD 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 130
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 131 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLK---- 169
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 245
Query: 170 -KPA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 246 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 287
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R +H NVV ++ + +++++E ++ ++ EE V+
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 126
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGTPNYIAP 114
++ V + D L D V +D ++ + L GTP ++AP
Sbjct: 127 QALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKVEYKLPATLKK--- 170
E++++ + EVD+WS+G ++ ++ G+PP F LK +K + LP LK
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHK 241
Query: 171 --PA-ATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCL 212
P+ + ++L+ DP QR A+LL F P PAS +
Sbjct: 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP---PASIV 283
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+L+ +S LH +IHRD+K ++ L+ + VK+ DFG A++ + R++
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 212 LMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHR 271
++ P D + F + P+ME + K ++E + RFY + +++G+ YLH KIIHR
Sbjct: 104 VLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQKIIHR 161
Query: 272 DLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
D+K NL + ++ +KI DFG++ EF G
Sbjct: 162 DIKPSNLLVGEDGHIKIADFGVSN--EFKG 189
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFED--SKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
QEIAI + L H NVV +D +Y++ EL + +ME+ E+ + Q
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 61 PVIWVSKWVDYSDKYGFGYQ----LNDDSSGVMFNDLTRMIMLANKNTL----CGTPNYI 112
+I +++ Y + L + + D + L GTP ++
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFM 204
Query: 113 APEILNKNGHSFE---VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP--AT 167
APE L++ F +DVW++G +Y + G+ PF + +S+IK + P
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPD 264
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQL-LH 195
+ + +I +ML +P R V ++ LH
Sbjct: 265 IAEDLKDLITRMLDKNPESRIVVPEIKLH 293
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP Y+AP I+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 183 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 243 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 300
Query: 215 A 215
+
Sbjct: 301 S 301
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 118 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 294
Query: 215 A 215
+
Sbjct: 295 S 295
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 181 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 241 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 298
Query: 215 A 215
+
Sbjct: 299 S 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I+ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +C
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 76 GFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIM 135
GFG + SG++ GTP+++APE++ + + VDVW G I+
Sbjct: 178 GFGVAIQLGESGLV------------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 225
Query: 136 YTLLVGKPPFETSTLKETYSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVA 191
+ LL G PF T + + I K +YK+ + + + A ++++ML+LDP +R V
Sbjct: 226 FILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY 284
Query: 192 QLLHFEFFND 201
+ L+ + +
Sbjct: 285 EALNHPWLKE 294
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFGLAARIEFDG 301
+E YM+QILE + Y HD+ IIHRD+K + L+ ++ VK+G FG+A ++ G
Sbjct: 130 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+QI +GV Y+H K+I+RDLK N+FL D VKIGDFGL ++ DG+R R
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR 180
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 84 DSSGVMFNDLTRMIMLANKNTLC---GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLL- 139
D+ V D + L N GT Y++PE ++ + EVD++++G I+ LL
Sbjct: 157 DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
Query: 140 VGKPPFETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
V FETS ++ ++ + + K T+++K+L P RP +++L
Sbjct: 217 VCDTAFETSKF---FTDLR--DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 338
Query: 215 A 215
+
Sbjct: 339 S 339
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 227 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 286
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 287 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 344
Query: 215 A 215
+
Sbjct: 345 S 345
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 162 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 176 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 235
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 236 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 293
Query: 215 A 215
+
Sbjct: 294 S 294
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 182 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 242 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 299
Query: 215 A 215
+
Sbjct: 300 S 300
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 191 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 251 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 308
Query: 215 A 215
+
Sbjct: 309 S 309
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 126 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 294
Query: 215 A 215
+
Sbjct: 295 S 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+
Sbjct: 175 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T
Sbjct: 235 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHT 292
Query: 215 A 215
+
Sbjct: 293 S 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 76 GFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIM 135
GFG + SG++ GTP+++APE++ + + VDVW G I+
Sbjct: 176 GFGVAIQLGESGLV------------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
Query: 136 YTLLVGKPPFETSTLKETYSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVA 191
+ LL G PF T + + I K +YK+ + + + A ++++ML+LDP +R V
Sbjct: 224 FILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY 282
Query: 192 QLLHFEFFND 201
+ L+ + +
Sbjct: 283 EALNHPWLKE 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS---DNFVVKIGDFGLAARIEFDG 301
+E YM+QILE + Y HD+ IIHRD+K + L+ ++ VK+G FG+A ++ G
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIKKVE 161
C TP Y+APE+L + D+WS+G IMY LL G PPF + + +RI+ +
Sbjct: 178 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
Query: 162 YKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTA 215
Y+ P + + + +I+ +L +P QR + + ++ + T +P + L T+
Sbjct: 238 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHTS 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
+ GTP Y+APEILN + + D+W+IG I Y LL PF +ETY I +V
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 165 P----ATLKKPAATMIKKMLLLDPVQRPPV------AQLLHFEFFNDYCPTSLPAS 210
+++ + A I+ +L+ +P +RP + L ++F N + P +S
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSS 308
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF---VVKIGDFGLAARI 297
++E + +KQILEGV YLH + I+H DLK N+ LS + +KI DFG++ +I
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
LCGTP +APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
L GTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ +TE + + KQ L+ ++YLHD+KIIHRDLK GN+ + + +K+ DFG++A+
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
Query: 301 GQRK 304
QR+
Sbjct: 189 IQRR 192
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 94 TRMIMLANKNTLCGTPNYIAPEIL-----NKNGHSFEVDVWSIGCIMYTLLVGKPPFETS 148
TR I +++ GTP ++APE++ + ++ DVWS+G + + +PP
Sbjct: 186 TRTIQ--RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 149 TLKETYSRIKKVEYKLPATLKKPA------ATMIKKMLLLDPVQRPPVAQLLHFEF 198
+I K E P TL +P+ +KK L + R +QLL F
Sbjct: 244 NPMRVLLKIAKSE---PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ +TE + + KQ L+ ++YLHD+KIIHRDLK GN+ + + +K+ DFG++A+
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 301 GQRK 304
QR+
Sbjct: 189 IQRR 192
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 94 TRMIMLANKNTLCGTPNYIAPEIL-----NKNGHSFEVDVWSIGCIMYTLLVGKPPFETS 148
TR I +++ GTP ++APE++ + ++ DVWS+G + + +PP
Sbjct: 186 TRXIQ--RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 149 TLKETYSRIKKVEYKLPATLKKPA------ATMIKKMLLLDPVQRPPVAQLLHFEF 198
+I K E P TL +P+ +KK L + R +QLL F
Sbjct: 244 NPMRVLLKIAKSE---PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ +TE + + KQ L+ ++YLHD+KIIHRDLK GN+ + + +K+ DFG++A+
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 301 GQRK 304
QR+
Sbjct: 189 IQRR 192
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 16/116 (13%)
Query: 94 TRMIMLANKNTLCGTPNYIAPEIL-----NKNGHSFEVDVWSIGCIMYTLLVGKPPFETS 148
TR I ++ GTP ++APE++ + ++ DVWS+G + + +PP
Sbjct: 186 TRXIQ--RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 149 TLKETYSRIKKVEYKLPATLKKPA------ATMIKKMLLLDPVQRPPVAQLLHFEF 198
+I K E P TL +P+ +KK L + R +QLL F
Sbjct: 244 NPMRVLLKIAKSE---PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 34/241 (14%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLE-EMS-DPAAQ 60
+EI L+H +V H FED + +I E S EL+ D +MS D A +
Sbjct: 97 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM---SGGELFEKVADEHNKMSEDEAVE 153
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFN----------DLTRMIMLANKNTL---CG 107
+ V K + + + + L+ +MF D L K ++ G
Sbjct: 154 YMRQVCKGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG 212
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP-- 165
T + APE+ + D+WS+G + Y LL G PF ET +K ++ +
Sbjct: 213 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 272
Query: 166 --ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVP 223
+ + + I+K+LL DP R + Q L P P + AP DS +P
Sbjct: 273 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-------PWLTPGN----APGRDSQIP 321
Query: 224 S 224
S
Sbjct: 322 S 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD--NFVVKIGD 290
L E+ + ++E E YM+Q+ +G+ ++H++ +H DLK N+ + + +K+ D
Sbjct: 135 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID 194
Query: 291 FGLAARIE 298
FGL A ++
Sbjct: 195 FGLTAHLD 202
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 28 FVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV-IWVSKWVDYSDKYG---------- 76
++YI ++LCRK ++ + N C +EE + + +++ V++ G
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN 148
Query: 77 -------------FGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHS 123
FG D LT M A GT Y++PE ++ N +S
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 124 FEVDVWSIGCIMYTLLVGKPPFETSTLK-ETYSRIKKVEYKLPATLKKPAA-TMIKKMLL 181
+VD++S+G I++ LL PF T + T + ++ +++ T K P M++ ML
Sbjct: 209 HKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLS 265
Query: 182 LDPVQRPPVAQLLHFEFFND 201
P++RP ++ F D
Sbjct: 266 PSPMERPEAINIIENAVFED 285
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRK 304
QI E V +LH ++HRDLK N+F + + VVK+GDFGL ++ D + +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAAR 296
+ +TE + + KQ L+ ++YLHD+KIIHRDLK GN+ + + +K+ DFG++A+
Sbjct: 102 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 157
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 99 LANKNTLCGTPNYIAPEIL-----NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKET 153
+ +++ GTP ++APE++ + ++ DVWS+G + + +PP
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
Query: 154 YSRIKKVEYKLPATLKKPA------ATMIKKMLLLDPVQRPPVAQLLHFEF 198
+I K E P TL +P+ +KK L + R +QLL F
Sbjct: 223 LLKIAKSE---PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNTL---CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYT 137
L DD + +DL + + T+ GT Y+APE++ ++F D W++GC++Y
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 377
Query: 138 LLVGKPPFETSTLK----ETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ G+ PF+ K E +K+V + A ++ ++L DP +R
Sbjct: 378 MIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 247 PETR--FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
PE R FY +I G+ LH +I++RDLK N+ L D+ ++I D GLA +
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNTL---CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYT 137
L DD + +DL + + T+ GT Y+APE++ ++F D W++GC++Y
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 377
Query: 138 LLVGKPPFETSTLK----ETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ G+ PF+ K E +K+V + A ++ ++L DP +R
Sbjct: 378 MIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 247 PETR--FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
PE R FY +I G+ LH +I++RDLK N+ L D+ ++I D GLA +
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 34/241 (14%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLE-EMS-DPAAQ 60
+EI L+H +V H FED + +I E S EL+ D +MS D A +
Sbjct: 203 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM---SGGELFEKVADEHNKMSEDEAVE 259
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFN----------DLTRMIMLANKNTL---CG 107
+ V K + + + + L+ +MF D L K ++ G
Sbjct: 260 YMRQVCKGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG 318
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP-- 165
T + APE+ + D+WS+G + Y LL G PF ET +K ++ +
Sbjct: 319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 378
Query: 166 --ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVP 223
+ + + I+K+LL DP R + Q L P P + AP DS +P
Sbjct: 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-------PWLTPGN----APGRDSQIP 427
Query: 224 S 224
S
Sbjct: 428 S 428
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD--NFVVKIGD 290
L E+ + ++E E YM+Q+ +G+ ++H++ +H DLK N+ + + +K+ D
Sbjct: 241 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID 300
Query: 291 FGLAARIE 298
FGL A ++
Sbjct: 301 FGLTAHLD 308
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E+ I R H NVV +S + +++++E ++ ++ EE A +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---IATVCL 148
Query: 64 WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM------------LANKNTLCGTPNY 111
V + + Y G ++ + S ++ R+ + + + L GTP +
Sbjct: 149 SVLRALSYLHNQGVIHR-DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 112 IAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLKKP 171
+APE++++ + EVD+WS+G ++ ++ G+PP+ + RI+ L K
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKV 267
Query: 172 AATM---IKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLM 213
++ + + ML+ +P QR +LL F + P SC++
Sbjct: 268 SSVLRGFLDLMLVREPSQRATAQELLGHPFLK----LAGPPSCIV 308
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+L +SYLH+ +IHRD+K ++ L+ + +K+ DFG A++
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 191
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 105 LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL 164
L GTP Y+APEI+ G++ VD W++G ++Y + G PPF + Y +I + +
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 165 PATLKKPAATMIKKMLLLDPVQR 187
P+ +++ +L +D +R
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKR 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+R +EP RFY QI+ YLH +I+RDLK NL + +++ DFG A R++
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 103 NTLCGTPNYIAPEILNKNG----HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
+T GTP+YI+PE+L G + E D WS+G +Y +LVG PF +L TYS+I
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
+ E RFY +++ + +H IHRD+K N+ L + +K+ DFG ++ +G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 103 NTLCGTPNYIAPEILNKNG----HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
+T GTP+YI+PE+L G + E D WS+G +Y +LVG PF +L TYS+I
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
+ E RFY +++ + +H IHRD+K N+ L + +K+ DFG ++ +G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 103 NTLCGTPNYIAPEILNKNG----HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
+T GTP+YI+PE+L G + E D WS+G +Y +LVG PF +L TYS+I
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
+ E RFY +++ + +H IHRD+K N+ L + +K+ DFG ++ +G
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSRIK 158
T C TP Y+APE+L + D WS+G I Y LL G PPF + + +RI+
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIR 280
Query: 159 KVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
+Y+ P + + + +I+ +L +P QR + + + + T +P + L T
Sbjct: 281 XGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ--STKVPQTPLHT 338
Query: 215 A 215
+
Sbjct: 339 S 339
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E K I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 156 QAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLA 294
N + + E R +M Q+L G+ Y+H ++HRDLK NLF+ +++ V+KIGDFGLA
Sbjct: 110 NVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 116 ILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+L+ N ++ +D+W+ GCI +L GK F
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T R+++ Q+L G+ Y+H ++IHRDLK NL +++N +KIGDFG+A
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 47/171 (27%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDS------KFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ I + KH N++ + K VY++L+L ME DL ++
Sbjct: 103 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL------ME-----SDLHQIIH 151
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
+ + ++ Y G Y S+ V+ DL +L N+N
Sbjct: 152 SSQPLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 208
Query: 105 LCGTPN--------------YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLV 140
LC +P Y APE+ L+ + ++ +D+WS+GCI +L
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T R+++ Q+L G+ Y+H ++IHRDLK NL +++N +KIGDFG+A
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 47/176 (26%)
Query: 3 QEIAIHRSLKHRNVVGFHSF------FEDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ I + KH N++ + + K VY++L+L ME DL ++
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL------ME-----SDLHQIIH 150
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
+ + ++ Y G Y S+ V+ DL +L N+N
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207
Query: 105 LCGTPN--------------YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
LC +P Y APE+ L+ + ++ +D+WS+GCI +L + F
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 42/186 (22%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCR-------------------KRSMME 43
+EI + + L H NV+ +++ F + + I+LEL +R++ +
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 44 LYNSACD-LEEMS-------DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTR 95
+ C LE M D V + V +L D G F+ T
Sbjct: 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGV---------VKLGDLGLGRFFSSKT- 190
Query: 96 MIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYS 155
++L GTP Y++PE +++NG++F+ D+WS+GC++Y + + PF + YS
Sbjct: 191 ----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYS 245
Query: 156 RIKKVE 161
KK+E
Sbjct: 246 LCKKIE 251
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K+++ I E Y Q+ + ++H +++HRD+K N+F++ VVK+GD GL
Sbjct: 128 KQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG 183
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+T + YM L+G+ YLH H I+HRDLK NL L +N V+K+ DFGLA
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE+L + VD+W++GCI+ LL+ P + + +RI
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKN---TLCGTPNYIAPEILNKN---GHSFEVDVWSIGCI 134
L D+ V D ML + T+ GT Y+APE+ + G+SF VD WS+G
Sbjct: 147 LLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206
Query: 135 MYTLLVGKPPFE---TSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR-PPV 190
Y LL G+ P+ +++ KE + P+ + +++KK+L +P QR +
Sbjct: 207 AYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQL 266
Query: 191 AQLLHFEFFND 201
+ + +F + ND
Sbjct: 267 SDVQNFPYMND 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
E + ++ +++ + YL + +IIHRD+K N+ L ++ V I DF +AA + + Q
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 108
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 303 RK 304
+
Sbjct: 161 ER 162
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 125 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 179
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 140 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 255
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 256 PDLSKVRSNCPKAMKRLMAECLKK 279
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 7/55 (12%)
Query: 248 ETRFYMKQILE-------GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F MK++++ G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 102 ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 156
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 105 LCGTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSR- 156
L G+ ++APE++ + N +SF+ DV++ G ++Y L+ G+ P+ + E R
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Query: 157 -----IKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 230 SLSPDLSKVRSNCPKRMKRLMAECLKK 256
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 7/55 (12%)
Query: 248 ETRFYMKQILE-------GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F MK++++ G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 114 ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 105 LCGTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSR- 156
L G+ ++APE++ + N +SF+ DV++ G ++Y L+ G+ P+ + E R
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Query: 157 -----IKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMAECLKK 268
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 7/55 (12%)
Query: 248 ETRFYMKQILE-------GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F MK++++ G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 114 ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 105 LCGTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFET----STLKETYSR- 156
L G+ ++APE++ + N +SF+ DV++ G ++Y L+ G+ P+ + E R
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Query: 157 -----IKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMAECLKK 268
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + + L G
Sbjct: 141 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKK 280
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 141 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKK 280
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 118 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 172
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + + L G
Sbjct: 133 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 248
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 249 PDLSKVRSNCPKAMKRLMAECLKK 272
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
+ +EI I++ L H NVV F+ + Y+ LE C S EL++ M +P AQ
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQ 107
Query: 61 PVI-WVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANK----NTLC 106
+ V Y G ++ L D+ + +D L + N+ N +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKKVEYKL 164
GT Y+APE+L + H+ VDVWS G ++ +L G+ P++ S + YS K+ + L
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
K +A ++ K+L+ +P R + + ++N
Sbjct: 228 NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EP+ + + Q++ GV YLH I HRD+K NL L + +KI DFGLA ++ +
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 303 RK 304
+
Sbjct: 160 ER 161
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 100 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 154
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 115 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 230
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 231 PDLSKVRSNCPKAMKRLMAECLKK 254
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 103 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 118 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKK 257
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Query: 151 KETYSRIKKVE-YKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPA 209
K++ RI ++ +L A + +T I+++ LL + P + L+
Sbjct: 41 KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID-------------- 86
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
++ + R ++V F K +++ N + + + + + Y+ Q+L GV++ H H+I+
Sbjct: 87 --VIHSERCLTLVFEFMEKDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGLA 294
HRDLK NL ++ + +K+ DFGLA
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA 166
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y AP++L +S VD+WSIGCI ++ GKP F T + +I
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
+K + E E L+G++YLH H +IHRD+K GN+ LS+ +VK+GDFG A+
Sbjct: 148 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC--RKRSMMELYN---SACDLEEMSDP 57
+E+ + L+H N + + + ++++E C ++E++ ++ ++
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG 162
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEI- 116
A Q + ++ G L + V D ++A N GTP ++APE+
Sbjct: 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVI 222
Query: 117 --LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+++ + +VDVWS+G L KPP
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 103 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 118 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKK 257
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAAR 296
+ +TEP+ + +Q+LE +++LH +IIHRDLK GN+ ++ +++ DFG++A+
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 99 LANKNTLCGTPNYIAPEI-----LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKET 153
L +++ GTP ++APE+ + + ++ D+WS+G + + +PP
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Query: 154 YSRIKKVEYKLPATLKKPAA------TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+I K + P TL P+ +K L +P RP AQLL F +
Sbjct: 231 LLKIAKSD---PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + + L G
Sbjct: 113 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 168
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKK 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 113 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKK 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAAR 296
+ +TEP+ + +Q+LE +++LH +IIHRDLK GN+ ++ +++ DFG++A+
Sbjct: 104 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 99 LANKNTLCGTPNYIAPEI-----LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKET 153
L +++ GTP ++APE+ + + ++ D+WS+G + + +PP
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 222
Query: 154 YSRIKKVEYKLPATLKKPAA------TMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+I K + P TL P+ +K L +P RP AQLL F +
Sbjct: 223 LLKIAKSD---PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRDLK N+FL ++ VKIGDFGLA
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+ + R +H N++ F + + I+ + C S+ + + + ++ ++ D A Q
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANKNT----------LCG 107
++ +DY ++ ++ + DLT I LA + L G
Sbjct: 113 ----TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 108 TPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETY---------- 154
+ ++APE++ +KN +SF+ DV++ G ++Y L+ G+ P+ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 155 SRIKKVEYKLPATLKKPAATMIKK 178
+ KV P +K+ A +KK
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKK 252
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Query: 151 KETYSRIKKVE-YKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPA 209
K++ RI ++ +L A + +T I+++ LL + P + L+
Sbjct: 41 KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID-------------- 86
Query: 210 SCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKII 269
++ + R ++V F K +++ N + + + + + Y+ Q+L GV++ H H+I+
Sbjct: 87 --VIHSERCLTLVFEFMEKDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 270 HRDLKLGNLFLSDNFVVKIGDFGLA 294
HRDLK NL ++ + +K+ DFGLA
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA 166
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y AP++L +S VD+WSIGCI ++ GKP F T + +I
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 103 NTLCGTPNYIAPEILNKNG----HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK 158
+T GTP+YI+PE+L G + E D WS+G ++ +LVG PF +L TYS+I
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
Query: 159 KVEYKL----PATLKKPAATMIKKMLLLDPVQ--RPPVAQLLHFEFFND 201
+ L A + K A +I L V+ R V ++ FF +
Sbjct: 293 DHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 341
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
+ E +FY +++ + +H +IHRD+K N+ L + +K+ DFG +++ G
Sbjct: 171 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP- 165
GTP ++APE++N + SF D+WS+G I Y LL G PF ET + I + L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 166 ---ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDY 202
+ + A I K+L+ + R ++ L + +D+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL--SDNFVVKIGDFGLAAR 296
+TE +T +MKQI EG+ ++H I+H DLK N+ D +KI DFGLA R
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
+K + E E L+G++YLH H +IHRD+K GN+ LS+ +VK+GDFG A+
Sbjct: 109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC--RKRSMMELYN---SACDLEEMSDP 57
+E+ + L+H N + + + ++++E C ++E++ ++ ++
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG 123
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEI- 116
A Q + ++ G L + V D ++A N GTP ++APE+
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVI 183
Query: 117 --LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+++ + +VDVWS+G L KPP
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 248 ETRFYM-------KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
ET+F M +Q +G+ YLH IIHRD+K N+FL + VKIGDFGLA
Sbjct: 126 ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSM---MELYNSACDLEEMSDPAAQ 60
E+A+ R +H N++ F + I+ + C S+ + + + + ++ D A Q
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 61 PVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMI----MLANKNTLCGTPN------ 110
++ +DY ++ ++ + LT I + K+ G+
Sbjct: 141 ----TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 111 ---YIAPEIL---NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
++APE++ + N SF+ DV+S G ++Y L+ G+ P+
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 38/48 (79%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ ++IL G+S+LH HK+IHRD+K N+ L++N VK+ DFG++A+++
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 99 LANKNTLCGTPNYIAPEIL--NKN---GHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKE 152
+ +NT GTP ++APE++ ++N + F+ D+WS+G + G PP + ++
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA 242
Query: 153 TYSRIKKVEYKLPA-TLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ + +L + K + I+ L+ + QRP QL+ F D
Sbjct: 243 LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+QILE +SY+H IIHRDLK N+F+ ++ VKIGDFGLA +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 48/236 (20%)
Query: 4 EIAIHRSLKHRNVVGFHS-FFEDSKFV------------YIILELCRKRSMMELYNSACD 50
E+ + SL H+ VV +++ + E FV +I +E C R++ +L +S +
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-N 110
Query: 51 LEEMSDPAAQPVIWVSKWVDYSDKYGFGYQ----LN---DDSSGVMFNDLT--------- 94
L + D + + + + Y G ++ +N D+S V D
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 95 RMIMLANKN---------TLCGTPNYIAPEILNKNGHSFE-VDVWSIGCIMYTLLVGKPP 144
++ L ++N + GT Y+A E+L+ GH E +D++S+G I + ++ P
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---P 227
Query: 145 FETSTLK-ETYSRIKKVEYKLPATLKKPAATMIKKMLLL----DPVQRPPVAQLLH 195
F T + +++ V + P + KK++ L DP +RP LL+
Sbjct: 228 FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+QILE +SY+H IIHRDLK N+F+ ++ VKIGDFGLA +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFE-VDVWSIGCIMYTLLVGKPPFETSTLK-ETYSRIK 158
N + GT Y+A E+L+ GH E +D++S+G I + ++ PF T + +++
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR 242
Query: 159 KVEYKLPATLKKPAATMIKKMLLL----DPVQRPPVAQLLH 195
V + P + KK++ L DP +RP LL+
Sbjct: 243 SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 47/243 (19%)
Query: 7 IHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVIWVS 66
+++ ++N++ FFED Y++ E + S++ E A++ V V+
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNERE--ASRVVRDVA 121
Query: 67 KWVDYSDKYGFGYQL---------------------NDDSSGVMFNDLTRMIMLANKNTL 105
+D+ G ++ D SG+ N+ I T
Sbjct: 122 AALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 106 CGTPNYIAPEILN--KNGHSF---EVDVWSIGCIMYTLLVGKPPFETSTLKET------- 153
CG+ Y+APE++ + +F D+WS+G ++Y +L G PPF +
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 154 --------YSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ I++ +Y+ P A + A +I K+L+ D QR AQ+L +
Sbjct: 242 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
Query: 202 YCP 204
P
Sbjct: 302 QAP 304
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFL-SDNFV--VKIGDFGLAA 295
+++K E E ++ + + +LH I HRDLK N+ S V VKI DF L +
Sbjct: 103 QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGS 162
Query: 296 RIEFD 300
++ +
Sbjct: 163 GMKLN 167
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 107 GTPNYIAPEIL-----NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI--KK 159
GTP+YI+PEIL K + E D WS+G MY +L G+ PF +L ETY +I K
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297
Query: 160 VEYKLPAT---LKKPAATMIKKML 180
++ P + + A +I++++
Sbjct: 298 ERFQFPTQVTDVSENAKDLIRRLI 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
SK + E RFY+ +++ + +H +HRD+K N+ + N +++ DFG ++
Sbjct: 166 SKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 298 EFDG 301
DG
Sbjct: 226 MEDG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 14 RNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV-IWVSKWVDYS 72
+N VG ++YI ++LCRK ++ + N C LE+ + I +++ V++
Sbjct: 121 KNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFL 180
Query: 73 DKYG-----------------------FGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP 109
G FG D LT M A GT
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTK 240
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK-ETYSRIKKVEYKLPATL 168
Y++PE ++ N +S +VD++S+G I++ LL F T + + ++ +++ L T
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRIITDVRNLKFPLLFTQ 297
Query: 169 KKPAA-TMIKKMLLLDPVQRPPVAQLLHFEFFND 201
K P M++ ML P +RP ++ F +
Sbjct: 298 KYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRK 304
QI E V +LH ++HRDLK N+F + + VVK+GDFGL ++ D + +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 231 KPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGD 290
K ++ + + + E ++++LEG+ YLH + IHRD+K GN+ L ++ V+I D
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD 159
Query: 291 FGLAARIEFDGQRKR 305
FG++A + G R
Sbjct: 160 FGVSAFLATGGDITR 174
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 41/235 (17%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEE----MSDPA 58
+EI H N+V +++ F ++++++L S++++ E + D +
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 59 AQPVIW--VSKWVDYSDKYG-------FGYQLNDDSSGVMFNDLTRMIMLAN-------- 101
I V + ++Y K G G L + V D LA
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 102 -KNTLCGTPNYIAPEILNK-NGHSFEVDVWSIGCIMYTLLVGKPPFETS--------TLK 151
+ T GTP ++APE++ + G+ F+ D+WS G L G P+ TL+
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 236
Query: 152 ------ETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
ET + K++ K + +K MI L DP +RP A+LL +FF
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRK----MISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 231 KPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGD 290
K ++ + + + E ++++LEG+ YLH + IHRD+K GN+ L ++ V+I D
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD 164
Query: 291 FGLAARIEFDGQRKR 305
FG++A + G R
Sbjct: 165 FGVSAFLATGGDITR 179
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 91 NDLTRMIMLANKNTLCGTPNYIAPEILNK-NGHSFEVDVWSIGCIMYTLLVGKPPFETS- 148
D+TR + + T GTP ++APE++ + G+ F+ D+WS G L G P+
Sbjct: 175 GDITRNKV---RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231
Query: 149 -------TLK------ETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
TL+ ET + K++ K + +K MI L DP +RP A+LL
Sbjct: 232 PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK----MISLCLQKDPEKRPTAAELLR 287
Query: 196 FEFFN 200
+FF
Sbjct: 288 HKFFQ 292
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
R+ R +I + + +QI EG++YLH IHRDL N+ L ++ +VKIGDFGLA
Sbjct: 123 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 296 RI 297
+
Sbjct: 183 AV 184
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 99 LANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK 158
+A +N + GTP ++APE++ + G++ D+WS+G + GKPP+ I
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI---HPMRAIF 235
Query: 159 KVEYKLPATLKKPA------ATMIKKMLLLDPVQRPPVAQLLHFEF 198
+ P T +KP +K+ L+ P QR QLL F
Sbjct: 236 MIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
R K +TE E ++ L+G+ YLH + IHRD+K GN+ L+ K+ DFG+A ++
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQR 303
+ E + +++IL+G+ YLH K IHRD+K N+ LS++ VK+ DFG+A ++ D Q
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQI 179
Query: 304 KR 305
KR
Sbjct: 180 KR 181
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKV 160
+NT GTP ++APE++ ++ + + D+WS+G L G+PP E +K + K
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 240
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L KP ++ L +P RP +LL +F
Sbjct: 241 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQR 303
+ E + +++IL+G+ YLH K IHRD+K N+ LS++ VK+ DFG+A ++ D Q
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQI 174
Query: 304 KR 305
KR
Sbjct: 175 KR 176
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKV 160
+N GTP ++APE++ ++ + + D+WS+G L G+PP E +K + K
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 235
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L KP ++ L +P RP +LL +F
Sbjct: 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+K+IL+G+ YLH K IHRD+K N+ LS+ VK+ DFG+A ++ D Q KR
Sbjct: 126 LKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKR 177
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKKV 160
+NT GTP ++APE++ ++ + + D+WS+G L G+PP + ++ + K
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN 236
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L K I L DP RP +LL +F
Sbjct: 237 PPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQR 303
+ E + +++IL+G+ YLH K IHRD+K N+ LS++ VK+ DFG+A ++ D Q
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQI 159
Query: 304 KR 305
KR
Sbjct: 160 KR 161
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKV 160
+NT GTP ++APE++ ++ + + D+WS+G L G+PP E +K + K
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 220
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L KP ++ L +P RP +LL +F
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQR 303
+ E + +++IL+G+ YLH K IHRD+K N+ LS++ VK+ DFG+A ++ D Q
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQI 159
Query: 304 KR 305
KR
Sbjct: 160 KR 161
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYSRIKKV 160
+N GTP ++APE++ ++ + + D+WS+G L G+PP E +K + K
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 220
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
L KP ++ L +P RP +LL +F
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 23/116 (19%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILN--KNG---HSFEVDVW 129
+G ++NDD + + GTP+YI+PEIL ++G + E D W
Sbjct: 219 FGSCLKMNDDGT-------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 130 SIGCIMYTLLVGKPPFETSTLKETYSRIKKVE--YKLPA---TLKKPAATMIKKML 180
S+G MY +L G+ PF +L ETY +I E ++ P+ + + A +I++++
Sbjct: 266 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
SK + E RFY+ +++ + +H +HRD+K N+ L N +++ DFG ++
Sbjct: 166 SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 225
Query: 298 EFDG 301
DG
Sbjct: 226 NDDG 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 23/116 (19%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILN--KNG---HSFEVDVW 129
+G ++NDD + + GTP+YI+PEIL ++G + E D W
Sbjct: 235 FGSCLKMNDDGT-------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 130 SIGCIMYTLLVGKPPFETSTLKETYSRIKKVE--YKLPA---TLKKPAATMIKKML 180
S+G MY +L G+ PF +L ETY +I E ++ P+ + + A +I++++
Sbjct: 282 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
SK + E RFY+ +++ + +H +HRD+K N+ L N +++ DFG ++
Sbjct: 182 SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 241
Query: 298 EFDG 301
DG
Sbjct: 242 NDDG 245
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 207 LPASCLMTAPRFDSVVPSFNSPRRKP-------LMERNS-----KRRKAITEPETRFYMK 254
L A +T+PR +VP + + R P L+E S K + + E +Y+
Sbjct: 117 LMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 173
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARIEFDGQRK 304
Q LEG+ YLH +I+H D+K N+ L SD + DFG A ++ DG K
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 224
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 20/211 (9%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELY-NSACDLEEMS----D 56
++E+ L +V + + +V I +EL S+ +L C E+ +
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 173
Query: 57 PAAQPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA----NKNTLCG---- 107
A + + ++ S+ + + D L+ D S D + L K+ L G
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 108 -TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPP----FETSTLKETYSRIKKVEY 162
T ++APE++ +VDVWS C+M +L G P F + S V
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVR- 292
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQL 193
++P + A I++ L +P+ R A+L
Sbjct: 293 EIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+QILE +SY+H IIHR+LK N+F+ ++ VKIGDFGLA +
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFE-VDVWSIGCIMYTLLVGKPPFETSTLK-ETYSRIK 158
N + GT Y+A E+L+ GH E +D +S+G I + + PF T + +++
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLR 242
Query: 159 KVEYKLPATLKKPAATMIKKMLLL----DPVQRPPVAQLLH 195
V + P + KK++ L DP +RP LL+
Sbjct: 243 SVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 207 LPASCLMTAPRFDSVVPSFNSPRRKP-------LMERNS-----KRRKAITEPETRFYMK 254
L A +T+PR +VP + + R P L+E S K + + E +Y+
Sbjct: 136 LMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 192
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARIEFDGQRK 304
Q LEG+ YLH +I+H D+K N+ L SD + DFG A ++ DG K
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 243
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELY-NSACDLEEMS----D 56
++E+ L +V + + +V I +EL S+ +L C E+ +
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 192
Query: 57 PAAQPVIWV-SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLA---------NKNTLC 106
A + + ++ S+ + + D L+ D S D + L + +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPP----FETSTLKETYSRIKKVEY 162
GT ++APE++ +VDVWS C+M +L G P F + S V
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVR- 311
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQL 193
++P + A I++ L +P+ R A+L
Sbjct: 312 EIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 66/255 (25%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+EI + + LKH+N+V H K + ++ E C + ++ Y +C+ + P
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGD------LDPE 101
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------ 110
I S GF + N V+ DL +L N+N N
Sbjct: 102 IVKSFLFQLLKGLGFCHSRN-----VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156
Query: 111 ----------YIAPEIL-NKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIK 158
Y P++L +S +D+WS GCI L G+P F + + + RI
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
Query: 159 KV----------------EYK----LPAT---------LKKPAATMIKKMLLLDPVQRPP 189
++ +YK PAT L +++ +L +PVQR
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 190 VAQLLHFEFFNDYCP 204
+ L +F+D+CP
Sbjct: 277 AEEALQHPYFSDFCP 291
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 246 EPE-TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+PE + ++ Q+L+G+ + H ++HRDLK NL ++ N +K+ +FGLA
Sbjct: 99 DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+S+ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEIL +S VD+WS+GCI ++ + F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPP-FETSTLKETYSRIKK 159
+N GTP ++APE++ ++ + F+ D+WS+G L G+PP + ++ + K
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 231
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYC 203
L KP ++ L DP RP +LL +F Y
Sbjct: 232 SPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 275
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
+++IL+G+ YLH + IHRD+K N+ LS+ VK+ DFG+A ++ D Q KR
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKR 173
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
R+ R +I + + +QI EG++YLH IHR+L N+ L ++ +VKIGDFGLA
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 296 RI 297
+
Sbjct: 166 AV 167
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKXQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDXELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
EP FY QI+ G+ +LH II+RDLK N+ L D+ V+I D GLA ++ GQ
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQ 343
Query: 303 RK 304
K
Sbjct: 344 TK 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNT----LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMY 136
L DD V +DL + L T GTP ++APE+L + F VD +++G +Y
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 137 TLLVGKPPF----ETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ + PF E KE R+ + P + + +L DP +R
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
R+ R +I + + +QI EG++YLH IHR+L N+ L ++ +VKIGDFGLA
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 296 RI 297
+
Sbjct: 166 AV 167
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
EP FY QI+ G+ +LH II+RDLK N+ L D+ V+I D GLA ++ GQ
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQ 343
Query: 303 RK 304
K
Sbjct: 344 TK 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNT----LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMY 136
L DD V +DL + L T GTP ++APE+L + F VD +++G +Y
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 137 TLLVGKPPF----ETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ + PF E KE R+ + P + + +L DP +R
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
EP FY QI+ G+ +LH II+RDLK N+ L D+ V+I D GLA ++ GQ
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQ 343
Query: 303 RK 304
K
Sbjct: 344 TK 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNT----LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMY 136
L DD V +DL + L T GTP ++APE+L + F VD +++G +Y
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 137 TLLVGKPPF----ETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ + PF E KE R+ + P + + +L DP +R
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
EP FY QI+ G+ +LH II+RDLK N+ L D+ V+I D GLA ++ GQ
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQ 343
Query: 303 RK 304
K
Sbjct: 344 TK 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 81 LNDDSSGVMFNDLTRMIMLANKNT----LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMY 136
L DD V +DL + L T GTP ++APE+L + F VD +++G +Y
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 137 TLLVGKPPF----ETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQR 187
++ + PF E KE R+ + P + + +L DP +R
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKXQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEIL +S VD+WS+GCI ++ + F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYN-SACDLEEMSDPAA 59
+ +EI+I +HRN++ H FE + + +I E + E N SA +L E
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE--REIV 105
Query: 60 QPVIWVSKWVDYSDKYGFG----------YQLNDDSSG--VMFNDLTRMIMLANKNTLCG 107
V V + + + + G YQ S+ + F ++ N L
Sbjct: 106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT 165
Query: 108 TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
P Y APE+ + S D+WS+G ++Y LL G PF T ++ I EY
Sbjct: 166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY 220
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD--NFVVKIGD 290
+ ER + + E E Y+ Q+ E + +LH H I H D++ N+ + +KI +
Sbjct: 88 IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147
Query: 291 FGLAARIE 298
FG A +++
Sbjct: 148 FGQARQLK 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEIL +S VD+WS+GCI ++ + F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEIL +S VD+WS+GCI ++ + F
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
I P + Y+ Q+L+G+++ H H+++HRDLK NL ++ +K+ DFGLA
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL +S VD+WS+GCI ++ + F + + RI
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 207 LPASCLMTAPRFDSVVPSFNSPRRKP-------LMERNS-----KRRKAITEPETRFYMK 254
L A +++PR +VP + + R P L+E S K+ + E +Y+
Sbjct: 115 LVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 171
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARIEFDGQRK 304
Q LEG+ YLH +I+H D+K N+ L SD + DFG A ++ DG K
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 222
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
GT ++APE++ +VD+WS C+M +L G P+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 207 LPASCLMTAPRFDSVVPSFNSPRRKP-------LMERNS-----KRRKAITEPETRFYMK 254
L A +++PR +VP + + R P L+E S K+ + E +Y+
Sbjct: 117 LVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 173
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARIEFDGQRK 304
Q LEG+ YLH +I+H D+K N+ L SD + DFG A ++ DG K
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 224
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
GT ++APE++ +VD+WS C+M +L G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 207 LPASCLMTAPRFDSVVPSFNSPRRKP-------LMERNS-----KRRKAITEPETRFYMK 254
L A +++PR +VP + + R P L+E S K+ + E +Y+
Sbjct: 101 LVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 157
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARIEFDGQRK 304
Q LEG+ YLH +I+H D+K N+ L SD + DFG A ++ DG K
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
GT ++APE++ +VD+WS C+M +L G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 54/248 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + LKH NV+G F ED VY++ L M N+ + +SD
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL-----MGADLNNIVKCQALSD 130
Query: 57 PAAQPVIW-VSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML---------ANKNTLC 106
Q +++ + + + Y G ++ + S V N+ + + +L
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHR-DLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 107 GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV----- 160
T Y APEI LN ++ VD+WS+GCIM LL GK F S + RI +V
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 161 ---------EY------KLPATLKKP-----------AATMIKKMLLLDPVQRPPVAQLL 194
E+ LP +K A ++ +ML+LD QR A+ L
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 195 HFEFFNDY 202
+F+ Y
Sbjct: 310 AHAYFSQY 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+A+++ +F + Q+L G+ Y+H IIHRDLK N+ ++++ ++I DFGLA
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 129
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 130 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 300 KRITAAQALAHAYFAQY 316
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 129
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 130 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 300 KRITAAQALAHAYFAQY 316
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 135
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 136 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 306 KRITAAQALAHAYFAQY 322
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 153
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 154 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 203
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
Query: 157 IKKVEYKLPATL--KKP-----------------------------AATMIKKMLLLDPV 185
I ++ PA++ + P A +++KML+LD
Sbjct: 264 IMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTD 323
Query: 186 QRPPVAQLLHFEFFNDY 202
+R ++ L +F+ Y
Sbjct: 324 KRITASEALAHPYFSQY 340
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 39/221 (17%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNS-ACDLEEMSDPAA 59
+ EI+I L H ++ H FED + +ILE S EL++ A + +MS+
Sbjct: 95 VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL---SGGELFDRIAAEDYKMSE--- 148
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT--------------- 104
++ ++Y + G + + S V + IM K
Sbjct: 149 ------AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
Query: 105 -------LCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
T + APEI+++ F D+W+IG + Y LL G PF ET +
Sbjct: 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262
Query: 158 KKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
K+ +++ +++ A IK +L +P +R V L
Sbjct: 263 KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV--VKIGD 290
L +R + ++E E YM+Q EG+ ++H+H I+H D+K N+ VKI D
Sbjct: 135 LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 194
Query: 291 FGLAARIEFD 300
FGLA ++ D
Sbjct: 195 FGLATKLNPD 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 97/248 (39%), Gaps = 54/248 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 131
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT-LC 106
Q +I+ S + + D +N+D + D A++ T
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL-DFGLARHTADEMTGYV 190
Query: 107 GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 166 ATLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLL 194
A L K A +++KML+LD +R AQ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 195 HFEFFNDY 202
+F Y
Sbjct: 311 AHAYFAQY 318
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 97/248 (39%), Gaps = 54/248 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 131
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT-LC 106
Q +I+ S + + D +N+D + D A++ T
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL-DFGLARHTADEMTGYV 190
Query: 107 GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 166 ATLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLL 194
A L K A +++KML+LD +R AQ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 195 HFEFFNDY 202
+F Y
Sbjct: 311 AHAYFAQY 318
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 54/248 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + LKH NV+G F ED VY++ L M N+ + +SD
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL-----MGADLNNIVKSQALSD 130
Query: 57 PAAQPVIW-VSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML---------ANKNTLC 106
Q +++ + + + Y G ++ + S V N+ + + +L
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHR-DLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 107 GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV----- 160
T Y APEI LN ++ VD+WS+GCIM LL GK F S + RI +V
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 161 ---------EY------KLPATLKKP-----------AATMIKKMLLLDPVQRPPVAQLL 194
E+ LP +K A ++ +ML+LD QR A+ L
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 195 HFEFFNDY 202
+F+ Y
Sbjct: 310 AHAYFSQY 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + +A+++ +F + Q+L G+ Y+H IIHRDLK N+ ++++ ++I DFGLA
Sbjct: 121 NIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 52/247 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + LKH NV+G F ED VY++ L M N+ + +SD
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL-----MGADLNNIVKCQALSD 122
Query: 57 PAAQPVIW-VSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM---LANK-----NTLCG 107
Q +++ + + + Y G ++ S+ + D I+ LA +
Sbjct: 123 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA 182
Query: 108 TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE----- 161
T Y APEI LN ++ VD+WS+GCIM LL GK F S + RI +V
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 242
Query: 162 ---------------YKLPATLKKP-----------AATMIKKMLLLDPVQRPPVAQLLH 195
LP +K A ++ +ML+LD QR A+ L
Sbjct: 243 EVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 302
Query: 196 FEFFNDY 202
+F+ Y
Sbjct: 303 HAYFSQY 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+A+++ +F + Q+L G+ Y+H IIHRDLK N+ ++++ ++I DFGLA
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 97/248 (39%), Gaps = 54/248 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 131
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT-LC 106
Q +I+ S + + D +N+D + D A++ T
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL-DFGLARHTADEMTGYV 190
Query: 107 GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 166 ATLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLL 194
A L K A +++KML+LD +R AQ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 195 HFEFFNDY 202
+F Y
Sbjct: 311 AHAYFAQY 318
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 126
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 127 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 297 KRITAAQALAHAYFAQY 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 129
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 130 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 300 KRITAAQALAHAYFAQY 316
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 131 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 301 KRITAAQALAHAYFAQY 317
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 131
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 132 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 182 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 302 KRITAAQALAHAYFAQY 318
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 129
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 130 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 300 KRITAAQALAHAYFAQY 316
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 134
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 135 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 184
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 185 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 245 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 304
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 305 KRITAAQALAHAYFAQY 321
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 123
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 124 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 174 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 234 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 293
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 294 KRITAAQALAHAYFAQY 310
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 126
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 127 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 297 KRITAAQALAHAYFAQY 313
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 136
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 137 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 307 KRITAAQALAHAYFAQY 323
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 121
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 122 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 292 KRITAAQALAHAYFAQY 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 52/247 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 126
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCG 107
Q +I+ S + + D +N+DS + +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 108 TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++ A
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 167 TLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLLH 195
L K A +++KML+LD +R AQ L
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 306
Query: 196 FEFFNDY 202
+F Y
Sbjct: 307 HAYFAQY 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 111 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 120
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 121 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 291 KRITAAQALAHAYFAQY 307
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 136
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 137 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 307 KRITAAQALAHAYFAQY 323
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 48/248 (19%)
Query: 7 IHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVIWVS 66
+++ HRNV+ FFE+ Y++ E R S++ + E+ A+ V V+
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE--ASVVVQDVA 121
Query: 67 KWVDYSDKYGFGY--------------QLN-------DDSSGVMFNDLTRMIMLANKNTL 105
+D+ G + Q++ D SG+ N I T
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP 181
Query: 106 CGTPNYIAPEILNKNGHSFEV-----DVWSIGCIMYTLLVGKPPFETSTLKET------- 153
CG+ Y+APE++ + D+WS+G I+Y LL G PPF +
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 154 --------YSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ I++ +Y+ P A + A +I K+L+ D QR AQ+L +
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
Query: 202 YCP-TSLP 208
P +LP
Sbjct: 302 CAPENTLP 309
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD-NFV--VKIGDFGLAAR 296
+R+ E E ++ + + +LH+ I HRDLK N+ N V VKI DF L +
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163
Query: 297 IEFDG 301
I+ +G
Sbjct: 164 IKLNG 168
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 121
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 122 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 292 KRITAAQALAHAYFAQY 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 147
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 148 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 198 TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 318 KRITAAQALAHAYFAQY 334
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 144
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 145 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 315 KRITAAQALAHAYFAQY 331
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 136
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 137 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 307 KRITAAQALAHAYFAQY 323
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 126
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 127 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 297 KRITAAQALAHAYFAQY 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 135 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 144
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 145 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 315 KRITAAQALAHAYFAQY 331
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 135
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 136 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 306 KRITAAQALAHAYFAQY 322
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 147
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 148 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 198 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 318 KRITAAQALAHAYFAQY 334
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 111 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 120
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 121 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 291 KRITAAQALAHAYFAQY 307
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 52/247 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 130
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCG 107
Q +I+ S + + D +N+DS + +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 108 TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++ A
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 167 TLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLLH 195
L K A +++KML+LD +R AQ L
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 310
Query: 196 FEFFNDY 202
+F Y
Sbjct: 311 HAYFAQY 317
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 144
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 145 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 195 TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 315 KRITAAQALAHAYFAQY 331
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 111 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 120
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 121 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 171 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 291 KRITAAQALAHAYFAQY 307
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 143
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 144 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 314 KRITAAQALAHAYFAQY 330
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 113 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 122
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 123 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 173 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 233 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 292
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 293 KRITAAQALAHAYFAQY 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 134 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 143
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 144 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 314 KRITAAQALAHAYFAQY 330
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 131 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 301 KRITAAQALAHAYFAQY 317
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 131 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 301 KRITAAQALAHAYFAQY 317
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + + E +F + Q+L+G+ Y+H IIHRDLK GNL ++++ +KI DFGLA
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 32/152 (21%)
Query: 111 YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETS----TLKET-----------Y 154
Y APE ILN ++ VD+WS+GCIM ++ GK F+ S LKE
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 155 SRIKKVEYK-----LPATLKKP-----------AATMIKKMLLLDPVQRPPVAQLLHFEF 198
R++ E K LP KK A +++KML+LD QR + L +
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310
Query: 199 FNDYCPTSLPASCLMTAPRFDSVVPSFNSPRR 230
F T FD V + + +R
Sbjct: 311 FESLHDTEDEPQVQKYDDSFDDVDRTLDEWKR 342
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGLA
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 94/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ +++D
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCAKLTD 120
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 121 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 291 KRITAAQALAHAYFAQY 307
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 18/124 (14%)
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRK 231
A +++LLL +Q V LL + F PAS L F V+P + +K
Sbjct: 85 AKRAYRELLLLKHMQHENVIGLL--DVFT-------PASSLRNFYDFYLVMPFMQTDLQK 135
Query: 232 PL-MERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGD 290
+ ME +E + ++ + Q+L+G+ Y+H ++HRDLK GNL ++++ +KI D
Sbjct: 136 IMGME--------FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILD 187
Query: 291 FGLA 294
FGLA
Sbjct: 188 FGLA 191
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 32/124 (25%)
Query: 111 YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-------- 161
Y APE IL+ ++ VD+WS+GCIM +L GK F+ + ++I KV
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266
Query: 162 ------------YKLPATLKK-----------PAATMIKKMLLLDPVQRPPVAQLLHFEF 198
LP T +K AA +++KML LD +R AQ L F
Sbjct: 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326
Query: 199 FNDY 202
F +
Sbjct: 327 FEPF 330
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
EI + R K+ N+V + + +++++E S+ ++ C E + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML----ANKNTLCGTPNYIAP 114
S V + D L D S V D + + ++T+ GTP ++AP
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETY--SRIKKVEYKLPATLKKP 171
E++ + + +VD+WS+G + ++ G+PP+ + L+ Y + E + P L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ + L +D +R +LL +F P S
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ L+ + +LH +++IHRD+K N+ L + VK+ DFG A+I
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 25/101 (24%)
Query: 202 YCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVS 261
Y ASCL P P + P+R+ + +++ G++
Sbjct: 108 YMANGSVASCLRERPESQ---PPLDWPKRQRIALGSAR-------------------GLA 145
Query: 262 YLHDH---KIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
YLHDH KIIHRD+K N+ L + F +GDFGLA +++
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTL 150
G +IAPE L+ S + DV+ G ++ L+ G+ F+ + L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ Q+L+G+++ H++KI+HRDLK NL ++ +K+GDFGLA
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
Y AP++L +S +D+WS GCI+ ++ GKP F + +E K+ + + T
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL----KLIFDIMGTPN 229
Query: 170 KPAATMIKKMLLLDP--VQRPP 189
+ + K+ +P QRPP
Sbjct: 230 ESLWPSVTKLPKYNPNIQQRPP 251
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
R+ R + + + +QI EG++YLH IHR L N+ L ++ +VKIGDFGLA
Sbjct: 101 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
Query: 296 RI 297
+
Sbjct: 161 AV 162
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 16/123 (13%)
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRK 231
A +++LLL +Q V LL + F PAS L F V+P + +K
Sbjct: 67 AKRAYRELLLLKHMQHENVIGLL--DVFT-------PASSLRNFYDFYLVMPFMQTDLQK 117
Query: 232 PLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDF 291
+ + +E + ++ + Q+L+G+ Y+H ++HRDLK GNL ++++ +KI DF
Sbjct: 118 IMGLK-------FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 170
Query: 292 GLA 294
GLA
Sbjct: 171 GLA 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 32/124 (25%)
Query: 111 YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVE-------- 161
Y APE IL+ ++ VD+WS+GCIM +L GK F+ + ++I KV
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248
Query: 162 ------------YKLPATLKK-----------PAATMIKKMLLLDPVQRPPVAQLLHFEF 198
LP T +K AA +++KML LD +R AQ L F
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308
Query: 199 FNDY 202
F +
Sbjct: 309 FEPF 312
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 236 RNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
R+ R + + + +QI EG++YLH IHR L N+ L ++ +VKIGDFGLA
Sbjct: 100 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
Query: 296 RI 297
+
Sbjct: 160 AV 161
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 25/101 (24%)
Query: 202 YCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVS 261
Y ASCL P P + P+R+ + +++ G++
Sbjct: 116 YMANGSVASCLRERPESQ---PPLDWPKRQRIALGSAR-------------------GLA 153
Query: 262 YLHDH---KIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
YLHDH KIIHRD+K N+ L + F +GDFGLA +++
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTL 150
GT +IAPE L+ S + DV+ G ++ L+ G+ F+ + L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DFGL
Sbjct: 115 NIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKSQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT--------LC-- 106
Q +I Y G Y S+ ++ DL + N+++ LC
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 107 ---------GTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
T E + M+ +L G+ Y+H +KI+HRD+K N+ ++ + V+K+ DFGLA
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK------------------ 151
Y PE+L + + +D+W GCIM + P + +T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 152 ------ETYSRI-------KKVEYKLPATLKKP-AATMIKKMLLLDPVQRPPVAQLLHFE 197
E Y ++ +KV+ +L A ++ P A +I K+L+LDP QR L+ +
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 198 FF-NDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKP---LMERNSKRRKAITEPETRF 251
FF +D P+ L M + S+ PRRK + ++ R T +T F
Sbjct: 315 FFWSDPMPSDLKG---MLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNPATTNQTEF 369
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
T E + M+ +L G+ Y+H +KI+HRD+K N+ ++ + V+K+ DFGLA
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 34/131 (25%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK------------------ 151
Y PE+L + + +D+W GCIM + P + +T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 152 ------ETYSRI-------KKVEYKLPATLKKP-AATMIKKMLLLDPVQRPPVAQLLHFE 197
E Y ++ +KV+ +L A ++ P A +I K+L+LDP QR L+ +
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 198 FF-NDYCPTSL 207
FF +D P+ L
Sbjct: 315 FFWSDPMPSDL 325
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
T E + M+ +L G+ Y+H +KI+HRD+K N+ ++ + V+K+ DFGLA
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 37/155 (23%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK------------------ 151
Y PE+L + + +D+W GCIM + P + +T +
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 152 ------ETYSRI-------KKVEYKLPATLKKP-AATMIKKMLLLDPVQRPPVAQLLHFE 197
E Y ++ +KV+ +L A ++ P A +I K+L+LDP QR L+ +
Sbjct: 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 198 FF-NDYCPTSLPASCLMTAPRFDSVVPSFNSPRRK 231
FF +D P+ L M + S+ PRRK
Sbjct: 314 FFWSDPMPSDLKG---MLSTHLTSMFEYLAPPRRK 345
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
T E + M+ +L G+ Y+H +KI+HRD+K N+ ++ + V+K+ DFGLA
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 34/131 (25%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK------------------ 151
Y PE+L + + +D+W GCIM + P + +T +
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 152 ------ETYSRI-------KKVEYKLPATLKKP-AATMIKKMLLLDPVQRPPVAQLLHFE 197
E Y ++ +KV+ +L A ++ P A +I K+L+LDP QR L+ +
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 198 FF-NDYCPTSL 207
FF +D P+ L
Sbjct: 315 FFWSDPMPSDL 325
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI D+GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 86/264 (32%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVS----KWVDYSD----------------------KYGFGYQLNDDSSGVMF 90
Q +I+ K++ +D YG +D+ +G +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV- 183
Query: 91 NDLTRMIMLANKNTLCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETST 149
T Y APEI LN ++ VD+WS+GCIM LL G+ F +
Sbjct: 184 ----------------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
Query: 150 LKETYSRIKKVEYKLPATLKKP-------------------------------AATMIKK 178
+ I ++ A L K A +++K
Sbjct: 228 HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 287
Query: 179 MLLLDPVQRPPVAQLLHFEFFNDY 202
ML+LD +R AQ L +F Y
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 66/255 (25%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+EI + + LKH+N+V H K + ++ E C + ++ Y +C+ + P
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGD------LDPE 101
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT-----------LCGTPN- 110
I S GF + N V+ DL +L N+N G P
Sbjct: 102 IVKSFLFQLLKGLGFCHSRN-----VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156
Query: 111 ----------YIAPEIL-NKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIK 158
Y P++L +S +D+WS GCI L +P F + + + RI
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIF 216
Query: 159 KV----------------EYK----LPAT---------LKKPAATMIKKMLLLDPVQRPP 189
++ +YK PAT L +++ +L +PVQR
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 190 VAQLLHFEFFNDYCP 204
+ L +F+D+CP
Sbjct: 277 AEEALQHPYFSDFCP 291
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 246 EPE-TRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+PE + ++ Q+L+G+ + H ++HRDLK NL ++ N +K+ DFGLA
Sbjct: 99 DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 108 TPNYIAPEILNKNGHSF---EVDVWSIGCIMYTLLVGKPPFETSTLK-ETYSRIKKVEYK 163
T +Y APE+ + H DVWS+GC++Y ++ G+ P++ K ++ + + +
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 164 LPATLKKPAA--TMIKKMLLLDPVQRPPVAQLL 194
+P + + +A ++ M+ +DP QRP + LL
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 234 MERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ER + +TE + + + I G+ +H HRDLK N+ L D + D G
Sbjct: 121 IERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS 180
Query: 294 --AARIEFDGQRK 304
A I +G R+
Sbjct: 181 MNQACIHVEGSRQ 193
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLE----EMSDPAA 59
E + + L+H+ +V ++ +YII E S+++ + ++ ++ D AA
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGTP- 109
Q +++ + + ++ + ++ L D+ D L R+I A G
Sbjct: 117 Q----IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF 172
Query: 110 --NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 169
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 161
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
Y+ QI+ G+ + H H IIHRD+K N+ +S + VVK+ DFG A + G+
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 32/126 (25%)
Query: 107 GTPNYIAPEILNKN-GHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETYS--------- 155
T Y APE+L + + VDVW+IGC++ + +G+P F S + + Y
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 156 ----------------RIKKVEYKLPATLKKPAAT-----MIKKMLLLDPVQRPPVAQLL 194
R+ +++ + P + P + + KK L +DP +RP A+LL
Sbjct: 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
Query: 195 HFEFFN 200
H +FF
Sbjct: 306 HHDFFQ 311
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M Q+L G+ +LH H+++HRDLK N+ ++ + +K+ DFGLA
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
Y APE+L ++ ++ VD+WS+GCI + KP F S+ + +I V
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M Q+L G+ +LH H+++HRDLK N+ ++ + +K+ DFGLA
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
Y APE+L ++ ++ VD+WS+GCI + KP F S+ + +I V
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 230 RKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIG 289
R L + +R I+ +++M IL G+ LH+ ++HRDL GN+ L+DN + I
Sbjct: 117 RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176
Query: 290 DFGLAARIEFDGQR 303
DF LA D +
Sbjct: 177 DFNLAREDTADANK 190
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 82 NDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNK-NGHSFEVDVWSIGCIMYTLLV 140
N+D + FN ANK Y APE++ + G + VD+WS GC+M +
Sbjct: 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 141 GKPPFETSTLKETYSRIKKV 160
K F ST ++I +V
Sbjct: 230 RKALFRGSTFYNQLNKIVEV 249
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M Q+L G+ +LH H+++HRDLK N+ ++ + +K+ DFGLA
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
Y APE+L ++ ++ VD+WS+GCI + KP F S+ + +I V
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHRDL+ N+ +SD KI DFGLA IE
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 230 RKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIG 289
R L + +R I+ +++M IL G+ LH+ ++HRDL GN+ L+DN + I
Sbjct: 117 RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176
Query: 290 DFGLAARIEFDGQR 303
DF LA D +
Sbjct: 177 DFNLAREDTADANK 190
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 82 NDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNK-NGHSFEVDVWSIGCIMYTLLV 140
N+D + FN ANK Y APE++ + G + VD+WS GC+M +
Sbjct: 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 141 GKPPFETSTLKETYSRIKKV 160
K F ST ++I +V
Sbjct: 230 RKALFRGSTFYNQLNKIVEV 249
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+Q+ G++YL + K +HRDL N + +N VVKI DFGL+ I
Sbjct: 181 RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 198 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------EYKLPATLKKPAATM 175
DVWS+GCI+Y + GK PF+ + ++I K+ E + P +K +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 176 IKKMLLLDPVQRPPVAQLL 194
+K L DP QR + +LL
Sbjct: 301 LKCCLKRDPKQRISIPELL 319
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 205
Query: 299 FD 300
D
Sbjct: 206 PD 207
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 48/248 (19%)
Query: 7 IHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVIWVS 66
+++ HRNV+ FFE+ Y++ E R S++ + E+ A+ V V+
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE--ASVVVQDVA 121
Query: 67 KWVDYSDKYGFGYQ-LNDDS--------------------SGVMFNDLTRMIMLANKNTL 105
+D+ G ++ L ++ SG+ N I T
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP 181
Query: 106 CGTPNYIAPEILNKNGHSFEV-----DVWSIGCIMYTLLVGKPPFETSTLKET------- 153
CG+ Y+APE++ + D+WS+G I+Y LL G PPF +
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 154 --------YSRIKKVEYKLP----ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ I++ +Y+ P A + A +I K+L+ D QR AQ+L +
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
Query: 202 YCP-TSLP 208
P +LP
Sbjct: 302 CAPENTLP 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD-NFV--VKIGDFGLAAR 296
+R+ E E ++ + + +LH+ I HRDLK N+ N V VKI DFGL +
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSG 163
Query: 297 IEFDG 301
I+ +G
Sbjct: 164 IKLNG 168
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 240 RRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
R + EP + +Q++ V YL IIHRD+K N+ ++++F +K+ DFG AA +E
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQ 60
++ EIAI ++H N++ FE+ F +++E + S ++L+ + +P A
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 61 PVI-WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT-RMIMLANKN---------TLCGTP 109
+ + V Y ++ D + V+ D T ++I + T CGT
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 110 NYIAPEILNKNGHSF-EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKL--PA 166
Y APE+L N + E+++WS+G +YTL+ + PF L+ET VE + P
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--CELEET------VEAAIHPPY 245
Query: 167 TLKKPAATMIKKMLLLDPVQRPPVAQLL 194
+ K +++ +L P +R + +L+
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKLV 273
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 103 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 161
Query: 299 FD 300
D
Sbjct: 162 PD 163
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 30/136 (22%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 154 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 201
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV-----EYKLPATLKKPAATMIKK 178
DVWS+GCI+Y + GK PF+ + S++ + E + P +K ++K
Sbjct: 202 PKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC 259
Query: 179 MLLLDPVQRPPVAQLL 194
L DP QR + +LL
Sbjct: 260 CLKRDPKQRISIPELL 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
EI + R K+ N+V + + +++++E S+ ++ C E + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML----ANKNTLCGTPNYIAP 114
S V + D L D S V D + + ++ + GTP ++AP
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETY--SRIKKVEYKLPATLKKP 171
E++ + + +VD+WS+G + ++ G+PP+ + L+ Y + E + P L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ + L +D +R +LL +F P S
Sbjct: 246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ L+ + +LH +++IHRD+K N+ L + VK+ DFG A+I
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 177
Query: 299 FD 300
D
Sbjct: 178 PD 179
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 170 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------EYKLPATLKKPAATM 175
DVWS+GCI+Y + GK PF+ + ++I K+ E + P +K +
Sbjct: 218 PKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 272
Query: 176 IKKMLLLDPVQRPPVAQLL 194
+K L DP QR + +LL
Sbjct: 273 LKCCLKRDPKQRISIPELL 291
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 100 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 158
Query: 299 FD 300
D
Sbjct: 159 PD 160
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 151 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------EYKLPATLKKPAATM 175
DVWS+GCI+Y + GK PF+ + ++I K+ E + P +K +
Sbjct: 199 PKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 176 IKKMLLLDPVQRPPVAQLL 194
+K L DP QR + +LL
Sbjct: 254 LKCCLKRDPKQRISIPELL 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 99 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 157
Query: 299 FD 300
D
Sbjct: 158 PD 159
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 30/136 (22%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 150 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 197
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV-----EYKLPATLKKPAATMIKK 178
DVWS+GCI+Y + GK PF+ + S++ + E + P +K ++K
Sbjct: 198 PKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC 255
Query: 179 MLLLDPVQRPPVAQLL 194
L DP QR + +LL
Sbjct: 256 CLKRDPKQRISIPELL 271
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 177
Query: 299 FD 300
D
Sbjct: 178 PD 179
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 102 KNTLCGTPNYIAPEILNKNGHSFE-----------VDVWSIGCIMYTLLVGKPPFETSTL 150
K++ GT NY+ PE + S E DVWS+GCI+Y + GK PF+ +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QI 242
Query: 151 KETYSRIKKV-----EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
S++ + E + P +K ++K L DP QR + +LL
Sbjct: 243 INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ GT NY+ PE + S E
Sbjct: 198 FGIANQMQPDTTSVV------------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------EYKLPATLKKPAATM 175
DVWS+GCI+Y + GK PF+ + ++I K+ E + P +K +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 176 IKKMLLLDPVQRPPVAQLL 194
+K L DP QR + +LL
Sbjct: 301 LKCCLKRDPKQRISIPELL 319
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 205
Query: 299 FD 300
D
Sbjct: 206 PD 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ QI EG++++ IHRDL+ N+ +S + V KI DFGLA IE
Sbjct: 116 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 162
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 37/186 (19%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E + ++L+H +V H+ +YII E K S+++ S + + QP+
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKS-------DEGSKQPL- 110
Query: 64 WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------- 110
K +D+S + G + + + DL +L + + +C +
Sbjct: 111 --PKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 167
Query: 111 ----------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ + E +++
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
Query: 160 VEYKLP 165
Y++P
Sbjct: 228 -GYRMP 232
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
K++K+I E + Y K +LE V +H H I+H DLK N + D ++K+ DFG+A +++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQ 205
Query: 299 FD 300
D
Sbjct: 206 PD 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 36/139 (25%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKNGHSFE--------- 125
+G Q+ D++ V+ K++ G NY+ PE + S E
Sbjct: 198 FGIANQMQPDTTSVV------------KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 126 --VDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------EYKLPATLKKPAATM 175
DVWS+GCI+Y + GK PF+ + ++I K+ E + P +K +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 176 IKKMLLLDPVQRPPVAQLL 194
+K L DP QR + +LL
Sbjct: 301 LKCCLKRDPKQRISIPELL 319
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ IT + Y Q+ G+ +L K IHRDL N+ LS+N VVKI DFGLA I
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYS-------RIKKVEY 162
++APE + +S + DVWS G +++ + +G P+ + E + R++ EY
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEY 326
Query: 163 KLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
P + ++ DP +RP A+L+
Sbjct: 327 STPEIYQ-----IMLDCWHRDPKERPRFAELVE 354
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++Y+ IHRDL+ N+ +S++ + KI DFGLA IE
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 161
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 79/187 (42%), Gaps = 36/187 (19%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E + ++L+H +V ++ + +YII E K S+++ S D +
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKS--------DEGGK-- 106
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------ 110
+ + K +D+S + G + + + DL +L +++ +C +
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
Query: 111 -----------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIK 158
+ APE +N + + DVWS G ++Y ++ GK P+ T + + +
Sbjct: 166 TAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
Query: 159 KVEYKLP 165
+ Y++P
Sbjct: 226 Q-GYRMP 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++Y+ IHRDL+ N+ +S++ + KI DFGLA IE
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 160
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 79/187 (42%), Gaps = 36/187 (19%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E + ++L+H +V ++ + +YII E K S+++ S D +
Sbjct: 56 EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS--------DEGGK-- 105
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------ 110
+ + K +D+S + G + + + DL +L +++ +C +
Sbjct: 106 VLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 164
Query: 111 -----------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIK 158
+ APE +N + + +VWS G ++Y ++ GK P+ T + S +
Sbjct: 165 TAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALS 224
Query: 159 KVEYKLP 165
+ Y++P
Sbjct: 225 Q-GYRMP 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
++ Q+L G++Y HD +++HRDLK NL ++ +KI DFGLA
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 30/121 (24%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------- 160
Y AP++L +S +D+WS+GCI ++ G P F + + RI ++
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 161 -------EYKLPATLKKP-------------AATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+Y T+ +P ++ KML LDP QR Q L +F
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
Query: 201 D 201
+
Sbjct: 286 E 286
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETY--SR 156
+ ++T+ GTP ++APE++ + + +VD+WS+G + ++ G+PP+ + L+ Y +
Sbjct: 172 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 231
Query: 157 IKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
E + P L + + L +D +R +L+ +F P S
Sbjct: 232 NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLS 281
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ L+ + +LH +++IHR++K N+ L + VK+ DFG A+I
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI 167
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
EI + R K+ N+V + + +++++E S+ ++ C E + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML----ANKNTLCGTPNYIAP 114
S V + D L D S V D + + ++ + GTP ++AP
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETY--SRIKKVEYKLPATLKKP 171
E++ + + +VD+WS+G + ++ G+PP+ + L+ Y + E + P L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ + L +D +R +LL +F P S
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ L+ + +LH +++IHRD+K N+ L + VK+ DFG A+I
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
++ Q+L G++Y HD +++HRDLK NL ++ +KI DFGLA
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 30/121 (24%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------- 160
Y AP++L +S +D+WS+GCI ++ G P F + + RI ++
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 161 -------EYKLPATLKKP-------------AATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+Y T+ +P ++ KML LDP QR Q L +F
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
Query: 201 D 201
+
Sbjct: 286 E 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
++ Q+L G++Y HD +++HRDLK NL ++ +KI DFGLA
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 30/121 (24%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV--------- 160
Y AP++L +S +D+WS+GCI ++ G P F + + RI ++
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 161 -------EYKLPATLKKP-------------AATMIKKMLLLDPVQRPPVAQLLHFEFFN 200
+Y T+ +P ++ KML LDP QR Q L +F
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
Query: 201 D 201
+
Sbjct: 286 E 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ QI EG++++ IHRDL+ N+ +S + V KI DFGLA IE
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 37/186 (19%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E + ++L+H +V H+ +YII E K S+++ S + + QP+
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKS-------DEGSKQPL- 283
Query: 64 WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------- 110
K +D+S + G + + + DL +L + + +C +
Sbjct: 284 --PKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
Query: 111 ----------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ + E +++
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
Query: 160 VEYKLP 165
Y++P
Sbjct: 401 -GYRMP 405
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 237 NSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
N + + +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI FGLA
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 97/254 (38%), Gaps = 66/254 (25%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDD-------SSGVMFNDLTRMIMLA------NKN 103
Q +I Y G Y + D S + N+ + +L +
Sbjct: 125 DHVQFLI-------YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 104 TLCG---TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
+ G T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I +
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 160 VEYKLPATLKKP-------------------------------AATMIKKMLLLDPVQRP 188
+ A L K A +++KML+LD +R
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 189 PVAQLLHFEFFNDY 202
AQ L +F Y
Sbjct: 298 TAAQALAHAYFAQY 311
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 202 YCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSK----------------RRKAIT 245
YC +L ++ A R ++++ N R P +E+ + + ++
Sbjct: 66 YCQRTLREIKILLAFRHENII-GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS 124
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 125 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIW-VSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN-----KNTLCG--- 107
Q +I+ + + + Y ++ S+ + D I+ A + + G
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 108 TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++ A
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 167 TLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLLH 195
L K A +++KML+LD +R AQ L
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
Query: 196 FEFFNDY 202
+F Y
Sbjct: 305 HAYFAQY 311
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 202 YCPTSLPASCLMTAPRFDSVVPSFNSPRRKPLMERNSK----------------RRKAIT 245
YC +L ++ A R ++++ N R P +E+ + + ++
Sbjct: 66 YCQRTLREIKILLAFRHENII-GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS 124
Query: 246 EPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 125 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
EI + R K+ N+V + + +++++E S+ ++ C E + +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 64 WV-----SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIML----ANKNTLCGTPNYIAP 114
S V + D L D S V D + + ++ + GTP ++AP
Sbjct: 128 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 115 EILNKNGHSFEVDVWSIGCIMYTLLVGKPPF-ETSTLKETY--SRIKKVEYKLPATLKKP 171
E++ + + +VD+WS+G + ++ G+PP+ + L+ Y + E + P L
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
Query: 172 AATMIKKMLLLDPVQRPPVAQLLHFEFFNDYCPTS 206
+ + L +D +R +L+ +F P S
Sbjct: 247 FRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLS 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
++ L+ + +LH +++IHRD+K N+ L + VK+ DFG A+I
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 167
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ QIL+G+ + HD +I+HRD+K N+ + N +KI DFG+A
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 99 LANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETST 149
L N + GT Y +PE D++SIG ++Y +LVG+PPF T
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M+Q L G+ +LH + I+HRDLK N+ ++ VK+ DFGLA
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE+L ++ ++ VD+WS+GCI + KP F ++ + +I
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 52/247 (21%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCG 107
Q +I+ S + + D +N+D + +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 108 TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPA 166
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++ A
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 167 TLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQLLH 195
L K A +++KML+LD +R AQ L
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
Query: 196 FEFFNDY 202
+F Y
Sbjct: 305 HAYFAQY 311
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D +
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 118 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 163 DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 223 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
Query: 211 CL 212
L
Sbjct: 282 NL 283
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D +
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 118 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 163 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 223 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
Query: 211 CL 212
L
Sbjct: 282 NL 283
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M+Q L G+ +LH + I+HRDLK N+ ++ VK+ DFGLA
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE+L ++ ++ VD+WS+GCI + KP F ++ + +I
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 51 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 109
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 110 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 215 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273
Query: 211 CL 212
L
Sbjct: 274 NL 275
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 55 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 113
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 114 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 158
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 159 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 219 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277
Query: 211 CL 212
L
Sbjct: 278 NL 279
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 155
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + + I+ E K S+++ L ++ D A
Sbjct: 52 QEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 110
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 111 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 155
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 156 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 215
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 216 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274
Query: 211 CL 212
L
Sbjct: 275 NL 276
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 191
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M+Q L G+ +LH + I+HRDLK N+ ++ VK+ DFGLA
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE+L ++ ++ VD+WS+GCI + KP F ++ + +I
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ +K +HRDL N ++++F VKIGDFG+ I E D RK
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
M+Q L G+ +LH + I+HRDLK N+ ++ VK+ DFGLA
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE+L ++ ++ VD+WS+GCI + KP F ++ + +I
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 53 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 111
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 112 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 216
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 217 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275
Query: 211 CL 212
L
Sbjct: 276 NL 277
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 58/250 (23%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWV---------SKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCG 107
Q +I+ S + + D +N+D L R + + + G
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDRGLARHTDDEMTG 181
Query: 108 ---TPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
T Y APEI LN ++ VD+WS+GCIM LL G+ F + + I ++
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 164 LPATLKKP-------------------------------AATMIKKMLLLDPVQRPPVAQ 192
A L K A +++KML+LD +R AQ
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 193 LLHFEFFNDY 202
L +F Y
Sbjct: 302 ALAHAYFAQY 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 287 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 450
Query: 211 CL 212
L
Sbjct: 451 NL 452
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 177
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 168
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 287 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450
Query: 211 CL 212
L
Sbjct: 451 NL 452
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI EG++++ + IHR+L+ N+ +SD KI DFGLA IE
Sbjct: 113 QIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLE----EMSDPAA 59
E + + L+H+ +V ++ +YII E S+++ + ++ ++ D AA
Sbjct: 54 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 112
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFND----------LTRMIMLANKNTLCGTP 109
Q +++ + + ++ + ++ N ++ ++ +D L R+I G
Sbjct: 113 Q----IAEGMAFIEERNYIHR-NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 167
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKK 159
+ APE +N + + DVWS G ++ ++ G+ P+ T E +++
Sbjct: 168 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 287 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 450
Query: 211 CL 212
L
Sbjct: 451 NL 452
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K +++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 191
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI++E K +++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 179
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL L+ +KI DFGLA
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 370 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + +P +RP L F ++F P P
Sbjct: 475 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 533
Query: 211 CL 212
L
Sbjct: 534 NL 535
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + ++H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
Y Q+ EG+ YL + IHRDL NL L+ +VKIGDFGL
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +T+ +F + QIL G+ Y+H IIHRDLK NL ++++ +KI DF LA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 72/257 (28%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + +KH NV+G F E+ VY++ L M N+ ++++D
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQKLTD 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNT------------ 104
Q +I Y G Y S+ ++ DL + N++
Sbjct: 125 DHVQFLI-------YQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFYLARH 174
Query: 105 -------LCGTPNYIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR 156
T Y APEI LN ++ VD+WS+GCIM LL G+ F + +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 157 IKKVEYKLPATLKKP-------------------------------AATMIKKMLLLDPV 185
I ++ A L K A +++KML+LD
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 186 QRPPVAQLLHFEFFNDY 202
+R AQ L +F Y
Sbjct: 295 KRITAAQALAHAYFAQY 311
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI++E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI++E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+++ QIL G+ Y+H ++HRDLK NL ++ +KI DFGLA
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APEI LN G++ +D+WS+GCI+ +L +P F
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I E D RK
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 188
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I E D RK
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 185
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I E D RK
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 99 LANKNTLCGTPNYIAPEILN---KNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ ++ + GT +IAPE+L+ K ++ VD++S GC+ Y ++ G PF S ++
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 155 SRIKKVEYKLPATLKKP---AATMIKKMLLLDPVQRPPVAQLLHFEFF 199
+ K A +I+KM+ +DP +RP +L FF
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLS-----DNFVVKIGDFGLAARI 297
++Q G+++LH I+HRDLK N+ +S I DFGL ++
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEXSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ ++ Q+L G++Y H K++HRDLK NL +++ +K+ DFGLA
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE 152
Y P+IL +S ++D+W +GCI Y + G+P F ST++E
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L E K + I + Y QI +G+ YL + +HRDL N+ + VKIGDFG
Sbjct: 112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 171
Query: 293 LAARIEFD 300
L IE D
Sbjct: 172 LTKAIETD 179
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L E K + I + Y QI +G+ YL + +HRDL N+ + VKIGDFG
Sbjct: 100 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 159
Query: 293 LAARIEFD 300
L IE D
Sbjct: 160 LTKAIETD 167
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ +T+ T +Y APE++ + G S DVWSIGCI++ VG F+T +E + ++++
Sbjct: 209 HHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 161 EYKLPATL 168
+P+ +
Sbjct: 269 LGPIPSRM 276
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 248 ETRFYMKQILEGVSYLHDHKIIHRDLKLGN-LFLSDNF 284
+ R Q+ + V +LHD+K+ H DLK N LF++ ++
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 175
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ +++ ++++ Q L V LH +IHRDLK NL ++ N +K+ DFGLA I+
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APE+ L +S +DVWS GCI+ L + +P F
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ +++ ++++ Q L V LH +IHRDLK NL ++ N +K+ DFGLA I+
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APE+ L +S +DVWS GCI+ L + +P F
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 93 LTRMIMLANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFE-TSTLK 151
L R K + G ++APE++ + S DVWS G +++ LL G+ PF L
Sbjct: 162 LAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221
Query: 152 ETYS-RIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
Y + K+ +P+T +P A +++ DP RP +L
Sbjct: 222 VAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 252 YMKQILEGVSYLHDHK---IIHRDLKLGNLFLSD--------NFVVKIGDFGLA 294
+ QI G++YLHD IIHRDLK N+ + N ++KI DFGLA
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 127 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 183
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 184 ENNVMKIADFGLARDI 199
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 276
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 277 TNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ +++ ++++ Q L V LH +IHRDLK NL ++ N +K+ DFGLA I+
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
Y APE+ L +S +DVWS GCI+ L + +P F
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+E + RFY +I+ G+ ++H+ +++RDLK N+ L ++ V+I D GLA
Sbjct: 290 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 81 LNDDSSGVMFNDLTRMIMLANK--NTLCGTPNYIAPEILNKN-GHSFEVDVWSIGCIMYT 137
L D+ V +DL + K + GT Y+APE+L K + D +S+GC+++
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 138 LLVGKPPFETSTLKETYS 155
LL G PF K+ +
Sbjct: 384 LLRGHSPFRQHKTKDKHE 401
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 124 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 180
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 181 ENNVMKIADFGLARDI 196
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 273
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 274 TNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+TE + + +L G ++H+ IIHRDLK N L+ + VKI DFGLA I D
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 75 YGFGYQLNDDSSGVMFNDLTRMIMLA-----NKN------TLCGTPNYIAPE-ILNKNGH 122
+G +N D + NDL NKN + T Y APE IL + +
Sbjct: 175 FGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 234
Query: 123 SFEVDVWSIGCIMYTLL 139
+ +D+WS GCI LL
Sbjct: 235 TNSIDIWSTGCIFAELL 251
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+E + RFY +I+ G+ ++H+ +++RDLK N+ L ++ V+I D GLA
Sbjct: 289 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 81 LNDDSSGVMFNDLTRMIMLANK--NTLCGTPNYIAPEILNKN-GHSFEVDVWSIGCIMYT 137
L D+ V +DL + K + GT Y+APE+L K + D +S+GC+++
Sbjct: 323 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 138 LLVGKPPFETSTLKETYS 155
LL G PF K+ +
Sbjct: 383 LLRGHSPFRQHKTKDKHE 400
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 181 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 237
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 238 ENNVMKIADFGLARDI 253
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 330
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
+E + RFY +I+ G+ ++H+ +++RDLK N+ L ++ V+I D GLA
Sbjct: 290 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 340
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 81 LNDDSSGVMFNDLTRMIMLANK--NTLCGTPNYIAPEILNKN-GHSFEVDVWSIGCIMYT 137
L D+ V +DL + K + GT Y+APE+L K + D +S+GC+++
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 138 LLVGKPPFETSTLKETYS 155
LL G PF K+ +
Sbjct: 384 LLRGHSPFRQHKTKDKHE 401
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 245 TEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAA 295
+E + RFY +I+ G+ ++H+ +++RDLK N+ L ++ V+I D GLA
Sbjct: 290 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 340
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 81 LNDDSSGVMFNDLTRMIMLANK--NTLCGTPNYIAPEILNKN-GHSFEVDVWSIGCIMYT 137
L D+ V +DL + K + GT Y+APE+L K + D +S+GC+++
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 138 LLVGKPPFETSTLKETYS 155
LL G PF K+ +
Sbjct: 384 LLRGHSPFRQHKTKDKHE 401
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL N+ + +N V K+ DFGLA IE
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 121 AQ----IASGMAYVERMNY-----------VHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
Query: 211 CL 212
L
Sbjct: 285 NL 286
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 122 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT 178
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 179 ENNVMKIADFGLARDI 194
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 271
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 272 TNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 102 KNTLCGT--PNYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIK 158
KNT G ++APE L ++ + DVWS G +M+ + +G P+ ++E + +K
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 159 KV-EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
+ PA M++ P QRP QL+
Sbjct: 274 EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ QI EG++++ IHRDL+ N+ +S + V KI DFGLA
Sbjct: 283 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 4 EIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVI 63
E + ++L+H +V H+ +YII E K S+++ S + + QP+
Sbjct: 227 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKS-------DEGSKQPL- 277
Query: 64 WVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN------------- 110
K +D+S + G + + + DL +L + + +C +
Sbjct: 278 --PKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK 334
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKLP 165
+ APE +N + + DVWS G ++ ++ G+ P+ + E +++ Y++P
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMP 389
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 14 RNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPVIWVSKWV---D 70
R + H F+D ++Y+++E ++ L + + PA ++++ V D
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE----RIPAEMARFYLAEIVMAID 176
Query: 71 YSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLANKNTL-----CGTPNYIAPEILN 118
+ G+ ++ L D + D + L T+ GTP+Y++PEIL
Sbjct: 177 SVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 119 KNGHSF-------EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYK 163
G E D W++G Y + G+ PF + ETY +I V YK
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI--VHYK 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
SK + I RFY+ +I+ + +H +HRD+K N+ L +++ DFG ++
Sbjct: 153 SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212
Query: 298 EFDG 301
DG
Sbjct: 213 RADG 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEF 299
+TE + + +L GV Y+H I+HRDLK N ++ + VK+ DFGLA +++
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 111 YIAPE-ILNKNGHSFEVDVWSIGCIMYTLL 139
Y APE IL + ++ +DVWSIGCI LL
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V+KI DFGLA I
Sbjct: 192 ENNVMKIADFGLARDI 207
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 104 TLCGTPNYIAPEILNKNGHSF--EVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI--KK 159
T GTP ++APE+LN S+ + D WS G +++ LL+G PF +T S++ KK
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK 292
Query: 160 VEYKLP 165
+ ++ P
Sbjct: 293 LCFENP 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDN--FVVKIGDFGLA 294
M+QI + YLH+ I HRD+K N S N F +K+ DFGL+
Sbjct: 174 MRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 1 MSQEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD 50
+ E+ + + L H N+ + +ED +++ +++ELC +++ N D
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFID 124
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 262
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 225 FNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF 284
N RRK + + + + + + + Q+ +G+++L IHRD+ N+ L++
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 189
Query: 285 VVKIGDFGLAARIEFD 300
V KIGDFGLA I D
Sbjct: 190 VAKIGDFGLARDIMND 205
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 279
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 280 APKNIYSIMQACWALEPTHRPTFQQICSF 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 49/244 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+EI + + LKH N+V F + ++++ E C + EL + E + +
Sbjct: 51 REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEH---LVKSI 107
Query: 63 IWVS-KWVDYSDKYGFGYQ-LNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEILNKN 120
W + + V++ K+ ++ + ++ + + + ++ L G +Y E+ +
Sbjct: 108 TWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW 167
Query: 121 GHSFE-----------VDVWSIGCIMYTLLVGKPPFET-----------STLKETYSRIK 158
S E VDVW+IGC+ LL G P + TL + R +
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQ 227
Query: 159 KV---------------------EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFE 197
+V E K P + PA ++K L +DP +R QLLH
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFP-NISYPALGLLKGCLHMDPTERLTCEQLLHHP 286
Query: 198 FFND 201
+F +
Sbjct: 287 YFEN 290
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ ++ + E + Q L+ V++ H H IHRD+K N+ ++ + V+K+ DFG A
Sbjct: 93 DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 262
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 271
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
QI G++Y+ +HRDL+ N+ + +N V K+ DFGL IE
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 49/242 (20%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACD----LEEMSDPA 58
QE + + L+H +V ++ + +YI+ E K S+++ L ++ D A
Sbjct: 229 QEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 287
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPN-------- 110
AQ ++ + Y ++ + + DL +L +N +C +
Sbjct: 288 AQ----IASGMAYVERMNY-----------VHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 111 ---------------YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETY 154
+ APE + + DVWS G ++ L G+ P+ +E
Sbjct: 333 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 155 SRIKKVEYKLPATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPAS 210
++++ Y++P + P + ++ + DP +RP L F ++F P P
Sbjct: 393 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPGE 451
Query: 211 CL 212
L
Sbjct: 452 NL 453
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I E D RK
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 188
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++ A
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-D 274
Query: 170 KPAATMIKKMLLL---DPVQRPPVAQLL 194
M + ML +P QRP ++L+
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 250 RFYMKQILEGVSYLHDHK--IIHRDLKLGNLFLSD-NFVVKIGDFGLAA 295
R + +QIL+G+ +LH IIHRDLK N+F++ VKIGD GLA
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL + K +HRDL N L ++F VK+ DFGLA I
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I E D RK
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 187
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 225 FNSPRRKPLMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNF 284
N RRK + + + + + + + Q+ +G+++L IHRD+ N+ L++
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 197
Query: 285 VVKIGDFGLAARIEFD 300
V KIGDFGLA I D
Sbjct: 198 VAKIGDFGLARDIMND 213
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 287
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 288 APKNIYSIMQACWALEPTHRPTFQQICSF 316
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 32/216 (14%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E+AI + L+H N+V F + I+ E + S+ L + + E++ + +
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKN---TLC------------- 106
Y G Y L++ + ++ DL +L +K +C
Sbjct: 143 A-------YDVAKGMNY-LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL 194
Query: 107 ------GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI--K 158
GTP ++APE+L + + DV+S G I++ L + P+ + + + K
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 159 KVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
++P L A +I+ +P +RP A ++
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 256 ILEGVSYLHDHK--IIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +G++YLH+ I+HRDLK NL + + VK+ DFGL+
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
G+ YLH IIHRD+K N+ L +NFV KI DFG++ + GQ
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 271
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 262
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 229 RRKPLMERNSKRRKAITEPETRFYMK-------QILEGVSYLHDHKIIHRDLKLGNLFLS 281
RR P ME + + PE + K Q+ G+ YL K IHRDL N+ ++
Sbjct: 135 RRPPGMEYSYDINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 282 DNFVVKIGDFGLAARI 297
+N V++I DFGLA I
Sbjct: 192 ENNVMRIADFGLARDI 207
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKV-EYKLPATL 168
++APE L ++ + DVWS G +M+ + +G P+ ++E + +K+ PA
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+I +G++YL+ K +HRDL N ++ +F VKIGDFG+ I
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 262
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGLA +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 229 RRKPLMERNSKRRKAITEPETR---FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFV 285
R+ ++E + A + TR + Q+ +G+++L IHRD+ N+ L++ V
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 202
Query: 286 VKIGDFGLAARIEFD 300
KIGDFGLA I D
Sbjct: 203 AKIGDFGLARDIMND 217
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 291
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 292 APKNIYSIMQACWALEPTHRPTFQQICSF 320
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 271
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++ A
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-D 274
Query: 170 KPAATMIKKMLLL---DPVQRPPVAQLL 194
M + ML +P QRP ++L+
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
A +KK T+
Sbjct: 247 AFMKKLQPTV 256
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 308
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATL 168
++APE + ++ + DVWS G +++ + +G P+ + E + R K +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRM 315
Query: 169 KKPAAT---MIKKMLLL---DPVQRPPVAQLL 194
+ P T M + ML +P QRP ++L+
Sbjct: 316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++ A
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-D 276
Query: 170 KPAATMIKKMLLL---DPVQRPPVAQLL 194
M + ML +P QRP ++L+
Sbjct: 277 YTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATL 168
++APE + ++ + DVWS G +++ + +G P+ + E + R K +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRM 322
Query: 169 KKPAAT---MIKKMLLL---DPVQRPPVAQLL 194
+ P T M + ML +P QRP ++L+
Sbjct: 323 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATL 168
++APE + ++ + DVWS G +++ + +G P+ + E + R K +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRM 320
Query: 169 KKPAAT---MIKKMLLL---DPVQRPPVAQLL 194
+ P T M + ML +P QRP ++L+
Sbjct: 321 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 110 NYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATL 168
++APE + ++ + DVWS G +++ + +G P+ + E + R K +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRM 313
Query: 169 KKPAAT---MIKKMLLL---DPVQRPPVAQLL 194
+ P T M + ML +P QRP ++L+
Sbjct: 314 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAAR 296
G+ YLH IIHRD+K N+ L +NFV KI DFG++ +
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q ++ + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLVGIK----HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+GCIM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLXGIK----HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLXGIK----HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
G+++LH++ IHRD+K N+ L + F KI DFGLA
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMS 55
++E+ I R +KH NVV +FF +D F+ ++LE + +Y ++ ++
Sbjct: 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLK 135
Query: 56 DPAAQPVIWVSKW-------VDYSDKYGFGYQ-------LNDDSSGVMFNDLTRMIMLAN 101
P++ + + + Y G ++ L D SGV+ ++I +
Sbjct: 136 Q--TMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVL-----KLIDFGS 188
Query: 102 KNTL-CGTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
L G PN Y APE I ++ +D+WS GC+M L+ G+P F +
Sbjct: 189 AKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P+ IK M
Sbjct: 249 DQLVEIIKV-------LGTPSREQIKTM 269
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARIEFDGQ 302
+ YM Q+L ++Y+H I HRD+K NL L + V+K+ DFG +A+I G+
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGE 196
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 123
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 124 LLYQMLXGIK----HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 179
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 240 EFMKKLQPTV 249
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 13 HRNVVGFHSFFEDSKFVYIILELC---------------RKRSMMELYNSACDLEEMSDP 57
H NV+ ++ +F+YI LELC + + YN L +++
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 58 AA---------QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT--------RMIMLA 100
A + + + V S ++ Q ++ ++ +D +
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 101 NKNTLCGTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLV-GKPPF------ETSTL 150
N N GT + APE+L K + +D++S+GC+ Y +L GK PF E++ +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 151 KETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
+ +S + +++ +L A +I +M+ DP++RP ++L F
Sbjct: 266 RGIFS-LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLS-------------DNFVVKIGDFGLAARIE 298
++QI GV++LH KIIHRDLK N+ +S +N + I DFGL +++
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
G+++LH++ IHRD+K N+ L + F KI DFGLA
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 86/215 (40%), Gaps = 30/215 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDPAAQPV 62
+E+AI + L+H N+V F + I+ E + S+ L + + E++ + +
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 63 IWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTL----------------- 105
Y G Y N + V N + +++ K T+
Sbjct: 143 A-------YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 106 ----CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI--KK 159
GTP ++APE+L + + DV+S G I++ L + P+ + + + K
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 160 VEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
++P L A +I+ +P +RP A ++
Sbjct: 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 256 ILEGVSYLHDHK--IIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ +G++YLH+ I+HR+LK NL + + VK+ DFGL+
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 13 HRNVVGFHSFFEDSKFVYIILELC---------------RKRSMMELYNSACDLEEMSDP 57
H NV+ ++ +F+YI LELC + + YN L +++
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 58 AA---------QPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLT--------RMIMLA 100
A + + + V S ++ Q ++ ++ +D +
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 101 NKNTLCGTPNYIAPEIL---NKNGHSFEVDVWSIGCIMYTLLV-GKPPF------ETSTL 150
N N GT + APE+L K + +D++S+GC+ Y +L GK PF E++ +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 151 KETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
+ +S + +++ +L A +I +M+ DP++RP ++L F
Sbjct: 266 RGIFS-LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLS-------------DNFVVKIGDFGLAARIE 298
++QI GV++LH KIIHRDLK N+ +S +N + I DFGL +++
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 95 RMIMLANKNTLCGTPNYIAPEILNKNGH---SFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
R ++ + T TP Y PEI++ + + D+W++GCI+Y L + PFE
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG--- 256
Query: 152 ETYSRIKKVEYKLPA--TLKKPAATMIKKMLLLDPVQRPPVAQLLH 195
RI +Y +P T ++I+ ML ++P +R +A+++H
Sbjct: 257 -AKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 251 FYMKQILEGVSYLHDHK--IIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
FY Q V ++H K IIHRDLK+ NL LS+ +K+ DFG A I
Sbjct: 142 FY--QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR----RLKEGTRMR 267
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L++ + R + + + QI +G+SYL D +++HRDL N+ + VKI DFG
Sbjct: 105 LLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFG 164
Query: 293 LAARIEFD 300
LA ++ D
Sbjct: 165 LARLLDID 172
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+T+ + +QI G+ YL +HRDL N + +N +VKIGDFG++
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 244 ITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+TE + + +L G +++H+ IIHRDLK N L+ + VK+ DFGLA I
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 111 YIAPE-ILNKNGHSFEVDVWSIGCIMYTLL 139
Y APE IL + ++ +D+WS GCI LL
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y Q+ +G+ +L K IHRDL N+ LS+ VVKI DFGLA I D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++ + DVWS G +++ + +G P+ + E + R K ++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMR 267
Query: 170 KPAAT---MIKKMLLL---DPVQRPPVAQLL 194
P T M + ML +P QRP ++L+
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
G+++LH++ IHRD+K N+ L + F KI DFGLA
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFL-----SDNFVVKIGDFGLA 294
++ Q++ GV++ H + +HRDLK NL L S+ V+KIGDFGLA
Sbjct: 137 FLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 35/128 (27%)
Query: 111 YIAPEILNKNGH-SFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLPATLK 169
Y PEIL + H S VD+WSI CI +L+ P F + + +I +V LP
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV-LGLPDDTT 261
Query: 170 KPAATMI-------------------------------KKMLLLDPVQRPPVAQLLHFEF 198
P T + ML +DPV+R L +
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 199 F--NDYCP 204
F ND+ P
Sbjct: 322 FSHNDFDP 329
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
G+++LH++ IHRD+K N+ L + F KI DFGLA
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ Q+ +G+++L IHRD+ N+ L++ V KIGDFGLA I D
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 291
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 292 APKNIYSIMQACWALEPTHRPTFQQICSF 320
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ Q+ +G+++L IHRD+ N+ L++ V KIGDFGLA I D
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 293
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 294 APKNIYSIMQACWALEPTHRPTFQQICSF 322
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 234 MERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ERN K +T Y QI + ++YL +HRD+ + N+ ++ VK+GDFGL
Sbjct: 115 LERNKNSLKVLT---LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 171
Query: 294 AARIE 298
+ IE
Sbjct: 172 SRYIE 176
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+++PE +N + DVW M+ +L GK PF K+ ++K + +LP
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDL 250
Query: 170 KPAA--TMIKKMLLLDPVQRPPVAQLL 194
P T++ + DP RP +L+
Sbjct: 251 CPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 234 MERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ERN K +T Y QI + ++YL +HRD+ + N+ ++ VK+GDFGL
Sbjct: 99 LERNKNSLKVLT---LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 155
Query: 294 AARIE 298
+ IE
Sbjct: 156 SRYIE 160
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+++PE +N + DVW M+ +L GK PF K+ ++K + +LP
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDL 234
Query: 170 KPAA--TMIKKMLLLDPVQRPPVAQLL 194
P T++ + DP RP +L+
Sbjct: 235 CPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
+ Q+ +G+++L IHRD+ N+ L++ V KIGDFGLA I D
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKL--PAT 167
++APE + ++ + DVWS G +++ + +G P+ + + ++ K Y++ PA
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 285
Query: 168 LKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
K ++++ L+P RP Q+ F
Sbjct: 286 APKNIYSIMQACWALEPTHRPTFQQICSF 314
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ G F + + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 234 MERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ERN K +T Y QI + ++YL +HRD+ + N+ ++ VK+GDFGL
Sbjct: 103 LERNKNSLKVLT---LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 159
Query: 294 AARIE 298
+ IE
Sbjct: 160 SRYIE 164
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+++PE +N + DVW M+ +L GK PF K+ ++K + +LP
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDL 238
Query: 170 KPAA--TMIKKMLLLDPVQRPPVAQLL 194
P T++ + DP RP +L+
Sbjct: 239 CPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ +TL T +Y APE++ G S DVWSIGCI+ +G F T KE + ++++
Sbjct: 190 HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 161 EYKLP 165
LP
Sbjct: 250 LGPLP 254
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 141 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 132
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 133 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFV 188
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ G F + + +++ I+++ P
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 248
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 249 EFMKKLQPTV 258
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 100 ANKNTLCGTPNYIAPEILNKNGH-------SFEVDVWSIGCIMYTLLV-GKPPF------ 145
N N GT + APE+L ++ + + +D++S+GC+ Y +L GK PF
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 146 ETSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
E++ ++ +S + +++ +L A +I +M+ DP++RP ++L F
Sbjct: 247 ESNIIRGIFS-LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLS-------------DNFVVKIGDFGLAARIE 298
++QI GV++LH KIIHRDLK N+ +S +N + I DFGL +++
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Y QI +G+ YL + +HRDL N+ + VKI DFGLA + D
Sbjct: 115 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L+ N S + DVWS G ++Y L
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 101 NKNTLCGTPNYIAPEILNKNGH-------SFEVDVWSIGCIMYTLLV-GKPPF------E 146
N N GT + APE+L ++ + + +D++S+GC+ Y +L GK PF E
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 147 TSTLKETYSRIKKVEYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
++ ++ +S + +++ +L A +I +M+ DP++RP ++L F
Sbjct: 248 SNIIRGIFS-LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLS-------------DNFVVKIGDFGLAARIE 298
++QI GV++LH KIIHRDLK N+ +S +N + I DFGL +++
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ G F + + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 131
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 132 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ G F + + +++ I+++ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 248 EFMKKLQPTV 257
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ R + Y QI +G+ YL + +HRDL N+ + VKI DFGLA +
Sbjct: 119 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 299 FD 300
D
Sbjct: 179 LD 180
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L+ N S + DVWS G ++Y L
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 151 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q ++ + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLVGIK----HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+G IM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q ++ + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLVGIK----HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVG 141
Y APE++ G+ VD+WS+G IM ++ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ R + Y QI +G+ YL + +HRDL N+ + VKI DFGLA +
Sbjct: 106 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
Query: 299 FD 300
D
Sbjct: 166 LD 167
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L+ N S + DVWS G ++Y L
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 239 KRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+ R + Y QI +G+ YL + +HRDL N+ + VKI DFGLA +
Sbjct: 107 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
Query: 299 FD 300
D
Sbjct: 167 LD 168
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L+ N S + DVWS G ++Y L
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
+A+ P Q+ G++Y+ IHRDL+ N+ + + + KI DFGLA IE
Sbjct: 100 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIE 156
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 29/232 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELY----NSACDLEEMSDPA 58
+E I + LKH +V ++ + +YI+ E K S+++ A L + D A
Sbjct: 53 EEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMA 111
Query: 59 AQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFND----------LTRMIMLANKNTLCGT 108
AQ V+ + Y ++ + ++ + S+ ++ + L R+I G
Sbjct: 112 AQ----VAAGMAYIERMNYIHR-DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA 166
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE + + DVWS G ++ L+ G+ P+ +E ++++ Y++
Sbjct: 167 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRM 225
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQLLHF--EFFNDYCPTSLPASCL 212
P P + ++ DP +RP L F ++F P P L
Sbjct: 226 PCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGENL 277
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HR+L N ++ +F VKIGDFG+ I E D RK
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 188
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSY 168
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 169 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 285 EFMKKLQPTV 294
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ + D E MS
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIHMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM-LANKNTLCG-------- 107
Q + + + G ++ S+ V+ +D T I+ T C
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYV 186
Query: 108 -TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
T Y APE++ G++ VD+WS+GCIM L+ G F+ + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFDGQRK 304
+I +G++YL+ K +HR+L N ++ +F VKIGDFG+ I E D RK
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+ GT Y++PE + DV+S+GC++Y +L G+PPF
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSD---NFVVKIGDFGLA 294
+A TE E MK I E + YLH I HRD+K NL + N ++K+ DFG A
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 127 DVWSIGCIMYTLLVGKPPFET----STLKETYSRIKKVEYKLP----ATLKKPAATMIKK 178
D+WS+G IMY LL G PPF + + +RI+ +Y+ P + + + +I+
Sbjct: 180 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 239
Query: 179 MLLLDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMTA 215
+L +P QR + + ++ + T +P + L T+
Sbjct: 240 LLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHTS 274
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL +E D
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 25/147 (17%)
Query: 56 DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPE 115
D AA+ ++ S V +G G L DD ++ + + +PE
Sbjct: 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI-----------RWTSPE 220
Query: 116 ILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE--YKLPATLKKPA 172
+ + DVWS G +++ ++ G+ P+ + ++ IK V+ Y+LP + PA
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDCPA 277
Query: 173 ATMIKKMLLLDPVQ-----RPPVAQLL 194
A L+LD Q RP Q++
Sbjct: 278 ALY---QLMLDCWQKDRNNRPKFEQIV 301
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+ GT Y++PE + DV+S+GC++Y +L G+PPF
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+ GT Y++PE + DV+S+GC++Y +L G+PPF
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 262
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ IE D
Sbjct: 151 LRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + + DVWS G +M+ ++ G+ P+ + ++ I++ Y+LPA +
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE-GYRLPAPMD 272
Query: 170 KPAATMIKKMLLLDPVQ-----RPPVAQLL 194
PA L+LD Q RP Q++
Sbjct: 273 CPAGL---HQLMLDCWQKERAERPKFEQIV 299
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+ GT Y++PE + DV+S+GC++Y +L G+PPF
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFET-STLKETYSRIKK 159
+ GT Y++PE + DV+S+GC++Y +L G+PPF S + Y +++
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
+ GT Y++PE + DV+S+GC++Y +L G+PPF
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 258 EGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ +++ H + IIHRD+K N+ +S VK+ DFG+A I G
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 270
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 271 TNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 131
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 132 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 247
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 248 EFMKKLQPTV 257
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 269
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 270 TNELYMMMRDCWHAVPSQRPTFKQLV 295
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 266
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 267 TNELYMMMRDCWHAVPSQRPTFKQLV 292
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 77 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 135
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 136 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 191
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 251
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 252 EFMKKLQPTV 261
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 123
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 124 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 179
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 240 EFMKKLQPTV 249
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 125 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 241 EFMKKLQPTV 250
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 277
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 277
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLL 194
M++ P QRP QL+
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 277
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ + D E MS
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY 128
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM------LANKNTLCG--- 107
Q + + + G ++ S+ V+ +D T I+ A+ N +
Sbjct: 129 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYV 184
Query: 108 -TPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
T Y APE++ G+ VD+WS+GCIM L+ G F+ + + ++++
Sbjct: 185 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSY 168
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 169 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 285 EFMKKLQPTV 294
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 277
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 125 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 241 EFMKKLQPTV 250
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 129
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 130 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 185
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 245
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 246 EFMKKLQPTV 255
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 66 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSY 124
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 125 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 241 EFMKKLQPTV 250
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 131
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 132 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 247
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 248 EFMKKLQPTV 257
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+GCIM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL K IHRDL N+ ++++ V+KI DFGLA I
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE-YKLPATL 168
++APE L ++ + DVWS G +++ + +G P+ ++E + +K+ P+
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 318
Query: 169 KKPAATMIKKMLLLDPVQRPPVAQLLH 195
M++ P QRP QL+
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++ + F E+ + VY+++EL ++ ++ D E MS
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSR-IKKVEYKLP 165
Y APE++ G+ VD+WS+GCIM ++ K F + +++ I+++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 166 ATLKKPAATM 175
+KK T+
Sbjct: 247 EFMKKLQPTV 256
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+GCIM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE ++++ H+ VWS+G ++Y ++ G PFE I + E P
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFP 253
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
A + +I++ L P RP + ++L
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI-- 297
+ + E +R + Q++ + + H ++HRD+K N+ + K+ DFG A +
Sbjct: 133 KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD 192
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 193 EPYTDFDGTR 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 143 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 147 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 203 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 259
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 260 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+GCIM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 112 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 116 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 171
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 172 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 228
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 130 LRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVE--YKLPAT 167
+ APE + + DVWS G +M+ ++ G+ P+ T ++ IK VE Y+LP+
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV---IKAVEEGYRLPSP 249
Query: 168 LKKPAATMIKKMLLLDPVQR 187
+ PAA L+LD Q+
Sbjct: 250 MDCPAALY---QLMLDCWQK 266
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + Q+L G+ +LH IIHRDLK N+ + + +KI DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFF------EDSKFVYIILELCRKRSMMELYNSACDLEEMSD 56
+E+ + + + H+N++G + F E+ + VYI++EL ++ ++ D E MS
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY 130
Query: 57 PAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
Q + + + G ++ S+ V+ +D T I+ GT
Sbjct: 131 LLYQMLCGIK----HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 110 ---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APE++ G+ VD+WS+GCIM ++ G F + + ++++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 118 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 165
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 122 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 178 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 234
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 235 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 119 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 175 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 231
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 117 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 164
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 121 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 177 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 233
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 234 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 119 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 175 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 231
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 124 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 180 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 236
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 119 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 175 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 231
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG++YL + +IHRDL N + +N V+K+ DFG+ R D Q
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQ 157
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 149 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 209 SNSEVVEDI 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Q+ +G+ YL K +HRDL N L + F VK+ DFGLA
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 89 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 146
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 147 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 197
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 198 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 257
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 258 DQLVEIIKV-------LGTPTREQIREM 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI EG++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 97 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 154
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 155 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 205
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 206 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 265
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 266 DQLVEIIKV-------LGTPTREQIREM 286
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 141 LRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 56 DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPE 115
D AA+ ++ S V +G L DD+S D T L K + + APE
Sbjct: 160 DLAARNILVNSNLVCKVSDFGLSRFLEDDTS-----DPTYTSALGGKIPI----RWTAPE 210
Query: 116 ILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLKKPAAT 174
+ + DVWS G +M+ ++ G+ P+ T ++ + I++ +Y+LP + P+A
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLPPPMDCPSAL 269
Query: 175 MIKKMLLLDPVQ-----RPPVAQLLH 195
L+LD Q RP Q+++
Sbjct: 270 ---HQLMLDCWQKDRNHRPKFGQIVN 292
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 152
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 153 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 264 DQLVEIIKV-------LGTPTREQIREM 284
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 152
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 153 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 204 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 264 DQLVEIIKV-------LGTPTREQIREM 284
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 99 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 156
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 157 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 207
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 208 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 267
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 268 DQLVEIIKV-------LGTPTREQIREM 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L E K ++ I + Y QI +G+ YL + IHRDL N+ + + VKIGDFG
Sbjct: 103 LREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 293 LA 294
L
Sbjct: 163 LT 164
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S N VK+GDFGL+ +E
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 499 Q----LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 555 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 611
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFG++ +E D
Sbjct: 137 LRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + + DVWS G +M+ ++ G+ P+ + ++ I++ Y+LP +
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE-GYRLPPPMD 258
Query: 170 KPAATMIKKMLLLDPVQ-----RPPVAQLLHF 196
P A L+LD Q RP Q+++
Sbjct: 259 CPIAL---HQLMLDCWQKERSDRPKFGQIVNM 287
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 48/208 (23%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 140 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 197
Query: 60 QPVIWVSKWVDYSDKYGFGYQLNDD-----SSGVMFNDLTRMIMLANKNT----LC---- 106
PVI+V ++ YQL S G+ D+ +L + +T LC
Sbjct: 198 LPVIYVKLYM---------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 248
Query: 107 ------GTPN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLK 151
G PN Y APE I ++ +DVWS GC++ LL+G+P F +
Sbjct: 249 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 308
Query: 152 ETYSRIKKVEYKLPATLKKPAATMIKKM 179
+ I KV L P I++M
Sbjct: 309 DQLVEIIKV-------LGTPTREQIREM 329
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 150 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 118 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 117 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 123 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 66 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 123
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 124 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 183 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 243 V-------LGTPTREQIREM 255
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 124 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 126 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 125 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + G+ YL + IHRDL N+ + +N+V KI DFGL+
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 130
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 250 V-------LGTPTREQIREM 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 138 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 74 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 131
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 132 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 191 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 251 V-------LGTPTREQIREM 263
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + G+ YL + IHRDL N+ + +N+V KI DFGL+
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 144 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 80 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 137
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 138 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 196
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 197 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 257 V-------LGTPTREQIREM 269
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 114 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173
Query: 297 I 297
+
Sbjct: 174 L 174
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 62 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 119
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 120 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 178
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 179 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 239 V-------LGTPTREQIREM 251
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 69 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 126
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 127 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 185
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 186 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 246 V-------LGTPTREQIREM 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ A+ P+ + QI G+ YL H ++H+DL N+ + D VKI D GL
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFG++ +E D
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + + DVWS G +M+ ++ G+ P+ + ++ I++ Y+LP +
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE-GYRLPPPMD 243
Query: 170 KPAATMIKKMLLLDPVQ-----RPPVAQLLHF 196
P A L+LD Q RP Q+++
Sbjct: 244 CPIAL---HQLMLDCWQKERSDRPKFGQIVNM 272
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 250 RFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAARI 297
+ YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A ++
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 130
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 250 V-------LGTPTREQIREM 262
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 297 I 297
+
Sbjct: 173 L 173
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 118
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 238 V-------LGTPTREQIREM 250
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 238 SKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLAAR 296
S+ ++ + + YM Q+ ++Y+H I HRD+K NL L D V+K+ DFG A +
Sbjct: 117 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176
Query: 297 I 297
+
Sbjct: 177 L 177
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 2 SQEIAIHRSLKHRNVVGFHSFFEDS--KFVYIILELCRKRSMMELYNSACDLEEMSDPAA 59
++E+ I R L H N+V FF S K + L L +Y A
Sbjct: 65 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--T 122
Query: 60 QPVIWVSKW-------VDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLAN----KNTLCGT 108
PVI+V + + Y +G ++ + ++ + T ++ L + K + G
Sbjct: 123 LPVIYVKLYMYQLFRSLAYIHSFGICHR-DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 181
Query: 109 PN--------YIAPE-ILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKK 159
PN Y APE I ++ +DVWS GC++ LL+G+P F + + I K
Sbjct: 182 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
Query: 160 VEYKLPATLKKPAATMIKKM 179
V L P I++M
Sbjct: 242 V-------LGTPTREQIREM 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 137 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHRDL N+ + + VKIGDFGL
Sbjct: 137 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HRDL N+ ++ N V K+ DFG++ +E D
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + + DVWS G +M+ ++ G+ P+ + ++ I++ Y+LP +
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE-GYRLPPPMD 237
Query: 170 KPAATMIKKMLLLDPVQ-----RPPVAQLLHF 196
P A L+LD Q RP Q+++
Sbjct: 238 CPIAL---HQLMLDCWQKERSDRPKFGQIVNM 266
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ A+ P+ + QI G+ YL H ++H+DL N+ + D VKI D GL
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ K I G++YLH IIHRDL N + +N V + DFGLA
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 104 TLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV---GKPPFETSTLKETYSRIKKV 160
T+ G P ++APE++N + +VDV+S G ++ ++ P + T+ + +
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240
Query: 161 EYKLPATLKKPAATMIKKMLLLDPVQRPPVAQLLHF 196
+ P + + LDP +RP +L H+
Sbjct: 241 DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW 276
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG++YL + +IHRDL N + +N V+K+ DFG+ R D Q
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQ 158
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 150 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 210 SNSEVVEDI 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG++YL + +IHRDL N + +N V+K+ DFG+ R D Q
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQ 155
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 147 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 207 SNSEVVEDI 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG++YL + +IHRDL N + +N V+K+ DFG+ R D Q
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQ 160
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 152 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 212 SNSEVVEDI 220
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG++YL + +IHRDL N + +N V+K+ DFG+ R D Q
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQ 157
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 149 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 209 SNSEVVEDI 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFD 300
+A+T + + QI +G+ YL + K++HRDL N+ +++ +KI DFGL+ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 301 GQRKR 305
KR
Sbjct: 205 SXVKR 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 190
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 187
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ +T + QI + YL IHRDL N + +N VVK+ DFGL+
Sbjct: 124 REEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YI+ E ++++ Y C+ EE++
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD-YLRECNREEVTAVVLLYM 135
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 136 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGA 191
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K Y++
Sbjct: 192 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK-GYRM 250
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQ 192
P +++ P RP A+
Sbjct: 251 EQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI---EFD 300
Q+ +G+ +L K +HRDL N L + F VK+ DFGLA + EFD
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFD 190
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL + +HRDL N+ ++ N V K+ DFGL+ +E D
Sbjct: 153 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE ++ + DVWS G +M+ ++ G+ P+ + E I ++LP +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTPMD 274
Query: 170 KPAA 173
P+A
Sbjct: 275 CPSA 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 239 KRRKAITEPETRFYM-KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+ ++ + ET M + EG++YL + +IHRDL N + +N V+K+ DFG+ R
Sbjct: 114 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRF 172
Query: 298 EFDGQ 302
D Q
Sbjct: 173 VLDDQ 177
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETS 148
+TR ++ + GT + +PE+ + + +S + DVWS G +M+ + GK P+E
Sbjct: 169 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
Query: 149 TLKETYSRI 157
+ E I
Sbjct: 229 SNSEVVEDI 237
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
QI +G+ YL + +++HRDL N+ + VKI DFGLA +E D
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGK---PPFETSTLKETYSR 156
N+ GT +Y+APE L +S + D+WS+G + L VG+ PP + L+ + R
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGR 227
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+L G++YL + H+I+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 165
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 241 RKAITEP-ETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R I EP ++ + Q+++ + YLH ++HRD+K N+ L+ VK+ DFGL+
Sbjct: 102 RANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 111 YIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI 157
Y APEIL ++ +D+WS+GCI+ +L GKP F S+ RI
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ +TL +Y APE++ G S DVWSIGCI+ +G F T KE + ++++
Sbjct: 190 HHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 161 EYKLP 165
LP
Sbjct: 250 LGPLP 254
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 248 ETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+TR ++I++G+ YLH I+H+DLK N+F DN V I DFGL
Sbjct: 131 KTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Q+ +G+++L IHRDL N+ L+ + KI DFGLA I+ D
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++FE DVWS G ++ L +G P+ + + ++ K +++ +
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 295
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQLLHF 196
PA ++K DP++RP Q++
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQL 324
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFD 300
+A+T + + QI +G+ YL + K++HRDL N+ +++ +KI DFGL+ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 301 GQRKR 305
KR
Sbjct: 205 SYVKR 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 243 AITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
++ E + Y++ L +++LH ++H D+K N+FL K+GDFGL + G
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI G+ YL +HRDL N + N +VKIGDFG++
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
QI +G+ YL + +++HRDL N+ + VKI DFGLA +E D
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
R+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFGLA
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ + G+ YL D +HRDL N+ + N V K+ DFGL+ +E D
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + S DVWS G +M+ +L G+ P+ T ++ S +++ Y+LPA +
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYRLPAPMG 278
Query: 170 KPAATMIKKMLL----LDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
P A + +++L D QRP +Q++ P SL A+ ++
Sbjct: 279 CPHA--LHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATVS 325
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ + G+ YL D +HRDL N+ + N V K+ DFGL+ +E D
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE + S DVWS G +M+ +L G+ P+ T ++ S +++ Y+LPA +
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYRLPAPMG 278
Query: 170 KPAATMIKKMLL----LDPVQRPPVAQLLHFEFFNDYCPTSLPASCLMT 214
P A + +++L D QRP +Q++ P SL A+ ++
Sbjct: 279 CPHA--LHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATVS 325
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
N+ GT +Y++PE L +S + D+WS+G + + VG+ P + + + + + ++Y
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGS--GSMAIFELLDY 237
Query: 163 -------KLPATL-KKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
KLP+ + + K L+ +P +R + QL+ F
Sbjct: 238 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 174
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Q+ +G+++L IHRDL N+ L+ + KI DFGLA I+ D
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++FE DVWS G ++ L +G P+ + + ++ K +++ +
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 288
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQLLHF 196
PA ++K DP++RP Q++
Sbjct: 289 APAEMYDIMKTCWDADPLKRPTFKQIVQL 317
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Q+ +G+++L IHRDL N+ L+ + KI DFGLA I+ D
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++FE DVWS G ++ L +G P+ + + ++ K +++ +
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 295
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQLLHF 196
PA ++K DP++RP Q++
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQL 324
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
++ I G+ YL + +HRDL N+ ++ N V K+ DFGL+ +E
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 167
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 51 LEEMS----DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
L EMS D AA+ ++ S V +G L ++SS D T L K +
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS-----DPTYTSSLGGKIPI- 185
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLP 165
+ APE + + D WS G +M+ ++ G+ P+ + ++ + I++ +Y+LP
Sbjct: 186 ---RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLP 241
Query: 166 ATLKKPAATMIKKMLLLDPVQR 187
P + L+LD Q+
Sbjct: 242 PPPDCPTSL---HQLMLDCWQK 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Q+ +G+++L IHRDL N+ L+ + KI DFGLA I+ D
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++FE DVWS G ++ L +G P+ + + ++ K +++ +
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 272
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQLLHF 196
PA ++K DP++RP Q++
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQL 301
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
Q+ +G+++L IHRDL N+ L+ + KI DFGLA I+ D
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE + ++FE DVWS G ++ L +G P+ + + ++ K +++ +
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 290
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQLLHF 196
PA ++K DP++RP Q++
Sbjct: 291 APAEMYDIMKTCWDADPLKRPTFKQIVQL 319
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ + G+ YL + IHR+L N+ + +N+V KI DFGL+
Sbjct: 144 FAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
Y QI +G+ YL + IHR+L N+ + + VKIGDFGL
Sbjct: 120 YTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV 140
+ APE L ++ S DVWS G ++Y L
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
++ I G+ YL + +HRDL N+ ++ N V K+ DFGL+ +E
Sbjct: 124 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 169
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 51 LEEMS----DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLC 106
L EMS D AA+ ++ S V +G L ++SS D T L K +
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS-----DPTETSSLGGKIPI- 187
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLP 165
+ APE + + D WS G +M+ ++ G+ P+ + ++ + I++ +Y+LP
Sbjct: 188 ---RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLP 243
Query: 166 ATLKKPAATMIKKMLLLDPVQR 187
P + L+LD Q+
Sbjct: 244 PPPDCPTSL---HQLMLDCWQK 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRI-KKVE 161
N GT +Y++PE L +S + D+WS+G + + VG+ P + E I +
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPP 223
Query: 162 YKLP-ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFF 199
KLP A + K L+ +P +R + QL+ F
Sbjct: 224 PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 262
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI------EFDGQR 303
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++ EF G R
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR 170
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 99 LANKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIK 158
L GT Y APE +++ ++ D++++ C++Y L G PP++ L + I
Sbjct: 189 LTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHIN 248
Query: 159 KVEYKLPATLK 169
+ P+T++
Sbjct: 249 QA-IPRPSTVR 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S VK+GDFGL+ +E
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 162
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC---RKRSMMELYNSACDLEEMSDPAA 59
QE R H ++V ++ V+II+ELC RS +++ + DL + A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 60 QPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMI-----MLANKNTL 105
Q +S + Y + F ++ L + V D L+R + A+K L
Sbjct: 119 Q----LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 106 CGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +L
Sbjct: 175 --PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL 231
Query: 165 PATLKKPAA--TMIKKMLLLDPVQRPPVAQL 193
P P +++ K DP +RP +L
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 81 LNDDSSGVMFND--LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIM 135
L +D V +D L+R ++ + + G+ + PE+L + S + D+W+ G +M
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 136 YTLL-VGKPPFETSTLKETYSRIKK 159
+ + +GK P+E T ET I +
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ T+ T +Y PE++ + G + DVWSIGCI++ G F+T +E ++K+
Sbjct: 204 HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 263
Query: 161 EYKLPATL 168
+P+ +
Sbjct: 264 LGPIPSHM 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ T+ T +Y PE++ + G + DVWSIGCI++ G F+T +E ++K+
Sbjct: 195 HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 254
Query: 161 EYKLPATL 168
+P+ +
Sbjct: 255 LGPIPSHM 262
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 101 NKNTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
+ T+ T +Y PE++ + G + DVWSIGCI++ G F+T +E ++K+
Sbjct: 227 HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 286
Query: 161 EYKLPATL 168
+P+ +
Sbjct: 287 LGPIPSHM 294
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI-EFD 300
+A+T + + QI +G+ YL + ++HRDL N+ +++ +KI DFGL+ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 301 GQRKR 305
KR
Sbjct: 205 SXVKR 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 253 MKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFD 300
++ I G+ YL D +HR L N+ ++ N V K+ DFGL+ +E D
Sbjct: 115 LRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIMLANKNTLCGTPNYIAPEIL 117
AA+ ++ S V +G L DD+S D T L K + + APE +
Sbjct: 136 AARNILVNSNLVCKVSDFGLSRFLEDDTS-----DPTYTSALGGKIPI----RWTAPEAI 186
Query: 118 NKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLKKPAATMI 176
+ DVWS G +M+ ++ G+ P+ T ++ + I++ +Y+LP + P+A
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLPPPMDCPSAL-- 243
Query: 177 KKMLLLDPVQ-----RPPVAQLLH 195
L+LD Q RP Q+++
Sbjct: 244 -HQLMLDCWQKDRNHRPKFGQIVN 266
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 254 KQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
K + E + YL + +HRDL N ++D VVK+ DFGL+
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 114 PEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKK 159
PE+L + S + D+W+ G +M+ + +GK P+E T ET I +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE L + S + DVWS G +++ + G+ P+ LK+ R++K YK+ A
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDG 229
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQL 193
P A ++K LD RP QL
Sbjct: 230 CPPAVYEVMKNCWHLDAAMRPSFLQL 255
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ E + YL + +HRDL N+ +S++ V K+ DFGL
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIE 298
Y Q+ ++YL + +HRD+ N+ +S VK+GDFGL+ +E
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 542
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKLPATLK 169
++APE +N + DVW G M+ +L+ G PF+ + RI+ E +LP
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPN 616
Query: 170 KPAA--TMIKKMLLLDPVQRPPVAQL 193
P +++ K DP +RP +L
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII+E ++++ Y C+ +E+S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII+E ++++ Y C+ +E+S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 107 GTPNYIAPEILNKN-GHSFEVDVWSIGCIMYTLLVGKPPF 145
GTP + APE+L K + +D+WS G I +LL G+ PF
Sbjct: 208 GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 248 ETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIG--DFGLA 294
E R YM + + + +H I+HRD+K N FL + + K DFGLA
Sbjct: 118 EVREYMLNLFKALKRIHQFGIVHRDVKPSN-FLYNRRLKKYALVDFGLA 165
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL +HRDL N + VVKIGDFG++ I
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL +HRDL N + VVKIGDFG++ I
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 110 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 121
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 122 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 236
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
Q+ G+ YL +HRDL N + VVKIGDFG++ I
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 210
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 211 TVYTDFDGTR 220
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 271
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 272 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 121
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 122 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 236
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII+E ++++ Y C+ +E+S
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYM 114
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 115 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ + Y ++K +Y++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRM 229
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE L + S + DVWS G +++ + G+ P+ LK+ R++K YK+ A
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDG 238
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQL 193
P A ++K LD RP QL
Sbjct: 239 CPPAVYEVMKNCWHLDAAMRPSFLQL 264
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ E + YL + +HRDL N+ +S++ V K+ DFGL
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 164 TVYTDFDGTR 173
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 224
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 225 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 117
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 118 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 232
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE L + S + DVWS G +++ + G+ P+ LK+ R++K YK+ A
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDG 223
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQL 193
P A ++K LD RP QL
Sbjct: 224 CPPAVYEVMKNCWHLDAAMRPSFLQL 249
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ E + YL + +HRDL N+ +S++ V K+ DFGL
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 197 TVYTDFDGTR 206
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 114
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 115 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ + Y ++K +Y++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRM 229
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQ 302
+ EG+++L H+ IHRDL N + + VK+ DFG+ R D Q
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGM-TRYVLDDQ 158
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 93 LTRMIMLANKNTLCGTP---NYIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETS 148
+TR ++ + GT + APE+ + +S + DVW+ G +M+ + +GK P++
Sbjct: 150 MTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY 209
Query: 149 TLKETYSRIKK 159
T E ++ +
Sbjct: 210 TNSEVVLKVSQ 220
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII+E ++++ Y C+ +E++
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYM 121
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 122 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 236
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 114
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-LNDDSSGVMFNDLTRMIMLANKNTLCGTP------- 109
A Q +S ++Y +K F ++ L + V N L ++ + G
Sbjct: 115 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGA 170
Query: 110 ----NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ + Y ++K +Y++
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRM 229
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 197 TVYTDFDGTR 206
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 196 TVYTDFDGTR 205
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 256
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 197 TVYTDFDGTR 206
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 258 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+M I G+ YL + +HRDL N L D+ V + DFGL+ +I
Sbjct: 152 FMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 196 TVYTDFDGTR 205
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 196 TVYTDFDGTR 205
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 197 TVYTDFDGTR 206
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 258 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
R+ ++ + QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEY 162
N+ GT +Y++PE L +S + D+WS+G + + VG+ P KE +
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE 220
Query: 163 KLPATLKKPAATM------------IKKMLLLDPVQRPPVAQLLHFEFF 199
L + +P + + K L+ +P +R + QL+ F
Sbjct: 221 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 269
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 162
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 120
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 121 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 235
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 121
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 122 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 236
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 111 YIAPEILNKNGHSFEVDVWSIGCIMYTLL-VGKPPFETSTLKETYSRIKKVEYKLPATLK 169
+ APE L + S + DVWS G +++ + G+ P+ LK+ R++K YK+ A
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDG 410
Query: 170 KPAAT--MIKKMLLLDPVQRPPVAQL 193
P A ++K LD RP QL
Sbjct: 411 CPPAVYDVMKNCWHLDAATRPTFLQL 436
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 256 ILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGL 293
+ E + YL + +HRDL N+ +S++ V K+ DFGL
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 196 TVYTDFDGTR 205
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 257 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 184 TVYTDFDGTR 193
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 244
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 245 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 118
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 119 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 233
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 210
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 211 TVYTDFDGTR 220
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 271
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 272 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 182
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 183 TVYTDFDGTR 192
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 243
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 244 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 210
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 211 TVYTDFDGTR 220
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 271
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 272 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 121
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 122 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 236
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 182
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 183 TVYTDFDGTR 192
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 243
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 244 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII+E ++++ Y C+ +E++
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYM 117
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 118 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 232
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 156 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 215
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 216 TVYTDFDGTR 225
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 276
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 277 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 171
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 129
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 130 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 244
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 245 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 116
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 117 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 231
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 143 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 203 TVYTDFDGTR 212
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 263
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 184 TVYTDFDGTR 193
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 244
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 245 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 118
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 119 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 233
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 184 TVYTDFDGTR 193
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 244
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 245 QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 169 TVYTDFDGTR 178
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 229
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI + YL IHRDL N + +N +VK+ DFGL+
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYM 118
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 119 ATQ----ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 233
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 169 TVYTDFDGTR 178
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 229
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 169 TVYTDFDGTR 178
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 229
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 167
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 168 TVYTDFDGTR 177
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 228
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 167
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 168 TVYTDFDGTR 177
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 228
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 255 QILEGVSYLHDHK---IIHRDLKLGNLFL-SDNFVVKIGDFGLAARIE 298
Q +GV+YLH + +IHRDLK NL L + V+KI DFG A I+
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 158
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFE---TSTLKETYSRIKKVEYK 163
G+ ++APE+ + +S + DV+S G I++ ++ + PF+ + ++
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 164 LPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L L KP +++ + DP QRP + +++
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 252 YMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+M I G+ YL IHRDL N L+++ V + DFGL+ +I
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 164 TVYTDFDGTR 173
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 224
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 131 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 184
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 194 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 242 KAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLS-DNFVVKIGDFGLA 294
+ +T+ + RFYM +IL+ + Y H I+HRD+K N+ + ++ +++ D+GLA
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 103 NTLCGTPNYIAPEIL-NKNGHSFEVDVWSIGCIMYTLLVGKPPF 145
N + + PE+L + + + +D+WS+GC++ +++ K PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 131 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 190
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 191 TVYTDFDGTR 200
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 251
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 252 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 107 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 166
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 167 TVYTDFDGTR 176
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 227
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 228 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 241 RKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDN-FVVKIGDFGLAARI-- 297
R A+ E R + Q+LE V + H+ ++HRD+K N+ + N +K+ DFG A +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
Query: 298 ----EFDGQR 303
+FDG R
Sbjct: 164 TVYTDFDGTR 173
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 107 GTPNYIAPEILNKNG-HSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKVEYKLP 165
GT Y PE + + H VWS+G ++Y ++ G PFE I + +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR 224
Query: 166 ATLKKPAATMIKKMLLLDPVQRPPVAQLLHFEFFND 201
+ +I+ L L P RP ++ + + D
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 255 QILEGVSYLHDHK---IIHRDLKLGNLFL-SDNFVVKIGDFGLAARIE 298
Q +GV+YLH + +IHRDLK NL L + V+KI DFG A I+
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 107 GTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFE---TSTLKETYSRIKKVEYK 163
G+ ++APE+ + +S + DV+S G I++ ++ + PF+ + ++
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 164 LPATLKKPAATMIKKMLLLDPVQRPPVAQLL 194
L L KP +++ + DP QRP + +++
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 164
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 171
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 255 QILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
QI +G++YL D +++HRDL N+ + VKI DFG A
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC----------------RKRSMMELY- 45
QE I + H N+V + +YI++EL R ++++++
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 46 NSACDLEEMS-------DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM 98
++A +E + D AA+ + K V +G +++ GV
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVX--------- 268
Query: 99 LANKNTLCGTP-NYIAPEILNKNGHSFEVDVWSIGCIMY-TLLVGKPPFETSTLKETYSR 156
A L P + APE LN +S E DVWS G +++ T +G P+ + ++T
Sbjct: 269 -AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
Query: 157 IKKVEYKLPATLKKPAAT--MIKKMLLLDPVQRP 188
++K +LP P A ++++ +P QRP
Sbjct: 328 VEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRP 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
G+ YL IHRDL N +++ V+KI DFG+ +R E DG
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM-SREEADG 266
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 111 YIAPEILNKNGH-SFEVDVWSIGCIMYTLLVGKPPF 145
Y APE++ N H + VD+WS+GCI +++G+P F
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L++ + R A+ + QI +G+ YL +H ++HR+L N+ L V++ DFG
Sbjct: 119 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 293 LA 294
+A
Sbjct: 179 VA 180
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE 152
N+ GT +Y++PE L +S + D+WS+G + + VG+ P KE
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELCRKRSMMELYNSACDLEEMSDP----- 57
+E A+ + +KH N+V YII E ++++ Y C+ +E+S
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYM 323
Query: 58 AAQPVIWVSKWVDYSDKYGFGYQ-------LNDDSSGVMFND--LTRMIMLANKNTLCGT 108
A Q +S ++Y +K F ++ L ++ V D L+R++ G
Sbjct: 324 ATQ----ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 109 P---NYIAPEILNKNGHSFEVDVWSIGCIMYTLLV-GKPPFETSTLKETYSRIKKVEYKL 164
+ APE L N S + DVW+ G +++ + G P+ L + Y ++K +Y++
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRM 438
Query: 165 --PATLKKPAATMIKKMLLLDPVQRPPVAQL 193
P + +++ +P RP A++
Sbjct: 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLA 294
+ QI + YL IHR+L N + +N +VK+ DFGL+
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 233 LMERNSKRRKAITEPETRFYMKQILEGVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFG 292
L++ + R A+ + QI +G+ YL +H ++HR+L N+ L V++ DFG
Sbjct: 101 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG 160
Query: 293 LA 294
+A
Sbjct: 161 VA 162
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE 152
N+ GT +Y++PE L +S + D+WS+G + + VG+ P KE
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 3 QEIAIHRSLKHRNVVGFHSFFEDSKFVYIILELC----------------RKRSMMELY- 45
QE I + H N+V + +YI++EL R ++++++
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 46 NSACDLEEMS-------DPAAQPVIWVSKWVDYSDKYGFGYQLNDDSSGVMFNDLTRMIM 98
++A +E + D AA+ + K V +G +++ GV
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVY--------- 268
Query: 99 LANKNTLCGTP-NYIAPEILNKNGHSFEVDVWSIGCIMY-TLLVGKPPFETSTLKETYSR 156
A L P + APE LN +S E DVWS G +++ T +G P+ + ++T
Sbjct: 269 -AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
Query: 157 IKKVEYKLPATLKKPAAT--MIKKMLLLDPVQRP 188
++K +LP P A ++++ +P QRP
Sbjct: 328 VEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRP 360
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 259 GVSYLHDHKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDG 301
G+ YL IHRDL N +++ V+KI DFG+ +R E DG
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM-SREEADG 266
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 111 YIAPEI-LNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKETYSRIKKV 160
Y APE+ L ++ +D+WSIGC+ L++GKP F T + RI ++
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 251 FYMKQILEGVSYLHDHKIIHRDLKLGNLFL-SDNFVVKIGDFGLAARI 297
Y+ Q+ V ++H I HRD+K NL + S + +K+ DFG A ++
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 90 FNDLTRMIMLANKNTLCGTPNYIAPEILN-----KNGHSFEVDVWSIGCIMYTLLVGKPP 144
F R++ K+ G Y+APE ++ K + DVWS+G + L G+ P
Sbjct: 169 FGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
Query: 145 FETSTLKETYSRIKKVEYKLPATLKKPAA------TMIKKMLLLDPVQRPPVAQLLHFEF 198
++ K + + KV + P L + +K L D +RP +LL F
Sbjct: 229 YK--NCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
Query: 199 FNDYCPTSLPASCLMTAPRFDSVVPSFNSPRRKP 232
Y + A F V+ SPR P
Sbjct: 287 IKRYETLEVD-----VASWFKDVMAKTESPRSGP 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARIEFDGQRKR 305
I++ + YL + H +IHRD+K N+ L + +K+ DFG++ R+ D + R
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE 152
N+ GT +Y++PE L +S + D+WS+G + + VG+ P KE
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 103 NTLCGTPNYIAPEILNKNGHSFEVDVWSIGCIMYTLLVGKPPFETSTLKE 152
N+ GT +Y++PE L +S + D+WS+G + + VG+ P KE
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 256 ILEGVSYLHD-HKIIHRDLKLGNLFLSDNFVVKIGDFGLAARI 297
+++G++YL + HKI+HRD+K N+ ++ +K+ DFG++ ++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,463,378
Number of Sequences: 62578
Number of extensions: 395098
Number of successful extensions: 3526
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 723
Number of HSP's gapped (non-prelim): 2521
length of query: 305
length of database: 14,973,337
effective HSP length: 98
effective length of query: 207
effective length of database: 8,840,693
effective search space: 1830023451
effective search space used: 1830023451
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)