Query psy620
Match_columns 1290
No_of_seqs 902 out of 4255
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:16:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yo8_A Thrombospondin-2; EGF, 100.0 1E-110 4E-115 1028.3 39.4 523 588-1155 4-566 (634)
2 3fby_A COMP, cartilage oligome 100.0 3E-109 9E-114 974.1 36.7 432 681-1153 26-475 (551)
3 3fby_A COMP, cartilage oligome 100.0 1E-89 3.6E-94 808.2 29.7 341 816-1290 80-449 (551)
4 1yo8_A Thrombospondin-2; EGF, 100.0 4.5E-85 1.5E-89 801.8 33.5 480 626-1290 1-538 (634)
5 1ux6_A Thrombospondin-1; extra 100.0 5E-70 1.7E-74 613.7 20.5 278 854-1155 14-291 (350)
6 1ux6_A Thrombospondin-1; extra 100.0 3.3E-55 1.1E-59 493.6 16.7 244 915-1290 14-263 (350)
7 4fbr_A Lectin, myxobacterial h 99.8 2.3E-23 7.8E-28 230.2 -17.6 192 119-384 5-205 (267)
8 1z1y_A Ookinete surface protei 99.8 1.1E-20 3.8E-25 201.2 0.1 146 110-273 9-174 (186)
9 1z1y_A Ookinete surface protei 99.7 3.7E-19 1.3E-23 189.5 0.3 153 149-332 8-175 (186)
10 2vj3_A Neurogenic locus notch 99.7 4.6E-18 1.6E-22 171.8 8.0 128 142-303 1-132 (135)
11 4fbr_A Lectin, myxobacterial h 99.7 8.4E-21 2.9E-25 209.8 -15.7 193 111-374 37-264 (267)
12 2vj3_A Neurogenic locus notch 99.7 5.5E-17 1.9E-21 163.9 10.4 124 233-390 2-126 (135)
13 2ygq_A WIF-1, WNT inhibitory f 99.6 1.9E-15 6.5E-20 174.3 8.9 157 106-329 149-305 (324)
14 2ygq_A WIF-1, WNT inhibitory f 99.6 2.2E-15 7.6E-20 173.7 8.0 195 111-382 106-309 (324)
15 4d90_A EGF-like repeat and dis 99.6 2.4E-15 8.2E-20 152.9 6.8 109 106-234 1-132 (143)
16 1uzk_A Fibrillin-1; glycoprote 99.6 1.9E-16 6.6E-21 164.8 -1.8 137 104-271 2-156 (162)
17 4d90_A EGF-like repeat and dis 99.5 1.4E-14 4.7E-19 147.3 10.9 124 237-381 1-133 (143)
18 1uzk_A Fibrillin-1; glycoprote 99.5 2.2E-16 7.6E-21 164.3 -2.5 148 145-335 2-162 (162)
19 2bou_A EGF-like module contain 99.5 7E-15 2.4E-19 149.8 5.1 127 192-344 7-142 (143)
20 2bou_A EGF-like module contain 99.5 9E-15 3.1E-19 148.9 5.1 116 152-295 7-143 (143)
21 3fcs_B Integrin beta-3; beta p 99.4 7.3E-14 2.5E-18 174.5 9.1 167 148-380 436-627 (690)
22 2vj2_A Jagged-1; signalling, p 99.4 4.1E-14 1.4E-18 148.4 4.4 153 164-380 14-168 (169)
23 2vj2_A Jagged-1; signalling, p 99.4 5.5E-14 1.9E-18 147.4 3.8 148 125-328 15-165 (169)
24 3fcs_B Integrin beta-3; beta p 99.4 2.5E-13 8.5E-18 169.7 9.6 159 107-328 436-624 (690)
25 1dx5_I Thrombomodulin; serine 99.3 2.3E-13 7.8E-18 134.2 2.2 108 234-374 2-110 (118)
26 2w86_A Fibrillin-1, fibrillin1 99.3 1.1E-13 3.7E-18 141.7 -2.1 134 145-335 3-147 (147)
27 1dx5_I Thrombomodulin; serine 99.3 3.2E-13 1.1E-17 133.2 -0.3 105 145-271 3-112 (118)
28 2w86_A Fibrillin-1, fibrillin1 99.2 8.5E-13 2.9E-17 135.0 -2.0 120 235-379 3-146 (147)
29 1emn_A Fibrillin; extracellula 99.1 2E-11 6.9E-16 112.4 4.6 75 102-180 2-77 (82)
30 1tpg_A T-plasminogen activator 99.1 3.4E-11 1.1E-15 113.2 4.2 81 166-273 1-85 (91)
31 1tpg_A T-plasminogen activator 99.1 8.8E-11 3E-15 110.4 5.9 87 257-384 1-89 (91)
32 1emn_A Fibrillin; extracellula 99.1 1E-10 3.5E-15 107.7 5.6 81 232-334 1-81 (82)
33 3k6s_B Integrin beta-2; cell r 99.1 7.6E-11 2.6E-15 147.0 5.7 143 111-309 434-607 (687)
34 3k6s_B Integrin beta-2; cell r 99.0 1.2E-10 4.3E-15 145.1 6.0 150 150-357 433-607 (687)
35 1x7a_L Coagulation factor IX, 99.0 1.9E-10 6.5E-15 117.6 5.1 81 101-188 44-129 (146)
36 2gy5_A Angiopoietin-1 receptor 99.0 4.5E-10 1.5E-14 133.9 8.5 153 127-380 185-349 (423)
37 1lmj_A Fibrillin 1; EGF, calci 99.0 1.8E-10 6E-15 107.1 3.3 83 235-334 2-85 (86)
38 2c4f_L Coagulation factor VII 99.0 2E-10 6.9E-15 116.9 3.8 87 102-193 44-139 (142)
39 1lmj_A Fibrillin 1; EGF, calci 98.9 1.9E-10 6.6E-15 106.8 1.4 72 104-179 2-79 (86)
40 1x7a_L Coagulation factor IX, 98.9 5.1E-10 1.8E-14 114.4 4.4 83 231-336 43-126 (146)
41 4aqs_A Laminin subunit beta-1; 98.9 2.6E-09 8.9E-14 131.2 10.3 220 119-380 271-524 (525)
42 1aut_L Activated protein C; se 98.9 7.9E-10 2.7E-14 108.2 4.6 100 232-359 2-109 (114)
43 1n7d_A LDL receptor, low-densi 98.9 1.9E-08 6.4E-13 127.7 17.5 179 113-336 182-373 (699)
44 1nfu_B Coagulation factor XA, 98.9 3.6E-10 1.2E-14 120.6 1.0 87 101-197 38-130 (195)
45 1z6c_A Vitamin K-dependent pro 98.8 1E-09 3.5E-14 102.1 3.8 80 235-336 2-85 (87)
46 1aut_L Activated protein C; se 98.8 1.1E-09 3.9E-14 107.0 4.2 87 103-197 4-103 (114)
47 1z6c_A Vitamin K-dependent pro 98.8 9.7E-10 3.3E-14 102.3 3.3 69 104-179 2-74 (87)
48 2vh0_B Activated factor XA lig 98.8 6E-10 2.1E-14 112.2 0.9 86 101-196 38-129 (134)
49 2c4f_L Coagulation factor VII 98.8 1.9E-09 6.3E-14 109.7 3.9 83 142-238 43-132 (142)
50 2gy5_A Angiopoietin-1 receptor 98.8 1.2E-08 4.1E-13 121.6 10.3 138 216-382 184-321 (423)
51 1nfu_B Coagulation factor XA, 98.8 1.5E-09 5.2E-14 115.7 1.7 84 231-336 37-121 (195)
52 3h5c_B Vitamin K-dependent pro 98.7 7.3E-09 2.5E-13 118.8 7.1 79 104-189 4-88 (317)
53 1n7d_A LDL receptor, low-densi 98.7 4.6E-08 1.6E-12 124.2 14.7 138 206-379 225-371 (699)
54 4aqs_A Laminin subunit beta-1; 98.7 7.1E-09 2.4E-13 127.3 6.3 236 156-429 268-523 (525)
55 2w2n_E LDL receptor, low-densi 98.7 2.8E-09 9.4E-14 103.2 2.0 72 290-374 28-99 (107)
56 3m0c_C LDL receptor, low-densi 98.7 1.6E-08 5.4E-13 129.7 8.2 106 207-336 285-391 (791)
57 2vh0_B Activated factor XA lig 98.7 3.2E-09 1.1E-13 106.9 0.8 84 231-336 37-121 (134)
58 2w2n_E LDL receptor, low-densi 98.7 4.9E-09 1.7E-13 101.4 1.9 89 221-334 17-106 (107)
59 3h5c_B Vitamin K-dependent pro 98.6 2.9E-08 9.9E-13 113.9 8.1 86 235-345 4-89 (317)
60 3m0c_C LDL receptor, low-densi 98.4 2E-07 6.8E-12 119.5 8.6 125 141-295 265-396 (791)
61 3p5b_L Low density lipoprotein 98.2 6.7E-07 2.3E-11 105.9 5.7 75 106-185 1-79 (400)
62 3p5b_L Low density lipoprotein 98.2 7E-07 2.4E-11 105.8 5.3 79 237-336 1-79 (400)
63 3v65_B Low-density lipoprotein 98.2 3.5E-07 1.2E-11 107.7 1.0 82 235-336 2-83 (386)
64 3v65_B Low-density lipoprotein 98.1 4.9E-07 1.7E-11 106.5 1.5 79 290-380 2-82 (386)
65 1klo_A Laminin; glycoprotein; 98.1 1.6E-06 5.4E-11 90.1 5.1 30 113-144 2-33 (162)
66 3u7u_G Neuregulin 1; signaling 97.9 2.7E-06 9.4E-11 72.0 2.3 42 141-185 2-49 (55)
67 1edm_B Factor IX; epidermal gr 97.7 1.3E-05 4.3E-10 62.8 2.7 37 145-184 2-38 (39)
68 1edm_B Factor IX; epidermal gr 97.7 1.5E-05 5.3E-10 62.3 2.9 37 104-144 2-38 (39)
69 3u7u_G Neuregulin 1; signaling 97.6 2.2E-05 7.7E-10 66.4 2.9 39 102-144 5-48 (55)
70 1klo_A Laminin; glycoprotein; 97.6 3.6E-05 1.2E-09 79.8 4.8 119 244-380 2-145 (162)
71 2p28_B Integrin beta-2; hybrid 97.6 2.6E-05 9E-10 84.5 3.6 113 242-380 95-213 (217)
72 2p28_B Integrin beta-2; hybrid 97.6 1.8E-05 6.2E-10 85.8 2.1 108 111-273 95-213 (217)
73 2k2s_B Micronemal protein 6; m 97.5 7.2E-06 2.5E-10 70.9 -1.3 45 142-189 7-54 (61)
74 1a3p_A Epidermal growth factor 97.5 5.5E-05 1.9E-09 61.2 2.9 33 594-629 9-44 (45)
75 2k2s_B Micronemal protein 6; m 97.4 1.6E-05 5.5E-10 68.7 -0.5 44 103-150 9-55 (61)
76 1hae_A Heregulin-alpha; growth 97.4 3.2E-05 1.1E-09 67.3 0.7 43 589-635 8-56 (63)
77 1a3p_A Epidermal growth factor 97.3 0.00011 3.8E-09 59.4 3.5 35 106-144 1-40 (45)
78 2wg3_C Hedgehog-interacting pr 97.3 3E-05 1E-09 93.6 -0.2 79 127-235 377-455 (463)
79 1egf_A Epidermal growth factor 97.3 0.00017 5.6E-09 60.6 4.3 37 104-144 2-43 (53)
80 1egf_A Epidermal growth factor 97.2 0.00016 5.6E-09 60.6 3.5 38 145-185 2-44 (53)
81 2wg3_C Hedgehog-interacting pr 97.2 4.9E-05 1.7E-09 91.7 -0.1 78 259-381 378-455 (463)
82 1hae_A Heregulin-alpha; growth 97.1 0.00011 3.6E-09 64.0 1.4 42 106-151 7-54 (63)
83 3ca7_A Protein spitz; argos, E 97.0 5.6E-05 1.9E-09 63.2 -1.6 42 127-185 3-48 (52)
84 3zyj_B Netrin-G1; cell adhesio 97.0 0.00029 9.9E-09 83.0 3.6 97 154-273 299-397 (426)
85 1kli_L Factor VIIA; extrinsic 96.9 0.00032 1.1E-08 62.1 2.0 48 289-345 3-51 (69)
86 2jkh_L Factor X light chain; p 96.9 0.00029 9.9E-09 59.5 1.5 45 292-345 2-46 (55)
87 1k36_A Epiregulin; EGF-like fo 96.8 0.00033 1.1E-08 57.0 1.3 38 104-145 2-43 (46)
88 3zyj_B Netrin-G1; cell adhesio 96.7 0.00062 2.1E-08 80.2 3.4 109 113-256 298-412 (426)
89 3ca7_A Protein spitz; argos, E 96.7 0.00028 9.7E-09 58.9 0.2 32 348-381 14-48 (52)
90 1k36_A Epiregulin; EGF-like fo 96.6 0.0005 1.7E-08 55.9 0.9 37 145-185 2-43 (46)
91 1apq_A Complement protease C1R 96.5 0.0011 3.7E-08 55.1 2.8 44 289-336 2-52 (53)
92 1gl4_A Nidogen-1, entactin; im 96.5 0.00026 8.9E-09 79.0 -1.4 46 670-720 3-48 (285)
93 2kl7_A Fibulin-4; secreted, ca 96.4 0.0014 4.9E-08 58.3 3.1 45 289-335 1-45 (71)
94 1g1s_A P-selectin; selectin, l 96.3 0.00065 2.2E-08 69.7 -0.2 45 585-633 117-161 (162)
95 1kig_L Factor XA; glycoprotein 96.1 0.0018 6.3E-08 53.7 1.8 39 299-345 5-43 (51)
96 1ob1_C Major merozoite surface 96.1 0.0026 8.8E-08 59.7 2.9 68 107-177 6-83 (99)
97 1nql_B Epidermal growth factor 96.1 0.0015 5.1E-08 54.8 1.0 31 111-144 11-43 (53)
98 1nql_B Epidermal growth factor 96.0 0.0026 9E-08 53.3 2.4 33 348-382 12-45 (53)
99 1gl4_A Nidogen-1, entactin; im 96.0 0.00095 3.2E-08 74.5 -0.6 44 144-188 3-48 (285)
100 1n1i_A Merozoite surface prote 95.9 0.0039 1.3E-07 58.8 3.3 67 242-326 15-84 (105)
101 2jkh_L Factor X light chain; p 95.9 0.002 6.9E-08 54.3 1.1 41 147-190 2-46 (55)
102 1g1s_A P-selectin; selectin, l 95.9 0.0018 6.2E-08 66.3 0.8 40 148-190 121-160 (162)
103 2kl7_A Fibulin-4; secreted, ca 95.8 0.0041 1.4E-07 55.3 2.8 68 104-185 2-71 (71)
104 1ob1_C Major merozoite surface 95.8 0.0036 1.2E-07 58.7 2.3 67 242-326 9-83 (99)
105 1kig_L Factor XA; glycoprotein 95.6 0.0048 1.6E-07 51.2 2.3 40 682-726 6-47 (51)
106 1n1i_A Merozoite surface prote 95.5 0.0094 3.2E-07 56.2 4.3 70 105-177 10-84 (105)
107 1kli_L Factor VIIA; extrinsic 95.5 0.0041 1.4E-07 55.0 1.7 48 234-296 3-52 (69)
108 1apq_A Complement protease C1R 95.5 0.0053 1.8E-07 50.9 2.3 38 144-184 2-51 (53)
109 2bz6_L Blood coagulation facto 95.5 0.0037 1.3E-07 52.3 1.3 43 294-345 2-45 (53)
110 2fd6_A Urokinase-type plasmino 95.5 0.011 3.8E-07 58.1 4.8 58 113-185 2-63 (122)
111 2fd6_A Urokinase-type plasmino 94.8 0.031 1.1E-06 55.0 5.7 58 349-429 2-61 (122)
112 3ltf_D Protein spitz; receptor 94.3 0.022 7.4E-07 48.6 2.8 31 349-381 15-48 (58)
113 2wph_E Coagulation factor IXA 94.3 0.022 7.6E-07 48.7 2.9 38 294-336 2-40 (59)
114 3ltf_D Protein spitz; receptor 93.8 0.014 4.8E-07 49.8 0.6 30 112-144 14-47 (58)
115 2bz6_L Blood coagulation facto 93.6 0.017 5.8E-07 48.3 0.8 31 601-632 12-45 (53)
116 1q4g_A Prostaglandin G/H synth 93.0 0.026 8.8E-07 69.3 1.5 37 146-185 2-40 (553)
117 1q4g_A Prostaglandin G/H synth 93.0 0.028 9.6E-07 69.0 1.7 36 105-144 2-39 (553)
118 3nt1_A Prostaglandin-endoperox 92.3 0.047 1.6E-06 67.2 2.5 36 105-144 1-38 (587)
119 3nt1_A Prostaglandin-endoperox 92.2 0.084 2.9E-06 65.0 4.5 38 341-381 1-39 (587)
120 3cfw_A L-selectin; EGF, cell a 91.1 0.053 1.8E-06 55.4 0.9 43 586-632 118-160 (164)
121 1szb_A Mannose binding lectin- 90.9 0.045 1.5E-06 56.6 0.1 48 134-185 113-167 (170)
122 2i9a_A Urokinase-type plasmino 90.7 0.21 7E-06 50.6 4.8 59 111-185 12-75 (145)
123 3cfw_A L-selectin; EGF, cell a 89.7 0.12 4E-06 52.9 2.0 39 149-190 122-160 (164)
124 1szb_A Mannose binding lectin- 89.1 0.13 4.3E-06 53.1 1.8 44 288-336 121-167 (170)
125 2wph_E Coagulation factor IXA 88.4 0.22 7.6E-06 42.4 2.5 36 158-197 11-49 (59)
126 3e50_C Protransforming growth 88.1 0.28 9.5E-06 40.5 2.8 33 111-147 13-47 (50)
127 1nzi_A Complement C1S componen 86.3 0.28 9.7E-06 49.7 2.3 45 288-336 114-158 (159)
128 3f1s_B Vitamin K-dependent pro 86.1 0.38 1.3E-05 53.7 3.5 47 291-345 2-48 (283)
129 3e50_C Protransforming growth 86.0 0.51 1.7E-05 38.9 3.2 31 348-381 14-45 (50)
130 1g1t_A E-selectin; EGF, adhesi 85.6 0.31 1.1E-05 49.1 2.3 37 342-382 120-156 (157)
131 2i9a_A Urokinase-type plasmino 84.9 0.53 1.8E-05 47.6 3.5 30 153-185 14-46 (145)
132 2rnl_A Amphiregulin; AR, color 84.5 0.92 3.1E-05 37.4 4.1 36 342-380 10-48 (50)
133 1iox_A Betacellulin; EGF-like 84.5 0.6 2E-05 38.5 3.0 31 348-381 14-45 (50)
134 2rnl_A Amphiregulin; AR, color 84.3 0.68 2.3E-05 38.2 3.3 36 145-184 8-48 (50)
135 1iox_A Betacellulin; EGF-like 83.7 0.49 1.7E-05 39.0 2.2 30 111-144 13-44 (50)
136 1xdt_R Hbegf, heparin-binding 83.4 0.54 1.9E-05 42.4 2.5 31 348-381 46-77 (79)
137 3v64_C Agrin; beta propeller, 83.4 0.34 1.2E-05 55.7 1.5 40 291-336 1-40 (349)
138 4aqt_A Laminin subunit gamma-1 82.9 0.24 8.3E-06 57.7 0.0 93 215-335 270-365 (375)
139 1g1t_A E-selectin; EGF, adhesi 82.8 0.27 9.1E-06 49.6 0.3 35 106-144 120-154 (157)
140 2ygo_A WIF-1, WNT inhibitory f 81.8 0.77 2.6E-05 48.0 3.3 34 585-626 146-179 (188)
141 1xdt_R Hbegf, heparin-binding 81.5 0.38 1.3E-05 43.4 0.8 31 151-185 45-77 (79)
142 3asi_A Neurexin-1-alpha; beta- 81.3 0.71 2.4E-05 54.3 3.2 36 105-144 185-221 (410)
143 2ygo_A WIF-1, WNT inhibitory f 79.7 0.99 3.4E-05 47.2 3.2 32 342-381 149-180 (188)
144 3asi_A Neurexin-1-alpha; beta- 78.9 0.84 2.9E-05 53.7 2.7 41 142-185 180-222 (410)
145 3v64_C Agrin; beta propeller, 73.4 1.1 3.9E-05 51.3 1.8 33 236-271 1-33 (349)
146 3f1s_B Vitamin K-dependent pro 72.1 2 6.7E-05 47.8 3.3 45 236-295 2-48 (283)
147 4aqt_A Laminin subunit gamma-1 72.0 1.7 5.8E-05 50.7 2.8 55 114-173 257-314 (375)
148 1nzi_A Complement C1S componen 69.5 1.9 6.6E-05 43.4 2.3 37 232-271 113-151 (159)
149 1b9w_A Protein (merozoite surf 69.0 2.5 8.6E-05 39.0 2.6 67 242-326 9-79 (95)
150 2y38_A Laminin subunit alpha-5 68.8 2.1 7.1E-05 50.3 2.6 37 122-158 292-331 (403)
151 3qcw_A Neurexin-1-alpha; synap 64.3 2.6 8.9E-05 56.8 2.6 37 105-145 1017-1054(1245)
152 1apj_A Fibrillin; microfibril, 63.9 0.42 1.4E-05 42.7 -3.5 38 441-486 18-56 (74)
153 3sov_A LRP-6, low-density lipo 63.0 3.6 0.00012 46.5 3.1 41 291-336 267-309 (318)
154 3qcw_A Neurexin-1-alpha; synap 62.7 2.9 0.0001 56.3 2.7 40 143-185 1013-1054(1245)
155 4a0p_A LRP6, LRP-6, low-densit 57.9 3.4 0.00012 51.5 1.8 42 290-336 264-306 (628)
156 1b9w_A Protein (merozoite surf 56.9 6 0.00021 36.5 2.8 69 106-177 5-79 (95)
157 1ijq_A LDL receptor, low-densi 55.7 5.1 0.00017 44.9 2.7 42 290-335 266-315 (316)
158 2y38_A Laminin subunit alpha-5 54.3 6.9 0.00024 45.9 3.5 66 308-380 290-372 (403)
159 3s94_A LRP-6, low-density lipo 53.1 3.6 0.00012 51.1 1.0 42 290-336 577-618 (619)
160 2e26_A Reelin, reeler protein; 32.5 11 0.00036 47.3 0.4 44 320-380 521-564 (725)
161 3s94_A LRP-6, low-density lipo 28.8 26 0.0009 43.3 3.1 42 290-336 271-314 (619)
162 1ksq_A Latent transforming gro 28.4 2.2 7.5E-05 38.2 -4.8 22 465-486 37-60 (75)
163 2p26_A Integrin beta-2; hybrid 28.3 19 0.00066 40.1 1.6 55 113-179 197-265 (280)
164 4a0p_A LRP6, LRP-6, low-densit 26.9 35 0.0012 42.3 3.8 38 341-380 265-305 (628)
165 2p26_A Integrin beta-2; hybrid 26.5 35 0.0012 38.0 3.3 56 316-380 208-274 (280)
166 2e26_A Reelin, reeler protein; 25.6 13 0.00046 46.3 -0.3 44 221-273 521-564 (725)
167 3fl7_A Ephrin receptor; ATP-bi 24.0 26 0.00091 42.6 1.8 57 114-178 252-320 (536)
168 2erf_A Thrombospondin-1; TSP-1 23.8 40 0.0014 35.7 3.0 37 28-68 121-157 (209)
169 1ijq_A LDL receptor, low-densi 23.5 33 0.0011 38.1 2.4 36 146-184 267-315 (316)
170 1za4_A Thrombospondin 1; TSP-1 20.4 63 0.0021 35.3 3.7 37 28-68 131-167 (251)
No 1
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=100.00 E-value=1.1e-110 Score=1028.32 Aligned_cols=523 Identities=50% Similarity=0.954 Sum_probs=489.6
Q ss_pred CCCCCCCCCCCCceeccCCCC-CccccCCCCccCCCccccCCCCcCCCC--CCCCC---ccccCCCCcc---cCCcccee
Q psy620 588 PTCATDNPCFPGVECRDTREG-PRCMRCPDGYVGDGIHCKPGVTCNMRP--CFQGV---QCFDTVFNAS---IRLKVTHV 658 (1290)
Q Consensus 588 ~~C~~~nPC~~g~~C~~~~~g-~~Cg~Cp~G~~Gdg~~C~dideC~~~p--C~~g~---~Cvnt~~g~~---C~~g~~g~ 658 (1290)
.+|+ ++||+++++|+++..+ |+|+.|++||+|++.+|++|+||+.+| |.+++ +|+|+.++|+ |++||+|.
T Consensus 4 DeC~-~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 4 DGCL-SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp CGGG-GCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred cccC-CCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 3565 7999999999999976 999889999999999999999999988 99999 9999998874 67888765
Q ss_pred eecc------cCCccccccchhhcccccCcCCCCCCccCCCCCC----CCCccCCCCCCCCCCCCccC---CCCCCC---
Q psy620 659 VLVR------LDTQEMVRDVNALVDVRATRALKASVRCDDIPEH----PYYRCGSCPEGTTGNGTRCH---DIDEDN--- 722 (1290)
Q Consensus 659 ~~~~------~~~~~~C~di~eC~~~~~~~~C~~~~~C~~~~~~----g~y~C~~C~~Gy~Gng~~C~---~~~~~~--- 722 (1290)
.... ....+.|.+|+||.. ..++|.+++.| ++.. ++|+|. |++||+|+|..|+ +++|++
T Consensus 83 ~c~g~g~~~~~~dg~~C~dideC~~--~~~pC~~~~~C--vnt~~~~~GsY~C~-C~~Gy~GdG~~Ce~d~DiDeC~~~~ 157 (634)
T 1yo8_A 83 QPVGVGLEAAKTEKQVCEPENPCKD--KTHNCHKHAEC--IYLGHFSDPMYKCE-CQTGYAGDGLICGEDSDLDGWPNLN 157 (634)
T ss_dssp CCEESSSHHHHSCCCCEEECCTTTT--TCCCCCTTEEE--EECCTTCSSSEEEE-ECTTEEESSSSEEECTTSSSSCSSC
T ss_pred ccccccccccccCCCcccccccccC--CCcccccCccc--cccccccccceeee-ccCCccccCcccccccCcccccCCC
Confidence 4321 123456999999975 34799999999 4455 899997 9999999999996 666542
Q ss_pred ---------------CCCCCCCCCccCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCC
Q psy620 723 ---------------CVHIPNSGQEDADEDNIGDICDDDADNDGILNPSDNCPYVHNPDQLDSDQDGMRDRRLGDACDNC 787 (1290)
Q Consensus 723 ---------------C~~~p~~~~~d~d~dg~~d~~d~D~D~DG~~d~~~~c~~~~~~~~~D~D~DG~~D~~~~~~~~~~ 787 (1290)
|...+++.|+|.|++|++++|+.|+|+|||+|..++|+..+|+.+.|+|+|||+|
T Consensus 158 ~~C~~~~~y~C~~dnC~~~pns~q~D~D~dG~Gd~Cd~D~D~DGi~d~~d~c~~~~n~~~~D~D~Dgv~D---------- 227 (634)
T 1yo8_A 158 LVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGD---------- 227 (634)
T ss_dssp CTTTTTCSSSCSCCSSTTSCCTTCCCSSCSSSCTTTCSSTTSSSSCTTTCSSTTSCCTTCCCSSSSSSCG----------
T ss_pred CcccCCCCccccccccccccCcccCCcccccccccccccccccCCcccccccccccccccccccCCCCCc----------
Confidence 7788899999999999999999999999999999999998888777777776654
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q psy620 788 PTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQTDTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDS 867 (1290)
Q Consensus 788 ~~~~c~~~~~~~~~D~D~DGi~D~~~~d~~d~c~~~~~~~~~D~D~DG~~D~~d~D~D~DGi~d~~d~c~~~~n~~~~D~ 867 (1290)
++|+||.++|+.|+|+|+|||+|+||.|+|+|||+|..|+||+.+|+.|.|+
T Consensus 228 ----------------------------~~D~cp~~~n~~~~D~D~DG~~D~~d~D~D~DGi~d~~D~cp~~~n~~~~D~ 279 (634)
T 1yo8_A 228 ----------------------------RCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDT 279 (634)
T ss_dssp ----------------------------GGCSSTTSCCTTCCCTTCSSSCGGGCSSTTSSSSCTTTCSSTTSCCTTCCCT
T ss_pred ----------------------------ccccCCCCCCCCccCcCCCCCCCCCCCCCCCCCCCccccCCCCcCCCCCCCC
Confidence 3599999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 868 DHDGIGDACDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGKGDECDPDLDGDGIS 947 (1290)
Q Consensus 868 D~Dg~~D~~d~cp~~~n~~~~D~d~dg~~d~~d~~~D~D~DGi~d~~d~cp~~~n~~~~D~D~Dg~~D~~d~D~D~DGi~ 947 (1290)
|+|||+|++|+||.++|+.|.|+|+||++|+|+..+|+|+|||+|..|+||.++++.|.|+|+|||+|+|+.|+|+|||+
T Consensus 280 D~DGi~D~~D~cp~~~~~~~~D~D~DG~~D~cd~~~D~DgDGi~d~~D~cp~~~~~~~~D~D~DG~~D~cd~D~D~DGv~ 359 (634)
T 1yo8_A 280 DGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPDDDNDGVP 359 (634)
T ss_dssp TCSSSCGGGCSSTTSCCTTCCCTTSSSSCTTTCCCCCTTSSSSCGGGCSSTTSCCTTCCCTTCSSSCTTTCSCTTCSSSC
T ss_pred CCCCCCcccccccccCCCcccccCCCCCCccccCCCCcCcCCCccccccCCCCCCccccccCCCCCcccCCCccCCCCCC
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred CCCccccCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccceeeecCCCCCcCCCCceeeccCCc
Q psy620 948 NDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDVSDVCPNNSLVYRTDFRRYTTVILDPQGTSQIDPHWVIYNHGA 1027 (1290)
Q Consensus 948 d~~d~cp~~~n~~~~D~D~DG~~d~~d~D~D~DGi~d~~d~cp~~~~~~~~d~~~~~~~~~d~~g~~~~d~~~~v~~~g~ 1027 (1290)
|..|+||.++++.|+|+|+||++|+|+.|+|+|||||.+|+||+++.+.+++|+.|++|.|+++|.++.+|+|+++++|.
T Consensus 360 D~~D~cp~~~~~~~~D~D~DG~~d~cd~D~D~DGi~D~~D~cp~~~~~~~~d~~~~~~v~ld~~g~~~i~p~~~~~~~g~ 439 (634)
T 1yo8_A 360 DDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETDFRNFQMVPLDPKGTTQIDPNWVIRHQGK 439 (634)
T ss_dssp GGGCTTTTSCCTTCCCTTCSSSCGGGSSCTTCSSSCGGGCSSTTCTTCCSCCCSSEEEEESSCCSSSCCCCCEEEEGGGT
T ss_pred CccccCCCCCCccccCcCCCCCCCCCCCCCCCCCCccccccCCCcCCcccccccccceEecCCCCCcccCccceeccCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCcccccccccceeeecceeecccCCCCccceEeeeccCCcEEEEeccccceeeeeccccccccCCccEEE
Q psy620 1028 EILQTMNSDPGLAIGQDKFSGVDFEGTFFVDTDIDDDYAGFVFSYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLK 1107 (1290)
Q Consensus 1028 ~~~q~~~~dp~~~~g~~~~~~~d~~g~~~~~~~~d~~~~gfvf~yq~~~~f~~~~~~~~~~~~w~~~~f~~~~~~g~~~~ 1107 (1290)
||+|+|+++|+++||.++|++|+|+|||||++..+++|+||||+||++++|||||||+..|+||+.++|||+|++|||+|
T Consensus 440 ~i~~~~~~~P~~~~~~~~~~~v~~~g~~~v~~~~~dd~~g~~~g~~~~~~fy~~~~~~~~~~y~~~~~f~~~~~~~~~~~ 519 (634)
T 1yo8_A 440 ELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLK 519 (634)
T ss_dssp EEEECSCCSSEEEEEEEEESSEEEEEEEEECCSSCCCEEEEEEEEEETTEEEEEEEESSCEECSCCSSSCCEECSEEEEE
T ss_pred hhheehhcCCcceeccccccceeeeEEEEEecCCCCCceeEEEEEcCCCcEEEEEecccceeeecCCcceEEeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCcccccccccCCCcccccccCCCcCCCcccccCCCCcccC
Q psy620 1108 VVDSATGPGTMLRNSLWHTGDTENQCDLAEPCDPRVQCTNLFPGYRCD 1155 (1290)
Q Consensus 1108 ~~~~~~~~~~~~~~~~w~~~~~~~q~~~~w~~~~~~~~~~~~~~~~~~ 1155 (1290)
+|+|+||||++||++|||++.|.+||++||| ++++++|+....|+|.
T Consensus 520 ~~~s~~~pg~~l~~~~~~~~~~~~~~~~lw~-~~~~~~w~~~~~~~w~ 566 (634)
T 1yo8_A 520 VVNSTTGTGEHLRNALWHTGNTPGQVRTLWH-DPRNIGWKDYTAYRWH 566 (634)
T ss_dssp EEECSSCTTHHHHHHHHSSSCBTTTEEEEEE-CTTCCCCCTTCCEEEE
T ss_pred EeeccCCcchhhhhhccccCCCcchhhhhhc-CCCcCCCcCCccceeE
Confidence 9999999999999999999999999999999 9999999988888876
No 2
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=100.00 E-value=2.8e-109 Score=974.07 Aligned_cols=432 Identities=58% Similarity=1.029 Sum_probs=412.7
Q ss_pred CcCCCCCCccCCCCCCCCCccCCCCCCCCCCCCccC-C--C---------------CCCCCCCCCCCCCccCCCCCCCCc
Q psy620 681 TRALKASVRCDDIPEHPYYRCGSCPEGTTGNGTRCH-D--I---------------DEDNCVHIPNSGQEDADEDNIGDI 742 (1290)
Q Consensus 681 ~~~C~~~~~C~~~~~~g~y~C~~C~~Gy~Gng~~C~-~--~---------------~~~~C~~~p~~~~~d~d~dg~~d~ 742 (1290)
.+||+.++.|+.. ..++|+|. |+.||.|+|..|. + + ...+|+..||++|+|+|+|||+|+
T Consensus 26 ~~~c~~~a~C~~~-~~~~~~c~-C~~G~ag~G~~c~~D~D~DG~pd~~d~C~~~~c~~DnC~~~~n~~Q~D~D~DGigD~ 103 (551)
T 3fby_A 26 PSECHEHADCVLE-RDGSRSCV-CAVGWAGNGILCGRDTDLDGFPDEKLRCPERQCRKDNCVTVPNSGQEDVDRDGIGDA 103 (551)
T ss_dssp BCCCCTTEEEEEC-TTSCEEEE-ECTTEESSSSSCEECTTSSSCCSSCCSSCSGGGSCCSSSSSCCTTCCCTTCSSSCGG
T ss_pred CCCCCCCCeeEeC-CCCCEecC-CCCCCCCCCcccCccCCCCCCcCcccCCCCCCccccCCCCCCCccccccCCCCCCcc
Confidence 4799999999664 57899997 9999999999885 2 1 135788899999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCcCCCCCCCCCC
Q psy620 743 CDDDADNDGILNPSDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPT 822 (1290)
Q Consensus 743 ~d~D~D~DG~~d~~~~c~~~~~~~~~D~D~DG~~D~~~~~~~~~~~~~~c~~~~~~~~~D~D~DGi~D~~~~d~~d~c~~ 822 (1290)
|+.|+|+|||+|..++||+.+++.|.|+|+||+. |++||||.
T Consensus 104 Cd~D~DgDGi~D~~DnCp~~~n~~q~D~D~DGvG--------------------------------------D~~DnCp~ 145 (551)
T 3fby_A 104 CDPDADGDGVPNEKDNCPLVRNPDQRNTDEDKWG--------------------------------------DACDNCRS 145 (551)
T ss_dssp GCTTTTCSSSCGGGCSSSSSCCTTCCCTTCSSSC--------------------------------------GGGCSSTT
T ss_pred CCCCCCCCCCCchhhcCCcccCcccccccCCcCC--------------------------------------CccccCCC
Confidence 9999999999999999999999888888888654 35799999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 823 VPNVDQTDTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTDSNSNHIGDVCDSG 902 (1290)
Q Consensus 823 ~~~~~~~D~D~DG~~D~~d~D~D~DGi~d~~d~c~~~~n~~~~D~D~Dg~~D~~d~cp~~~n~~~~D~d~dg~~d~~d~~ 902 (1290)
++|+.|+|+|+|||+|+||.|+|+|||+|..|+||+++|+.|.|+|+|||+|++|+||.++|+.|.|+|+||++|+|+.+
T Consensus 146 ~~n~~q~DtDgDGiGD~cD~D~DgDGi~d~~DnCP~~~n~~q~DsDgDGvgD~cDnCP~~~np~q~D~DgDg~gD~Cd~~ 225 (551)
T 3fby_A 146 QKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNCPRVPNSDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDSD 225 (551)
T ss_dssp SCCTTCCCTTSSSSCGGGCSSTTCSSSCSTTCSSTTSCCTTCCCTTCSSSCGGGCSCTTSCCTTCCCTTCSSSCTTTCCC
T ss_pred CCCCcccccCCCccccccccCCCCCCCCCccccCCCcCCCccCCCCCCcCCchhccCcccCCccccccCCCcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 903 VDTDHDGVPDPMDNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGT 982 (1290)
Q Consensus 903 ~D~D~DGi~d~~d~cp~~~n~~~~D~D~Dg~~D~~d~D~D~DGi~d~~d~cp~~~n~~~~D~D~DG~~d~~d~D~D~DGi 982 (1290)
+|+|+|||+|..|+||.++|+.|.|+|+|||+|+|+.|+|+|||+|..|+||+++|+.|+|+|+||++|+|+.|+|+|||
T Consensus 226 ~D~DgDGi~D~~D~CP~~~n~~q~D~DgDGigD~cd~D~D~DGv~D~~D~CP~~pn~~q~D~DGDGigD~cd~D~D~DGv 305 (551)
T 3fby_A 226 QDQDGDGHQDSRDNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGDVCQDDFDADKV 305 (551)
T ss_dssp CCTTCSSCCGGGCSSTTSCCTTCCCTTCSSSCTTTCSSSSCSSSCGGGCSSTTSCCTTCCCSSSSSSCSTTTTCTTCSSS
T ss_pred CCCCCCCCCChhhcCCCcCcccccCCCCCCCCCccCCCCCCCCCcCccccCCCCCCCcccccCCCCCCCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccccccceeeecCCCCCcCCCCceeeccCCceEEEeecCCCCcccccccccceeeecceeecccCC
Q psy620 983 PDVSDVCPNNSLVYRTDFRRYTTVILDPQGTSQIDPHWVIYNHGAEILQTMNSDPGLAIGQDKFSGVDFEGTFFVDTDID 1062 (1290)
Q Consensus 983 ~d~~d~cp~~~~~~~~d~~~~~~~~~d~~g~~~~d~~~~v~~~g~~~~q~~~~dp~~~~g~~~~~~~d~~g~~~~~~~~d 1062 (1290)
+|.+|+||+++.+.+++||+|++|.|+|+|++|.+|+|+|+++|+||+|++||||+|+||+++|.+|+|+|||||++..|
T Consensus 306 ~D~~D~CP~~~~~~~tdf~~~~~v~ldp~g~~~~~p~W~v~~~G~ev~Qt~NsdP~l~vg~~~~~~v~f~GTf~Vnt~~D 385 (551)
T 3fby_A 306 VDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGREIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTD 385 (551)
T ss_dssp CGGGCSSTTCSSCCSCCCSSEEEEESSTTCSSCCCCCEEEETTTTEEEECSCCSSEEEEEEEEESSEEEEEEEEECCSSC
T ss_pred CCCCCCCCCCCCCCccccccceeEecCCCCCCCCCCceEEecCCceeeeeecCCCceeeccceecceeEEEEEEecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceEeeeccCCcEEEEeccccceeeeeccccccccCCccEEEEecCCCCCCcccccccccCCCcccccccCCCcCCC
Q psy620 1063 DDYAGFVFSYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHTGDTENQCDLAEPCDPR 1142 (1290)
Q Consensus 1063 ~~~~gfvf~yq~~~~f~~~~~~~~~~~~w~~~~f~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~~~~~~q~~~~w~~~~~ 1142 (1290)
++||||||+||+|++||||||||..|+||+++||||+|++|||||+|+|+||||++|||+|||+++|.+||++||| +|+
T Consensus 386 dDy~GFVfgyq~s~~fY~v~WKq~~Q~yw~~~p~~~~a~~Gi~lk~v~s~tGpg~~l~~alWht~~t~~qv~~Lw~-dp~ 464 (551)
T 3fby_A 386 DDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTESQVRLLWK-DPR 464 (551)
T ss_dssp CCEEEEEEEEEETTEEEEEEEESSCEECSCCSSSCCEECSSCEEEEEECSSCTTHHHHHHHHSSSCBTTTEEEEEE-CTT
T ss_pred CCeEEEEEEecCCCeeEEEEeccCccccccccccccccCCceEEEeecCCCCCchhhhhhhhcCCCCcchhhhhhh-Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 887
Q ss_pred cccccCCCCcc
Q psy620 1143 VQCTNLFPGYR 1153 (1290)
Q Consensus 1143 ~~~~~~~~~~~ 1153 (1290)
+.+|+....|+
T Consensus 465 ~~GW~d~t~Y~ 475 (551)
T 3fby_A 465 NVGWKDKKSYR 475 (551)
T ss_dssp CCCCCTTCEEE
T ss_pred ccCCccccceE
Confidence 77777666555
No 3
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=100.00 E-value=1e-89 Score=808.20 Aligned_cols=341 Identities=47% Similarity=0.762 Sum_probs=293.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q psy620 816 ACDNCPTVPNVDQTDTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTDSNSNHI 895 (1290)
Q Consensus 816 ~~d~c~~~~~~~~~D~D~DG~~D~~d~D~D~DGi~d~~d~c~~~~n~~~~D~D~Dg~~D~~d~cp~~~n~~~~D~d~dg~ 895 (1290)
++||||.++|+.|+|+|+|||+|+|+.|+|+|||+|..|+||+++|+.|+|+|+|||+|++||||.++|+.|.|+|+||+
T Consensus 80 ~~DnC~~~~n~~Q~D~D~DGigD~Cd~D~DgDGi~D~~DnCp~~~n~~q~D~D~DGvGD~~DnCp~~~n~~q~DtDgDGi 159 (551)
T 3fby_A 80 RKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCPLVRNPDQRNTDEDKWGDACDNCRSQKNDDQKDTDQDGR 159 (551)
T ss_dssp SCCSSSSSCCTTCCCTTCSSSCGGGCTTTTCSSSCGGGCSSSSSCCTTCCCTTCSSSCGGGCSSTTSCCTTCCCTTSSSS
T ss_pred cccCCCCCCCccccccCCCCCCccCCCCCCCCCCCchhhcCCcccCcccccccCCcCCCccccCCCCCCCcccccCCCcc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCCCCCC-----------------------CCCCCCCCCCCCCCCC--CCCCCCCCCCC
Q psy620 896 GDVCDSGVDTDHDGVPDPMDNCPKVANP-----------------------NQLDNDRDGKGDECDP--DLDGDGISNDE 950 (1290)
Q Consensus 896 ~d~~d~~~D~D~DGi~d~~d~cp~~~n~-----------------------~~~D~D~Dg~~D~~d~--D~D~DGi~d~~ 950 (1290)
||+|+. |+|+|||.|..|+||.++|+ .|.|+|+||++|+|+. |+|+|||+|..
T Consensus 160 GD~cD~--D~DgDGi~d~~DnCP~~~n~~q~DsDgDGvgD~cDnCP~~~np~q~D~DgDg~gD~Cd~~~D~DgDGi~D~~ 237 (551)
T 3fby_A 160 GDACDD--DIDGDRIRNQADNCPRVPNSDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSR 237 (551)
T ss_dssp CGGGCS--STTCSSSCSTTCSSTTSCCTTCCCTTCSSSCGGGCSCTTSCCTTCCCTTCSSSCTTTCCCCCTTCSSCCGGG
T ss_pred cccccc--CCCCCCCCCccccCCCcCCCccCCCCCCcCCchhccCcccCCccccccCCCcccccCCCCCCCCCCCCCChh
Confidence 999987 55555555555555555554 4555555555555543 89999999999
Q ss_pred ccccCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccceeeecCCCCCcCCCCceeeccCCceEE
Q psy620 951 DNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDVSDVCPNNSLVYRTDFRRYTTVILDPQGTSQIDPHWVIYNHGAEIL 1030 (1290)
Q Consensus 951 d~cp~~~n~~~~D~D~DG~~d~~d~D~D~DGi~d~~d~cp~~~~~~~~d~~~~~~~~~d~~g~~~~d~~~~v~~~g~~~~ 1030 (1290)
|+||.++|+.|+|+|+|||+|+|+.|.|+|||+|..|+||+.+... .+|.+|++.+|.
T Consensus 238 D~CP~~~n~~q~D~DgDGigD~cd~D~D~DGv~D~~D~CP~~pn~~----------q~D~DGDGigD~------------ 295 (551)
T 3fby_A 238 DNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPG----------QEDADRDGVGDV------------ 295 (551)
T ss_dssp CSSTTSCCTTCCCTTCSSSCTTTCSSSSCSSSCGGGCSSTTSCCTT----------CCCSSSSSSCST------------
T ss_pred hcCCCcCcccccCCCCCCCCCccCCCCCCCCCcCccccCCCCCCCc----------ccccCCCCCCCC------------
Confidence 9999999999999999999999999999999999999999655422 335555554442
Q ss_pred EeecCCCCcccccccccceeeecceeecccCCCCccceEeeeccCCcEEEEeccccceeeeeccccccccCCccEEEEec
Q psy620 1031 QTMNSDPGLAIGQDKFSGVDFEGTFFVDTDIDDDYAGFVFSYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVD 1110 (1290)
Q Consensus 1031 q~~~~dp~~~~g~~~~~~~d~~g~~~~~~~~d~~~~gfvf~yq~~~~f~~~~~~~~~~~~w~~~~f~~~~~~g~~~~~~~ 1110 (1290)
+ ..|++++-+.+. +-.+|.++++ ..|+||+| |+|+|+
T Consensus 296 ---------------c-d~D~D~DGv~D~--------------------~D~CP~~~~~--~~tdf~~~-----~~v~ld 332 (551)
T 3fby_A 296 ---------------C-QDDFDADKVVDK--------------------IDVCPENAEV--TLTDFRAF-----QTVVLD 332 (551)
T ss_dssp ---------------T-TTCTTCSSSCGG--------------------GCSSTTCSSC--CSCCCSSE-----EEEESS
T ss_pred ---------------C-CCCCCCCCCCCC--------------------CCCCCCCCCC--Cccccccc-----eeEecC
Confidence 1 137777766653 2248999998 68999998 999999
Q ss_pred CCCCCCcccccccccCCCcccccccCCCc----CCCcccccCCCCcccCCCCCCCcCCCCccceeeeEEEEeeecccccc
Q psy620 1111 SATGPGTMLRNSLWHTGDTENQCDLAEPC----DPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDID 1186 (1290)
Q Consensus 1111 ~~~~~~~~~~~~~w~~~~~~~q~~~~w~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1290)
|+ | .+|+.++|++ .+++|++||+|||+ +|.+.|.||+|+|||+
T Consensus 333 p~---g-------------~~~~~p~W~v~~~G~ev~Qt~NsdP~l~--------vg~~~~~~v~f~GTf~--------- 379 (551)
T 3fby_A 333 PE---G-------------DAQIDPNWVVLNQGREIVQTMNSDPGLA--------VGYTAFNGVDFEGTFH--------- 379 (551)
T ss_dssp TT---C-------------SSCCCCCEEEETTTTEEEECSCCSSEEE--------EEEEEESSEEEEEEEE---------
T ss_pred CC---C-------------CCCCCCceEEecCCceeeeeecCCCcee--------eccceecceeEEEEEE---------
Confidence 98 2 3788888888 88999999999998 5666999999999995
Q ss_pred cccCCCCCCccceeeeeccccchhhchhhhhhhhhhcccccceeeEEEEeecCCcEEEEEeeecccccccccCcceecCC
Q psy620 1187 ECADGRNGGSALLLVRINSQAWTSRELSSWIRILMTTMLDLCSGNVATFYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEP 1266 (1290)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yw~~~~~~~~~~~ 1266 (1290)
|| |+.+|||+||| ||||+|++||||||||++|+|||++||||+|+|
T Consensus 380 ----------------Vn-----------------t~~DdDy~GFV-fgyq~s~~fY~v~WKq~~Q~yw~~~p~~~~a~~ 425 (551)
T 3fby_A 380 ----------------VN-----------------TVTDDDYAGFI-FGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEP 425 (551)
T ss_dssp ----------------EC-----------------CSSCCCEEEEE-EEEEETTEEEEEEEESSCEECSCCSSSCCEECS
T ss_pred ----------------ec-----------------ccCCCCeEEEE-EEecCCCeeEEEEeccCccccccccccccccCC
Confidence 66 34467899988 899999999999999999999999999999999
Q ss_pred ccEEEEEeCCCCCchhhhhcccCC
Q psy620 1267 GIQLKVVDSATGPGTMLRNSLWHT 1290 (1290)
Q Consensus 1267 ~~~~~~~~~~~~~g~~lrn~lw~~ 1290 (1290)
|||||+|+|+||||||||||||||
T Consensus 426 Gi~lk~v~s~tGpg~~l~~alWht 449 (551)
T 3fby_A 426 GIQLKAVKSSTGPGEQLRNALWHT 449 (551)
T ss_dssp SCEEEEEECSSCTTHHHHHHHHSS
T ss_pred ceEEEeecCCCCCchhhhhhhhcC
Confidence 999999999999999999999997
No 4
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=100.00 E-value=4.5e-85 Score=801.75 Aligned_cols=480 Identities=37% Similarity=0.578 Sum_probs=370.0
Q ss_pred cCCCCcCCCCCCCCCccccCCCC---c-ccCCccceeeecccCCccccccchhhcccccCcCCCCCC---ccCCCCCCCC
Q psy620 626 KPGVTCNMRPCFQGVQCFDTVFN---A-SIRLKVTHVVLVRLDTQEMVRDVNALVDVRATRALKASV---RCDDIPEHPY 698 (1290)
Q Consensus 626 ~dideC~~~pC~~g~~Cvnt~~g---~-~C~~g~~g~~~~~~~~~~~C~di~eC~~~~~~~~C~~~~---~C~~~~~~g~ 698 (1290)
++|+||+.+||+++++|+++..+ | .|++||+|- ...|++|+||.. ..+.|.+++ .| +++.++
T Consensus 1 ~DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGd-------g~~CeDiDEC~~--~p~~C~~gg~~~~C--vNt~gs 69 (634)
T 1yo8_A 1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGN-------GTHCEDLDECAL--VPDICFSTSKVPRC--VNTQPG 69 (634)
T ss_dssp ---CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSC-------SSSCCBCCTTTT--SCCCSCCCSSSCCE--EECSSS
T ss_pred CcccccCCCCCCCCCEEecCCCCCeECCcCCCccCCC-------CCCccccccccC--CCCcccCCccccce--eeccCc
Confidence 36899999999999999999854 4 568888652 245899999976 223399998 89 677899
Q ss_pred CccCCCCCCCCCCCC-------------ccCCCCCCC-----CCCCCCCCCccCCCCCCCCccccCCCCCCCCCCCCCCC
Q psy620 699 YRCGSCPEGTTGNGT-------------RCHDIDEDN-----CVHIPNSGQEDADEDNIGDICDDDADNDGILNPSDNCP 760 (1290)
Q Consensus 699 y~C~~C~~Gy~Gng~-------------~C~~~~~~~-----C~~~p~~~~~d~d~dg~~d~~d~D~D~DG~~d~~~~c~ 760 (1290)
|+|.+|++||+|++. .|+++++|. |.+ + -.|..-. +.........|+
T Consensus 70 Y~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~--~------------~~Cvnt~-~~~~GsY~C~C~ 134 (634)
T 1yo8_A 70 FHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHK--H------------AECIYLG-HFSDPMYKCECQ 134 (634)
T ss_dssp EEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCT--T------------EEEEECC-TTCSSSEEEEEC
T ss_pred eecccCCCCcccCccccccccccccCCCcccccccccCCCccccc--C------------ccccccc-cccccceeeecc
Confidence 999779999999864 388777653 321 0 0121100 000011122333
Q ss_pred CCCCCC----CCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 761 YVHNPD----QLDSDQDGMRDRRLGDACDNCPTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQTDTDNDGT 836 (1290)
Q Consensus 761 ~~~~~~----~~D~D~DG~~D~~~~~~~~~~~~~~c~~~~~~~~~D~D~DGi~D~~~~d~~d~c~~~~~~~~~D~D~DG~ 836 (1290)
.++..+ +.++|.|+.++.. ..|... ..+..++++|+.++++.|.|+|+||+
T Consensus 135 ~Gy~GdG~~Ce~d~DiDeC~~~~----------~~C~~~---------------~~y~C~~dnC~~~pns~q~D~D~dG~ 189 (634)
T 1yo8_A 135 TGYAGDGLICGEDSDLDGWPNLN----------LVCATN---------------ATYHCIKDNCPHLPNSGQEDFDKDGI 189 (634)
T ss_dssp TTEEESSSSEEECTTSSSSCSSC----------CTTTTT---------------CSSSCSCCSSTTSCCTTCCCSSCSSS
T ss_pred CCccccCcccccccCcccccCCC----------CcccCC---------------CCccccccccccccCcccCCcccccc
Confidence 333221 2234444443321 112100 02334669999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCC
Q psy620 837 GDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDN 916 (1290)
Q Consensus 837 ~D~~d~D~D~DGi~d~~d~c~~~~n~~~~D~D~Dg~~D~~d~cp~~~n~~~~D~d~dg~~d~~d~~~D~D~DGi~d~~d~ 916 (1290)
+++|+.|+|+|||+|..|+||+.+|+.|.|+|+|||+|++|+||.++|+.|.|+|+||++|+|+. |+|+|||+|..|+
T Consensus 190 Gd~Cd~D~D~DGi~d~~d~c~~~~n~~~~D~D~Dgv~D~~D~cp~~~n~~~~D~D~DG~~D~~d~--D~D~DGi~d~~D~ 267 (634)
T 1yo8_A 190 GDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSV--DIDGDDVFNERDN 267 (634)
T ss_dssp CTTTCSSTTSSSSCTTTCSSTTSCCTTCCCSSSSSSCGGGCSSTTSCCTTCCCTTCSSSCGGGCS--STTSSSSCTTTCS
T ss_pred cccccccccccCCcccccccccccccccccccCCCCCcccccCCCCCCCCccCcCCCCCCCCCCC--CCCCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999986 7778888888777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-------------------------CCCCCCCCCCCCccccCcCCCCCCCCCCCCCCC
Q psy620 917 CPKVANPNQLDNDRDGKGDECD-------------------------PDLDGDGISNDEDNCRLIYNPNQDDSDGDGVGN 971 (1290)
Q Consensus 917 cp~~~n~~~~D~D~Dg~~D~~d-------------------------~D~D~DGi~d~~d~cp~~~n~~~~D~D~DG~~d 971 (1290)
||.++|+.|.|+|+|||+|+|| .|+|+|||+|..|+||.++++.|.|+|+|||+|
T Consensus 268 cp~~~n~~~~D~D~DGi~D~~D~cp~~~~~~~~D~D~DG~~D~cd~~~D~DgDGi~d~~D~cp~~~~~~~~D~D~DG~~D 347 (634)
T 1yo8_A 268 CPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGD 347 (634)
T ss_dssp STTSCCTTCCCTTCSSSCGGGCSSTTSCCTTCCCTTSSSSCTTTCCCCCTTSSSSCGGGCSSTTSCCTTCCCTTCSSSCT
T ss_pred CCCcCCCCCCCCCCCCCCcccccccccCCCcccccCCCCCCccccCCCCcCcCCCccccccCCCCCCccccccCCCCCcc
Confidence 7777777777777777666655 299999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccccccccceeeecCCCCCcCCCCceeeccCCceEEEeecCCCCcccccccccceee
Q psy620 972 VCDKDFDKDGTPDVSDVCPNNSLVYRTDFRRYTTVILDPQGTSQIDPHWVIYNHGAEILQTMNSDPGLAIGQDKFSGVDF 1051 (1290)
Q Consensus 972 ~~d~D~D~DGi~d~~d~cp~~~~~~~~d~~~~~~~~~d~~g~~~~d~~~~v~~~g~~~~q~~~~dp~~~~g~~~~~~~d~ 1051 (1290)
+|+.|+|+|||+|..|+||..+... .+|.++++..+ .+. .|+
T Consensus 348 ~cd~D~D~DGv~D~~D~cp~~~~~~----------~~D~D~DG~~d---------------------------~cd-~D~ 389 (634)
T 1yo8_A 348 ACDPDDDNDGVPDDRDNCRLVFNPD----------QEDLDGDGRGD---------------------------ICK-DDF 389 (634)
T ss_dssp TTCSCTTCSSSCGGGCTTTTSCCTT----------CCCTTCSSSCG---------------------------GGS-SCT
T ss_pred cCCCccCCCCCCCccccCCCCCCcc----------ccCcCCCCCCC---------------------------CCC-CCC
Confidence 9999999999999999999765432 23444444333 111 366
Q ss_pred ecceeecccCCCCccceEeeeccCCcEEEEeccccceeeeeccccccccCCccEEEEecCCCCCCcccccccccCCCccc
Q psy620 1052 EGTFFVDTDIDDDYAGFVFSYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHTGDTEN 1131 (1290)
Q Consensus 1052 ~g~~~~~~~~d~~~~gfvf~yq~~~~f~~~~~~~~~~~~w~~~~f~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 1131 (1290)
+|+-+.+. .| .+|.++.. ..++|+.+ +++.|++. | .+
T Consensus 390 D~DGi~D~-~D-------------------~cp~~~~~--~~~d~~~~-----~~v~ld~~---g-------------~~ 426 (634)
T 1yo8_A 390 DNDNIPDI-DD-------------------VCPENNAI--SETDFRNF-----QMVPLDPK---G-------------TT 426 (634)
T ss_dssp TCSSSCGG-GC-------------------SSTTCTTC--CSCCCSSE-----EEEESSCC---S-------------SS
T ss_pred CCCCCccc-cc-------------------cCCCcCCc--cccccccc-----ceEecCCC---C-------------Cc
Confidence 77666553 22 37888877 46778876 78888875 2 25
Q ss_pred ccccCCCc----CCCcccccCCCCcccCCCCCCCcCCCCccceeeeEEEEeeecccccccccCCCCCCccceeeeecccc
Q psy620 1132 QCDLAEPC----DPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGSALLLVRINSQA 1207 (1290)
Q Consensus 1132 q~~~~w~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1207 (1290)
||++.|++ +++.|+||++|+++ +|.+.|.+|+|+|||+ ||+.
T Consensus 427 ~i~p~~~~~~~g~~i~~~~~~~P~~~--------~~~~~~~~v~~~g~~~-------------------------v~~~- 472 (634)
T 1yo8_A 427 QIDPNWVIRHQGKELVQTANSDPGIA--------VGFDEFGSVDFSGTFY-------------------------VNTD- 472 (634)
T ss_dssp CCCCCEEEEGGGTEEEECSCCSSEEE--------EEEEEESSEEEEEEEE-------------------------ECCS-
T ss_pred ccCccceeccCchhhheehhcCCcce--------eccccccceeeeEEEE-------------------------EecC-
Confidence 66777765 57899999999999 6667999999999985 4422
Q ss_pred chhhchhhhhhhhhhcccccceeeEEEEeecCCcEEEEEeeecccccccccCcceecCCccEEEEEeCCCCCchhhhhcc
Q psy620 1208 WTSRELSSWIRILMTTMLDLCSGNVATFYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSL 1287 (1290)
Q Consensus 1208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~g~~lrn~l 1287 (1290)
.+|+|+||| ||||+|++||||||||+.|+||+++||||+|++|||||+|+|+|||||+|||||
T Consensus 473 ----------------~~dd~~g~~-~g~~~~~~fy~~~~~~~~~~y~~~~~f~~~~~~~~~~~~~~s~~~pg~~l~~~~ 535 (634)
T 1yo8_A 473 ----------------RDDDYAGFV-FGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNAL 535 (634)
T ss_dssp ----------------SCCCEEEEE-EEEEETTEEEEEEEESSCEECSCCSSSCCEECSEEEEEEEECSSCTTHHHHHHH
T ss_pred ----------------CCCCceeEE-EEEcCCCcEEEEEecccceeeecCCcceEEeeeeEEEEEeeccCCcchhhhhhc
Confidence 246789977 899999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q psy620 1288 WHT 1290 (1290)
Q Consensus 1288 w~~ 1290 (1290)
|||
T Consensus 536 ~~~ 538 (634)
T 1yo8_A 536 WHT 538 (634)
T ss_dssp HSS
T ss_pred ccc
Confidence 997
No 5
>1ux6_A Thrombospondin-1; extracellular matrix, calcium binding, L-type lectin, glycoprotein, cell adhesion, calcium-binding, heparin- binding; 1.9A {Homo sapiens} SCOP: b.29.1.16 g.75.1.1
Probab=100.00 E-value=5e-70 Score=613.75 Aligned_cols=278 Identities=58% Similarity=1.044 Sum_probs=258.3
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 854 DNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGK 933 (1290)
Q Consensus 854 d~c~~~~n~~~~D~D~Dg~~D~~d~cp~~~n~~~~D~d~dg~~d~~d~~~D~D~DGi~d~~d~cp~~~n~~~~D~D~Dg~ 933 (1290)
.+||+.+||.|.|+|+|||+|+||+|| |+|+|||.|..|+||.++++.|.|+|+||+
T Consensus 14 ~~cp~~~Np~q~D~D~DGvgD~cD~c~-----------------------D~DgDGv~D~~D~CP~~~n~~q~DtD~DG~ 70 (350)
T 1ux6_A 14 DNCPLEHNPDQLDSDSDRIGDTCDNNQ-----------------------DIDEDGHQNNLDNCPYVPNANQADHDKDGK 70 (350)
T ss_dssp HHSBTTTCCSSCCTTSSSBCTTTCCCC-----------------------CTTCSSSCGGGCSSTTSCCTTCCCTTCSSS
T ss_pred HhCCCCCCCCCCCCCCCCCCcccCCCC-----------------------cCCCCCCCCcccCCCCCCCcccCccCCCCC
Confidence 456666666666666666666666654 889999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccceeeecCCCCC
Q psy620 934 GDECDPDLDGDGISNDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDVSDVCPNNSLVYRTDFRRYTTVILDPQGT 1013 (1290)
Q Consensus 934 ~D~~d~D~D~DGi~d~~d~cp~~~n~~~~D~D~DG~~d~~d~D~D~DGi~d~~d~cp~~~~~~~~d~~~~~~~~~d~~g~ 1013 (1290)
+|+||.|+|+|||+|..|+||.++|+.|+|+|+||++|+|+.|+|+|||+|..|+||+++.+..++|+++++|.|+|+|+
T Consensus 71 gD~cd~D~DgDGv~D~~D~CP~~pn~~q~D~DgDGigD~Cd~D~D~DGV~D~~D~CP~~~~~~~~D~~~~~~v~ld~~g~ 150 (350)
T 1ux6_A 71 GDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIPLDPKGT 150 (350)
T ss_dssp CGGGCSSTTCSSSCGGGCTTTTSCCTTCCCTTCSSSCGGGSSCTTCSSSCTTTCSSTTCTTCSSCCTTCCEEEESCSSCC
T ss_pred ccccccCCCCCCCCchhhcCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCcccCCCCCCccccccccCceEEecCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCceEEEeecCCCCcccccccccceeeecceeecccCCCCccceEeeeccCCcEEEEeccccceeeeec
Q psy620 1014 SQIDPHWVIYNHGAEILQTMNSDPGLAIGQDKFSGVDFEGTFFVDTDIDDDYAGFVFSYQSSQKFYVMMWKKNSQVYWQT 1093 (1290)
Q Consensus 1014 ~~~d~~~~v~~~g~~~~q~~~~dp~~~~g~~~~~~~d~~g~~~~~~~~d~~~~gfvf~yq~~~~f~~~~~~~~~~~~w~~ 1093 (1290)
++.+|+|+|++.+.||+|+|+++|++++|.++|+.|+|+|+|+|++..||+|+||||+||++++|||||||+..|+||+.
T Consensus 151 ~~i~p~~~v~~~~~ei~q~l~~dP~i~~gid~~~~VD~~GT~~Vnt~~dDD~~Gfvfgyq~~~~Fyvv~Wk~~~q~yw~~ 230 (350)
T 1ux6_A 151 SQNDPNWVVRHQGKELVQTVNSDPGLAVGYDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDT 230 (350)
T ss_dssp SSCCCCEEC-----CEEECSSCSCEEEEEEEEESSEEEEEEEEECCSSCCCEEEEEEEEEETTEEEEEEEESSCEECSCC
T ss_pred ccccccccccccchhhhhhhhcCCcceeccccccceeeeeeEEecCcCCCCcceEEEEEcCCCeEEEEEeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCccEEEEecCCCCCCcccccccccCCCcccccccCCCcCCCcccccCCCCcccC
Q psy620 1094 TPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHTGDTENQCDLAEPCDPRVQCTNLFPGYRCD 1155 (1290)
Q Consensus 1094 ~~f~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~~~~~~q~~~~w~~~~~~~~~~~~~~~~~~ 1155 (1290)
++||+.+++|||+|+|+|+||||++||++|||+|.+.+|+++||| ++.+.+|+....|+|.
T Consensus 231 ~~f~~~~~~g~~lk~v~s~tgpg~~l~~~lw~Tg~~~~~v~~LW~-d~~~~gW~d~t~y~w~ 291 (350)
T 1ux6_A 231 NPTRAQGYSGLSVKVVKSTTGPGEHLRNALWHTGNTPGQVRTLWH-DPRHIGWKDFTAYRWR 291 (350)
T ss_dssp SSSCCEECSEEEEEEEECSSCTTHHHHHHHHSSSCBTTTEEEEEE-CTTCCCCCTTCEEEEE
T ss_pred CccceeccCceEEEEEeccCCchhhhhhhccccCCcHhHHHHhhc-CCccccccCCccceeE
Confidence 999999999999999999999999999999999999999999999 9988888877777765
No 6
>1ux6_A Thrombospondin-1; extracellular matrix, calcium binding, L-type lectin, glycoprotein, cell adhesion, calcium-binding, heparin- binding; 1.9A {Homo sapiens} SCOP: b.29.1.16 g.75.1.1
Probab=100.00 E-value=3.3e-55 Score=493.60 Aligned_cols=244 Identities=42% Similarity=0.640 Sum_probs=206.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCccccCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 915 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDVSDVCPNN 992 (1290)
Q Consensus 915 d~cp~~~n~~~~D~D~Dg~~D~~d~--D~D~DGi~d~~d~cp~~~n~~~~D~D~DG~~d~~d~D~D~DGi~d~~d~cp~~ 992 (1290)
++||.++||.|.|+|+|||+|+||. |+|+|||+|..|+||.++|+.|.|+|+||++|+|+.|.|+|||+|..|+||..
T Consensus 14 ~~cp~~~Np~q~D~D~DGvgD~cD~c~D~DgDGv~D~~D~CP~~~n~~q~DtD~DG~gD~cd~D~DgDGv~D~~D~CP~~ 93 (350)
T 1ux6_A 14 DNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLV 93 (350)
T ss_dssp HHSBTTTCCSSCCTTSSSBCTTTCCCCCTTCSSSCGGGCSSTTSCCTTCCCTTCSSSCGGGCSSTTCSSSCGGGCTTTTS
T ss_pred HhCCCCCCCCCCCCCCCCCCcccCCCCcCCCCCCCCcccCCCCCCCcccCccCCCCCccccccCCCCCCCCchhhcCCCC
Confidence 5799999999999999999999997 99999999999999999999999999999999999999999999999999966
Q ss_pred CcccccccccceeeecCCCCCcCCCCceeeccCCceEEEeecCCCCcccccccccceeeecceeecccCCCCccceEeee
Q psy620 993 SLVYRTDFRRYTTVILDPQGTSQIDPHWVIYNHGAEILQTMNSDPGLAIGQDKFSGVDFEGTFFVDTDIDDDYAGFVFSY 1072 (1290)
Q Consensus 993 ~~~~~~d~~~~~~~~~d~~g~~~~d~~~~v~~~g~~~~q~~~~dp~~~~g~~~~~~~d~~g~~~~~~~~d~~~~gfvf~y 1072 (1290)
+... .+|.+|++..| .+. .|++|+-+.+. .|
T Consensus 94 pn~~----------q~D~DgDGigD---------------------------~Cd-~D~D~DGV~D~-~D---------- 124 (350)
T 1ux6_A 94 PNPD----------QKDSDGDGRGD---------------------------ACK-DDFDHDSVPDI-DD---------- 124 (350)
T ss_dssp CCTT----------CCCTTCSSSCG---------------------------GGS-SCTTCSSSCTT-TC----------
T ss_pred CCcc----------ccCCCCCCCCC---------------------------CCC-CCcCCCCCCCc-cc----------
Confidence 5522 23555555433 121 26677666543 22
Q ss_pred ccCCcEEEEeccccceeeeeccccccccCCccEEEEecCCCCCCcccccccccCCCcccccccCCCc----CCCcccccC
Q psy620 1073 QSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHTGDTENQCDLAEPC----DPRVQCTNL 1148 (1290)
Q Consensus 1073 q~~~~f~~~~~~~~~~~~w~~~~f~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~~~~~~q~~~~w~~----~~~~~~~~~ 1148 (1290)
.+|.++.. ..++||.+ +++.|+++ | .+||++.|++ +++.|+||+
T Consensus 125 ---------~CP~~~~~--~~~D~~~~-----~~v~ld~~--------------g--~~~i~p~~~v~~~~~ei~q~l~~ 172 (350)
T 1ux6_A 125 ---------ICPENVDI--SETDFRRF-----QMIPLDPK--------------G--TSQNDPNWVVRHQGKELVQTVNS 172 (350)
T ss_dssp ---------SSTTCTTC--SSCCTTCC-----EEEESCSS--------------C--CSSCCCCEEC-----CEEECSSC
T ss_pred ---------CCCCCCcc--ccccccCc-----eEEecCCC--------------c--cccccccccccccchhhhhhhhc
Confidence 37888777 57888876 88999875 2 2577778864 789999999
Q ss_pred CCCcccCCCCCCCcCCCCccceeeeEEEEeeecccccccccCCCCCCccceeeeeccccchhhchhhhhhhhhhcccccc
Q psy620 1149 FPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGSALLLVRINSQAWTSRELSSWIRILMTTMLDLC 1228 (1290)
Q Consensus 1149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1228 (1290)
+|+++ +|.+.|.+|+|+|||. ||+ +.+|||
T Consensus 173 dP~i~--------~gid~~~~VD~~GT~~-------------------------Vnt-----------------~~dDD~ 202 (350)
T 1ux6_A 173 DPGLA--------VGYDEFNAVDFSGTFF-------------------------INT-----------------ERDDDY 202 (350)
T ss_dssp SCEEE--------EEEEEESSEEEEEEEE-------------------------ECC-----------------SSCCCE
T ss_pred CCcce--------eccccccceeeeeeEE-------------------------ecC-----------------cCCCCc
Confidence 99999 6667999999999984 552 335778
Q ss_pred eeeEEEEeecCCcEEEEEeeecccccccccCcceecCCccEEEEEeCCCCCchhhhhcccCC
Q psy620 1229 SGNVATFYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHT 1290 (1290)
Q Consensus 1229 ~~~~~~~~~~~~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~g~~lrn~lw~~ 1290 (1290)
+||| ||||+|++||||||||++|+||+++||||+|++|||||+|+|+||||++||||||||
T Consensus 203 ~Gfv-fgyq~~~~Fyvv~Wk~~~q~yw~~~~f~~~~~~g~~lk~v~s~tgpg~~l~~~lw~T 263 (350)
T 1ux6_A 203 AGFV-FGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVKSTTGPGEHLRNALWHT 263 (350)
T ss_dssp EEEE-EEEEETTEEEEEEEESSCEECSCCSSSCCEECSEEEEEEEECSSCTTHHHHHHHHSS
T ss_pred ceEE-EEEcCCCeEEEEEeeeccccccccCccceeccCceEEEEEeccCCchhhhhhhcccc
Confidence 9988 899999999999999999999999999999999999999999999999999999998
No 7
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.80 E-value=2.3e-23 Score=230.19 Aligned_cols=192 Identities=14% Similarity=0.073 Sum_probs=141.1
Q ss_pred eeecCCCCcccccCCCCccc-CCCCCC-CCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee-ccc------C
Q psy620 119 ECRDTREGPRCMRCPDGYVG-DGIHCK-PGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR-IGG------C 189 (1290)
Q Consensus 119 ~C~~~~g~y~C~~C~~Gy~G-dg~~Ce-dideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-ide------C 189 (1290)
.+.+..++++| .|.+|+.+ -+.+|+ .+.++. .+|.++++|++..++|+| .|++||+|. +|+. +++ |
T Consensus 5 ~~~n~~Gg~s~-~~~pgg~~~~g~~~~~n~~~~~-~~c~ngG~C~~g~~~y~C-~Cp~Gf~G~--~Ce~ni~ec~~~~~c 79 (267)
T 4fbr_A 5 LVQNQWGGSQA-TWNPGGLWLIGARDKQNVVALD-IKSDDGGKTLKGTMTYNG-EGPIGFRGT--LSSANNYTVENQWGG 79 (267)
T ss_dssp EEEEECSSTTS-CCEEEEEEECCCCSSCCEEEEE-EECSSTTSEEEEEEEETT-SCCEEEEEE--ECSTTEEEEEEESSS
T ss_pred eEeecCCcccC-CcCCCCceeeccccccccccCC-CCcCCCCeecCCCCCeEE-eCCCCcccc--cccccccccccccCc
Confidence 46777899999 99999432 115666 344444 489999999999999999 999999998 8887 777 6
Q ss_pred CCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCcc
Q psy620 190 SRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 269 (1290)
Q Consensus 190 ~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G 269 (1290)
.+.||+++ ++|+ .| ..|+..++|. +.||.++++|++...+|+|+ |++||+|
T Consensus 80 ~s~pC~ng--------gtc~-----------------~G--~~c~~~~eC~-s~pC~ngG~C~~~~~sy~C~-C~~Gf~G 130 (267)
T 4fbr_A 80 TSAPWQPG--------GVWV-----------------LG--ARDKQNIVAV-SIKSNDGGKTLTGTTTYNGE-GPIGFKS 130 (267)
T ss_dssp TTSCEEEE--------EEEE-----------------CC--CCSSCCEEEE-EEECSSTTSEEEEEEEETTS-CCEEEEE
T ss_pred CCCcccCC--------Ceee-----------------cc--CccccccccC-CCCCCCCCEEecCCccEEee-CCCCccc
Confidence 66777776 5553 33 5666677898 89999999999999999999 9999999
Q ss_pred CCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCC
Q psy620 270 STGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTR 349 (1290)
Q Consensus 270 ~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~ 349 (1290)
..|+ .++++|+..+ |...+.|.+. . .| |. +..|+.. ++ |. ..+
T Consensus 131 ~~Ce---------------~~~d~C~n~~---~c~s~pC~ng---g----~c---~~----G~~c~~~---i~-c~-~~~ 173 (267)
T 4fbr_A 131 EVTD---------------GDTYSVENQW---GGSAAPWHSG---G----VW---VL----GTRGKQN---VI-NV-DAK 173 (267)
T ss_dssp EECC---------------CCEEEEEEEC---SSTTSCCEEE---E----EE---EC----CSSTTSC---EE-EE-EEE
T ss_pred cCCC---------------CCcccccccC---CcCCccccCC---c----ce---ec----ccccccc---cc-cC-CCC
Confidence 9977 4566655432 3223334321 1 12 21 3345542 22 33 378
Q ss_pred CCCCCeEeeecCCceEEecCCCcccCCCCcCCcCC
Q psy620 350 CDRNAKCTRILGNHYACKCDNGWAGDGQFCGRDTD 384 (1290)
Q Consensus 350 C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~~~d 384 (1290)
|.++|+|++. .++|+|.|++||+| .+|+.+++
T Consensus 174 c~ngg~C~dg-~~~y~C~Cp~Gf~G--~~c~~~i~ 205 (267)
T 4fbr_A 174 SNDGGKTLSG-TMTYNGEGPIGFRG--TLTSPDTY 205 (267)
T ss_dssp CSSTTSEEEE-EEEETTSCCEEEEE--EEEETTEE
T ss_pred CCCCCEeeCC-CCCeEEeCCCCccc--cccccccc
Confidence 9999999987 78999999999999 89986655
No 8
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.78 E-value=1.1e-20 Score=201.21 Aligned_cols=146 Identities=25% Similarity=0.515 Sum_probs=130.5
Q ss_pred CCCCCCCCCeeecCCCCcccccCCCCcccC-CCCCCCCCCCC----CCCCCCCCeeccCC-----CCcccccCCCCCCCC
Q psy620 110 TDNPCFPGVECRDTREGPRCMRCPDGYVGD-GIHCKPGVTCN----MRPCFQGVQCFDTV-----EGYTCGPCPSGYTGD 179 (1290)
Q Consensus 110 ~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gd-g~~CedideC~----~~pC~~gg~C~n~~-----g~y~C~~C~~Gy~Gd 179 (1290)
.++||.++ +|+++.++|+| .|++||+|. +..|+++++|+ .+||.++++|+++. ++|+| .|++||+|.
T Consensus 9 ~~~pC~ng-~C~~~~g~~~C-~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C-~C~~G~~g~ 85 (186)
T 1z1y_A 9 VDTICXNG-QLVQMSNHFXC-MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXC-GCIEGYTLX 85 (186)
T ss_dssp TTCCCBTE-EEEECSSCEEE-EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE-EECTTEEEE
T ss_pred CCCCCCCC-EeECCCCCeEe-ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC-CCCCCCccC
Confidence 48899965 99999999999 999999984 45899999999 78999999999998 89999 999999998
Q ss_pred CCCceecccCCCCCCCCCCCCCCcceeeec----cCCCCCceecCCCCCCCcC---CCCccccC--CccCCCCCC-CCCc
Q psy620 180 GERCQRIGGCSRNPCAQGKLNEKTRCVRCD----DIPEHPYYRCGSCPEGTTG---NGTRCHDI--DECDLAEPC-DPRV 249 (1290)
Q Consensus 180 g~~C~~ideC~~~pC~~g~~~~~~~Cg~C~----~~~~~g~y~C~~C~~Gy~G---dg~~C~di--deC~~~~pC-~~~g 249 (1290)
+..|+ +++|...||.++ ++|+ +.. ++|+| .|++||+| ++..|+++ ++|. .+| .+++
T Consensus 86 ~~~C~-~d~C~~~~C~~~--------g~C~~~~~~~~--g~~~C-~C~~Gy~g~~~~~~~C~~~~~~~C~--~~C~~~~~ 151 (186)
T 1z1y_A 86 EDTCV-LDVCQYXNCGES--------GECIVEYLSEI--QSAGC-SCAIGXVPNPEDEXXCTXTGETACQ--LXCNTDNE 151 (186)
T ss_dssp TTEEE-EGGGTTCCCCTT--------EEEEEEEETTE--EEEEE-EECTEEEEETTTTTEEEEEECCCCC--CCCCTTTE
T ss_pred CCCCC-CCcCcCCCCCCC--------CEEeeCCcCCC--CCceE-ECCCCCcccCCCCCcceEcCCCccc--ccccccCc
Confidence 66676 899999999988 8998 543 58999 99999999 77999865 8996 499 8899
Q ss_pred ccccCCCCeecccCCCCCccCCCC
Q psy620 250 QCTNLFPGYRCDPCPAGFTGSTGV 273 (1290)
Q Consensus 250 ~C~n~~gsy~C~~C~~Gy~G~~Ce 273 (1290)
+|+++.++|+|. |++||+|..++
T Consensus 152 ~C~n~~g~y~C~-C~~G~~g~~~~ 174 (186)
T 1z1y_A 152 VCXNVEGVYXCQ-CMEGFTFDXEX 174 (186)
T ss_dssp EEEEETTEEEEE-ECTTCEEETTT
T ss_pred ceecCCCCeeeE-CCCCCccCccc
Confidence 999999999999 99999999865
No 9
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.72 E-value=3.7e-19 Score=189.47 Aligned_cols=153 Identities=23% Similarity=0.552 Sum_probs=128.6
Q ss_pred CCCCCCCCCCeeccCCCCcccccCCCCCCCC-CCCceecccCC----CCCCCCCCCCCCcceeeeccCCC---CCceecC
Q psy620 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGD-GERCQRIGGCS----RNPCAQGKLNEKTRCVRCDDIPE---HPYYRCG 220 (1290)
Q Consensus 149 C~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd-g~~C~~ideC~----~~pC~~g~~~~~~~Cg~C~~~~~---~g~y~C~ 220 (1290)
+..+||.++ +|+++.++|+| .|++||+|. +..|+++++|. .+||.++ ++|++... .++|+|
T Consensus 8 ~~~~pC~ng-~C~~~~g~~~C-~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~--------~~C~~~~~~~~~g~y~C- 76 (186)
T 1z1y_A 8 TVDTICXNG-QLVQMSNHFXC-MCNEGLVHLSENTCEEXNECXXETLGXACGEF--------GQCIENPDPAQVNMYXC- 76 (186)
T ss_dssp CTTCCCBTE-EEEECSSCEEE-EECTTEEEEETTEEEECCCCSGGGTTSEEETT--------EEEEECSSTTSSCSEEE-
T ss_pred CCCCCCCCC-EeECCCCCeEe-ECCCCCccCCCCccCCCCcccCCCCCCCCCCC--------CEeecCCCCcCCCCEEC-
Confidence 356899865 99999999999 999999985 56799999999 7899999 99998751 158999
Q ss_pred CCCCCCcCCCCccccCCccCCCCCCCCCcccc----cCCCCeecccCCCCCccCCCCccccccccccCCCCcccC--CCC
Q psy620 221 SCPEGTTGNGTRCHDIDECDLAEPCDPRVQCT----NLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDI--DEC 294 (1290)
Q Consensus 221 ~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~----n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~di--deC 294 (1290)
.|++||+|.+..|+ +++|. ..+|.++++|+ ++.++|+|. |++||+|..+ +...|+++ ++|
T Consensus 77 ~C~~G~~g~~~~C~-~d~C~-~~~C~~~g~C~~~~~~~~g~~~C~-C~~Gy~g~~~-----------~~~~C~~~~~~~C 142 (186)
T 1z1y_A 77 GCIEGYTLXEDTCV-LDVCQ-YXNCGESGECIVEYLSEIQSAGCS-CAIGXVPNPE-----------DEXXCTXTGETAC 142 (186)
T ss_dssp EECTTEEEETTEEE-EGGGT-TCCCCTTEEEEEEEETTEEEEEEE-ECTEEEEETT-----------TTTEEEEEECCCC
T ss_pred CCCCCCccCCCCCC-CCcCc-CCCCCCCCEEeeCCcCCCCCceEE-CCCCCcccCC-----------CCCcceEcCCCcc
Confidence 99999999666787 89998 78899999999 888999999 9999998431 23557654 899
Q ss_pred CCCCCCCC-CCCCccccCCCCcEEcCcCcCCccccCCCC
Q psy620 295 ADGRNGGC-DSNSMCTNTEGSFTCTSLCRNSYMVRNVSV 332 (1290)
Q Consensus 295 ~~~~~g~C-~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~ 332 (1290)
.. + | .++++|+++.++|+| .|++||+|.....
T Consensus 143 ~~-~---C~~~~~~C~n~~g~y~C--~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 143 QL-X---CNTDNEVCXNVEGVYXC--QCMEGFTFDXEXN 175 (186)
T ss_dssp CC-C---CCTTTEEEEEETTEEEE--EECTTCEEETTTT
T ss_pred cc-c---ccccCcceecCCCCeee--ECCCCCccCcccc
Confidence 74 3 9 889999999999999 9999999765443
No 10
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.72 E-value=4.6e-18 Score=171.82 Aligned_cols=128 Identities=31% Similarity=0.789 Sum_probs=105.7
Q ss_pred CCCCCCCCC--CCCCCCCCeeccCCCCcccccCCCCCCCCCCCce-ecccCCCCCCCCCCCCCCcceeeeccCCCCCcee
Q psy620 142 HCKPGVTCN--MRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ-RIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYR 218 (1290)
Q Consensus 142 ~CedideC~--~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~-~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~ 218 (1290)
+|+++++|+ .+||.++++|+++.++|+| .|++||+|. .|+ .+++|..+||.++ ++|++.. ++|+
T Consensus 1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C-~C~~Gy~G~--~C~~~~~~C~~~~C~~~--------~~C~~~~--g~~~ 67 (135)
T 2vj3_A 1 SAQDVDECSLGANPCEHAGKCINTLGSFEC-QCLQGYTGP--RCEIDVNECVSNPCQND--------ATCLDQI--GEFQ 67 (135)
T ss_dssp --CCCCTTTSSSCSSSTTCEEEECSSSEEE-ECCTTEEST--TSCEECCTTTTCCCCSS--------CEEEECS--SCEE
T ss_pred CCcccccccCCCCCCCCCCEeECCCCCEEE-ECCCCCcCC--cccccCccCCCCCCCCC--------CEEeCCC--CCce
Confidence 477899999 6899999999999999999 999999998 897 5899999999998 8999875 5899
Q ss_pred cCCCCCCCcCCCCccc-cCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCC
Q psy620 219 CGSCPEGTTGNGTRCH-DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADG 297 (1290)
Q Consensus 219 C~~C~~Gy~Gdg~~C~-dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~ 297 (1290)
| .|++||+| ..|+ ++++|. ..+|.++++|+++.++|+|. |++||+|..|+ ++|++|...
T Consensus 68 C-~C~~G~~G--~~C~~~~~~C~-~~~C~~~g~C~~~~g~~~C~-C~~G~~G~~C~---------------~~i~~C~~~ 127 (135)
T 2vj3_A 68 C-ICMPGYEG--VHCEVNTDECA-SSPCLHNGRCLDKINEFQCE-CPTGFTGHLCQ---------------VDLHHILDA 127 (135)
T ss_dssp E-ECCTTEES--SSSCEECCTTT-TCCSTTTCEEEECSSCEEEE-CCTTEESSSSC---------------EECC-----
T ss_pred e-eCCCCCcC--CcceecCCccc-CCCcCCCCEeECCCCCeEEE-CCCCCcCCccC---------------ccCccccCC
Confidence 9 99999998 8896 789998 78999999999999999999 99999998854 578999877
Q ss_pred CCCCCC
Q psy620 298 RNGGCD 303 (1290)
Q Consensus 298 ~~g~C~ 303 (1290)
.+.|.
T Consensus 128 -~~~c~ 132 (135)
T 2vj3_A 128 -QKMVW 132 (135)
T ss_dssp ------
T ss_pred -Cccee
Confidence 44454
No 11
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.70 E-value=8.4e-21 Score=209.77 Aligned_cols=193 Identities=16% Similarity=0.064 Sum_probs=116.5
Q ss_pred CCCCCCCCeeecCCCCcccccCCCCcccCCCCCC-CCCC------CCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCc
Q psy620 111 DNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK-PGVT------CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERC 183 (1290)
Q Consensus 111 ~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce-dide------C~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C 183 (1290)
..+|.++|+|++...+|+| .|++||+| .+|+ ++++ |.+.||.++++|+ .|. +|
T Consensus 37 ~~~c~ngG~C~~g~~~y~C-~Cp~Gf~G--~~Ce~ni~ec~~~~~c~s~pC~nggtc~---------------~G~--~c 96 (267)
T 4fbr_A 37 DIKSDDGGKTLKGTMTYNG-EGPIGFRG--TLSSANNYTVENQWGGTSAPWQPGGVWV---------------LGA--RD 96 (267)
T ss_dssp EEECSSTTSEEEEEEEETT-SCCEEEEE--EECSTTEEEEEEESSSTTSCEEEEEEEE---------------CCC--CS
T ss_pred CCCcCCCCeecCCCCCeEE-eCCCCccc--ccccccccccccccCcCCCcccCCCeee---------------ccC--cc
Confidence 3589999999999999999 99999998 5676 4555 4444444433332 111 33
Q ss_pred eecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCC----------------------------CCcccc
Q psy620 184 QRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGN----------------------------GTRCHD 235 (1290)
Q Consensus 184 ~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gd----------------------------g~~C~d 235 (1290)
+..++|.+.||.++ ++|++.. .+|+| .|++||+|. |.+|+.
T Consensus 97 ~~~~eC~s~pC~ng--------G~C~~~~--~sy~C-~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~ 165 (267)
T 4fbr_A 97 KQNIVAVSIKSNDG--------GKTLTGT--TTYNG-EGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQ 165 (267)
T ss_dssp SCCEEEEEEECSST--------TSEEEEE--EEETT-SCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTS
T ss_pred ccccccCCCCCCCC--------CEEecCC--ccEEe-eCCCCccccCCCCCcccccccCCcCCccccCCcceeccccccc
Confidence 33334444444444 4444332 24444 444444440 123322
Q ss_pred CCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCc
Q psy620 236 IDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSF 315 (1290)
Q Consensus 236 ideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy 315 (1290)
...|. +.+|.++++|++...+|+|. |++||+|..|+ .++++|.... +-..+.|.+. +.+
T Consensus 166 ~i~c~-~~~c~ngg~C~dg~~~y~C~-Cp~Gf~G~~c~---------------~~i~ec~~~~---~c~~~~c~~g-G~~ 224 (267)
T 4fbr_A 166 NVINV-DAKSNDGGKTLSGTMTYNGE-GPIGFRGTLTS---------------PDTYTVENQW---GGSTAPWNPG-GFW 224 (267)
T ss_dssp CEEEE-EEECSSTTSEEEEEEEETTS-CCEEEEEEEEE---------------TTEEEEEEEC---SCTTSCCEEE-EEE
T ss_pred ccccC-CCCCCCCCEeeCCCCCeEEe-CCCCccccccc---------------cccceeccCC---CccCCcccCC-CeE
Confidence 12232 45677777888777788887 88888877754 4566654431 2223334332 344
Q ss_pred EEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCccc
Q psy620 316 TCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAG 374 (1290)
Q Consensus 316 ~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~G 374 (1290)
.+ .|+.|+.. ..|. .+|.++|+|++. ..+|+|.|++||+|
T Consensus 225 ~~--~C~~g~n~--------------~~c~--~~c~ngGtC~dg-~~sy~CeCp~GF~G 264 (267)
T 4fbr_A 225 MI--GARNGQNV--------------VALN--VASSDGGKTLAG-TMIYNGEGPIGFRA 264 (267)
T ss_dssp EC--CCCTTCCE--------------EEEE--EECSSTTSEEEE-EEEETTSCCEEEEE
T ss_pred EE--ecCCCCcc--------------ccCC--cCCCCCCEeeCC-CcceeecCCCCccc
Confidence 55 56666632 2232 478899999997 78999999999998
No 12
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.68 E-value=5.5e-17 Score=163.86 Aligned_cols=124 Identities=32% Similarity=0.866 Sum_probs=104.0
Q ss_pred cccCCccCC-CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccC
Q psy620 233 CHDIDECDL-AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNT 311 (1290)
Q Consensus 233 C~dideC~~-~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~ 311 (1290)
|++++||.. .++|.++++|+++.++|+|. |++||+|..|+ .++++|...+ |.++++|+++
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~-C~~Gy~G~~C~---------------~~~~~C~~~~---C~~~~~C~~~ 62 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQ-CLQGYTGPRCE---------------IDVNECVSNP---CQNDATCLDQ 62 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEE-CCTTEESTTSC---------------EECCTTTTCC---CCSSCEEEEC
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEE-CCCCCcCCccc---------------ccCccCCCCC---CCCCCEEeCC
Confidence 678999975 57999999999999999999 99999998854 4789998765 9999999999
Q ss_pred CCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCCcCCCCCCCC
Q psy620 312 EGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGRDTDLDGWPD 390 (1290)
Q Consensus 312 ~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~~~d~d~~~~ 390 (1290)
.++|+| .|++||+| ..|+.. +++|. ..+|.++|+|+++ .++|+|.|++||+| ..|+.++ ++|..
T Consensus 63 ~g~~~C--~C~~G~~G----~~C~~~---~~~C~-~~~C~~~g~C~~~-~g~~~C~C~~G~~G--~~C~~~i--~~C~~ 126 (135)
T 2vj3_A 63 IGEFQC--ICMPGYEG----VHCEVN---TDECA-SSPCLHNGRCLDK-INEFQCECPTGFTG--HLCQVDL--HHILD 126 (135)
T ss_dssp SSCEEE--ECCTTEES----SSSCEE---CCTTT-TCCSTTTCEEEEC-SSCEEEECCTTEES--SSSCEEC--C----
T ss_pred CCCcee--eCCCCCcC----Ccceec---CCccc-CCCcCCCCEeECC-CCCeEEECCCCCcC--CccCccC--ccccC
Confidence 999999 99999984 567642 68897 5799999999998 78999999999999 8998544 44544
No 13
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.57 E-value=1.9e-15 Score=174.27 Aligned_cols=157 Identities=31% Similarity=0.868 Sum_probs=78.4
Q ss_pred CCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee
Q psy620 106 PTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
.+| +++|.++|+|.+ .+.| .|++||+| ..|+. +.|. .+|.++++|+. .++| .|++||+|. .|+.
T Consensus 149 ~~C--~~~C~~~G~C~~---~~~C-~C~~G~~G--~~C~~-~~C~-~~C~~~G~C~~---~~~C-~C~~G~~G~--~C~~ 212 (324)
T 2ygq_A 149 AEC--PGGCRNGGFCNE---RRIC-ECPDGFHG--PHCEK-ALCT-PRCMNGGLCVT---PGFC-ICPPGFYGV--NCDK 212 (324)
T ss_dssp CCC--SSCCCSSCEECT---TSCE-ECCTTEES--SSSCE-ESSS-SCCCTTCEECS---SCCE-ECCTTCBTT--TTCB
T ss_pred CCC--CCCCCCCCEECC---CCeE-ECCCCCcC--CCCCC-CCCC-CCCCCCCEEcC---CCEE-eCCCCccCC--Cccc
Confidence 355 478999999986 4799 99999999 78984 4676 48999999986 4789 999999998 8875
Q ss_pred cccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCC
Q psy620 186 IGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPA 265 (1290)
Q Consensus 186 ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~ 265 (1290)
..|. .+|.++ ++|+. .++| .|++||+| ..|+ +++|. .+|.++++|+. .++|. |++
T Consensus 213 -~~C~-~~C~~~--------G~C~~-----~~~C-~C~~G~~G--~~C~-~~~C~--~~C~~~g~C~~---~~~C~-C~~ 267 (324)
T 2ygq_A 213 -ANCS-TTCFNG--------GTCFY-----PGKC-ICPPGLEG--EQCE-ISKCP--QPCRNGGKCIG---KSKCK-CSK 267 (324)
T ss_dssp -CCCS-SCCCSS--------CCBSC-----SSCB-CCCTTCCT--TTTC-------------------------------
T ss_pred -CcCC-CCCCCC--------CeeCC-----CCee-eCCCCccC--CCCC-cCcCC--CcCCCCCEECC---CCEEE-CCC
Confidence 4574 689988 89975 3589 99999999 7897 56784 78999999984 57999 999
Q ss_pred CCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccC
Q psy620 266 GFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRN 329 (1290)
Q Consensus 266 Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~ 329 (1290)
||+|..|+ +++|.. .|.++++|++ .++| .|++||+|..
T Consensus 268 G~~G~~C~-----------------~~~C~~----~C~~~g~C~~---~~~C--~C~~G~~G~~ 305 (324)
T 2ygq_A 268 GYQGDLCS-----------------KPVCEP----GCGAHGTCHE---PNKC--QCQEGWHGRH 305 (324)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCcCCCCc-----------------CCCCCC----CCCCCCEECC---CCEe--ECCCCCcCCC
Confidence 99999865 245653 2888899986 4789 9999998543
No 14
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.56 E-value=2.2e-15 Score=173.72 Aligned_cols=195 Identities=26% Similarity=0.679 Sum_probs=92.2
Q ss_pred CCCCCCCCeeecCC-CCcccccCCCCccc--CC------CCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCC
Q psy620 111 DNPCFPGVECRDTR-EGPRCMRCPDGYVG--DG------IHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGE 181 (1290)
Q Consensus 111 ~~pC~~gg~C~~~~-g~y~C~~C~~Gy~G--dg------~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~ 181 (1290)
..||.++..++... -.+.+ .+..|..- .. ..|.. .+| +++|.++++|.+ .++| .|++||+|.
T Consensus 106 ~~pC~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~C~~-~~C-~~~C~~~G~C~~---~~~C-~C~~G~~G~-- 176 (324)
T 2ygq_A 106 GFPCLGKQDGVAAFEVDVIV-MNSEGNTILKTPQNAIFFKTCQQ-AEC-PGGCRNGGFCNE---RRIC-ECPDGFHGP-- 176 (324)
T ss_dssp ECCBCSSSCEEEEEECEEEE-ECTTCCEEEECCSSCEEEEEECC-CCC-SSCCCSSCEECT---TSCE-ECCTTEESS--
T ss_pred ecccCCCcccccccccceee-ecCCCcEecCCcccccccccccC-CCC-CCCCCCCCEECC---CCeE-ECCCCCcCC--
Confidence 45666655554432 23455 55555421 00 22332 345 368999999986 4899 999999998
Q ss_pred CceecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecc
Q psy620 182 RCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCD 261 (1290)
Q Consensus 182 ~C~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~ 261 (1290)
.|+. +.|. .+|.++ ++|+. .++| .|++||+| ..|+. ..|. .+|.++++|++. ++|.
T Consensus 177 ~C~~-~~C~-~~C~~~--------G~C~~-----~~~C-~C~~G~~G--~~C~~-~~C~--~~C~~~G~C~~~---~~C~ 232 (324)
T 2ygq_A 177 HCEK-ALCT-PRCMNG--------GLCVT-----PGFC-ICPPGFYG--VNCDK-ANCS--TTCFNGGTCFYP---GKCI 232 (324)
T ss_dssp SSCE-ESSS-SCCCTT--------CEECS-----SCCE-ECCTTCBT--TTTCB-CCCS--SCCCSSCCBSCS---SCBC
T ss_pred CCCC-CCCC-CCCCCC--------CEEcC-----CCEE-eCCCCccC--CCccc-CcCC--CCCCCCCeeCCC---Ceee
Confidence 8986 4575 479888 89975 3589 99999999 78973 5674 689999999873 6899
Q ss_pred cCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCC
Q psy620 262 PCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGA 341 (1290)
Q Consensus 262 ~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~i 341 (1290)
|++||+|..|+ +++|.. + |.++++|+. .++| .|++||+| ..|+.
T Consensus 233 -C~~G~~G~~C~-----------------~~~C~~-~---C~~~g~C~~---~~~C--~C~~G~~G----~~C~~----- 276 (324)
T 2ygq_A 233 -CPPGLEGEQCE-----------------ISKCPQ-P---CRNGGKCIG---KSKC--KCSKGYQG----DLCSK----- 276 (324)
T ss_dssp -CCTTCCTTTTC--------------------------------------------------------------------
T ss_pred -CCCCccCCCCC-----------------cCcCCC-c---CCCCCEECC---CCEE--ECCCCCcC----CCCcC-----
Confidence 99999999864 345652 2 988999984 5799 99999985 45653
Q ss_pred CCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCCc
Q psy620 342 DVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGRD 382 (1290)
Q Consensus 342 d~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~~ 382 (1290)
++|. .+|.++|+|++ .++|.|++||+| ..|+..
T Consensus 277 ~~C~--~~C~~~g~C~~----~~~C~C~~G~~G--~~C~~~ 309 (324)
T 2ygq_A 277 PVCE--PGCGAHGTCHE----PNKCQCQEGWHG--RHCNKR 309 (324)
T ss_dssp -----------------------------------------
T ss_pred CCCC--CCCCCCCEECC----CCEeECCCCCcC--CCCCCC
Confidence 5676 67999999986 379999999999 889743
No 15
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.56 E-value=2.4e-15 Score=152.90 Aligned_cols=109 Identities=38% Similarity=0.940 Sum_probs=93.5
Q ss_pred CCCCCCCCCCCCCeeecCC--CCcccccCCCCcccCCCCCCC-------------CCCCCCCCCCCCCeec-------cC
Q psy620 106 PTCATDNPCFPGVECRDTR--EGPRCMRCPDGYVGDGIHCKP-------------GVTCNMRPCFQGVQCF-------DT 163 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~~~--g~y~C~~C~~Gy~Gdg~~Ced-------------ideC~~~pC~~gg~C~-------n~ 163 (1290)
|+|. ++||.++++|++.. ++|+| .|++||+| ..|+. +++|..+||.++++|+ ++
T Consensus 1 d~C~-~~pC~~~g~C~~~~~~g~~~C-~C~~G~~G--~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~ 76 (143)
T 4d90_A 1 DICD-PNPCENGGICLPGLADGSFSC-ECPDGFTD--PNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDT 76 (143)
T ss_dssp --CC-SCCCGGGCEEEC-----CCEE-ECCTTCCT--TTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTE
T ss_pred CcCC-CCcCCCCCEeeCCCCCCCEEe-ECCCCCCC--CCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCC
Confidence 5788 89999999999876 68999 99999998 67764 5778899999999999 77
Q ss_pred CCCcccccCCCCCCCCCCCce-ecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccc
Q psy620 164 VEGYTCGPCPSGYTGDGERCQ-RIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCH 234 (1290)
Q Consensus 164 ~g~y~C~~C~~Gy~Gdg~~C~-~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~ 234 (1290)
.++|+| .|++||+|. .|+ .+++|..+||.++ ++|++.. ++|+| .|++||+| ..|+
T Consensus 77 ~~~~~C-~C~~G~~G~--~C~~~i~~C~~~~C~~~--------~~C~~~~--g~~~C-~C~~G~~G--~~c~ 132 (143)
T 4d90_A 77 FIGYVC-KCPRGFNGI--HCQHNINECEVEPCKNG--------GICTDLV--ANYSC-ECPGEFMG--RNCQ 132 (143)
T ss_dssp ECCEEE-ECCTTEEST--TSCEECCTTTTCCSCTT--------CEEEEET--TEEEE-ECCTTCBS--TTSC
T ss_pred CCCeEe-ECcCCCcCC--CcccCCCcCCCCCCCCC--------CEeECCC--CCeEe-ECCCCCcc--CCce
Confidence 789999 999999988 998 6999999999999 8999875 68999 99999999 6665
No 16
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.55 E-value=1.9e-16 Score=164.76 Aligned_cols=137 Identities=26% Similarity=0.646 Sum_probs=106.1
Q ss_pred cCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccC--CCCCCCCCC--CCCC--CC--CCCCeeccCCC----Cccccc
Q psy620 104 KKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGD--GIHCKPGVT--CNMR--PC--FQGVQCFDTVE----GYTCGP 171 (1290)
Q Consensus 104 ~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gd--g~~Cedide--C~~~--pC--~~gg~C~n~~g----~y~C~~ 171 (1290)
++++|+..+||. +++|+++.++|+| .|++||++. +++|+++++ |... +| .++++|+++.+ +|+| .
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C-~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C-~ 78 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYIC-DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC-C 78 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEE-ECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH-H
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEE-eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee-e
Confidence 579998568997 6899999999999 999999953 589998887 8763 34 35789999877 8999 9
Q ss_pred CCCCCC-CCCCCceecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCC--CCcCC--CCccccCCccCC-CCCC
Q psy620 172 CPSGYT-GDGERCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPE--GTTGN--GTRCHDIDECDL-AEPC 245 (1290)
Q Consensus 172 C~~Gy~-Gdg~~C~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~--Gy~Gd--g~~C~dideC~~-~~pC 245 (1290)
|++||. |. .|+ .|... ..++|+| .|++ ||+++ +..|++|+||.. ..+|
T Consensus 79 C~~G~~~~~--~C~----------------------~C~~~-~~~~y~C-~C~~g~G~~~~~~~~~c~dideC~~~~~~C 132 (162)
T 1uzk_A 79 CSLGKAWGT--PCE----------------------MCPAV-NTSEYKI-LCPGGEGFRPNPITVILEDIDECQELPGLC 132 (162)
T ss_dssp TTTCCEETT--TTE----------------------ECCCT-TSHHHHH-HCTTCTTEEECTTTCCEEECCHHHHCGGGG
T ss_pred CCCCCCcCC--Ccc----------------------cCCCC-CCCCcee-ECCCCCCcccCCCCCccCccccccCCCCCc
Confidence 999998 54 454 13221 2358999 9998 99975 357899999974 3579
Q ss_pred CCCcccccCCCCeecccCCCCCccCC
Q psy620 246 DPRVQCTNLFPGYRCDPCPAGFTGST 271 (1290)
Q Consensus 246 ~~~g~C~n~~gsy~C~~C~~Gy~G~~ 271 (1290)
.+ ++|+++.++|+|. |++||+|..
T Consensus 133 ~~-g~C~n~~gsy~C~-C~~Gy~g~~ 156 (162)
T 1uzk_A 133 QG-GKCINTFGSFQCR-CPTGYYLNE 156 (162)
T ss_dssp BT-SEEEECSSCEEEE-CCTTCCBCT
T ss_pred CC-CEeEcCCCCEEee-CCCCccCCC
Confidence 85 6999999999999 999999976
No 17
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=147.27 Aligned_cols=124 Identities=24% Similarity=0.657 Sum_probs=99.7
Q ss_pred CccCCCCCCCCCcccccCC--CCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccc-----
Q psy620 237 DECDLAEPCDPRVQCTNLF--PGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCT----- 309 (1290)
Q Consensus 237 deC~~~~pC~~~g~C~n~~--gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~----- 309 (1290)
++|. .++|.++++|++.. ++|+|. |++||+|..|+..... ......|.++++|...+ |.++++|+
T Consensus 1 d~C~-~~pC~~~g~C~~~~~~g~~~C~-C~~G~~G~~C~~~~~~---~~~~~~c~~~~~C~~~~---C~~~g~C~~~~~~ 72 (143)
T 4d90_A 1 DICD-PNPCENGGICLPGLADGSFSCE-CPDGFTDPNCSSVVEV---ASDEEEPTSAGPCTPNP---CHNGGTCEISEAY 72 (143)
T ss_dssp --CC-SCCCGGGCEEEC-----CCEEE-CCTTCCTTTTCSCCCC---TTTTTSCCCCCTTSSCC---CCTTCEEEECCCE
T ss_pred CcCC-CCcCCCCCEeeCCCCCCCEEeE-CCCCCCCCCCccCccc---cccccccccCCcCCCCC---CCCCCEecCCCcc
Confidence 4686 88999999999876 689999 9999999998753322 12345677889998765 99999999
Q ss_pred --cCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCC
Q psy620 310 --NTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 310 --n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
++.++|+| .|++||. +..|+.. +++|. .++|.++++|+++ .++|+|.|++||+| .+|+.
T Consensus 73 ~~~~~~~~~C--~C~~G~~----G~~C~~~---i~~C~-~~~C~~~~~C~~~-~g~~~C~C~~G~~G--~~c~~ 133 (143)
T 4d90_A 73 RGDTFIGYVC--KCPRGFN----GIHCQHN---INECE-VEPCKNGGICTDL-VANYSCECPGEFMG--RNCQY 133 (143)
T ss_dssp ETTEECCEEE--ECCTTEE----STTSCEE---CCTTT-TCCSCTTCEEEEE-TTEEEEECCTTCBS--TTSCB
T ss_pred ccCCCCCeEe--ECcCCCc----CCCcccC---CCcCC-CCCCCCCCEeECC-CCCeEeECCCCCcc--CCcee
Confidence 77789999 9999997 5678722 79998 5889999999998 89999999999999 77764
No 18
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.54 E-value=2.2e-16 Score=164.32 Aligned_cols=148 Identities=28% Similarity=0.603 Sum_probs=110.2
Q ss_pred CCCCCCC-CCCCCCCeeccCCCCcccccCCCCCCCC--CCCceeccc--CCCC--CC--CCCCCCCCcceeeeccCCC--
Q psy620 145 PGVTCNM-RPCFQGVQCFDTVEGYTCGPCPSGYTGD--GERCQRIGG--CSRN--PC--AQGKLNEKTRCVRCDDIPE-- 213 (1290)
Q Consensus 145 dideC~~-~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd--g~~C~~ide--C~~~--pC--~~g~~~~~~~Cg~C~~~~~-- 213 (1290)
+|+||+. +||. +++|+++.++|+| .|++||++. +++|+++++ |... +| .++ ++|++...
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C-~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~--------~~C~~~~~~~ 71 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYIC-DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGD--------TACSNEIGVG 71 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEE-ECCTTCEECTTSSBEECCCCEEEEEEC------------------CEEEEEEE
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEE-eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCC--------CcccCCcCCc
Confidence 6899984 8997 6899999999999 999999843 569998776 8653 34 234 67877531
Q ss_pred CCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCC--CCccCCCCccccccccccCCCCcccC
Q psy620 214 HPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPA--GFTGSTGVQGVGLEHAVRFRQTCVDI 291 (1290)
Q Consensus 214 ~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~--Gy~G~~Ce~~~~~~~~~~~~~~C~di 291 (1290)
..+|+| .|++||.. +..|+ .|.. +..++|+|. |++ ||++.. ....|++|
T Consensus 72 ~~~~~C-~C~~G~~~-~~~C~---------~C~~-----~~~~~y~C~-C~~g~G~~~~~------------~~~~c~di 122 (162)
T 1uzk_A 72 VSKASC-CCSLGKAW-GTPCE---------MCPA-----VNTSEYKIL-CPGGEGFRPNP------------ITVILEDI 122 (162)
T ss_dssp ECHHHH-HTTTCCEE-TTTTE---------ECCC-----TTSHHHHHH-CTTCTTEEECT------------TTCCEEEC
T ss_pred ccCcee-eCCCCCCc-CCCcc---------cCCC-----CCCCCceeE-CCCCCCcccCC------------CCCccCcc
Confidence 127999 99999983 13443 1221 356789999 998 999875 33567999
Q ss_pred CCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCC
Q psy620 292 DECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335 (1290)
Q Consensus 292 deC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~ 335 (1290)
+||+.. .+.|.+ ++|+++.++|+| .|++||++...++.|+
T Consensus 123 deC~~~-~~~C~~-g~C~n~~gsy~C--~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 123 DECQEL-PGLCQG-GKCINTFGSFQC--RCPTGYYLNEDTRVCD 162 (162)
T ss_dssp CHHHHC-GGGGBT-SEEEECSSCEEE--ECCTTCCBCTTTCBBC
T ss_pred ccccCC-CCCcCC-CEeEcCCCCEEe--eCCCCccCCCCCCccC
Confidence 999875 456985 799999999999 9999999988777774
No 19
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.50 E-value=7e-15 Score=149.76 Aligned_cols=127 Identities=32% Similarity=0.692 Sum_probs=103.9
Q ss_pred CCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCC-------CCccccCCccCCC--CCCCCCcccccCCCCeeccc
Q psy620 192 NPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGN-------GTRCHDIDECDLA--EPCDPRVQCTNLFPGYRCDP 262 (1290)
Q Consensus 192 ~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gd-------g~~C~dideC~~~--~pC~~~g~C~n~~gsy~C~~ 262 (1290)
++|.++ ++|++ .|+| .|++||+|. +..|+++++|... .+|.++++|+++.++|+|.
T Consensus 7 ~~C~~~--------~~C~~-----~~~C-~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~- 71 (143)
T 2bou_A 7 RWCPQD--------SSCVN-----ATAC-RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCV- 71 (143)
T ss_dssp TTCCTT--------EEESS-----SSCE-EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEE-
T ss_pred CcCCCC--------CEEcC-----CCEE-eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeE-
Confidence 578888 89986 3799 999999985 4789999999843 3899999999999999999
Q ss_pred CCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCC
Q psy620 263 CPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGAD 342 (1290)
Q Consensus 263 C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id 342 (1290)
|++||+|..++... .......|++|+||... .+.|.++++|+++.++|+| .|++||++...++.|+. ++
T Consensus 72 C~~Gy~g~~~~~~~----~~~~~~~C~dideC~~~-~~~C~~~~~C~n~~g~y~C--~C~~Gy~g~~~~~~C~~----~~ 140 (143)
T 2bou_A 72 CSPGYEPVSGAKTF----KNESENTCQDVDECSSG-QHQCDSSTVCFNTVGSYSC--RCRPGWKPRHGIPNNQK----DT 140 (143)
T ss_dssp ECTTEEETTCCSCB----SSGGGCCEEECCHHHHT-CCCCCTTSEEEECSSCEEE--ECCSSSCBCTTCCSSBT----TC
T ss_pred CCCCcccCcCcccc----ccCCCCCcCCccCccCc-CCCCCCCCEEECCCCCEEe--eCCCCcccCCCCccCcc----CC
Confidence 99999998754211 11124578999999864 4569999999999999999 99999999888888877 45
Q ss_pred CC
Q psy620 343 VC 344 (1290)
Q Consensus 343 ~C 344 (1290)
+|
T Consensus 141 ~C 142 (143)
T 2bou_A 141 VC 142 (143)
T ss_dssp CB
T ss_pred cc
Confidence 55
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.50 E-value=9e-15 Score=148.94 Aligned_cols=116 Identities=27% Similarity=0.624 Sum_probs=97.0
Q ss_pred CCCCCCCeeccCCCCcccccCCCCCCCC-------CCCceecccCCCC---CCCCCCCCCCcceeeeccCCCCCceecCC
Q psy620 152 RPCFQGVQCFDTVEGYTCGPCPSGYTGD-------GERCQRIGGCSRN---PCAQGKLNEKTRCVRCDDIPEHPYYRCGS 221 (1290)
Q Consensus 152 ~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd-------g~~C~~ideC~~~---pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~ 221 (1290)
++|.++++|+++ |+| .|++||+|. ++.|+++++|... +|.++ ++|+++. ++|+| .
T Consensus 7 ~~C~~~~~C~~~---~~C-~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~--------~~C~n~~--g~y~C-~ 71 (143)
T 2bou_A 7 RWCPQDSSCVNA---TAC-RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKF--------SDCWNTE--GSYDC-V 71 (143)
T ss_dssp TTCCTTEEESSS---SCE-EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTT--------EEEEECS--SCEEE-E
T ss_pred CcCCCCCEEcCC---CEE-eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCC--------CEEEcCC--CCeEe-E
Confidence 578888888874 788 889988874 4689999999875 89998 8999875 58999 9
Q ss_pred CCCCCcCC----------CCccccCCccCC-CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCccc
Q psy620 222 CPEGTTGN----------GTRCHDIDECDL-AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVD 290 (1290)
Q Consensus 222 C~~Gy~Gd----------g~~C~dideC~~-~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~d 290 (1290)
|++||+|. +..|++++||.. ..+|.++++|+++.++|+|. |++||+|.. ..+.|..
T Consensus 72 C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~-C~~Gy~g~~------------~~~~C~~ 138 (143)
T 2bou_A 72 CSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR-CRPGWKPRH------------GIPNNQK 138 (143)
T ss_dssp ECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE-CCSSSCBCT------------TCCSSBT
T ss_pred CCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee-CCCCcccCC------------CCccCcc
Confidence 99999985 458999999974 47999999999999999999 999999988 3466777
Q ss_pred CCCCC
Q psy620 291 IDECA 295 (1290)
Q Consensus 291 ideC~ 295 (1290)
+++|.
T Consensus 139 ~~~C~ 143 (143)
T 2bou_A 139 DTVCE 143 (143)
T ss_dssp TCCBC
T ss_pred CCccC
Confidence 77663
No 21
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.45 E-value=7.3e-14 Score=174.51 Aligned_cols=167 Identities=25% Similarity=0.576 Sum_probs=132.8
Q ss_pred CCCCCCCCCCCeeccCCCCcc---cccCCCCCCCCCCCcee-c--------ccCCCC----CCCCCCCCCCcceeeeccC
Q psy620 148 TCNMRPCFQGVQCFDTVEGYT---CGPCPSGYTGDGERCQR-I--------GGCSRN----PCAQGKLNEKTRCVRCDDI 211 (1290)
Q Consensus 148 eC~~~pC~~gg~C~n~~g~y~---C~~C~~Gy~Gdg~~C~~-i--------deC~~~----pC~~g~~~~~~~Cg~C~~~ 211 (1290)
+|...||.++++|.+..|.|. | .|++||+|. .|+. + ++|... +|.++ ++|+.
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C-~C~~Gy~G~--~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~--------G~C~~- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVC-RCGPGWLGS--QCECSEEDYRPSQQDECSPREGQPVCSQR--------GECLC- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEE-EECTTCCSS--SSCCSCC------CCCCSSSSSSCGGGGS--------EEECS-
T ss_pred CCcCCCCCCCCcccCCCCeEeCCce-EeCCCccCC--ceeeccCccCCccCCcCCCCCCCCCCCCC--------CEEEC-
Confidence 688899999999998888888 9 999999998 8865 3 568763 48888 89973
Q ss_pred CCCCceecCCCC----CCCcCCCCccc-cCCccCC--CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccC
Q psy620 212 PEHPYYRCGSCP----EGTTGNGTRCH-DIDECDL--AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRF 284 (1290)
Q Consensus 212 ~~~g~y~C~~C~----~Gy~Gdg~~C~-dideC~~--~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~ 284 (1290)
++| .|+ +||+| ..|+ ++.+|.. ..+|.++++|.+ ++|. |++||+|..|+
T Consensus 504 -----g~C-~C~~~~~~Gy~G--~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~-C~~Gy~G~~Ce----------- 559 (690)
T 3fcs_B 504 -----GQC-VCHSSDFGKITG--KYCECDDFSCVRYKGEMCSGHGQCSC----GDCL-CDSDWTGYYCN----------- 559 (690)
T ss_dssp -----SSE-EECCCSSCCCBS--TTSCBCSSCCCBSSSSBGGGSEEEET----TEEE-ECTTEESSSSC-----------
T ss_pred -----Cee-EeecCCCCCeeC--CCcCcccCcCcCCCCCCCCCCCEecC----CeeE-CcCCCcCCCCc-----------
Confidence 489 999 99999 8896 6788972 158999999987 6899 99999999976
Q ss_pred CCCc-ccCCCCCCCCCCCCCCCCccccCCCCcEEcCcC-cCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCC
Q psy620 285 RQTC-VDIDECADGRNGGCDSNSMCTNTEGSFTCTSLC-RNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGN 362 (1290)
Q Consensus 285 ~~~C-~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C-~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~g 362 (1290)
| .++++|.......|.++|+|++ .+| .| ++||+| ..|+. -..|. .+|.++++|++
T Consensus 560 ---C~~~~~~C~~~~g~~C~~~G~C~~----g~C--~C~~~Gy~G----~~Ce~----C~~C~--~~C~~~g~Cv~---- 616 (690)
T 3fcs_B 560 ---CTTRTDTCMSSNGLLCSGRGKCEC----GSC--VCIQPGSYG----DTCEK----CPTCP--DACTFKKECVE---- 616 (690)
T ss_dssp ---EECCCTTTBCTTSSBTSSSCEEET----TEE--ECCSTTCBS----TTSCB----CTTSC--CTTTSCCGGGT----
T ss_pred ---cCCCCCcccCCCCCCCCCCCEEeC----CEE--ECCCCCccC----CCcCc----CCCCC--CCCCCCCCccc----
Confidence 3 3567787531245999999976 289 99 999985 45654 13464 68999999964
Q ss_pred ceEEecCCCcccCCCCcC
Q psy620 363 HYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 363 sy~C~C~~Gy~GdG~~Ce 380 (1290)
|..||+| ..|+
T Consensus 617 -----C~~g~tG--~~C~ 627 (690)
T 3fcs_B 617 -----CKKFDRG--ALHD 627 (690)
T ss_dssp -----TTTTCCS--SSSS
T ss_pred -----CCCCCcc--CCCC
Confidence 9999999 7775
No 22
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.43 E-value=4.1e-14 Score=148.38 Aligned_cols=153 Identities=24% Similarity=0.595 Sum_probs=109.7
Q ss_pred CCCcccccCCCCCCCCCCCceecccCCCC-CCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCC
Q psy620 164 VEGYTCGPCPSGYTGDGERCQRIGGCSRN-PCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLA 242 (1290)
Q Consensus 164 ~g~y~C~~C~~Gy~Gdg~~C~~ideC~~~-pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~ 242 (1290)
...++| .|++||+|. .|+. +|... .|..+ ++|.. ..+| .|++||+| ..|+. .+|.
T Consensus 14 ~~~~~c-~C~~g~~G~--~C~~--~C~~~~~c~~~--------g~C~~-----~g~C-~C~~G~~G--~~C~~-~~C~-- 69 (169)
T 2vj2_A 14 EGRSAV-TCDDYYYGF--GCNK--FCRPRDDFFGH--------YACDQ-----NGNK-TCMEGWMG--PECNR-AICR-- 69 (169)
T ss_dssp --------CCTTEETT--TTCE--ECCCEEETTEE--------EEECS-----SCCE-EECTTEES--TTSCE-ECCC--
T ss_pred ccCeee-eCCCcCcCC--Cccc--ccCCCCCcCCC--------CEeCC-----CCee-ECCCCCcC--CCCCC-CCCC--
Confidence 346788 899999998 6764 45542 46666 78864 3479 99999998 78863 4575
Q ss_pred CCCC-CCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcC
Q psy620 243 EPCD-PRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLC 321 (1290)
Q Consensus 243 ~pC~-~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C 321 (1290)
..|. .++.|++ .|+|. |++||+|..|+ +|... ..|.+ ++|+ ++|+| +|
T Consensus 70 ~~C~~~~g~C~~---~~~C~-C~~G~~G~~C~-------------------~C~~~--~~C~~-g~C~---~~~~C--~C 118 (169)
T 2vj2_A 70 QGCSPKHGSCKL---PGDCR-CQYGWQGLYCD-------------------KCIPH--PGCVH-GICN---EPWQC--LC 118 (169)
T ss_dssp TTCCTTTEECSS---TTCCE-ECTTEESSSSC-------------------EECCC--TTCSS-EECS---STTCC--EE
T ss_pred CCCCCCCcccCC---CCeeE-CCCCCCCCCcc-------------------cCCCC--CCCCC-CCcC---CCCEE--eC
Confidence 4575 5677876 57999 99999998864 24332 13764 4887 57899 99
Q ss_pred cCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcC
Q psy620 322 RNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 322 ~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
++||+| ..|+.. +++|....+|.++|+|+++..++|+|.|++||+| .+|+
T Consensus 119 ~~G~~G----~~C~~~---~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G--~~Ce 168 (169)
T 2vj2_A 119 ETNWGG----QLCDKD---LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSG--PNCE 168 (169)
T ss_dssp CTTEET----TTTCEE---SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCS--TTSC
T ss_pred CCCCCC----CcccCC---CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcC--cCcC
Confidence 999984 568732 6888745789999999986468899999999999 7885
No 23
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.41 E-value=5.5e-14 Score=147.40 Aligned_cols=148 Identities=25% Similarity=0.595 Sum_probs=108.9
Q ss_pred CCcccccCCCCcccCCCCCCCCCCCCCC-CCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCCCCCCC-CCCCCCC
Q psy620 125 EGPRCMRCPDGYVGDGIHCKPGVTCNMR-PCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCSRNPCA-QGKLNEK 202 (1290)
Q Consensus 125 g~y~C~~C~~Gy~Gdg~~CedideC~~~-pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~~~pC~-~g~~~~~ 202 (1290)
..++| .|++||+| ..|+. +|... +|..+++|.. ..+| .|++||+|. .|+. ..|.. .|. .+
T Consensus 15 ~~~~c-~C~~g~~G--~~C~~--~C~~~~~c~~~g~C~~---~g~C-~C~~G~~G~--~C~~-~~C~~-~C~~~~----- 76 (169)
T 2vj2_A 15 GRSAV-TCDDYYYG--FGCNK--FCRPRDDFFGHYACDQ---NGNK-TCMEGWMGP--ECNR-AICRQ-GCSPKH----- 76 (169)
T ss_dssp -------CCTTEET--TTTCE--ECCCEEETTEEEEECS---SCCE-EECTTEEST--TSCE-ECCCT-TCCTTT-----
T ss_pred cCeee-eCCCcCcC--CCccc--ccCCCCCcCCCCEeCC---CCee-ECCCCCcCC--CCCC-CCCCC-CCCCCC-----
Confidence 45789 99999999 56873 46653 5888889964 4589 999999998 8875 34653 454 33
Q ss_pred cceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccc
Q psy620 203 TRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAV 282 (1290)
Q Consensus 203 ~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~ 282 (1290)
+.|+. .|+| .|++||+| ..|+ +|.....|.+ ++|+ ++|+|. |++||+|..|+
T Consensus 77 ---g~C~~-----~~~C-~C~~G~~G--~~C~---~C~~~~~C~~-g~C~---~~~~C~-C~~G~~G~~C~--------- 128 (169)
T 2vj2_A 77 ---GSCKL-----PGDC-RCQYGWQG--LYCD---KCIPHPGCVH-GICN---EPWQCL-CETNWGGQLCD--------- 128 (169)
T ss_dssp ---EECSS-----TTCC-EECTTEES--SSSC---EECCCTTCSS-EECS---STTCCE-ECTTEETTTTC---------
T ss_pred ---cccCC-----CCee-ECCCCCCC--CCcc---cCCCCCCCCC-CCcC---CCCEEe-CCCCCCCCccc---------
Confidence 56864 4699 99999998 7885 4762334875 4897 578999 99999998854
Q ss_pred cCCCCcccCCCCCCCCCCCCCCCCccccC-CCCcEEcCcCcCCcccc
Q psy620 283 RFRQTCVDIDECADGRNGGCDSNSMCTNT-EGSFTCTSLCRNSYMVR 328 (1290)
Q Consensus 283 ~~~~~C~dideC~~~~~g~C~~~g~C~n~-~gsy~C~~~C~~Gy~g~ 328 (1290)
+++++|.. ..+|.++++|+++ .++|+| +|++||+|.
T Consensus 129 ------~~~~~C~~--~~~C~~~g~C~~~~~~~~~C--~C~~G~~G~ 165 (169)
T 2vj2_A 129 ------KDLNYCGT--HQPCLNGGTCSNTGPDKYQC--SCPEGYSGP 165 (169)
T ss_dssp ------EESCHHHH--TCCCCTTCEEEECSTTCEEE--ECCTTCCST
T ss_pred ------CCCCCCCC--CCCCCCCCEEcCCCCCCcEe--ECCCCCcCc
Confidence 37888975 1249999999996 889999 999999854
No 24
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.40 E-value=2.5e-13 Score=169.75 Aligned_cols=159 Identities=26% Similarity=0.588 Sum_probs=127.9
Q ss_pred CCCCCCCCCCCCeeecCCCCcc---cccCCCCcccCCCCCC-CC--------CCCCCC----CCCCCCeeccCCCCcccc
Q psy620 107 TCATDNPCFPGVECRDTREGPR---CMRCPDGYVGDGIHCK-PG--------VTCNMR----PCFQGVQCFDTVEGYTCG 170 (1290)
Q Consensus 107 ~C~~~~pC~~gg~C~~~~g~y~---C~~C~~Gy~Gdg~~Ce-di--------deC~~~----pC~~gg~C~n~~g~y~C~ 170 (1290)
+|. .+||.++++|.+..+.|. | .|++||+| ..|+ .+ ++|... +|.++|+|++ ++|
T Consensus 436 ~C~-~~pc~n~~~C~~g~G~~~~G~C-~C~~Gy~G--~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C- 506 (690)
T 3fcs_B 436 ACQ-AQAEPNSHRCNNGNGTFECGVC-RCGPGWLG--SQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQC- 506 (690)
T ss_dssp GGG-TTCCTTCTTTTTTSEEEETTEE-EECTTCCS--SSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSE-
T ss_pred CCc-CCCCCCCCcccCCCCeEeCCce-EeCCCccC--CceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----Cee-
Confidence 566 889999999998788887 9 99999999 7887 33 678863 5999999984 689
Q ss_pred cCC----CCCCCCCCCcee-cccCCC---CCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccc---cCCcc
Q psy620 171 PCP----SGYTGDGERCQR-IGGCSR---NPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCH---DIDEC 239 (1290)
Q Consensus 171 ~C~----~Gy~Gdg~~C~~-ideC~~---~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~---dideC 239 (1290)
.|+ +||+|. .|+. +.+|.. .+|.++ ++|.. ++| .|++||+| ..|+ ++++|
T Consensus 507 ~C~~~~~~Gy~G~--~Ce~~~~~C~~~~~~~C~~~--------G~C~~------g~C-~C~~Gy~G--~~CeC~~~~~~C 567 (690)
T 3fcs_B 507 VCHSSDFGKITGK--YCECDDFSCVRYKGEMCSGH--------GQCSC------GDC-LCDSDWTG--YYCNCTTRTDTC 567 (690)
T ss_dssp EECCCSSCCCBST--TSCBCSSCCCBSSSSBGGGS--------EEEET------TEE-EECTTEES--SSSCEECCCTTT
T ss_pred EeecCCCCCeeCC--CcCcccCcCcCCCCCCCCCC--------CEecC------Cee-ECcCCCcC--CCCccCCCCCcc
Confidence 999 999998 8974 678875 479888 89975 589 99999999 7776 57889
Q ss_pred CCC--CCCCCCcccccCCCCeecccC-CCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcE
Q psy620 240 DLA--EPCDPRVQCTNLFPGYRCDPC-PAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFT 316 (1290)
Q Consensus 240 ~~~--~pC~~~g~C~n~~gsy~C~~C-~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~ 316 (1290)
... .+|.++++|++. +|. | ++||+|..|+. | ..|. . +|.++++|+
T Consensus 568 ~~~~g~~C~~~G~C~~g----~C~-C~~~Gy~G~~Ce~-------------C---~~C~-~---~C~~~g~Cv------- 615 (690)
T 3fcs_B 568 MSSNGLLCSGRGKCECG----SCV-CIQPGSYGDTCEK-------------C---PTCP-D---ACTFKKECV------- 615 (690)
T ss_dssp BCTTSSBTSSSCEEETT----EEE-CCSTTCBSTTSCB-------------C---TTSC-C---TTTSCCGGG-------
T ss_pred cCCCCCCCCCCCEEeCC----EEE-CCCCCccCCCcCc-------------C---CCCC-C---CCCCCCCcc-------
Confidence 731 689999999762 899 9 99999999762 2 2352 2 388888886
Q ss_pred EcCcCcCCcccc
Q psy620 317 CTSLCRNSYMVR 328 (1290)
Q Consensus 317 C~~~C~~Gy~g~ 328 (1290)
.|+.||+|.
T Consensus 616 ---~C~~g~tG~ 624 (690)
T 3fcs_B 616 ---ECKKFDRGA 624 (690)
T ss_dssp ---TTTTTCCSS
T ss_pred ---cCCCCCccC
Confidence 589999854
No 25
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.33 E-value=2.3e-13 Score=134.23 Aligned_cols=108 Identities=25% Similarity=0.648 Sum_probs=86.4
Q ss_pred ccCCccCCCCCCCCCcccccC-CCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCC
Q psy620 234 HDIDECDLAEPCDPRVQCTNL-FPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTE 312 (1290)
Q Consensus 234 ~dideC~~~~pC~~~g~C~n~-~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~ 312 (1290)
++|+||. .+||.+ +|+++ .++|+|. |++||+|..++ ...|.+ +|... +|. ++|++ .
T Consensus 2 ~dideC~-~~pC~~--~C~~~~~g~y~C~-C~~Gy~g~~~~-----------~~~C~~--~C~~~---~C~--~~C~~-~ 58 (118)
T 1dx5_I 2 EPVDPCF-RANCEY--QCQPLDQTSYLCV-CAEGFAPIPHE-----------PHRCQM--FCNQT---ACP--ADCDP-N 58 (118)
T ss_dssp CCCCGGG-GCCCSS--EEEECSSSCEEEE-CCTTEEEETTE-----------EEEEEE--CCCSS---EEE--CEECT-T
T ss_pred CccccCC-CCCCCC--CCCCCCCCCEEeE-CCCCccccCCC-----------CCcccc--ccCCC---CCC--CcccC-C
Confidence 3689997 889983 99999 9999999 99999998621 112322 34433 365 78988 5
Q ss_pred CCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCccc
Q psy620 313 GSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAG 374 (1290)
Q Consensus 313 gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~G 374 (1290)
++|+| .|++||++.. +..|++ +++|...++| +++|+++ .++|+|.|++||+|
T Consensus 59 ~~y~C--~C~~Gy~~~~-g~~C~d----ideC~~~~~C--~~~C~n~-~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 59 TQASC--ECPEGYILDD-GFICTD----IDECENGGFC--SGVCHNL-PGTFECICGPDSAL 110 (118)
T ss_dssp STTCE--ECCTTEEEET-TTEEEE----CCHHHHCSSC--SSEEEEC-SSSEEEEECSSSSC
T ss_pred CCeEe--ECCCCccCCC-CCcccc----ccccCCCCCC--cCeEEeC-CCCEEEECCCCCcc
Confidence 89999 9999998765 778987 8999855889 6899998 89999999999997
No 26
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.30 E-value=1.1e-13 Score=141.69 Aligned_cols=134 Identities=27% Similarity=0.578 Sum_probs=93.7
Q ss_pred CCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCC
Q psy620 145 PGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPE 224 (1290)
Q Consensus 145 dideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~ 224 (1290)
+++||+.+||.+ ++|+++.++|+| .|++||+|+ .+. .+|+... .. .|..
T Consensus 3 dideC~~~pC~n-g~C~n~~g~y~C-~C~~G~~g~--~~~---------------------~~C~~~~-----~~-~C~~ 51 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNSPGSFIC-ECSSESTLD--PTK---------------------TICIETI-----KG-TCWQ 51 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEETTEEEE-ECCTTEEEC--TTS---------------------SBEEECC-----CE-EEEE
T ss_pred cCccCcCCCCCC-CEeECCCCCEEe-ECCCCcccC--CCC---------------------CeecCCC-----CC-cccC
Confidence 689999999986 699999999999 999999986 221 2343321 12 3445
Q ss_pred CCcCCCCccc-cCCccCCCCCCCCCcccccCCC----------CeecccCCCCCccCCCCccccccccccCCCCcccCCC
Q psy620 225 GTTGNGTRCH-DIDECDLAEPCDPRVQCTNLFP----------GYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDE 293 (1290)
Q Consensus 225 Gy~Gdg~~C~-dideC~~~~pC~~~g~C~n~~g----------sy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dide 293 (1290)
+|.+ ..|+ .+++|.. .+.|.+..+ .|+|. |++||++.. +..|++|+|
T Consensus 52 ~~~g--~~C~~~~~~c~~------~~~C~~~~g~~~g~~C~~c~~~C~-C~~Gy~~~~-------------g~~C~dide 109 (147)
T 2w86_A 52 TVID--GRCEININGATL------KSQCCSSLGAAWGSPCTLCQVDPI-CGKGYSRIK-------------GTQCEDIDE 109 (147)
T ss_dssp EEET--TEEEEEEEEEEC------HHHHHTTTCSEETTTTEECCCCTT-TCTTEEEEE-------------TTEEEECCH
T ss_pred CCCC--CccccCCCcccc------CCccccCcCcccCCCcccCCCccc-CCCccccCC-------------CCccCcccc
Confidence 5555 4564 3444431 122322222 27898 999997421 245889999
Q ss_pred CCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCC
Q psy620 294 CADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335 (1290)
Q Consensus 294 C~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~ 335 (1290)
|+.. .+.|.+ ++|+++.++|+| .|++||++...++.|+
T Consensus 110 C~~~-~~~C~~-g~C~n~~g~y~C--~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 110 CEVF-PGVCKN-GLCVNTRGSFKC--QCPSGMTLDATGRICL 147 (147)
T ss_dssp HHHS-TTCSSS-SEEEEETTEEEE--ECCTTCCBCTTSSCBC
T ss_pred ccCC-CCCCCC-CEEECCCCCEEe--eCCCCCccCCCCCeeC
Confidence 9876 466985 699999999999 9999999887777763
No 27
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.28 E-value=3.2e-13 Score=133.22 Aligned_cols=105 Identities=32% Similarity=0.666 Sum_probs=85.3
Q ss_pred CCCCCCCCCCCCCCeeccC-CCCcccccCCCCCCCCCC---CceecccCCCCCCCCCCCCCCcceeeeccCCCCCceecC
Q psy620 145 PGVTCNMRPCFQGVQCFDT-VEGYTCGPCPSGYTGDGE---RCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCG 220 (1290)
Q Consensus 145 dideC~~~pC~~gg~C~n~-~g~y~C~~C~~Gy~Gdg~---~C~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~ 220 (1290)
++++|+.+||.+ +|+++ .++|+| .|++||+|... .|+ ++|...+|. ++|++. ++|+|
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C-~C~~Gy~g~~~~~~~C~--~~C~~~~C~----------~~C~~~---~~y~C- 63 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLC-VCAEGFAPIPHEPHRCQ--MFCNQTACP----------ADCDPN---TQASC- 63 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEE-ECCTTEEEETTEEEEEE--ECCCSSEEE----------CEECTT---STTCE-
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEe-ECCCCccccCCCCCccc--cccCCCCCC----------CcccCC---CCeEe-
Confidence 689999999984 99999 899999 99999998721 232 234555554 358763 58999
Q ss_pred CCCCCCcCC-CCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCC
Q psy620 221 SCPEGTTGN-GTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGST 271 (1290)
Q Consensus 221 ~C~~Gy~Gd-g~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~ 271 (1290)
.|++||+++ +..|++++||...++| +++|+++.++|+|. |++||+|..
T Consensus 64 ~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g~y~C~-C~~G~~g~~ 112 (118)
T 1dx5_I 64 ECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPGTFECI-CGPDSALAG 112 (118)
T ss_dssp ECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSSSEEEE-ECSSSSCEE
T ss_pred ECCCCccCCCCCccccccccCCCCCC--cCeEEeCCCCEEEE-CCCCCccCC
Confidence 999999944 4899999999844899 68999999999999 999999865
No 28
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.20 E-value=8.5e-13 Score=135.02 Aligned_cols=120 Identities=26% Similarity=0.613 Sum_probs=84.3
Q ss_pred cCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCC-----------CCCCCCCCCCC
Q psy620 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDID-----------ECADGRNGGCD 303 (1290)
Q Consensus 235 dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~did-----------eC~~~~~g~C~ 303 (1290)
+|+||. .+||.+ ++|+++.++|+|. |++||+|..+. ..|+++. .|... ...|.
T Consensus 3 dideC~-~~pC~n-g~C~n~~g~y~C~-C~~G~~g~~~~------------~~C~~~~~~~C~~~~~g~~C~~~-~~~c~ 66 (147)
T 2w86_A 3 DIDECE-SSPCIN-GVCKNSPGSFICE-CSSESTLDPTK------------TICIETIKGTCWQTVIDGRCEIN-INGAT 66 (147)
T ss_dssp CCCGGG-GCCSBT-SEEEEETTEEEEE-CCTTEEECTTS------------SBEEECCCEEEEEEEETTEEEEE-EEEEE
T ss_pred cCccCc-CCCCCC-CEeECCCCCEEeE-CCCCcccCCCC------------CeecCCCCCcccCCCCCCccccC-CCccc
Confidence 689998 789986 6999999999999 99999998632 2232221 12111 01122
Q ss_pred CCCccccCCCC----------cEEcCcCcCCccccCCCCCCCCCCCCCCCCCCC-CCCCCCCeEeeecCCceEEecCCCc
Q psy620 304 SNSMCTNTEGS----------FTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDG-TRCDRNAKCTRILGNHYACKCDNGW 372 (1290)
Q Consensus 304 ~~g~C~n~~gs----------y~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~-~~C~~~g~C~~~~~gsy~C~C~~Gy 372 (1290)
.++.|.+..++ |+| .|++||++. .++.|++ |++|... ++|.+ ++|+++ .++|+|.|++||
T Consensus 67 ~~~~C~~~~g~~~g~~C~~c~~~C--~C~~Gy~~~-~g~~C~d----ideC~~~~~~C~~-g~C~n~-~g~y~C~C~~Gy 137 (147)
T 2w86_A 67 LKSQCCSSLGAAWGSPCTLCQVDP--ICGKGYSRI-KGTQCED----IDECEVFPGVCKN-GLCVNT-RGSFKCQCPSGM 137 (147)
T ss_dssp CHHHHHTTTCSEETTTTEECCCCT--TTCTTEEEE-ETTEEEE----CCHHHHSTTCSSS-SEEEEE-TTEEEEECCTTC
T ss_pred cCCccccCcCcccCCCcccCCCcc--cCCCccccC-CCCccCc----cccccCCCCCCCC-CEEECC-CCCEEeeCCCCC
Confidence 22334444333 788 999999752 3678987 8999742 66985 699999 899999999999
Q ss_pred ccC--CCCc
Q psy620 373 AGD--GQFC 379 (1290)
Q Consensus 373 ~Gd--G~~C 379 (1290)
+|+ +++|
T Consensus 138 ~g~~~~~~C 146 (147)
T 2w86_A 138 TLDATGRIC 146 (147)
T ss_dssp CBCTTSSCB
T ss_pred ccCCCCCee
Confidence 984 4555
No 29
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.14 E-value=2e-11 Score=112.44 Aligned_cols=75 Identities=28% Similarity=0.695 Sum_probs=66.9
Q ss_pred cccCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCC-CCCCCCCCeeccCCCCcccccCCCCCCCCC
Q psy620 102 IVKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCN-MRPCFQGVQCFDTVEGYTCGPCPSGYTGDG 180 (1290)
Q Consensus 102 ~~~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~-~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg 180 (1290)
+.++++|+..+||.+ ++|+++.++|+| .|++||++++..|+++++|. .+||.+ ++|+++.++|+| .|++||+|++
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C-~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C-~C~~G~~g~~ 77 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRC-ECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFEC-TCEEGFEPGP 77 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCE-ECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEE-CCSSSSCCCS
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEE-ECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEe-ECCCCeEeCC
Confidence 457899985589986 899999999999 99999996668999999998 789986 599999999999 9999999874
No 30
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.10 E-value=3.4e-11 Score=113.24 Aligned_cols=81 Identities=23% Similarity=0.547 Sum_probs=70.0
Q ss_pred CcccccCCCCCCCCCCCceecccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccc--cCCccCCCC
Q psy620 166 GYTCGPCPSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCH--DIDECDLAE 243 (1290)
Q Consensus 166 ~y~C~~C~~Gy~Gdg~~C~~ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~--dideC~~~~ 243 (1290)
+|+| .|++||+|. .|+ +++|...||.++ .++|+| .|++||+ .|+ ++++|. ++
T Consensus 1 sy~C-~C~~g~~g~--~c~-~~~c~~~pC~n~----------------~~~y~C-~C~~G~~----~C~~~~~~~C~-~~ 54 (91)
T 1tpg_A 1 SYQV-ICRDEKTQM--IYQ-QHQSWLRPVLRS----------------NRVEYC-WCNSGRA----QCHSVPVKSCS-EP 54 (91)
T ss_dssp CCCC-CCBCSSSCC--BCC-SSCEEEEECSSS----------------SCEEEE-ECSSSCC----BCCEECEEECS-SC
T ss_pred Ceee-ECCCCCcCC--eEC-CCcccCCccccC----------------CCCcEe-ECCCCCc----ccccCcCCccc-CC
Confidence 5899 999999997 774 778877777665 258999 9999997 786 789998 78
Q ss_pred CCCCCcccccCC--CCeecccCCCCCccCCCC
Q psy620 244 PCDPRVQCTNLF--PGYRCDPCPAGFTGSTGV 273 (1290)
Q Consensus 244 pC~~~g~C~n~~--gsy~C~~C~~Gy~G~~Ce 273 (1290)
||.++++|++.. ++|+|. |++||+|..|+
T Consensus 55 pC~ngg~C~~~~~~~~~~C~-C~~G~~G~~Ce 85 (91)
T 1tpg_A 55 RCFNGGTCQQALYFSDFVCQ-CPEGFAGKSCE 85 (91)
T ss_dssp CSCTTCEEEEESSSSCEEEE-CCTTCBSSSCC
T ss_pred CCCCCCEeecCCCCCCeEeE-CCCCCcCCcCC
Confidence 999999999987 899999 99999999976
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.07 E-value=8.8e-11 Score=110.38 Aligned_cols=87 Identities=22% Similarity=0.489 Sum_probs=70.5
Q ss_pred CeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCC-
Q psy620 257 GYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ- 335 (1290)
Q Consensus 257 sy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~- 335 (1290)
+|+|. |.+||+|.. | ++++|...| |++..++|+| .|++||+ .|+
T Consensus 1 sy~C~-C~~g~~g~~----------------c-~~~~c~~~p---------C~n~~~~y~C--~C~~G~~------~C~~ 45 (91)
T 1tpg_A 1 SYQVI-CRDEKTQMI----------------Y-QQHQSWLRP---------VLRSNRVEYC--WCNSGRA------QCHS 45 (91)
T ss_dssp CCCCC-CBCSSSCCB----------------C-CSSCEEEEE---------CSSSSCEEEE--ECSSSCC------BCCE
T ss_pred CeeeE-CCCCCcCCe----------------E-CCCcccCCc---------cccCCCCcEe--ECCCCCc------cccc
Confidence 58999 999999876 3 467887654 4566789999 9999995 586
Q ss_pred CCCCCCCCCCCCCCCCCCCeEeeec-CCceEEecCCCcccCCCCcCCcCC
Q psy620 336 SQNFGADVCPDGTRCDRNAKCTRIL-GNHYACKCDNGWAGDGQFCGRDTD 384 (1290)
Q Consensus 336 ~~~~~id~C~~~~~C~~~g~C~~~~-~gsy~C~C~~Gy~GdG~~Ce~~~d 384 (1290)
.. +++|. .++|.++|+|++.. .++|+|.|++||+| .+|+.+++
T Consensus 46 ~~---~~~C~-~~pC~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce~~id 89 (91)
T 1tpg_A 46 VP---VKSCS-EPRCFNGGTCQQALYFSDFVCQCPEGFAG--KSCEIDTR 89 (91)
T ss_dssp EC---EEECS-SCCSCTTCEEEEESSSSCEEEECCTTCBS--SSCCBCSS
T ss_pred Cc---CCccc-CCCCCCCCEeecCCCCCCeEeECCCCCcC--CcCCcCCC
Confidence 22 68898 58999999999872 28899999999999 99986655
No 32
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.06 E-value=1e-10 Score=107.72 Aligned_cols=81 Identities=36% Similarity=0.867 Sum_probs=66.3
Q ss_pred ccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccC
Q psy620 232 RCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNT 311 (1290)
Q Consensus 232 ~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~ 311 (1290)
.|++++||....+|.+ ++|+++.++|+|. |++||++.. ..|++++||... .+|.+ ++|+++
T Consensus 1 sC~dideC~~~~~C~~-g~C~n~~g~y~C~-C~~Gy~~~g--------------~~C~dideC~~~--~~C~~-~~C~n~ 61 (82)
T 1emn_A 1 SAVDMDECKEPDVCKH-GQCINTDGSYRCE-CPFGYILAG--------------NECVDTDECSVG--NPCGN-GTCKNV 61 (82)
T ss_dssp CCCCCCSSSSTTSCSS-SEECCCSSCCCEE-CCTTEEEET--------------TEEEECCGGGTC--CTTSS-SCEEEC
T ss_pred CCCccccCCCCCCcCC-CEEEecCCCEEEE-CCCCeECCC--------------CccCCcccccCC--CCCCC-CEeECC
Confidence 4788999984589985 8999999999999 999998532 458899999842 34985 699999
Q ss_pred CCCcEEcCcCcCCccccCCCCCC
Q psy620 312 EGSFTCTSLCRNSYMVRNVSVGC 334 (1290)
Q Consensus 312 ~gsy~C~~~C~~Gy~g~~~g~~C 334 (1290)
.++|+| .|++||++... +.|
T Consensus 62 ~g~y~C--~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 62 IGGFEC--TCEEGFEPGPM-MTC 81 (82)
T ss_dssp SSSEEE--CCSSSSCCCSS-SCC
T ss_pred CCCEEe--ECCCCeEeCCC-Ccc
Confidence 999999 99999987654 444
No 33
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.05 E-value=7.6e-11 Score=147.03 Aligned_cols=143 Identities=24% Similarity=0.592 Sum_probs=110.3
Q ss_pred CCCCCCCCeeecCCCCcccccCCCCcccCCCCCC-CCC---------CCCCC----CCCCCCeeccCCCCcccccCC---
Q psy620 111 DNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK-PGV---------TCNMR----PCFQGVQCFDTVEGYTCGPCP--- 173 (1290)
Q Consensus 111 ~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce-did---------eC~~~----pC~~gg~C~n~~g~y~C~~C~--- 173 (1290)
+.+|.++|+|.. ..| .|++||+| ..|+ .++ .|... +|.++|+|+.. +| .|+
T Consensus 434 s~~Cs~~G~C~~----g~C-~C~~Gy~G--~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C-~C~~~~ 501 (687)
T 3k6s_B 434 RSLCHGKGFLEC----GIC-RCDTGYIG--KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QC-LCHTSD 501 (687)
T ss_dssp SSTGGGSEEESS----SSE-EECSSEES--TTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EE-EECCCC
T ss_pred CCCCCCCCEEeC----CEe-EcCCCCcC--CcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EE-EcCCCC
Confidence 678988889973 489 99999999 7888 332 58754 49999999942 89 999
Q ss_pred ---CCCCCCCCCcee-cccCCC---CCCCC--CCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccc---cCCccCC
Q psy620 174 ---SGYTGDGERCQR-IGGCSR---NPCAQ--GKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCH---DIDECDL 241 (1290)
Q Consensus 174 ---~Gy~Gdg~~C~~-ideC~~---~pC~~--g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~---dideC~~ 241 (1290)
+||+|. .|+. ...|.. .+|.+ + ++|.. .+| .|.+||+| ..|+ .++.|..
T Consensus 502 ~~~~G~~G~--~Ce~~~~~C~~~~~~~C~~~~~--------G~C~~------g~C-~C~~G~~G--~~Cec~~~~~~C~~ 562 (687)
T 3k6s_B 502 VPGKLIYGQ--YCECDTINCERYNGQVCGGPGR--------GLCFC------GKC-RCHPGFEG--SACQCERTTEGCLN 562 (687)
T ss_dssp STTCCEEST--TSCEESSCSCEETTEETSHHHH--------EEEET------TEE-EECTTCCS--TTSCSCCSSCTTBC
T ss_pred CCCCCcccc--ccccccccccCCCCcCcCCCCC--------CeEEC------CEE-EcCCCCcC--CCCccCCCCCCCCC
Confidence 999998 8874 667874 36877 7 78974 189 99999999 7886 3577862
Q ss_pred --CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccc
Q psy620 242 --AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCT 309 (1290)
Q Consensus 242 --~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~ 309 (1290)
..+|.++++|.. .+|. |++||+|..|+. | ..|.. +|.+++.|+
T Consensus 563 ~~g~~Cs~~G~C~~----g~C~-C~~Gy~G~~Ce~-------------c---~~C~~----~C~~~g~Cv 607 (687)
T 3k6s_B 563 PRRVECSGRGRCRC----NVCE-CHSGYQLPLCQE-------------C---PGCPS----PCGKYISCA 607 (687)
T ss_dssp TTCSBTSSSCCBCS----SCBC-CSTTCCTTTTCC-------------C---TTSCC----CCTTTHHHH
T ss_pred CCCCCCCCCCcCCC----CEEE-CCCCCcCCCCCC-------------C---CCCCc----ccCCCCCCC
Confidence 137999999987 4799 999999999762 2 24532 388888886
No 34
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.02 E-value=1.2e-10 Score=145.11 Aligned_cols=150 Identities=25% Similarity=0.609 Sum_probs=110.9
Q ss_pred CCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee-cc---------cCCCC----CCCCCCCCCCcceeeeccCCCCC
Q psy620 150 NMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR-IG---------GCSRN----PCAQGKLNEKTRCVRCDDIPEHP 215 (1290)
Q Consensus 150 ~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-id---------eC~~~----pC~~g~~~~~~~Cg~C~~~~~~g 215 (1290)
.+.+|.++|+|.. ..| .|++||+|. .|+. ++ .|... +|.++ ++|.. +
T Consensus 433 ~s~~Cs~~G~C~~----g~C-~C~~Gy~G~--~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~--------G~C~~----G 493 (687)
T 3k6s_B 433 DRSLCHGKGFLEC----GIC-RCDTGYIGK--NCECQTQGRSSQELEGSCRKDNNSIICSGL--------GDCVC----G 493 (687)
T ss_dssp CSSTGGGSEEESS----SSE-EECSSEEST--TSCEESSSCCCSGGGSTTSSSTTSCGGGSS--------EEEET----T
T ss_pred CCCCCCCCCEEeC----CEe-EcCCCCcCC--cccccCCcCCccccCCCCCCCCCCCcCCCC--------CEEeC----C
Confidence 4567988899983 479 999999998 8873 22 47653 48887 89983 1
Q ss_pred ceecCCCC------CCCcCCCCccc-cCCccCC--CCCCCC--CcccccCCCCeecccCCCCCccCCCCccccccccccC
Q psy620 216 YYRCGSCP------EGTTGNGTRCH-DIDECDL--AEPCDP--RVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRF 284 (1290)
Q Consensus 216 ~y~C~~C~------~Gy~Gdg~~C~-dideC~~--~~pC~~--~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~ 284 (1290)
+| .|+ +||+| ..|+ +...|.. ..+|.+ +++|.. + +|. |++||+|..|+..
T Consensus 494 --~C-~C~~~~~~~~G~~G--~~Ce~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~-C~~G~~G~~Cec~--------- 554 (687)
T 3k6s_B 494 --QC-LCHTSDVPGKLIYG--QYCECDTINCERYNGQVCGGPGRGLCFC--G--KCR-CHPGFEGSACQCE--------- 554 (687)
T ss_dssp --EE-EECCCCSTTCCEES--TTSCEESSCSCEETTEETSHHHHEEEET--T--EEE-ECTTCCSTTSCSC---------
T ss_pred --EE-EcCCCCCCCCCccc--cccccccccccCCCCcCcCCCCCCeEEC--C--EEE-cCCCCcCCCCccC---------
Confidence 89 999 99999 8896 5678862 246988 899985 2 799 9999999997610
Q ss_pred CCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEe
Q psy620 285 RQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCT 357 (1290)
Q Consensus 285 ~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~ 357 (1290)
..++.|.......|.++|+|+. ++| .|++||+| ..|+. ...|. .+|.++++|+
T Consensus 555 ----~~~~~C~~~~g~~Cs~~G~C~~----g~C--~C~~Gy~G----~~Ce~----c~~C~--~~C~~~g~Cv 607 (687)
T 3k6s_B 555 ----RTTEGCLNPRRVECSGRGRCRC----NVC--ECHSGYQL----PLCQE----CPGCP--SPCGKYISCA 607 (687)
T ss_dssp ----CSSCTTBCTTCSBTSSSCCBCS----SCB--CCSTTCCT----TTTCC----CTTSC--CCCTTTHHHH
T ss_pred ----CCCCCCCCCCCCCCCCCCcCCC----CEE--ECCCCCcC----CCCCC----CCCCC--cccCCCCCCC
Confidence 2356676531235998999987 469 99999985 45654 23475 6898888886
No 35
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.00 E-value=1.9e-10 Score=117.58 Aligned_cols=81 Identities=31% Similarity=0.736 Sum_probs=67.1
Q ss_pred CcccCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCCCC--CCCCCCee-ccCCCCcccccCCCCCC
Q psy620 101 PIVKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMR--PCFQGVQC-FDTVEGYTCGPCPSGYT 177 (1290)
Q Consensus 101 ~~~~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~~--pC~~gg~C-~n~~g~y~C~~C~~Gy~ 177 (1290)
.++++++|. ++||.++++|++..++|+| .|++||+| ..|+++++|... +|.+ +| +++.++|+| .|++||+
T Consensus 44 ~c~dideC~-~~pC~n~g~C~~~~~~y~C-~C~~G~~G--~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C-~C~~Gy~ 116 (146)
T 1x7a_L 44 QYVDGDQCE-PNPCLNGGLCKDDINSYEC-WCQVGFEG--KNCELDATCNIKNGRCKQ--FCKTGADSKVLC-SCTTGYR 116 (146)
T ss_dssp ------CCS-SCSSCTTCEEEECSSCEEE-ECCSSEES--TTTCEECCTTSGGGSCSS--BCCCCSSSCCCC-BCCTTEE
T ss_pred cCCCcCcCC-CCCCCCCCEeECCCCCEEE-ecCCCCcC--CcCCCCccccCCCCCCcC--CCCCCCCCCEEe-EcCCCcE
Confidence 356889999 9999999999999999999 99999998 899988999975 5654 99 999999999 9999999
Q ss_pred --CCCCCceeccc
Q psy620 178 --GDGERCQRIGG 188 (1290)
Q Consensus 178 --Gdg~~C~~ide 188 (1290)
+++++|+.+++
T Consensus 117 l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 117 LAPDQKSCKPAVP 129 (146)
T ss_dssp ECTTSSSEEECSS
T ss_pred eCCCCCcCCCCCC
Confidence 45569998654
No 36
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.99 E-value=4.5e-10 Score=133.93 Aligned_cols=153 Identities=27% Similarity=0.651 Sum_probs=95.8
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceec-----------ccCC-CCCC
Q psy620 127 PRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRI-----------GGCS-RNPC 194 (1290)
Q Consensus 127 y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~i-----------deC~-~~pC 194 (1290)
+.| .|++||+| ..|+. .| .||.++++|.+ +.++| .|++||+|. .|+.. ++|. ..+|
T Consensus 185 ~~c-~C~~g~~G--~~C~~--~C--~~C~~~G~C~~--~~g~C-~C~~G~~G~--~Ce~~C~~g~~g~~C~~~C~~~~~C 252 (423)
T 2gy5_A 185 IVR-RCEAQKWG--PECNH--LC--TACMNNGVCHE--DTGEC-ICPPGFMGR--TCEKACELHTFGRTCKERCSGQEGC 252 (423)
T ss_dssp EEC-SSCTTEES--TTSCE--EC--CCCCTTCEECT--TTCCE-ECCTTEEST--TSCEECCTTEESTTSCEECCSTTTT
T ss_pred cCC-cCCCCCCC--CCCCC--CC--CCCCCCCEEEC--CCCcE-eCCCCccCC--CcccccCCCCCCCCcCccCCCCCCC
Confidence 468 99999999 67774 35 38999999987 56799 999999998 77641 1222 1334
Q ss_pred CCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCc
Q psy620 195 AQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQ 274 (1290)
Q Consensus 195 ~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~ 274 (1290)
.++ +.|.. +.|+| .|++||+| ..|+. . |++||.|..|+
T Consensus 253 ~~~--------g~C~~----~~~~C-~C~~G~~G--~~C~~-------------------------~-C~~G~~G~~C~- 290 (423)
T 2gy5_A 253 KSY--------VFCLP----DPYGC-SCATGWKG--LQCNE-------------------------A-CHPGFYGPDCK- 290 (423)
T ss_dssp TTC--------CEEET----TTTEE-ECCBTCBS--GGGCB-------------------------C-CCTTBCSBTTC-
T ss_pred CCC--------CEECC----CCCeE-EeCCCccc--ccccC-------------------------c-cCCCCcCCccc-
Confidence 444 44531 24566 66666666 44431 2 55666665532
Q ss_pred cccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy620 275 GVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNA 354 (1290)
Q Consensus 275 ~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g 354 (1290)
. +| + |.++++|.+.. .| .|++||+| ..|+.. ..... . .
T Consensus 291 ---------------~--~C---~---C~ngg~C~~~~---~C--~C~~G~~G----~~Ce~~---~~~~~--~-----~ 328 (423)
T 2gy5_A 291 ---------------L--RC---S---CNNGEMCDRFQ---GC--LCSPGWQG----LQCERE---GIPRM--T-----P 328 (423)
T ss_dssp ---------------C--BC---C---CTTCCEEETTT---EE--ECCTTCBS----TTSCBC---SSCCC--C-----C
T ss_pred ---------------c--cc---c---CCCCCEecCCC---ce--ECCCCCcC----CCCccC---ccCCc--C-----c
Confidence 1 23 2 88889998764 39 99999985 456541 01111 1 1
Q ss_pred eEeeecCCceEEecCCCcccCCCCcC
Q psy620 355 KCTRILGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 355 ~C~~~~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
.... ..-.|.|+.||.| ..|+
T Consensus 329 ~~~~---~~~~~~c~~g~~g--~~C~ 349 (423)
T 2gy5_A 329 KIVD---LPDHIEVNSGKFN--PICK 349 (423)
T ss_dssp EECS---CCSBCCEESEEEC--CEEE
T ss_pred ceec---CCCeEEeCCCccC--Cccc
Confidence 1111 1235899999999 6775
No 37
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.97 E-value=1.8e-10 Score=107.06 Aligned_cols=83 Identities=34% Similarity=0.773 Sum_probs=67.7
Q ss_pred cCCccCC-CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCC
Q psy620 235 DIDECDL-AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEG 313 (1290)
Q Consensus 235 dideC~~-~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~g 313 (1290)
+|+||.. +.+|.+ ++|+++.++|+|. |++||++.. ..+..|++|+||... ...|. +++|+++.|
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~-C~~Gy~~~~-----------~~g~~C~dideC~~~-~~~C~-~~~C~n~~g 66 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECK-CDEGYESGF-----------MMMKNCMDIDECQRD-PLLCR-GGVCHNTEG 66 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEEC-CCSSEEECT-----------TTSSSEEECCHHHHC-SSTTT-TSEEEEETT
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEee-CCCCcCccC-----------CCCCccCCcccccCC-CCcCC-CCEeEcCCC
Confidence 6899983 245975 5999999999999 999999653 124668999999877 45576 589999999
Q ss_pred CcEEcCcCcCCccccCCCCCC
Q psy620 314 SFTCTSLCRNSYMVRNVSVGC 334 (1290)
Q Consensus 314 sy~C~~~C~~Gy~g~~~g~~C 334 (1290)
+|+| .|++||++...++.|
T Consensus 67 ~y~C--~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 67 SYRC--ECPPGHQLSPNISAC 85 (86)
T ss_dssp EEEE--ESCTTSCCCSSSCCC
T ss_pred CEEE--ECcCCcccCCCCCcc
Confidence 9999 999999987777666
No 38
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.97 E-value=2e-10 Score=116.85 Aligned_cols=87 Identities=26% Similarity=0.583 Sum_probs=73.5
Q ss_pred cccCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCC-CCCCCCCCCCCCC---eeccCCC-CcccccCCCCC
Q psy620 102 IVKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKP-GVTCNMRPCFQGV---QCFDTVE-GYTCGPCPSGY 176 (1290)
Q Consensus 102 ~~~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ced-ideC~~~pC~~gg---~C~n~~g-~y~C~~C~~Gy 176 (1290)
+.++++|+ ++||+++++|+++.++|+| .|++||+| ..|++ +++|...+|.+++ +|+++.+ +|+| .|++||
T Consensus 44 c~did~C~-~~pC~n~g~C~~~~g~y~C-~C~~G~~G--~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C-~C~~Gy 118 (142)
T 2c4f_L 44 YSDGDQCA-SSPCQNGGSCKDQLQSYIC-FCLPAFEG--RNCETHKDDQLICVNENGGCEQYCSDHTGTKRSC-RCHEGY 118 (142)
T ss_dssp HTTCCGGG-GCCCCTTCEEEEETTEEEE-ECCTTEES--TTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEE-ECCTTE
T ss_pred CCccCcCc-CCCcCCCCEEeCCCCCEEe-eCCCCccC--CccccCccccccccCCCCCccCEeECCCCCCEEE-ECCCCc
Confidence 45789999 8999999999999999999 99999998 89995 6887766776666 9999999 9999 999999
Q ss_pred C--CCCCCceeccc--CCCCC
Q psy620 177 T--GDGERCQRIGG--CSRNP 193 (1290)
Q Consensus 177 ~--Gdg~~C~~ide--C~~~p 193 (1290)
+ +++++|+.+++ |...|
T Consensus 119 ~l~~dG~~C~~~~e~pCg~~p 139 (142)
T 2c4f_L 119 SLLADGVSCTPTVEYPCGKIP 139 (142)
T ss_dssp EECTTSSCEEESSSSCTTCCT
T ss_pred eECCCCCCCCCCCccCCCCCC
Confidence 9 55669998665 44444
No 39
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.92 E-value=1.9e-10 Score=106.79 Aligned_cols=72 Identities=28% Similarity=0.642 Sum_probs=61.8
Q ss_pred cCCCCCC-CCCCCCCCeeecCCCCcccccCCCCcccC---CCCCCCCCCCCCCC--CCCCCeeccCCCCcccccCCCCCC
Q psy620 104 KKPTCAT-DNPCFPGVECRDTREGPRCMRCPDGYVGD---GIHCKPGVTCNMRP--CFQGVQCFDTVEGYTCGPCPSGYT 177 (1290)
Q Consensus 104 ~~d~C~~-~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gd---g~~CedideC~~~p--C~~gg~C~n~~g~y~C~~C~~Gy~ 177 (1290)
++++|+. +++|.+ ++|+++.++|+| .|++||++. +..|++++||+..| |. +++|+++.++|+| .|++||+
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C-~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C-~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFEC-KCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRC-ECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEE-CCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEE-ESCTTSC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEe-eCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEE-ECcCCcc
Confidence 5789983 345976 499999999999 999999943 58999999998877 65 5799999999999 9999999
Q ss_pred CC
Q psy620 178 GD 179 (1290)
Q Consensus 178 Gd 179 (1290)
+.
T Consensus 78 ~~ 79 (86)
T 1lmj_A 78 LS 79 (86)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 40
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.91 E-value=5.1e-10 Score=114.40 Aligned_cols=83 Identities=28% Similarity=0.689 Sum_probs=67.9
Q ss_pred CccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCcc-c
Q psy620 231 TRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMC-T 309 (1290)
Q Consensus 231 ~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C-~ 309 (1290)
..|.++++|. ++||.++++|+++.++|+|. |++||+|.. |.++++|... ++.|.+ +| +
T Consensus 43 ~~c~dideC~-~~pC~n~g~C~~~~~~y~C~-C~~G~~G~~----------------C~~~deC~~~-~~~C~~--~C~~ 101 (146)
T 1x7a_L 43 KQYVDGDQCE-PNPCLNGGLCKDDINSYECW-CQVGFEGKN----------------CELDATCNIK-NGRCKQ--FCKT 101 (146)
T ss_dssp -------CCS-SCSSCTTCEEEECSSCEEEE-CCSSEESTT----------------TCEECCTTSG-GGSCSS--BCCC
T ss_pred ccCCCcCcCC-CCCCCCCCEeECCCCCEEEe-cCCCCcCCc----------------CCCCccccCC-CCCCcC--CCCC
Confidence 4688999998 89999999999999999999 999999877 5667999876 456874 99 9
Q ss_pred cCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 310 NTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 310 n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
++.++|+| .|++||++...++.|+.
T Consensus 102 n~~g~y~C--~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 102 GADSKVLC--SCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CSSSCCCC--BCCTTEEECTTSSSEEE
T ss_pred CCCCCEEe--EcCCCcEeCCCCCcCCC
Confidence 99999999 99999998777888987
No 41
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.89 E-value=2.6e-09 Score=131.17 Aligned_cols=220 Identities=18% Similarity=0.331 Sum_probs=84.1
Q ss_pred eeecCCCCcccccCCCCcccCCCCCC-CCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee-cccCCCCCCCC
Q psy620 119 ECRDTREGPRCMRCPDGYVGDGIHCK-PGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR-IGGCSRNPCAQ 196 (1290)
Q Consensus 119 ~C~~~~g~y~C~~C~~Gy~Gdg~~Ce-dideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-ideC~~~pC~~ 196 (1290)
.+......++| .|++||+| ..|+ .++.|...||.. ++|......+.| .|+.. +. .|.. ...|...++.+
T Consensus 271 ~~~~g~~~g~C-~C~~G~~G--~~Ce~C~~g~~~~p~~~-~~c~~~~~~~~C-~C~~~--~~--~C~~d~~~c~~~~~~~ 341 (525)
T 4aqs_A 271 EEVEGMVHGHC-MCRHNTKG--LNCELCMDFYHDLPWRP-AEGRNSNACKKC-NCNEH--SS--SCHFDMAVFLATGNVS 341 (525)
T ss_dssp --CCSCCCCEE-CCCTTEES--SSSCEECTTCCSSCCCC-CBTTBCCCCCCC-CCTTS--CS--EEEECHHHHHHTTSSC
T ss_pred cCCCCCcCccc-cCcCCCcC--CCCcCCCCccCCCccCC-CcccCCCccccc-ccCCC--CC--CCCCCcccccccCccC
Confidence 44555567899 99999999 8998 566777788754 467776677777 77532 22 5553 33333344444
Q ss_pred CCCCCCcceeeeccC-CCCCceecCCCCCCCcCCC-----------------------CccccCCccCCCCCCCCCcccc
Q psy620 197 GKLNEKTRCVRCDDI-PEHPYYRCGSCPEGTTGNG-----------------------TRCHDIDECDLAEPCDPRVQCT 252 (1290)
Q Consensus 197 g~~~~~~~Cg~C~~~-~~~g~y~C~~C~~Gy~Gdg-----------------------~~C~dideC~~~~pC~~~g~C~ 252 (1290)
+ +.|..- .+..+..|..|.+||.+.. ..|.....+. ...+.....|.
T Consensus 342 g--------g~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~-~~~~~~~C~C~ 412 (525)
T 4aqs_A 342 G--------GVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFS-VGLIAGQCRCK 412 (525)
T ss_dssp C--------EEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGG-GTBCSSCCCBC
T ss_pred C--------CcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCC-cCCCCCccCCC
Confidence 4 333211 1111223434555555321 1111100000 00011111233
Q ss_pred cCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCC---CCCCCCCCccccCCCCcEEcCcCcCCccccC
Q psy620 253 NLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGR---NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRN 329 (1290)
Q Consensus 253 n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~---~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~ 329 (1290)
....+++|..|++||+|.. |.....|...+ .+.|.+++.|.. .+++| .|++||+|..
T Consensus 413 ~g~~G~~C~~C~~Gy~G~~----------------c~~~~~C~~C~C~~~gtc~~~~~Cd~--~tg~C--~C~~g~~G~~ 472 (525)
T 4aqs_A 413 LHVEGERCDVCKEGFYDLS----------------AEDPYGCKSCACNPLGTIPGGNPCDS--ETGYC--YCKRLVTGQR 472 (525)
T ss_dssp TTEETTTTCEECTTEECCC----------------TTSTTSSEECCCCTTTBCCSSCCBCT--TTCCB--CBCTTCCSTT
T ss_pred CCCCCCcccCCCCCCcCCC----------------CCCCCCCccCCCCCCceecCCCcccC--CCCEE--ECCCCCcCCC
Confidence 3333334422555555444 33333443322 122333344433 34578 8999998655
Q ss_pred CCCCCCCCCC----CCCCCCCCCCCCCCCeEeee-cCCceEEecCCCcccCCCCcC
Q psy620 330 VSVGCQSQNF----GADVCPDGTRCDRNAKCTRI-LGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 330 ~g~~C~~~~~----~id~C~~~~~C~~~g~C~~~-~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
+. .|....+ .++.|. ..+|.+++.|... ...+++|.|++||+| .+|+
T Consensus 473 Ce-~C~~G~~g~~~~~~~C~-~C~C~~~gs~~~~C~~~tG~C~C~~G~~G--~~Ce 524 (525)
T 4aqs_A 473 CD-QCLPQHWGLSNDLDGCR-PCDCDLGGALNNSCSEDSGQCSCLPHMIG--RQCN 524 (525)
T ss_dssp TC-C----------------------------------------------------
T ss_pred cc-cCCCCccCCCCCCCCCc-CCCCCCCCccCCccCCCCCeeECCCCCcC--CCCC
Confidence 42 2332111 134565 3567777766543 123468999999999 8886
No 42
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.89 E-value=7.9e-10 Score=108.18 Aligned_cols=100 Identities=26% Similarity=0.540 Sum_probs=72.2
Q ss_pred ccccCCccCCCCC--------CCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCC
Q psy620 232 RCHDIDECDLAEP--------CDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCD 303 (1290)
Q Consensus 232 ~C~dideC~~~~p--------C~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~ 303 (1290)
++.++++|. .+| |.++++|+++.++|+|. |++||+|..|+. -.++++|... ++.|.
T Consensus 2 ~~~d~d~C~-~~p~~~~C~~~C~~~g~C~~~~~~y~C~-C~~G~~G~~C~~-------------~~~~~~C~~~-~~~C~ 65 (114)
T 1aut_L 2 KHVDGDQCL-VLPLEHPCASLCCGHGTCIDGIGSFSCD-CRSGWEGRFCQR-------------EVSFLNCSLD-NGGCT 65 (114)
T ss_dssp ------CCC-CCSSCCSSSSTTTTSEEECCCSSCCCEE-ECTTEESTTSCE-------------ECCSSSSSSG-GGGCS
T ss_pred cceeccccc-CCCccccccccCCCcCCCCCCCCCcEee-CCCCCcCCCcCc-------------CCcCCcCcCC-CCCCC
Confidence 356778887 667 99999999999999999 999999988652 1224678865 55686
Q ss_pred CCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeee
Q psy620 304 SNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRI 359 (1290)
Q Consensus 304 ~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~ 359 (1290)
. +|+++.++|+| .|++||++...++.|+.. . ..+|.+.+.|+..
T Consensus 66 ~--~C~n~~g~y~C--~C~~G~~~~~~g~~C~~~----~----~~pC~~~~~~i~~ 109 (114)
T 1aut_L 66 H--YCLEEVGWRRC--SCAPGYKLGDDLLQCHPA----V----KFPCGRPWKRMEK 109 (114)
T ss_dssp S--EEEECSSSEEE--ECCTTEEECTTSSCEEEC----S----SSCTTCCC-----
T ss_pred C--EeECCCCCEEe--ECCCCeeECCCCCccCcC----c----ccCCCCCCccCCC
Confidence 3 99999999999 999999998888899872 1 2468777777654
No 43
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.87 E-value=1.9e-08 Score=127.72 Aligned_cols=179 Identities=27% Similarity=0.657 Sum_probs=120.2
Q ss_pred CCCCCCeeecCCCCcccc---cCCCCcccCCCCCCCCCCCCCC--CCCCCCeeccCCCCccccc----CCCCCCCCCCCc
Q psy620 113 PCFPGVECRDTREGPRCM---RCPDGYVGDGIHCKPGVTCNMR--PCFQGVQCFDTVEGYTCGP----CPSGYTGDGERC 183 (1290)
Q Consensus 113 pC~~gg~C~~~~g~y~C~---~C~~Gy~Gdg~~CedideC~~~--pC~~gg~C~n~~g~y~C~~----C~~Gy~Gdg~~C 183 (1290)
.|.++ .|++. +++|. .|..|.-. ..|. ..+|... .|.+ +.|++ .+++| . |+.|.-+. .|
T Consensus 182 ~C~~g-~Ci~~--~~~CDg~~dC~dgsDE--~~C~-~~~C~~~~f~C~~-g~Ci~--~~~~C-dg~~dC~dgsde~--~C 249 (699)
T 1n7d_A 182 HCLSG-ECIHS--SWRCDGGPDCKDKSDE--ENCA-VATCRPDEFQCSD-GNCIH--GSRQC-DREYDCKDMSDEV--GC 249 (699)
T ss_dssp CCSSS-CCCST--TCTTSSSCCSTTSCSS--CSCC-CCCCCSSEEESSS-SCEEE--TTCCS-SSCCCSSSSCSSS--ST
T ss_pred ecCCC-ceEec--hhccCCCCCCCCCccc--ccCC-CcccCCCcEecCC-Cceee--eeccc-CCCCCCCCCCccC--CC
Confidence 45543 66654 45552 35555433 4554 2345442 4653 57876 46777 5 77776554 67
Q ss_pred eecccCCC---CCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCC-CCCCCCCcccccCCCCee
Q psy620 184 QRIGGCSR---NPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDL-AEPCDPRVQCTNLFPGYR 259 (1290)
Q Consensus 184 ~~ideC~~---~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~-~~pC~~~g~C~n~~gsy~ 259 (1290)
..+..|.. .+|.++ .|+.....-.+.+ .|+.|+.+....| +++||.. ...|. +.|+++.++|+
T Consensus 250 ~~~~~C~~~~~~~C~~g---------~Ci~~~~~Cd~~~-dC~dgsDe~~~~C-~~~eC~~~~~~C~--~~C~~~~~~~~ 316 (699)
T 1n7d_A 250 VNVTLCEGPNKFKCHSG---------ECITLDKVCNMAR-DCRDWSDEPIKEC-GTNECLDNNGGCS--HVCNDLKIGYE 316 (699)
T ss_dssp TCCCCCCSTTCCCCTTS---------CCCCSSCCSCSSC-CSSSSCSCCCSSC-CCCCTTSSTTTSC--TTCCCCTTCCC
T ss_pred CCCCcccCCCceecCCC---------cEeCCcccccccc-eecCccccccccc-ccccccccccCcC--CCcccCCCCcE
Confidence 66666732 357664 6765433223456 7888877654556 5788873 23575 68999999999
Q ss_pred cccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 260 CDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 260 C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
|. |++||++. .+..|++|+||.. .+.|. ++|+|+.|+|+| .|++||++...+++|..
T Consensus 317 C~-C~~G~~~~-------------~~~~C~dideC~~--~~~C~--~~C~n~~g~y~C--~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 317 CL-CPDGFQLV-------------AQRRCEDIDECQD--PDTCS--QLCVNLEGGYKC--QCEEGFQLDPHTKACKA 373 (699)
T ss_dssp CC-CCSSSCCC-------------SSSCCCCCCCCSS--SSSCT--TTCCBCSSCBCC--CCCSSCBCCSSCCCCBC
T ss_pred Ee-CCCCeEcC-------------CCCcccCccccCC--CCccc--cccccCCCCeee--eeecccccCCCCCcccc
Confidence 99 99999973 2467999999984 34596 699999999999 99999998766666654
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.86 E-value=3.6e-10 Score=120.61 Aligned_cols=87 Identities=28% Similarity=0.738 Sum_probs=35.8
Q ss_pred CcccCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCC-C-CCCCCC--CCCCCCeeccCCCCcccccCCCCC
Q psy620 101 PIVKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKP-G-VTCNMR--PCFQGVQCFDTVEGYTCGPCPSGY 176 (1290)
Q Consensus 101 ~~~~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ced-i-deC~~~--pC~~gg~C~n~~g~y~C~~C~~Gy 176 (1290)
.++++++|. ++||.++++|++..++|+| .|++||+| ..|++ + ++|... +|.+ +|+++.++|+| .|++||
T Consensus 38 ~c~dideC~-~~pC~ngg~C~n~~g~y~C-~C~~Gf~G--~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C-~C~~Gy 110 (195)
T 1nfu_B 38 KYKDGDQCE-TSPCQNQGKCKDGLGEYTC-TCLEGFEG--KNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGY 110 (195)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTE
T ss_pred cCCCCcccC-CCCCCCCCEeECCCCCeeE-eCCCCcee--ccccccccccccCCCCCCCC--EeECCCCCeEE-ECCCCc
Confidence 356889999 8999999999999999999 99999998 89995 6 899874 5665 99999999999 999999
Q ss_pred C--CCCCCceecccCCCCCCCCC
Q psy620 177 T--GDGERCQRIGGCSRNPCAQG 197 (1290)
Q Consensus 177 ~--Gdg~~C~~ideC~~~pC~~g 197 (1290)
+ ++++.|+.+. ..||.+.
T Consensus 111 ~l~~dG~~C~~~~---~~PC~~~ 130 (195)
T 1nfu_B 111 TLADNGKACIPTG---PYPCGKQ 130 (195)
T ss_dssp EECTTSSCEEESS---SSCTTCC
T ss_pred eeCCCCCccccCC---CCCCCCC
Confidence 9 4556998753 3577665
No 45
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.85 E-value=1e-09 Score=102.10 Aligned_cols=80 Identities=33% Similarity=0.938 Sum_probs=64.0
Q ss_pred cCCccCCCCC--CCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCC
Q psy620 235 DIDECDLAEP--CDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTE 312 (1290)
Q Consensus 235 dideC~~~~p--C~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~ 312 (1290)
+++||. ..+ | ++++|+++.++|+|. |++||++.. .+..|++++||...+ |. ++|+++.
T Consensus 2 dideC~-~~~~~C-~~~~C~n~~g~y~C~-C~~G~~~~~------------~g~~C~dideC~~~~---C~--~~C~n~~ 61 (87)
T 1z6c_A 2 DVDECS-LKPSIC-GTAVCKNIPGDFECE-CPEGYRYNL------------KSKSCEDIDECSENM---CA--QLCVNYP 61 (87)
T ss_dssp CSCSSS-SSSSSB-TTSSCCCBTTBCCCS-SSTTCEEET------------TTTEEECCCHHHHSC---CS--SEECCCS
T ss_pred cccccc-CCCCCC-CCCEeECCCCCEEEE-CCCCceECC------------CCCcCCCcCeeCCCC---CC--CEEEccC
Confidence 689998 444 8 789999999999999 999999754 346689999998654 97 7999999
Q ss_pred CCcEEcCcC--cCCccccCCCCCCCC
Q psy620 313 GSFTCTSLC--RNSYMVRNVSVGCQS 336 (1290)
Q Consensus 313 gsy~C~~~C--~~Gy~g~~~g~~C~~ 336 (1290)
++|+| .| .+||.....+..|++
T Consensus 62 g~y~C--~C~g~~G~~~~~~~~~C~d 85 (87)
T 1z6c_A 62 GGYTC--YCDGKKGFKLAQDQKSCEV 85 (87)
T ss_dssp SSCCE--ECCSSSCCBCCTTSSSCBC
T ss_pred CCEEE--ECCCCcCCcccCCCCcceE
Confidence 99999 99 467765554555554
No 46
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.85 E-value=1.1e-09 Score=107.02 Aligned_cols=87 Identities=25% Similarity=0.566 Sum_probs=67.3
Q ss_pred ccCCCCCCCCC--------CCCCCeeecCCCCcccccCCCCcccCCCCCCCC---CCCCCCCCCCCCeeccCCCCccccc
Q psy620 103 VKKPTCATDNP--------CFPGVECRDTREGPRCMRCPDGYVGDGIHCKPG---VTCNMRPCFQGVQCFDTVEGYTCGP 171 (1290)
Q Consensus 103 ~~~d~C~~~~p--------C~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Cedi---deC~~~pC~~gg~C~n~~g~y~C~~ 171 (1290)
+++++|+ .+| |.++++|+++.++|+| .|++||+| ..|+++ ++|...+.....+|+++.++|+| .
T Consensus 4 ~d~d~C~-~~p~~~~C~~~C~~~g~C~~~~~~y~C-~C~~G~~G--~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C-~ 78 (114)
T 1aut_L 4 VDGDQCL-VLPLEHPCASLCCGHGTCIDGIGSFSC-DCRSGWEG--RFCQREVSFLNCSLDNGGCTHYCLEEVGWRRC-S 78 (114)
T ss_dssp ----CCC-CCSSCCSSSSTTTTSEEECCCSSCCCE-EECTTEES--TTSCEECCSSSSSSGGGGCSSEEEECSSSEEE-E
T ss_pred eeccccc-CCCccccccccCCCcCCCCCCCCCcEe-eCCCCCcC--CCcCcCCcCCcCcCCCCCCCCEeECCCCCEEe-E
Confidence 4678898 788 9999999999999999 99999999 679953 46876432223399999999999 9
Q ss_pred CCCCCCC--CCCCceecccCCCCCCCCC
Q psy620 172 CPSGYTG--DGERCQRIGGCSRNPCAQG 197 (1290)
Q Consensus 172 C~~Gy~G--dg~~C~~ideC~~~pC~~g 197 (1290)
|++||+| +++.|+.+ ...||.++
T Consensus 79 C~~G~~~~~~g~~C~~~---~~~pC~~~ 103 (114)
T 1aut_L 79 CAPGYKLGDDLLQCHPA---VKFPCGRP 103 (114)
T ss_dssp CCTTEEECTTSSCEEEC---SSSCTTCC
T ss_pred CCCCeeECCCCCccCcC---cccCCCCC
Confidence 9999994 46688864 34678877
No 47
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.84 E-value=9.7e-10 Score=102.29 Aligned_cols=69 Identities=29% Similarity=0.706 Sum_probs=59.5
Q ss_pred cCCCCCCCCC--CCCCCeeecCCCCcccccCCCCcccC--CCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCC
Q psy620 104 KKPTCATDNP--CFPGVECRDTREGPRCMRCPDGYVGD--GIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGD 179 (1290)
Q Consensus 104 ~~d~C~~~~p--C~~gg~C~~~~g~y~C~~C~~Gy~Gd--g~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd 179 (1290)
++++|+ .+| | ++++|+++.++|+| .|++||++. +..|+++++|..+||. ++|+++.++|+| .|+ ||.|.
T Consensus 2 dideC~-~~~~~C-~~~~C~n~~g~y~C-~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C-~C~-g~~G~ 74 (87)
T 1z6c_A 2 DVDECS-LKPSIC-GTAVCKNIPGDFEC-ECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTC-YCD-GKKGF 74 (87)
T ss_dssp CSCSSS-SSSSSB-TTSSCCCBTTBCCC-SSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCE-ECC-SSSCC
T ss_pred cccccc-CCCCCC-CCCEeECCCCCEEE-ECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEE-ECC-CCcCC
Confidence 578998 555 9 78899999999999 999999943 4899999999999997 699999999999 996 55543
No 48
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.81 E-value=6e-10 Score=112.21 Aligned_cols=86 Identities=28% Similarity=0.748 Sum_probs=34.3
Q ss_pred CcccCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCCC-C-CCCCCC--CCCCCCeeccCCCCcccccCCCCC
Q psy620 101 PIVKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKP-G-VTCNMR--PCFQGVQCFDTVEGYTCGPCPSGY 176 (1290)
Q Consensus 101 ~~~~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ced-i-deC~~~--pC~~gg~C~n~~g~y~C~~C~~Gy 176 (1290)
.++++++|+ ++||.++++|++..++|+| .|++||+| ..|++ + ++|... +|.+ +|+++.++|+| .|++||
T Consensus 38 ~c~d~d~C~-~~pC~n~g~C~~~~~~y~C-~C~~G~~G--~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C-~C~~Gy 110 (134)
T 2vh0_B 38 KYKDGDQCE-TSPCQNQGKCKDGLGEYTC-TCLEGFEG--KNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGY 110 (134)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTE
T ss_pred cCCCcCcCC-CCCCCCcCCcccCCCCEEe-eCCCCccC--CccccCCCCccccCCCCCCC--EeECCCCCEEE-ECCCCc
Confidence 356789999 8999999999999999999 99999998 79996 6 889874 4665 99999999999 999999
Q ss_pred C--CCCCCceecccCCCCCCCC
Q psy620 177 T--GDGERCQRIGGCSRNPCAQ 196 (1290)
Q Consensus 177 ~--Gdg~~C~~ideC~~~pC~~ 196 (1290)
+ +++++|+.+++ .||..
T Consensus 111 ~l~~~g~~C~~~~~---~pC~~ 129 (134)
T 2vh0_B 111 TLADNGKACIPTGP---YPCGK 129 (134)
T ss_dssp EECTTSSCEEESSS---SCTTC
T ss_pred EECCCCCccCcCCC---cCCCC
Confidence 9 44568987543 56654
No 49
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.80 E-value=1.9e-09 Score=109.71 Aligned_cols=83 Identities=27% Similarity=0.592 Sum_probs=71.9
Q ss_pred CCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee-cccCCCCCCCCCCCCCCccee---eeccCCCCC-c
Q psy620 142 HCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR-IGGCSRNPCAQGKLNEKTRCV---RCDDIPEHP-Y 216 (1290)
Q Consensus 142 ~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-ideC~~~pC~~g~~~~~~~Cg---~C~~~~~~g-~ 216 (1290)
.|.++++|+.+||.++++|+++.++|+| .|++||+|. .|+. +++|...+|.++ + +|++.. + +
T Consensus 43 ~c~did~C~~~pC~n~g~C~~~~g~y~C-~C~~G~~G~--~C~~~~~~c~~c~~~~~--------~C~~~C~~~~--g~~ 109 (142)
T 2c4f_L 43 SYSDGDQCASSPCQNGGSCKDQLQSYIC-FCLPAFEGR--NCETHKDDQLICVNENG--------GCEQYCSDHT--GTK 109 (142)
T ss_dssp HHTTCCGGGGCCCCTTCEEEEETTEEEE-ECCTTEEST--TSCEEGGGCCSTTTGGG--------GCSSEEECCT--TSC
T ss_pred cCCccCcCcCCCcCCCCEEeCCCCCEEe-eCCCCccCC--ccccCccccccccCCCC--------CccCEeECCC--CCC
Confidence 5788999999999999999999999999 999999987 9997 788877777776 4 798765 5 8
Q ss_pred eecCCCCCCCc--CCCCccccCCc
Q psy620 217 YRCGSCPEGTT--GNGTRCHDIDE 238 (1290)
Q Consensus 217 y~C~~C~~Gy~--Gdg~~C~dide 238 (1290)
|+| .|++||+ ++|.+|+++++
T Consensus 110 y~C-~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 110 RSC-RCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp CEE-ECCTTEEECTTSSCEEESSS
T ss_pred EEE-ECCCCceECCCCCCCCCCCc
Confidence 999 9999999 45689987765
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.77 E-value=1.2e-08 Score=121.63 Aligned_cols=138 Identities=26% Similarity=0.685 Sum_probs=98.7
Q ss_pred ceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCC
Q psy620 216 YYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECA 295 (1290)
Q Consensus 216 ~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~ 295 (1290)
.+.| .|++||.| ..|+. .|. +|.++++|.+ .+++|. |++||+|..|+..... ...+..|. ++|.
T Consensus 184 ~~~c-~C~~g~~G--~~C~~--~C~---~C~~~G~C~~--~~g~C~-C~~G~~G~~Ce~~C~~---g~~g~~C~--~~C~ 247 (423)
T 2gy5_A 184 LIVR-RCEAQKWG--PECNH--LCT---ACMNNGVCHE--DTGECI-CPPGFMGRTCEKACEL---HTFGRTCK--ERCS 247 (423)
T ss_dssp EEEC-SSCTTEES--TTSCE--ECC---CCCTTCEECT--TTCCEE-CCTTEESTTSCEECCT---TEESTTSC--EECC
T ss_pred ccCC-cCCCCCCC--CCCCC--CCC---CCCCCCEEEC--CCCcEe-CCCCccCCCcccccCC---CCCCCCcC--ccCC
Confidence 3468 89999999 67763 453 8999999987 457999 9999999998842100 00122343 2565
Q ss_pred CCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccC
Q psy620 296 DGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGD 375 (1290)
Q Consensus 296 ~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~Gd 375 (1290)
. .+.|.++++|. .++|+| .|++||+|..+...|....+ -..|....+|.++++|.+. +.|.|++||+|
T Consensus 248 ~--~~~C~~~g~C~--~~~~~C--~C~~G~~G~~C~~~C~~G~~-G~~C~~~C~C~ngg~C~~~----~~C~C~~G~~G- 315 (423)
T 2gy5_A 248 G--QEGCKSYVFCL--PDPYGC--SCATGWKGLQCNEACHPGFY-GPDCKLRCSCNNGEMCDRF----QGCLCSPGWQG- 315 (423)
T ss_dssp S--TTTTTTCCEEE--TTTTEE--ECCBTCBSGGGCBCCCTTBC-SBTTCCBCCCTTCCEEETT----TEEECCTTCBS-
T ss_pred C--CCCCCCCCEEC--CCCCeE--EeCCCcccccccCccCCCCc-CCcccccccCCCCCEecCC----CceECCCCCcC-
Confidence 3 34588888885 578999 99999998776655655322 2456533479999999875 24999999999
Q ss_pred CCCcCCc
Q psy620 376 GQFCGRD 382 (1290)
Q Consensus 376 G~~Ce~~ 382 (1290)
.+|+..
T Consensus 316 -~~Ce~~ 321 (423)
T 2gy5_A 316 -LQCERE 321 (423)
T ss_dssp -TTSCBC
T ss_pred -CCCccC
Confidence 899743
No 51
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.75 E-value=1.5e-09 Score=115.74 Aligned_cols=84 Identities=27% Similarity=0.732 Sum_probs=34.5
Q ss_pred CccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccC-CCCCCCCCCCCCCCCccc
Q psy620 231 TRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDI-DECADGRNGGCDSNSMCT 309 (1290)
Q Consensus 231 ~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~di-deC~~~~~g~C~~~g~C~ 309 (1290)
..|.++++|. .+||.++++|++..++|+|. |++||+|..|+ .++ ++|... ++.|.+ +|+
T Consensus 37 ~~c~dideC~-~~pC~ngg~C~n~~g~y~C~-C~~Gf~G~~Ce---------------~~i~deC~~~-~~~C~~--~C~ 96 (195)
T 1nfu_B 37 NKYKDGDQCE-TSPCQNQGKCKDGLGEYTCT-CLEGFEGKNCE---------------LFTRKLCSLD-NGDCDQ--FCH 96 (195)
T ss_dssp -------------------------------------------------------------CCGGGTG-GGGCSS--EEE
T ss_pred ccCCCCcccC-CCCCCCCCEeECCCCCeeEe-CCCCceecccc---------------ccccccccCC-CCCCCC--EeE
Confidence 3688999998 89999999999999999999 99999998743 235 889875 456874 999
Q ss_pred cCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 310 NTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 310 n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
++.++|+| .|++||++...+..|+.
T Consensus 97 n~~gsy~C--~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 97 EEQNSVVC--SCARGYTLADNGKACIP 121 (195)
T ss_dssp EETTEEEE--ECCTTEEECTTSSCEEE
T ss_pred CCCCCeEE--ECCCCceeCCCCCcccc
Confidence 99999999 99999998777888987
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.74 E-value=7.3e-09 Score=118.85 Aligned_cols=79 Identities=30% Similarity=0.788 Sum_probs=69.1
Q ss_pred cCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCC-CCCCCCC---CCCCCCCeeccCCCCcccccCCCCCCCC
Q psy620 104 KKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK-PGVTCNM---RPCFQGVQCFDTVEGYTCGPCPSGYTGD 179 (1290)
Q Consensus 104 ~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce-dideC~~---~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd 179 (1290)
++++|. ++||.++++|.+..++|+| .|++||+| ..|+ ++++|.. +||.+ +|+++.++|+| .|++||++.
T Consensus 4 d~~~C~-~~pC~~~g~C~~~~~~~~C-~C~~g~~g--~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C-~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPCI-SQPCLHNGSCQDSIWGYTC-TCSPGYEG--SNCELAKNECHPERTDGCQH--FCLPGQESYTC-SCAQGYRLG 76 (317)
T ss_dssp --CCTT-SCCCTTTCCCCCCSSSCCC-CCSSSCCS--SSSCCCSSSCCTTCTTSCSS--EEECCSSSCEE-ECCTTEECC
T ss_pred cCCcCC-CCCCCCCCEeECCCCCeEE-ECCCCCcC--CccccCcccCCCCCCCCCcC--ccccCCCeeEE-ecccccccc
Confidence 568999 9999999999999999999 99999998 8999 9999997 78987 99999999999 999999974
Q ss_pred --CCCceecccC
Q psy620 180 --GERCQRIGGC 189 (1290)
Q Consensus 180 --g~~C~~ideC 189 (1290)
++.|..+++|
T Consensus 77 ~~~~~C~~~~~c 88 (317)
T 3h5c_B 77 EDHKQCVPHDQC 88 (317)
T ss_dssp TTSSCCEECSSC
T ss_pred cccccccccccc
Confidence 3567666555
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.74 E-value=4.6e-08 Score=124.17 Aligned_cols=138 Identities=24% Similarity=0.669 Sum_probs=101.0
Q ss_pred eeeccCCCCCceecC---CCCCCCcCCCCccccCCccCC--CCCCCCCcccccCCC--CeecccCCCCCccCCCCccccc
Q psy620 206 VRCDDIPEHPYYRCG---SCPEGTTGNGTRCHDIDECDL--AEPCDPRVQCTNLFP--GYRCDPCPAGFTGSTGVQGVGL 278 (1290)
Q Consensus 206 g~C~~~~~~g~y~C~---~C~~Gy~Gdg~~C~dideC~~--~~pC~~~g~C~n~~g--sy~C~~C~~Gy~G~~Ce~~~~~ 278 (1290)
+.|+.. +++|. .|+.|.-. ..|..+.+|.. ...|.+ +.|++... .+.+. |+.|+.+..
T Consensus 225 g~Ci~~----~~~Cdg~~dC~dgsde--~~C~~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~d-C~dgsDe~~------- 289 (699)
T 1n7d_A 225 GNCIHG----SRQCDREYDCKDMSDE--VGCVNVTLCEGPNKFKCHS-GECITLDKVCNMARD-CRDWSDEPI------- 289 (699)
T ss_dssp SCEEET----TCCSSSCCCSSSSCSS--SSTTCCCCCCSTTCCCCTT-SCCCCSSCCSCSSCC-SSSSCSCCC-------
T ss_pred Cceeee----ecccCCCCCCCCCCcc--CCCCCCCcccCCCceecCC-CcEeCCcccccccce-ecCcccccc-------
Confidence 367653 56772 27777655 67876777842 357875 67876432 23566 777765443
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEee
Q psy620 279 EHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTR 358 (1290)
Q Consensus 279 ~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~ 358 (1290)
..| +++||... ++.|. ++|+++.++|+| .|++||++ ..++.|++ +++|....+|++ +|++
T Consensus 290 -------~~C-~~~eC~~~-~~~C~--~~C~~~~~~~~C--~C~~G~~~-~~~~~C~d----ideC~~~~~C~~--~C~n 349 (699)
T 1n7d_A 290 -------KEC-GTNECLDN-NGGCS--HVCNDLKIGYEC--LCPDGFQL-VAQRRCED----IDECQDPDTCSQ--LCVN 349 (699)
T ss_dssp -------SSC-CCCCTTSS-TTTSC--TTCCCCTTCCCC--CCCSSSCC-CSSSCCCC----CCCCSSSSSCTT--TCCB
T ss_pred -------ccc-cccccccc-ccCcC--CCcccCCCCcEE--eCCCCeEc-CCCCcccC----ccccCCCCcccc--cccc
Confidence 224 67899887 66786 689999999999 99999987 55788997 899986688964 8999
Q ss_pred ecCCceEEecCCCccc--CCCCc
Q psy620 359 ILGNHYACKCDNGWAG--DGQFC 379 (1290)
Q Consensus 359 ~~~gsy~C~C~~Gy~G--dG~~C 379 (1290)
+ .++|+|.|++||++ ++++|
T Consensus 350 ~-~g~y~C~C~~G~~~~~~~~~C 371 (699)
T 1n7d_A 350 L-EGGYKCQCEEGFQLDPHTKAC 371 (699)
T ss_dssp C-SSCBCCCCCSSCBCCSSCCCC
T ss_pred C-CCCeeeeeecccccCCCCCcc
Confidence 8 89999999999997 33445
No 54
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.72 E-value=7.1e-09 Score=127.29 Aligned_cols=236 Identities=14% Similarity=0.230 Sum_probs=88.6
Q ss_pred CCCeeccCCCCcccccCCCCCCCCCCCcee-cccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccc
Q psy620 156 QGVQCFDTVEGYTCGPCPSGYTGDGERCQR-IGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCH 234 (1290)
Q Consensus 156 ~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~ 234 (1290)
....++.....++| .|++||+|. .|+. ++.|...||..+ +|.... ..+.| .|.. .+ ..|.
T Consensus 268 g~~~~~~g~~~g~C-~C~~G~~G~--~Ce~C~~g~~~~p~~~~---------~c~~~~--~~~~C-~C~~--~~--~~C~ 328 (525)
T 4aqs_A 268 GVNEEVEGMVHGHC-MCRHNTKGL--NCELCMDFYHDLPWRPA---------EGRNSN--ACKKC-NCNE--HS--SSCH 328 (525)
T ss_dssp -----CCSCCCCEE-CCCTTEESS--SSCEECTTCCSSCCCCC---------BTTBCC--CCCCC-CCTT--SC--SEEE
T ss_pred CcccCCCCCcCccc-cCcCCCcCC--CCcCCCCccCCCccCCC---------cccCCC--ccccc-ccCC--CC--CCCC
Confidence 33345555667899 999999999 9987 777777787654 343332 24455 5642 22 4453
Q ss_pred -cCCccCCCCCCCCCccccc---CCCCeecccCCCCCccCCCCccccccc---------cccCCCCcccCCCCCCCCCCC
Q psy620 235 -DIDECDLAEPCDPRVQCTN---LFPGYRCDPCPAGFTGSTGVQGVGLEH---------AVRFRQTCVDIDECADGRNGG 301 (1290)
Q Consensus 235 -dideC~~~~pC~~~g~C~n---~~gsy~C~~C~~Gy~G~~Ce~~~~~~~---------~~~~~~~C~dideC~~~~~g~ 301 (1290)
+...|. ...+.+++.|.+ ...+..|..|.+||.+..+........ .......|.....+... .
T Consensus 329 ~d~~~c~-~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~---~ 404 (525)
T 4aqs_A 329 FDMAVFL-ATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVG---L 404 (525)
T ss_dssp ECHHHHH-HTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGT---B
T ss_pred CCccccc-ccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcC---C
Confidence 222232 334444444422 111122333444444333211000000 00001111111100000 0
Q ss_pred CCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeec---CCceEEecCCCcccCCCC
Q psy620 302 CDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRIL---GNHYACKCDNGWAGDGQF 378 (1290)
Q Consensus 302 C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~---~gsy~C~C~~Gy~GdG~~ 378 (1290)
+.....|.....+++|. +|++||++.. |.. ...|. ..+|.++++|.+.. ..+++|.|++||+| ..
T Consensus 405 ~~~~C~C~~g~~G~~C~-~C~~Gy~G~~----c~~----~~~C~-~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G--~~ 472 (525)
T 4aqs_A 405 IAGQCRCKLHVEGERCD-VCKEGFYDLS----AED----PYGCK-SCACNPLGTIPGGNPCDSETGYCYCKRLVTG--QR 472 (525)
T ss_dssp CSSCCCBCTTEETTTTC-EECTTEECCC----TTS----TTSSE-ECCCCTTTBCCSSCCBCTTTCCBCBCTTCCS--TT
T ss_pred CCCccCCCCCCCCCccc-CCCCCCcCCC----CCC----CCCCc-cCCCCCCceecCCCcccCCCCEEECCCCCcC--CC
Confidence 11122355555566775 7888887543 332 22232 12344444443210 23568999999999 88
Q ss_pred cCCcCCCCCCC--CCCCCCCCCCCCCC-ccccCCCCCCCCccccCCCCCCCCCC
Q psy620 379 CGRDTDLDGWP--DYDLACPDRKCRKD-NCVHIPNSGINNHADNCPRNANPDQR 429 (1290)
Q Consensus 379 Ce~~~d~d~~~--~~~~~C~~~~C~ng-~C~~~~gs~~~~~~C~C~~Gy~G~~~ 429 (1290)
|++... ..+. .....|...+|.++ .|...... ..++|.|++||+|..+
T Consensus 473 Ce~C~~-G~~g~~~~~~~C~~C~C~~~gs~~~~C~~--~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 473 CDQCLP-QHWGLSNDLDGCRPCDCDLGGALNNSCSE--DSGQCSCLPHMIGRQC 523 (525)
T ss_dssp TCC---------------------------------------------------
T ss_pred cccCCC-CccCCCCCCCCCcCCCCCCCCccCCccCC--CCCeeECCCCCcCCCC
Confidence 964221 1111 11234666667654 33332111 1346999999988753
No 55
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.71 E-value=2.8e-09 Score=103.21 Aligned_cols=72 Identities=29% Similarity=0.869 Sum_probs=34.4
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecC
Q psy620 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCD 369 (1290)
Q Consensus 290 dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~ 369 (1290)
+++||... ++.|. ++|+++.++|+| .|++||++. .+..|++ +++|...++|. ++|+++ .++|+|.|+
T Consensus 28 d~neC~~~-~~~C~--~~C~n~~g~y~C--~C~~Gy~g~-~g~~C~d----ideC~~~~~C~--~~C~n~-~gsy~C~C~ 94 (107)
T 2w2n_E 28 GTNECLDN-NGGCS--YVCNDLKIGYEC--LCPDGFQLV-AQRRCED----IDECQDPDTCS--QLCVNL-EGGYKCQCE 94 (107)
T ss_dssp SCCGGGTG-GGGCS--SEEECCSBSCEE--ECCTTCEEE-TTTEEEC---------------------------------
T ss_pred cCccCcCC-CCCCC--CEeEeCCCCeEE--ECCCCcccc-CCCcccc----ccccCCCCCcC--CeeecC-CCCEEEECC
Confidence 68999876 56686 699999999999 999999874 3578997 89998557896 699998 899999999
Q ss_pred CCccc
Q psy620 370 NGWAG 374 (1290)
Q Consensus 370 ~Gy~G 374 (1290)
+||++
T Consensus 95 ~Gy~~ 99 (107)
T 2w2n_E 95 EGFQL 99 (107)
T ss_dssp -----
T ss_pred CCceE
Confidence 99997
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.68 E-value=1.6e-08 Score=129.66 Aligned_cols=106 Identities=28% Similarity=0.692 Sum_probs=77.4
Q ss_pred eeccCCCCCceecCCCCCCCcCCCCccccCCccCC-CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCC
Q psy620 207 RCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDL-AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFR 285 (1290)
Q Consensus 207 ~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~-~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~ 285 (1290)
.|+.....-...+ .|+.|+-.....|. +++|.. ...|. +.|+++.++|+|. |++||.+. .+
T Consensus 285 ~Ci~~~~~Cd~~~-dC~dgsDe~~~~C~-~~~C~~~~~~C~--~~C~~~~~~y~C~-C~~Gy~l~-------------~g 346 (791)
T 3m0c_C 285 ECITLDKVCNMAR-DCRDWSDEPIKECG-TNECLDNNGGCS--HVCNDLKIGYECL-CPDGFQLV-------------AQ 346 (791)
T ss_dssp CCCCSSCCSCSSC-CSSSSCSCCCTTBS-CCSTTTGGGGCS--SEEEECSBSEEEE-CCTTCEEE-------------TT
T ss_pred cccccccccCCcc-ccccccCccccccc-cccccccccCcc--ccccCCCCCcccC-CCCCCccC-------------CC
Confidence 5665433223355 68887766444563 566752 12343 5899999999999 99999862 24
Q ss_pred CCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 286 QTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 286 ~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
..|.+|+||.. .+.|. ++|+|+.|+|+| .|++||.+...++.|..
T Consensus 347 ~~C~dideC~~--~~~C~--~~C~n~~gsy~C--~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 347 RRCEDIDECQD--PDTCS--QLCVNLEGGYKC--QCEEGFQLDPHTKACKA 391 (791)
T ss_dssp TEEECCCCCSS--SSSCT--TTCCBCSSCBCC--CCCSSEECCSSCCCCEE
T ss_pred CccccCcccCC--CCCCC--CeeecCCCCcee--ecCCCCEeCCCCceeee
Confidence 66899999984 34586 699999999999 99999998777777776
No 57
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.67 E-value=3.2e-09 Score=106.94 Aligned_cols=84 Identities=27% Similarity=0.732 Sum_probs=34.0
Q ss_pred CccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccC-CCCCCCCCCCCCCCCccc
Q psy620 231 TRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDI-DECADGRNGGCDSNSMCT 309 (1290)
Q Consensus 231 ~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~di-deC~~~~~g~C~~~g~C~ 309 (1290)
..|.++++|. .+||.++++|+++.++|+|. |++||+|..|+ ..+ ++|... .+.|.+ +|+
T Consensus 37 ~~c~d~d~C~-~~pC~n~g~C~~~~~~y~C~-C~~G~~G~~C~---------------~~i~d~C~~~-~~~C~~--~C~ 96 (134)
T 2vh0_B 37 NKYKDGDQCE-TSPCQNQGKCKDGLGEYTCT-CLEGFEGKNCE---------------LFTRKLCSLD-NGDCDQ--FCH 96 (134)
T ss_dssp -------------------------------------------------------------CCGGGTG-GGGCSS--EEE
T ss_pred ccCCCcCcCC-CCCCCCcCCcccCCCCEEee-CCCCccCCccc---------------cCCCCccccC-CCCCCC--EeE
Confidence 3688999998 88999999999999999999 99999988743 226 789875 456874 999
Q ss_pred cCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 310 NTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 310 n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
++.++|+| .|++||++...++.|+.
T Consensus 97 ~~~g~y~C--~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 97 EEQNSVVC--SCARGYTLADNGKACIP 121 (134)
T ss_dssp EETTEEEE--ECCTTEEECTTSSCEEE
T ss_pred CCCCCEEE--ECCCCcEECCCCCccCc
Confidence 99999999 99999998777888986
No 58
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.66 E-value=4.9e-09 Score=101.44 Aligned_cols=89 Identities=30% Similarity=0.723 Sum_probs=38.3
Q ss_pred CCCCCCcCCCCccccCCccCC-CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCC
Q psy620 221 SCPEGTTGNGTRCHDIDECDL-AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRN 299 (1290)
Q Consensus 221 ~C~~Gy~Gdg~~C~dideC~~-~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~ 299 (1290)
....+|.+ ..| +++||.. ...|. ++|+++.++|+|. |++||+|.. ...|++|+||.. .
T Consensus 17 ~~~~~~~~--~~C-d~neC~~~~~~C~--~~C~n~~g~y~C~-C~~Gy~g~~-------------g~~C~dideC~~--~ 75 (107)
T 2w2n_E 17 TTENLYFQ--GAM-GTNECLDNNGGCS--YVCNDLKIGYECL-CPDGFQLVA-------------QRRCEDIDECQD--P 75 (107)
T ss_dssp ---CCCCS--CCB-SCCGGGTGGGGCS--SEEECCSBSCEEE-CCTTCEEET-------------TTEEEC---------
T ss_pred ccCCCcCC--CCC-cCccCcCCCCCCC--CEeEeCCCCeEEE-CCCCccccC-------------CCccccccccCC--C
Confidence 45578887 778 6899974 24675 6899999999999 999999842 356889999984 2
Q ss_pred CCCCCCCccccCCCCcEEcCcCcCCccccCCCCCC
Q psy620 300 GGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGC 334 (1290)
Q Consensus 300 g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C 334 (1290)
++|. ++|+++.++|+| .|++||++...++.|
T Consensus 76 ~~C~--~~C~n~~gsy~C--~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 76 DTCS--QLCVNLEGGYKC--QCEEGFQLDPHTKAC 106 (107)
T ss_dssp -----------------------------------
T ss_pred CCcC--CeeecCCCCEEE--ECCCCceECCCCCcc
Confidence 3596 799999999999 999999987766665
No 59
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.64 E-value=2.9e-08 Score=113.88 Aligned_cols=86 Identities=29% Similarity=0.724 Sum_probs=72.1
Q ss_pred cCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCC
Q psy620 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGS 314 (1290)
Q Consensus 235 dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gs 314 (1290)
++++|. .+||.++++|++..++|+|. |++||+|..|+ .+++||...++++|.+ +|+++.++
T Consensus 4 d~~~C~-~~pC~~~g~C~~~~~~~~C~-C~~g~~g~~C~---------------~~~~eC~~~~~~~C~~--~C~~~~g~ 64 (317)
T 3h5c_B 4 GGSPCI-SQPCLHNGSCQDSIWGYTCT-CSPGYEGSNCE---------------LAKNECHPERTDGCQH--FCLPGQES 64 (317)
T ss_dssp --CCTT-SCCCTTTCCCCCCSSSCCCC-CSSSCCSSSSC---------------CCSSSCCTTCTTSCSS--EEECCSSS
T ss_pred cCCcCC-CCCCCCCCEeECCCCCeEEE-CCCCCcCCccc---------------cCcccCCCCCCCCCcC--ccccCCCe
Confidence 578998 88999999999999999999 99999998854 3899998732356985 99999999
Q ss_pred cEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 315 FTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 315 y~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
|+| .|++||++......|.+ +++|.
T Consensus 65 ~~C--~C~~g~~~~~~~~~C~~----~~~c~ 89 (317)
T 3h5c_B 65 YTC--SCAQGYRLGEDHKQCVP----HDQCA 89 (317)
T ss_dssp CEE--ECCTTEECCTTSSCCEE----CSSCC
T ss_pred eEE--ecccccccccccccccc----ccccc
Confidence 999 99999998877888887 56664
No 60
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.44 E-value=2e-07 Score=119.51 Aligned_cols=125 Identities=28% Similarity=0.667 Sum_probs=79.8
Q ss_pred CCCCCCCCCC---CCCCCCCCeeccCCC--CcccccCCCCCCCCCCCceecccCCCCCCCCCCCCCCcce-eeeccCCCC
Q psy620 141 IHCKPGVTCN---MRPCFQGVQCFDTVE--GYTCGPCPSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRC-VRCDDIPEH 214 (1290)
Q Consensus 141 ~~CedideC~---~~pC~~gg~C~n~~g--~y~C~~C~~Gy~Gdg~~C~~ideC~~~pC~~g~~~~~~~C-g~C~~~~~~ 214 (1290)
..|..+.+|. ..+|.+ +.|++... ...+ .|+.|+.+....| ..++|..+ .+.| ..|+++.
T Consensus 265 ~~C~~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~-dC~dgsDe~~~~C------~~~~C~~~----~~~C~~~C~~~~-- 330 (791)
T 3m0c_C 265 VGCVNVTLCEGPNKFKCHS-GECITLDKVCNMAR-DCRDWSDEPIKEC------GTNECLDN----NGGCSHVCNDLK-- 330 (791)
T ss_dssp --------CCSTTCCCCTT-SCCCCSSCCSCSSC-CSSSSCSCCCTTB------SCCSTTTG----GGGCSSEEEECS--
T ss_pred CcccccccccCCCccccCC-CcccccccccCCcc-ccccccCcccccc------cccccccc----ccCccccccCCC--
Confidence 3444444553 235655 47775532 3455 6777765543334 34444432 0111 3688875
Q ss_pred CceecCCCCCCCcC-CCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCC
Q psy620 215 PYYRCGSCPEGTTG-NGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDE 293 (1290)
Q Consensus 215 g~y~C~~C~~Gy~G-dg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dide 293 (1290)
++|+| .|++||.+ ++..|++++||....+|. ++|+++.++|+|. |++||.+.. ..+.|..+++
T Consensus 331 ~~y~C-~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~-C~~Gy~l~~------------~~~~C~~~~~ 394 (791)
T 3m0c_C 331 IGYEC-LCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ-CEEGFQLDP------------HTKACKAVGS 394 (791)
T ss_dssp BSEEE-ECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCBCCC-CCSSEECCS------------SCCCCEETTS
T ss_pred CCccc-CCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCceee-cCCCCEeCC------------CCceeeeccc
Confidence 68999 99999974 458999999997556775 6899999999999 999999865 4566777665
Q ss_pred CC
Q psy620 294 CA 295 (1290)
Q Consensus 294 C~ 295 (1290)
+.
T Consensus 395 ~p 396 (791)
T 3m0c_C 395 IA 396 (791)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 61
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.23 E-value=6.7e-07 Score=105.94 Aligned_cols=75 Identities=31% Similarity=0.676 Sum_probs=63.0
Q ss_pred CCCCCCCCCCCCCeeecCCCCcccccCCCCccc-CCCCCCCCCCCCC-CCCCCCCeeccCCCCcccccCCCCCCCC--CC
Q psy620 106 PTCATDNPCFPGVECRDTREGPRCMRCPDGYVG-DGIHCKPGVTCNM-RPCFQGVQCFDTVEGYTCGPCPSGYTGD--GE 181 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~G-dg~~CedideC~~-~pC~~gg~C~n~~g~y~C~~C~~Gy~Gd--g~ 181 (1290)
+||. .+||..++.|+++.++|+| .|++||++ ++..|++++||.. .+|.+ +|+++.++|+| .|++||++. ++
T Consensus 1 ~eC~-~~~~~c~~~C~~~~~~y~C-~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C-~C~~g~~~~~~~~ 75 (400)
T 3p5b_L 1 NECL-DNNGGCSHVCNDLKIGYEC-LCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKC-QCEEGFQLDPHTK 75 (400)
T ss_dssp CCTT-TTGGGCSSEEEECSSSEEE-ECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBC-CCCTTCCCCTTTS
T ss_pred Cccc-CCCCCCCCEeECCCCCeEE-ECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceee-ecccccccccccc
Confidence 5788 7777777899999999999 99999994 3489999999984 67865 89999999999 999999965 34
Q ss_pred Ccee
Q psy620 182 RCQR 185 (1290)
Q Consensus 182 ~C~~ 185 (1290)
.|..
T Consensus 76 ~C~~ 79 (400)
T 3p5b_L 76 ACKA 79 (400)
T ss_dssp SCCC
T ss_pred ceee
Confidence 5543
No 62
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.21 E-value=7e-07 Score=105.77 Aligned_cols=79 Identities=33% Similarity=0.810 Sum_probs=65.0
Q ss_pred CccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcE
Q psy620 237 DECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFT 316 (1290)
Q Consensus 237 deC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~ 316 (1290)
+||. ..+|...+.|+++.++|+|. |++||++. .+..|++++||.. .+.|.+ +|+|+.|+|+
T Consensus 1 ~eC~-~~~~~c~~~C~~~~~~y~C~-C~~G~~~~-------------~~~~C~dideC~~--~~~C~~--~C~n~~g~~~ 61 (400)
T 3p5b_L 1 NECL-DNNGGCSHVCNDLKIGYECL-CPDGFQLV-------------AQRRCEDIDECQD--PDTCSQ--LCVNLEGGYK 61 (400)
T ss_dssp CCTT-TTGGGCSSEEEECSSSEEEE-CCTTEEEC-------------SSSCEEECCCCST--TSSCSS--CCBCCSSSCB
T ss_pred Cccc-CCCCCCCCEeECCCCCeEEE-CCCCCCcC-------------CCCcccCchhhhc--cCCCCC--ccCCCcccee
Confidence 4786 55666668999999999999 99999963 2456899999984 346974 8999999999
Q ss_pred EcCcCcCCccccCCCCCCCC
Q psy620 317 CTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 317 C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
| .|++||.+...++.|..
T Consensus 62 C--~C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 62 C--QCEEGFQLDPHTKACKA 79 (400)
T ss_dssp C--CCCTTCCCCTTTSSCCC
T ss_pred e--eccccccccccccceee
Confidence 9 99999998777777765
No 63
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=3.5e-07 Score=107.71 Aligned_cols=82 Identities=29% Similarity=0.734 Sum_probs=22.7
Q ss_pred cCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCC
Q psy620 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGS 314 (1290)
Q Consensus 235 dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gs 314 (1290)
+++||. .+++...+.|.+..++|+|. |++||++.. ++..|++++||.. .+.|.+ .|+++.|+
T Consensus 2 ~~~~C~-~~~~~c~~~C~~~~g~~~C~-C~~G~~l~~------------~~~~C~d~~eC~~--~~~C~~--~C~~~~g~ 63 (386)
T 3v65_B 2 GEENCN-VNNGGCAQKCQMIRGAVQCT-CHTGYRLTE------------DGRTCQDVNECAE--EGYCSQ--GCTNSEGA 63 (386)
T ss_dssp ------------------------------------------------------------------CCTT--EEC-----
T ss_pred CcCccc-CCCCCCCCCCcCCCCCcEeE-CCCCceECC------------CCCccCccceeCC--cCcccC--cCCCCCCC
Confidence 578997 55543346899999999999 999998554 4567999999973 356984 49999999
Q ss_pred cEEcCcCcCCccccCCCCCCCC
Q psy620 315 FTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 315 y~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
|+| .|++||++...++.|+.
T Consensus 64 ~~C--~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 64 FQC--WCEAGYELRPDRRSCKA 83 (386)
T ss_dssp CCE--ECCTTEEECTTSSCEEE
T ss_pred CeE--EECCCceEcCCCCeECC
Confidence 999 99999998777777875
No 64
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.13 E-value=4.9e-07 Score=106.53 Aligned_cols=79 Identities=27% Similarity=0.740 Sum_probs=19.4
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecC
Q psy620 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCD 369 (1290)
Q Consensus 290 dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~ 369 (1290)
+++||... ++.|. ++|.+..|+|+| .|++||++...++.|++ +++|....+|.+ .|+++ .++|+|.|+
T Consensus 2 ~~~~C~~~-~~~c~--~~C~~~~g~~~C--~C~~G~~l~~~~~~C~d----~~eC~~~~~C~~--~C~~~-~g~~~C~C~ 69 (386)
T 3v65_B 2 GEENCNVN-NGGCA--QKCQMIRGAVQC--TCHTGYRLTEDGRTCQD----VNECAEEGYCSQ--GCTNS-EGAFQCWCE 69 (386)
T ss_dssp -----------------------------------------------------------CCTT--EEC------CCEECC
T ss_pred CcCcccCC-CCCCC--CCCcCCCCCcEe--ECCCCceECCCCCccCc----cceeCCcCcccC--cCCCC-CCCCeEEEC
Confidence 67899887 55676 589999999999 99999998777889987 899975589986 49998 889999999
Q ss_pred CCccc--CCCCcC
Q psy620 370 NGWAG--DGQFCG 380 (1290)
Q Consensus 370 ~Gy~G--dG~~Ce 380 (1290)
+||+. +++.|+
T Consensus 70 ~g~~l~~d~~~C~ 82 (386)
T 3v65_B 70 AGYELRPDRRSCK 82 (386)
T ss_dssp TTEEECTTSSCEE
T ss_pred CCceEcCCCCeEC
Confidence 99983 456774
No 65
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.12 E-value=1.6e-06 Score=90.07 Aligned_cols=30 Identities=33% Similarity=0.839 Sum_probs=24.9
Q ss_pred CCCCCCeeecCC--CCcccccCCCCcccCCCCCC
Q psy620 113 PCFPGVECRDTR--EGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 113 pC~~gg~C~~~~--g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
||.++++|.... +.++|..|++||+| ..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G--~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAG--KRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEES--TTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcC--CCCc
Confidence 799999998765 56899559999999 6777
No 66
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.94 E-value=2.7e-06 Score=71.95 Aligned_cols=42 Identities=31% Similarity=0.713 Sum_probs=35.8
Q ss_pred CCCC-CCCCCCCCCCCCCCee-----ccCCCCcccccCCCCCCCCCCCcee
Q psy620 141 IHCK-PGVTCNMRPCFQGVQC-----FDTVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 141 ~~Ce-dideC~~~pC~~gg~C-----~n~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
..|+ +++||+++||.++|+| ++..++|+| .|++||+|. +|+.
T Consensus 2 ~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C-~C~~g~~G~--~CE~ 49 (55)
T 3u7u_G 2 TSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLC-KCPNEFTGD--RCQN 49 (55)
T ss_dssp -CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEE-EECTTEEST--TSCE
T ss_pred CCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeE-eCCCCCcCC--CcCc
Confidence 5677 7899999999999999 567789999 999999999 8886
No 67
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.73 E-value=1.3e-05 Score=62.82 Aligned_cols=37 Identities=38% Similarity=1.076 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCce
Q psy620 145 PGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184 (1290)
Q Consensus 145 dideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~ 184 (1290)
++++|..+||.++++|++..++|+| .|++||+|. .|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C-~C~~G~~G~--~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYEC-WCPFGFEGK--NCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEE-ECCTTCCST--TSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEe-ECCCCCcCC--ccC
Confidence 5789999999999999999999999 999999987 775
No 68
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.71 E-value=1.5e-05 Score=62.31 Aligned_cols=37 Identities=35% Similarity=0.954 Sum_probs=33.8
Q ss_pred cCCCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCC
Q psy620 104 KKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 104 ~~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
++++|. ++||+++++|++..++|+| .|++||+| ..|+
T Consensus 2 d~d~C~-~~pC~ngg~C~~~~~~~~C-~C~~G~~G--~~Ce 38 (39)
T 1edm_B 2 DGDQCE-SNPCLNGGSCKDDINSYEC-WCPFGFEG--KNCE 38 (39)
T ss_dssp CCCTTT-TCCCCTTCEEEEETTEEEE-ECCTTCCS--TTSC
T ss_pred ccccCC-CCCCCCCCEeEcCCCceEe-ECCCCCcC--CccC
Confidence 568998 8999999999999999999 99999999 6775
No 69
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.63 E-value=2.2e-05 Score=66.36 Aligned_cols=39 Identities=28% Similarity=0.669 Sum_probs=33.2
Q ss_pred cccCCCCCCCCCCCCCCee-----ecCCCCcccccCCCCcccCCCCCC
Q psy620 102 IVKKPTCATDNPCFPGVEC-----RDTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 102 ~~~~d~C~~~~pC~~gg~C-----~~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
.+.+++|. ++||+|+|+| ++..++|+| .|++||+| .+||
T Consensus 5 ~~~~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C-~C~~g~~G--~~CE 48 (55)
T 3u7u_G 5 LVKCAEKE-KTFCVNGGECFMVKDLSNPSRYLC-KCPNEFTG--DRCQ 48 (55)
T ss_dssp EEECCSTT-TTTSCTTCEEEEECCC--CCCEEE-EECTTEES--TTSC
T ss_pred cccCCCCc-CCCCCCCCCcCCCCccCCCCCEeE-eCCCCCcC--CCcC
Confidence 34679999 9999999999 456789999 99999999 7898
No 70
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.61 E-value=3.6e-05 Score=79.77 Aligned_cols=119 Identities=22% Similarity=0.544 Sum_probs=63.9
Q ss_pred CCCCCcccccCC--CCeec-ccCCCCCccCCCCccccccccccC-----CCCccc-----------CCCCCCCCCCCCCC
Q psy620 244 PCDPRVQCTNLF--PGYRC-DPCPAGFTGSTGVQGVGLEHAVRF-----RQTCVD-----------IDECADGRNGGCDS 304 (1290)
Q Consensus 244 pC~~~g~C~n~~--gsy~C-~~C~~Gy~G~~Ce~~~~~~~~~~~-----~~~C~d-----------ideC~~~~~g~C~~ 304 (1290)
+|.++++|.... +.++| . |+++|+|..||.....-+.... ...|+. ...|... ++.|.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~-C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~-tG~C~- 78 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTH-CPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRL-TGECL- 78 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECS-CCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTT-TCCBC-
T ss_pred cCcCcCcccccCCCCCEEeCC-CCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCC-CCccc-
Confidence 688889998765 57899 6 9999999999864322111110 011210 0122221 22221
Q ss_pred CCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC------eEeeecCCceEEecCCCcccCCCC
Q psy620 305 NSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNA------KCTRILGNHYACKCDNGWAGDGQF 378 (1290)
Q Consensus 305 ~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g------~C~~~~~gsy~C~C~~Gy~GdG~~ 378 (1290)
.|.....+.+|+ +|++||++.... .. ....|. .-.|.+.+ +|... ..+|.|++||+| .+
T Consensus 79 --~C~~g~~G~~Ce-~C~~Gy~g~~~~----~~--~~~~C~-~C~C~~~Gs~~~~~~Cd~~---tG~C~C~~g~~G--~~ 143 (162)
T 1klo_A 79 --KCIYNTAGFYCD-RCKEGFFGNPLA----PN--PADKCK-ACACNPYGTVQQQSSCNPV---TGQCQCLPHVSG--RD 143 (162)
T ss_dssp --CBCTTEETTTTC-EECTTEEECTTC----SS--GGGSEE-ECCCCTTTBGGGCCCCCTT---TCCCCBCTTEES--TT
T ss_pred --CCCCCCcCCCcC-cCchhhcCCccc----cC--CCCCCe-eccCCCCCccCCCCCCCCC---CCEeECCCCCcC--CC
Confidence 133444445564 566666653321 00 011222 12355543 67543 359999999999 88
Q ss_pred cC
Q psy620 379 CG 380 (1290)
Q Consensus 379 Ce 380 (1290)
|+
T Consensus 144 Cd 145 (162)
T 1klo_A 144 CG 145 (162)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 71
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.59 E-value=2.6e-05 Score=84.55 Aligned_cols=113 Identities=19% Similarity=0.371 Sum_probs=70.9
Q ss_pred CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcC
Q psy620 242 AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLC 321 (1290)
Q Consensus 242 ~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C 321 (1290)
+..|.++++|+. ..|. |.+||+|..|+..............|... +. ...|.++|+|+. .+| .|
T Consensus 95 ~~~Csg~G~C~~----g~C~-C~~G~~G~~Cec~~~~~~~~~~~~~C~~~--~~---~~~Csg~G~C~~----g~C--~C 158 (217)
T 2p28_B 95 RSLCHGKGFLEC----GICR-CDTGYIGKNCECQTQGRSSQELEGSCRKD--NN---SIICSGLGDCVC----GQC--LC 158 (217)
T ss_dssp -CTTTTSEEEET----TEEE-ECTTEESTTSCEECCCCC-GGGGGGGBSS--TT---SCBGGGTEEEET----TEE--EE
T ss_pred CCccCCCceEEC----CEEE-CCCCccCCcccccCcccccccCCCcCCCC--CC---CCCCCCCCEEeC----Cce--EC
Confidence 456888899985 3799 99999999998322110000001223211 11 234888899985 379 99
Q ss_pred cCCcccc--CCCCCCCCCCCCCCCCCCC--CCCCCC--CeEeeecCCceEEecCCCcccCCCCcC
Q psy620 322 RNSYMVR--NVSVGCQSQNFGADVCPDG--TRCDRN--AKCTRILGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 322 ~~Gy~g~--~~g~~C~~~~~~id~C~~~--~~C~~~--g~C~~~~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
.+||.+. ..+..|+.. +..|... .+|..+ |+|.. .+|.|.+||+| ..|+
T Consensus 159 ~~gw~~~~~~~G~~Ce~~---~~~C~~~~g~~C~~~~~G~C~~-----g~C~C~~G~~G--~~C~ 213 (217)
T 2p28_B 159 HTSDVPGKLIYGQYCECD---TINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEG--SACQ 213 (217)
T ss_dssp CCCCSTTCCEESTTSCEE---SSCSCEETTEETTCTTTEEEET-----TEEEECTTEES--TTSC
T ss_pred CCCCCCcccEECCCcccC---CccCCCCCCCCCCCCCCcEEeC-----CeeECCCCCcc--CCcC
Confidence 9994110 014567632 3567632 369887 99985 29999999999 7886
No 72
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.57 E-value=1.8e-05 Score=85.79 Aligned_cols=108 Identities=25% Similarity=0.537 Sum_probs=70.1
Q ss_pred CCCCCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCC
Q psy620 111 DNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCS 190 (1290)
Q Consensus 111 ~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~ 190 (1290)
+..|.++|+|.. ..| .|++||+| ..|+ |...... ..+. ...| .. .+.
T Consensus 95 ~~~Csg~G~C~~----g~C-~C~~G~~G--~~Ce----c~~~~~~--~~~~----~~~C--------------~~--~~~ 141 (217)
T 2p28_B 95 RSLCHGKGFLEC----GIC-RCDTGYIG--KNCE----CQTQGRS--SQEL----EGSC--------------RK--DNN 141 (217)
T ss_dssp -CTTTTSEEEET----TEE-EECTTEES--TTSC----EECCCCC---GGG----GGGG--------------BS--STT
T ss_pred CCccCCCceEEC----CEE-ECCCCccC--Cccc----ccCcccc--cccC----CCcC--------------CC--CCC
Confidence 567888888873 888 88888888 5665 2211110 0000 1122 11 123
Q ss_pred CCCCCCCCCCCCcceeeeccCCCCCceecCCCCCC------CcCCCCccc-cCCccCC--CCCCCCC--cccccCCCCee
Q psy620 191 RNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEG------TTGNGTRCH-DIDECDL--AEPCDPR--VQCTNLFPGYR 259 (1290)
Q Consensus 191 ~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~G------y~Gdg~~C~-dideC~~--~~pC~~~--g~C~n~~gsy~ 259 (1290)
..+|.++ ++|+. .+| .|.+| |+| ..|+ ++.+|.. ..+|..+ ++|.. .+
T Consensus 142 ~~~Csg~--------G~C~~------g~C-~C~~gw~~~~~~~G--~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~ 200 (217)
T 2p28_B 142 SIICSGL--------GDCVC------GQC-LCHTSDVPGKLIYG--QYCECDTINCERYNGQVCGGPGRGLCFC----GK 200 (217)
T ss_dssp SCBGGGT--------EEEET------TEE-EECCCCSTTCCEES--TTSCEESSCSCEETTEETTCTTTEEEET----TE
T ss_pred CCCCCCC--------CEEeC------Cce-ECCCCCCCcccEEC--CCcccCCccCCCCCCCCCCCCCCcEEeC----Ce
Confidence 4578887 89984 279 99999 577 8897 4677862 1269887 99985 28
Q ss_pred cccCCCCCccCCCC
Q psy620 260 CDPCPAGFTGSTGV 273 (1290)
Q Consensus 260 C~~C~~Gy~G~~Ce 273 (1290)
|. |.+||+|..|+
T Consensus 201 C~-C~~G~~G~~C~ 213 (217)
T 2p28_B 201 CR-CHPGFEGSACQ 213 (217)
T ss_dssp EE-ECTTEESTTSC
T ss_pred eE-CCCCCccCCcC
Confidence 99 99999999976
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.54 E-value=7.2e-06 Score=70.87 Aligned_cols=45 Identities=27% Similarity=0.576 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCCCCCC--CeeccCCCCcccccCCCCCC-CCCCCceecccC
Q psy620 142 HCKPGVTCNMRPCFQG--VQCFDTVEGYTCGPCPSGYT-GDGERCQRIGGC 189 (1290)
Q Consensus 142 ~CedideC~~~pC~~g--g~C~n~~g~y~C~~C~~Gy~-Gdg~~C~~ideC 189 (1290)
.|+.+++|+++||.++ ++|+++.++|+| .|++||+ |. .|+...+|
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C-~C~~Gy~~G~--~C~~~~~C 54 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCKETNSGYIC-RCNQGYRISL--DGTGNVTC 54 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEEECSSEEEE-ECCTTEEEEE--CSSSCEEE
T ss_pred hcCCCCcCcCCCCcCCCccccccCCCceEe-ECCCCCccCC--CCCCCCEe
Confidence 5778899999999998 899999999999 9999999 87 77655444
No 74
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.45 E-value=5.5e-05 Score=61.22 Aligned_cols=33 Identities=24% Similarity=0.604 Sum_probs=28.1
Q ss_pred CCCCCCceec--cCCCCCccccCCCCccCCCcccc-CCC
Q psy620 594 NPCFPGVECR--DTREGPRCMRCPDGYVGDGIHCK-PGV 629 (1290)
Q Consensus 594 nPC~~g~~C~--~~~~g~~Cg~Cp~G~~Gdg~~C~-did 629 (1290)
+||+||++|+ +..++|+| .|++||+| .+|+ +++
T Consensus 9 ~pC~ngg~C~~~~~~~~~~C-~C~~G~~G--~~Ce~~~~ 44 (45)
T 1a3p_A 9 GYCLNGGVXMHIESLDSYTC-NCVIGYSG--DRCQTRDL 44 (45)
T ss_dssp SCCSSSCEEEECTTTSSEEE-ECCTTEET--TTTCEECC
T ss_pred CCCCCCCEEEeecCCCCEEE-EcCCCCcC--CcCCcccC
Confidence 3999999998 67789999 89999998 6787 444
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.44 E-value=1.6e-05 Score=68.71 Aligned_cols=44 Identities=36% Similarity=0.825 Sum_probs=38.2
Q ss_pred ccCCCCCCCCCCCCC--CeeecCCCCcccccCCCCcc-cCCCCCCCCCCCC
Q psy620 103 VKKPTCATDNPCFPG--VECRDTREGPRCMRCPDGYV-GDGIHCKPGVTCN 150 (1290)
Q Consensus 103 ~~~d~C~~~~pC~~g--g~C~~~~g~y~C~~C~~Gy~-Gdg~~CedideC~ 150 (1290)
..+++|. ++||+++ ++|++..++|.| .|++||+ | ..|+...+|.
T Consensus 9 ~~~d~C~-snPC~nga~gtC~~~~g~y~C-~C~~Gy~~G--~~C~~~~~C~ 55 (61)
T 2k2s_B 9 ETPAACS-SNPCGPEAAGTCKETNSGYIC-RCNQGYRIS--LDGTGNVTCI 55 (61)
T ss_dssp TSCCHHH-HCSSCSSSCCEEEECSSEEEE-ECCTTEEEE--ECSSSCEEEE
T ss_pred CCCCcCc-CCCCcCCCccccccCCCceEe-ECCCCCccC--CCCCCCCEec
Confidence 3568898 8999999 899999999999 9999999 9 7888666664
No 76
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.38 E-value=3.2e-05 Score=67.28 Aligned_cols=43 Identities=21% Similarity=0.410 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCceecc-----CCCCCccccCCCCccCCCcccc-CCCCcCCCC
Q psy620 589 TCATDNPCFPGVECRD-----TREGPRCMRCPDGYVGDGIHCK-PGVTCNMRP 635 (1290)
Q Consensus 589 ~C~~~nPC~~g~~C~~-----~~~g~~Cg~Cp~G~~Gdg~~C~-dideC~~~p 635 (1290)
.|. ++||+||++|++ ..++|+| .|++||+| .+|+ +|++|...+
T Consensus 8 ~C~-~~pC~ngG~C~~~~~~~~~~~y~C-~C~~Gf~G--~~Ce~~i~~~~~~~ 56 (63)
T 1hae_A 8 EKE-KTFCVNGGECFMVKDLSNPSRYLC-KCQPGFTG--ARCTENVPMKVQNQ 56 (63)
T ss_dssp HHH-HTTSCTTCEEEEEESSSSSCCEEE-ECCTTEES--TTSCEECCSSCTTC
T ss_pred CCC-CCcCCCCcEEecCCccCCCCCEEE-ECCCCCcC--CccCcCcCcccccc
Confidence 454 799999999996 6679999 89999998 7897 889887643
No 77
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.35 E-value=0.00011 Score=59.40 Aligned_cols=35 Identities=26% Similarity=0.632 Sum_probs=29.9
Q ss_pred CCCCCCC---CCCCCCeee--cCCCCcccccCCCCcccCCCCCC
Q psy620 106 PTCATDN---PCFPGVECR--DTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 106 d~C~~~~---pC~~gg~C~--~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
++|. ++ ||+++|+|+ +..++|+| .|++||+| ..|+
T Consensus 1 ~~C~-~~~~~pC~ngg~C~~~~~~~~~~C-~C~~G~~G--~~Ce 40 (45)
T 1a3p_A 1 PGXP-SSYDGYCLNGGVXMHIESLDSYTC-NCVIGYSG--DRCQ 40 (45)
T ss_dssp CCCT-TCCSSCCSSSCEEEECTTTSSEEE-ECCTTEET--TTTC
T ss_pred CCcc-cCCCCCCCCCCEEEeecCCCCEEE-EcCCCCcC--CcCC
Confidence 3576 55 999999998 67789999 99999999 7887
No 78
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.32 E-value=3e-05 Score=93.56 Aligned_cols=79 Identities=25% Similarity=0.603 Sum_probs=39.7
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCCCCCCCCCCCCCCccee
Q psy620 127 PRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRCV 206 (1290)
Q Consensus 127 y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~~~pC~~g~~~~~~~Cg 206 (1290)
..+ .|..+|.| ..|+ +++|.. +|.+ ++|++. ++| .|++||+|. .|+ ++.|.. +|.++ +
T Consensus 377 ~p~-~C~~~~~g--~~c~-~~~C~~-~C~n-G~C~~~---~~C-~C~~G~~G~--~C~-~~~C~~-~C~~~--------g 434 (463)
T 2wg3_C 377 MPE-ECRATVQP--AQTL-TSECSR-LCRN-GYCTPT---GKC-CCSPGWEGD--FCR-TAKCEP-ACRHG--------G 434 (463)
T ss_dssp SCG-GGCCCCCC--CCCC-CCHHHH-HCCS-EEECTT---SCE-EECTTEEST--TSC-EECC-----------------
T ss_pred ccc-cCCCCCcC--CCCc-cccccC-CCCC-CccCCC---CeE-CCCCCcCCC--cCC-cCcCCC-CCCCC--------C
Confidence 346 88999998 5787 467875 6987 799864 489 999999998 996 567987 99999 8
Q ss_pred eeccCCCCCceecCCCCCCCcCCCCcccc
Q psy620 207 RCDDIPEHPYYRCGSCPEGTTGNGTRCHD 235 (1290)
Q Consensus 207 ~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~d 235 (1290)
+|+.. ++| .|++||+| ..|+.
T Consensus 435 ~C~~~-----~~C-~C~~G~~G--~~C~~ 455 (463)
T 2wg3_C 435 VCVRP-----NKC-LCKKGYLG--PQCEQ 455 (463)
T ss_dssp -----------------------------
T ss_pred EECCC-----CEE-ECCCCccc--CCCCC
Confidence 99853 589 99999999 78863
No 79
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.32 E-value=0.00017 Score=60.55 Aligned_cols=37 Identities=30% Similarity=0.790 Sum_probs=32.6
Q ss_pred cCCCCCCCC---CCCCCCeee--cCCCCcccccCCCCcccCCCCCC
Q psy620 104 KKPTCATDN---PCFPGVECR--DTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 104 ~~d~C~~~~---pC~~gg~C~--~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
++++|. ++ ||+++|+|+ +..++|.| .|++||+| ..|+
T Consensus 2 ~i~~C~-~~~~~pC~ngg~C~~~~~~~~~~C-~C~~G~~G--~~Ce 43 (53)
T 1egf_A 2 SYPGCP-SSYDGYCLNGGVCMHIESLDSYTC-NCVIGYSG--DRCQ 43 (53)
T ss_dssp EECCCC-TTSSCSSCSSCEEEEESSSSCEEE-ECCTTCCS--SSSC
T ss_pred CcccCC-CCCCCcCCCCcEEEeeCCCCCEEE-ECCCCCcC--CcCC
Confidence 357898 54 999999999 78899999 99999999 7898
No 80
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.24 E-value=0.00016 Score=60.58 Aligned_cols=38 Identities=39% Similarity=0.984 Sum_probs=34.0
Q ss_pred CCCCCCCC---CCCCCCeec--cCCCCcccccCCCCCCCCCCCcee
Q psy620 145 PGVTCNMR---PCFQGVQCF--DTVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 145 dideC~~~---pC~~gg~C~--n~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
++++|.++ ||.++++|+ +..++|+| .|++||+|. +|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C-~C~~G~~G~--~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTC-NCVIGYSGD--RCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEE-ECCTTCCSS--SSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEE-ECCCCCcCC--cCCc
Confidence 46789886 999999999 88899999 999999998 8875
No 81
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.21 E-value=4.9e-05 Score=91.69 Aligned_cols=78 Identities=26% Similarity=0.635 Sum_probs=35.4
Q ss_pred ecccCCCCCccCCCCccccccccccCCCCcccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCC
Q psy620 259 RCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQN 338 (1290)
Q Consensus 259 ~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~ 338 (1290)
.+. |.++|.|..|+ +++|... |.+ ++|++. ++| .|++||+| ..|+
T Consensus 378 p~~-C~~~~~g~~c~-----------------~~~C~~~----C~n-G~C~~~---~~C--~C~~G~~G----~~C~--- 422 (463)
T 2wg3_C 378 PEE-CRATVQPAQTL-----------------TSECSRL----CRN-GYCTPT---GKC--CCSPGWEG----DFCR--- 422 (463)
T ss_dssp CGG-GCCCCCCCCCC-----------------CCHHHHH----CCS-EEECTT---SCE--EECTTEES----TTSC---
T ss_pred ccc-CCCCCcCCCCc-----------------cccccCC----CCC-CccCCC---CeE--CCCCCcCC----CcCC---
Confidence 466 88899988754 3567642 885 799864 479 99999985 4565
Q ss_pred CCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCC
Q psy620 339 FGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 339 ~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
+++|.. +|.++|+|+.. ++|.|++||+| ..|+.
T Consensus 423 --~~~C~~--~C~~~g~C~~~----~~C~C~~G~~G--~~C~~ 455 (463)
T 2wg3_C 423 --TAKCEP--ACRHGGVCVRP----NKCLCKKGYLG--PQCEQ 455 (463)
T ss_dssp --EECC-------------------------------------
T ss_pred --cCcCCC--CCCCCCEECCC----CEEECCCCccc--CCCCC
Confidence 367873 89999999865 69999999999 88973
No 82
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.14 E-value=0.00011 Score=63.98 Aligned_cols=42 Identities=21% Similarity=0.421 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCeeec-----CCCCcccccCCCCcccCCCCCC-CCCCCCC
Q psy620 106 PTCATDNPCFPGVECRD-----TREGPRCMRCPDGYVGDGIHCK-PGVTCNM 151 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~-----~~g~y~C~~C~~Gy~Gdg~~Ce-dideC~~ 151 (1290)
++|. ++||+|+|+|++ ..++|+| .|++||+| ..|+ ++++|..
T Consensus 7 ~~C~-~~pC~ngG~C~~~~~~~~~~~y~C-~C~~Gf~G--~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKE-KTFCVNGGECFMVKDLSNPSRYLC-KCQPGFTG--ARCTENVPMKVQ 54 (63)
T ss_dssp CHHH-HTTSCTTCEEEEEESSSSSCCEEE-ECCTTEES--TTSCEECCSSCT
T ss_pred CCCC-CCcCCCCcEEecCCccCCCCCEEE-ECCCCCcC--CccCcCcCcccc
Confidence 6777 899999999996 6688999 99999999 7998 6777654
No 83
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.01 E-value=5.6e-05 Score=63.19 Aligned_cols=42 Identities=31% Similarity=0.982 Sum_probs=34.5
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCCCCCCCeecc----CCCCcccccCCCCCCCCCCCcee
Q psy620 127 PRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFD----TVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 127 y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n----~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
++| .|++||+ .+||.++++|++ ..++|+| .|++||+|. +|+.
T Consensus 3 ~~C-~C~~g~~-------------~~pC~NGGtC~~~~~~~~~~y~C-~C~~Gf~G~--~Ce~ 48 (52)
T 3ca7_A 3 PTY-KCPETFD-------------AWYCLNDAHCFAVKIADLPVYSC-ECAIGFMGQ--RCEY 48 (52)
T ss_dssp CCB-CCCHHHH-------------HHTSCTTCEEEEEEETTEEEEEE-ECCTTEEST--TSCE
T ss_pred eee-ECCCCCc-------------CCcCCCCCEEecCccCCCCCEEE-ECCCCCcCC--CCcc
Confidence 468 8999987 358899999986 4568999 999999998 8875
No 84
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.00 E-value=0.00029 Score=83.01 Aligned_cols=97 Identities=25% Similarity=0.464 Sum_probs=32.2
Q ss_pred CCCC-CeeccCCCCcccccCCCCCCCCCCCcee-cccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCC
Q psy620 154 CFQG-VQCFDTVEGYTCGPCPSGYTGDGERCQR-IGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGT 231 (1290)
Q Consensus 154 C~~g-g~C~n~~g~y~C~~C~~Gy~Gdg~~C~~-ideC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~ 231 (1290)
|..+ ..|....++++| .|+.+++|. .|+. .......|+.++ ..|- ......+.|..|.-++.| .
T Consensus 299 CnGHas~C~~~~g~~~C-~C~~~ttG~--~CE~C~pgy~~~P~~~g--------t~~p-~~~g~~~~C~pC~Cn~~g--~ 364 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTC-ECEHNTTGP--DCGKCKKNYQGRPWSPG--------SYLP-IPKGAANACIPSISSIGT--N 364 (426)
T ss_dssp CSSSCSCEEEETTEEEE-CCCTTEESS--SSCEECTTCCSSCCCCC--------BCCS-SSSCBCCCCCCCCC-------
T ss_pred CCCchhhcCCCCCCcee-eCCCCCcCC--CccccccccccCcccCC--------cccc-cCCCCCCcccCCCCCCCc--C
Confidence 4433 468776677888 788888888 7775 222223456554 2221 111124556345544555 5
Q ss_pred ccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCC
Q psy620 232 RCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGV 273 (1290)
Q Consensus 232 ~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce 273 (1290)
.|... ..+|.++++|++.. +|. |++||+|..|+
T Consensus 365 ~CD~~-----t~~C~ngg~C~~~~---~C~-C~~G~~G~~Ce 397 (426)
T 3zyj_B 365 VCDNE-----LLHCQNGGTCHNNV---RCL-CPAAYTGILCE 397 (426)
T ss_dssp ------------------------------------------
T ss_pred ccccC-----cccCCCCCCcCCCC---CCc-CCCCCcCCCCc
Confidence 66421 35899999998766 897 99999998865
No 85
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.87 E-value=0.00032 Score=62.15 Aligned_cols=48 Identities=29% Similarity=0.706 Sum_probs=42.6
Q ss_pred ccCCCCCCCCCCCCCCCCccccCCC-CcEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 289 VDIDECADGRNGGCDSNSMCTNTEG-SFTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 289 ~dideC~~~~~g~C~~~g~C~n~~g-sy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
++++||... ++.|. ..|+++.| +|+| .|++||.+...+++|.+ +++|.
T Consensus 3 ~d~~eC~~~-nggC~--h~C~n~~g~s~~C--~C~~Gy~L~~D~~tC~d----~dec~ 51 (69)
T 1kli_L 3 DDQLICVNE-NGGCE--QYCSDHTGTKRSC--RCHEGYSLLADGVSCTP----TVEYP 51 (69)
T ss_dssp SCCCCTTSG-GGGCS--SEEEEETTTEEEE--ECCTTEEECTTSSCEEE----CSSSC
T ss_pred cccccccCC-CCCcC--CEeEcCCCCCEEE--eCCCCCeECCCCCcccC----ccccc
Confidence 688999887 78897 58999999 8999 99999999989999998 78876
No 86
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.85 E-value=0.00029 Score=59.53 Aligned_cols=45 Identities=27% Similarity=0.710 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 292 DECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 292 deC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
+||... ++.|. +.|+|++|+|+| .|++||.+...+++|++ +++|.
T Consensus 2 dEC~~~-~~~C~--~~C~nt~Gsy~C--~C~~Gy~L~~d~~~C~d----idec~ 46 (55)
T 2jkh_L 2 KLCSLD-NGDCD--QFCHEEQNSVVC--SCARGYTLADNGKACIP----TGPYP 46 (55)
T ss_dssp CCTTTG-GGGCS--SEEEEETTEEEE--ECCTTEEECTTSSCEEE----SSSSC
T ss_pred ccccCC-CCCcC--cEeEcCCCCeEE--eCCCCCEECCCCCeecc----Ccccc
Confidence 678765 56796 589999999999 99999998888999998 78886
No 87
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.79 E-value=0.00033 Score=57.03 Aligned_cols=38 Identities=26% Similarity=0.725 Sum_probs=30.3
Q ss_pred cCCCCCC--CCCCCCCCeeecCC--CCcccccCCCCcccCCCCCCC
Q psy620 104 KKPTCAT--DNPCFPGVECRDTR--EGPRCMRCPDGYVGDGIHCKP 145 (1290)
Q Consensus 104 ~~d~C~~--~~pC~~gg~C~~~~--g~y~C~~C~~Gy~Gdg~~Ced 145 (1290)
.+++|.. ++||.| |+|+... ++|.| .|++||+| .+|+.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C-~C~~GytG--~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYC-RCEVGYTG--VRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEE-EECTTCSS--TTSCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEE-ECCCCCcc--CCCCc
Confidence 4578882 289999 7998644 67999 99999999 78873
No 88
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.72 E-value=0.00062 Score=80.23 Aligned_cols=109 Identities=24% Similarity=0.490 Sum_probs=37.5
Q ss_pred CCCCC-CeeecCCCCcccccCCCCcccCCCCCCCCCCCCC----CCCCCCCee-ccCCCCcccccCCCCCCCCCCCceec
Q psy620 113 PCFPG-VECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNM----RPCFQGVQC-FDTVEGYTCGPCPSGYTGDGERCQRI 186 (1290)
Q Consensus 113 pC~~g-g~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~----~pC~~gg~C-~n~~g~y~C~~C~~Gy~Gdg~~C~~i 186 (1290)
.|..+ ..|....+++.| .|+.+++| ..|+ .|.. .|+.++..| +.....+.|..|+-++.|. .|...
T Consensus 298 ~CnGHas~C~~~~g~~~C-~C~~~ttG--~~CE---~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~--~CD~~ 369 (426)
T 3zyj_B 298 KCNLHATVCVYDNSKLTC-ECEHNTTG--PDCG---KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN--VCDNE 369 (426)
T ss_dssp CCSSSCSCEEEETTEEEE-CCCTTEES--SSSC---EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------
T ss_pred cCCCchhhcCCCCCCcee-eCCCCCcC--CCcc---ccccccccCcccCCcccccCCCCCCcccCCCCCCCcC--ccccC
Confidence 36654 489887778999 89999999 7888 3543 467665432 2233456675566566565 67541
Q ss_pred ccCCCCCCCCCCCCCCcceeeeccCCCCCceecCCCCCCCcCCCCccccCCccCCCCCCCCCcccccCCC
Q psy620 187 GGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFP 256 (1290)
Q Consensus 187 deC~~~pC~~g~~~~~~~Cg~C~~~~~~g~y~C~~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~g 256 (1290)
..||.++ ++|.... +| .|++||+| ..|+ ...|.++++|....|
T Consensus 370 ----t~~C~ng--------g~C~~~~-----~C-~C~~G~~G--~~Ce-------~c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 370 ----LLHCQNG--------GTCHNNV-----RC-LCPAAYTG--ILCE-------KLRCEEAGSCGSDSG 412 (426)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ----cccCCCC--------CCcCCCC-----CC-cCCCCCcC--CCCc-------CCCCCCCCcccCCCC
Confidence 2589999 8998642 89 99999999 5664 346888888887766
No 89
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.69 E-value=0.00028 Score=58.87 Aligned_cols=32 Identities=31% Similarity=0.653 Sum_probs=26.5
Q ss_pred CCCCCCCeEeee---cCCceEEecCCCcccCCCCcCC
Q psy620 348 TRCDRNAKCTRI---LGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 348 ~~C~~~g~C~~~---~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
++|.|+|+|+.. ..++|+|.|++||+| .+||.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G--~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMG--QRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEES--TTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcC--CCCcc
Confidence 468899999863 246799999999999 89974
No 90
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.57 E-value=0.0005 Score=55.94 Aligned_cols=37 Identities=35% Similarity=0.760 Sum_probs=31.3
Q ss_pred CCCCCCC---CCCCCCCeeccCC--CCcccccCCCCCCCCCCCcee
Q psy620 145 PGVTCNM---RPCFQGVQCFDTV--EGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 145 dideC~~---~pC~~gg~C~n~~--g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
++++|.+ +||.+ |+|++.. ++|.| .|++||+|. +|+.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C-~C~~GytG~--~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYC-RCEVGYTGV--RCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEE-EECTTCSST--TSCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEE-ECCCCCccC--CCCc
Confidence 3578888 89999 7999754 68999 999999998 8874
No 91
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.55 E-value=0.0011 Score=55.14 Aligned_cols=44 Identities=36% Similarity=0.850 Sum_probs=35.1
Q ss_pred ccCCCCCCCC-------CCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 289 VDIDECADGR-------NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 289 ~dideC~~~~-------~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
++|+||.... .+.|. ++|+|+.|+|+| .|++||++...++.|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C--~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFC--SCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEE--ECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEE--ECCCCCeECCCCCccCC
Confidence 4789998631 24696 599999999999 99999998777777754
No 92
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.53 E-value=0.00026 Score=79.00 Aligned_cols=46 Identities=17% Similarity=0.343 Sum_probs=36.1
Q ss_pred ccchhhcccccCcCCCCCCccCCCCCCCCCccCCCCCCCCCCCCccCCCCC
Q psy620 670 RDVNALVDVRATRALKASVRCDDIPEHPYYRCGSCPEGTTGNGTRCHDIDE 720 (1290)
Q Consensus 670 ~di~eC~~~~~~~~C~~~~~C~~~~~~g~y~C~~C~~Gy~Gng~~C~~~~~ 720 (1290)
.||+||.. ..++|..++.| +|+.|+|+|. |++||.|||..|.++++
T Consensus 3 ~DiDEC~~--~~~~C~~~a~C--~Nt~Gsy~C~-C~~Gy~GnG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCAN--NRHQCSVHAEC--RDYATGFCCR-CVANYTGNGRQCVAEGS 48 (285)
T ss_dssp ----CHHH--HGGGSCTTEEE--EECSSCEEEE-ECTTEEECSSSEEETTC
T ss_pred ccchhccC--CCCCCCCCCEe--EcCCCCeEEE-cCCCCCCCCCcCCCCCC
Confidence 37899976 35789999999 7789999997 99999999999976444
No 93
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.45 E-value=0.0014 Score=58.30 Aligned_cols=45 Identities=20% Similarity=0.388 Sum_probs=35.1
Q ss_pred ccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCC
Q psy620 289 VDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335 (1290)
Q Consensus 289 ~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~ 335 (1290)
++|+||... .+.|.++++|+|+.|+|+|. .|..||.+...+..+.
T Consensus 1 ~DidEC~~~-~~~C~~~~~C~Nt~Gsy~C~-~~~~g~~~~~~~~~~~ 45 (71)
T 2kl7_A 1 SDVNECLTI-PEACKGEMKCINHYGGYLCL-PRSAAVINDLHGEGPP 45 (71)
T ss_dssp CCSCCTTCC-CCSCTTEEEEEETTCCEEEE-ETTSCCCSCCSCSSCC
T ss_pred CccccccCC-CCCCCCCCEeECCCCCeEec-ccCCcccccccCCccc
Confidence 378999876 56799889999999999994 4667897765555443
No 94
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.27 E-value=0.00065 Score=69.74 Aligned_cols=45 Identities=24% Similarity=0.476 Sum_probs=37.2
Q ss_pred cCCCCCCCCCCCCCCceeccCCCCCccccCCCCccCCCccccCCCCcCC
Q psy620 585 VKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNM 633 (1290)
Q Consensus 585 ~~~~~C~~~nPC~~g~~C~~~~~g~~Cg~Cp~G~~Gdg~~C~dideC~~ 633 (1290)
+.+..|. ++||.++++|++..++|+| .|++||+| .+|+.++||+.
T Consensus 117 Ce~~~c~-~~~C~~~g~C~~~~~~~~c-~C~~g~~G--~~Ce~~~~c~~ 161 (162)
T 1g1s_A 117 CYTASCQ-DMSCSKQGECLETIGNYTC-SCYPGFYG--PECEYVRDDDD 161 (162)
T ss_dssp EEECCCC-TTGGGGSEEEEECSSSEEE-EECTTEES--TTSCEECC---
T ss_pred EEeCCCc-CCCCCCCCEEecCCCCceE-eCCCCCcC--cccccCcccCC
Confidence 3445687 7999999999999999999 99999998 68998889974
No 95
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.11 E-value=0.0018 Score=53.72 Aligned_cols=39 Identities=33% Similarity=0.859 Sum_probs=33.8
Q ss_pred CCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 299 NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 299 ~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
++.|. +.|+|+.|+|+| .|++||++...+++|++ +++|.
T Consensus 5 ng~C~--~~C~n~~gs~~C--~C~~Gy~L~~d~~tC~d----ide~p 43 (51)
T 1kig_L 5 NGGCD--QFCREERSEVRC--SCAHGYVLGDDSKSCVS----TERFP 43 (51)
T ss_dssp TTSSS--SCCCEETTEECC--CCCTTEEECTTSSCEEE----CSSSC
T ss_pred CCCcC--CEeEcCCCCeEE--eCCCCcEECCCCCcccc----CCccc
Confidence 56686 479999999999 99999999888999998 67775
No 96
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.09 E-value=0.0026 Score=59.69 Aligned_cols=68 Identities=25% Similarity=0.599 Sum_probs=57.0
Q ss_pred CCCCCCCCCCCCeeecC-CCCcccccCCCCcccCCCCCCCC--CCCCCCC--CCCCCeeccCC-----CCcccccCCCCC
Q psy620 107 TCATDNPCFPGVECRDT-REGPRCMRCPDGYVGDGIHCKPG--VTCNMRP--CFQGVQCFDTV-----EGYTCGPCPSGY 176 (1290)
Q Consensus 107 ~C~~~~pC~~gg~C~~~-~g~y~C~~C~~Gy~Gdg~~Cedi--deC~~~p--C~~gg~C~n~~-----g~y~C~~C~~Gy 176 (1290)
.|. ...|..++.|... .+..+| +|.+||.+++..|..+ ..|+.++ |..++.|+... +...| .|.+||
T Consensus 6 ~C~-~~~C~~NA~C~r~~~g~e~C-~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C-~C~~g~ 82 (99)
T 1ob1_C 6 QCV-KKQCPQNSGCFRHLDEREEC-KCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITC-ECTKPD 82 (99)
T ss_dssp CCC-SCCCCTTEEEECCTTSCCEE-EECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEE-EECSTT
T ss_pred Eec-cCCCCCCCCeEEcCCCCEEE-EecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEe-EeCCCC
Confidence 455 5678899999874 588999 9999999999999965 6898754 99999999774 57899 999998
Q ss_pred C
Q psy620 177 T 177 (1290)
Q Consensus 177 ~ 177 (1290)
+
T Consensus 83 ~ 83 (99)
T 1ob1_C 83 S 83 (99)
T ss_dssp C
T ss_pred c
Confidence 6
No 97
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.06 E-value=0.0015 Score=54.79 Aligned_cols=31 Identities=29% Similarity=0.771 Sum_probs=27.4
Q ss_pred CCCCCCCCeee--cCCCCcccccCCCCcccCCCCCC
Q psy620 111 DNPCFPGVECR--DTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 111 ~~pC~~gg~C~--~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
++||+|+|+|+ +..++|.| .|++||+| .+|+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C-~C~~GytG--~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYAC-NCVVGYIG--ERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEE-EECTTEES--TTSC
T ss_pred CCCCCCCeEEeeecCCCCEEE-ecCCCCcC--CCCC
Confidence 68999999998 66788999 99999999 7887
No 98
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.03 E-value=0.0026 Score=53.26 Aligned_cols=33 Identities=27% Similarity=0.628 Sum_probs=27.9
Q ss_pred CCCCCCCeEee-ecCCceEEecCCCcccCCCCcCCc
Q psy620 348 TRCDRNAKCTR-ILGNHYACKCDNGWAGDGQFCGRD 382 (1290)
Q Consensus 348 ~~C~~~g~C~~-~~~gsy~C~C~~Gy~GdG~~Ce~~ 382 (1290)
++|.++|+|+. ...++|+|.|++||+| .+|+..
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG--~~Ce~~ 45 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIG--ERCQYR 45 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEES--TTSCEE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcC--CCCCcC
Confidence 78999999983 2367899999999999 999854
No 99
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.99 E-value=0.00095 Score=74.53 Aligned_cols=44 Identities=32% Similarity=0.766 Sum_probs=35.9
Q ss_pred CCCCCCC--CCCCCCCCeeccCCCCcccccCCCCCCCCCCCceeccc
Q psy620 144 KPGVTCN--MRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGG 188 (1290)
Q Consensus 144 edideC~--~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ide 188 (1290)
++++||+ .++|..++.|+|+.|+|.| .|++||+|+|..|.++++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C-~C~~Gy~GnG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCC-RCVANYTGNGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEE-EECTTEEECSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEE-EcCCCCCCCCCcCCCCCC
Confidence 3688997 4789999999999999999 999999999989988765
No 100
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.93 E-value=0.0039 Score=58.77 Aligned_cols=67 Identities=24% Similarity=0.513 Sum_probs=56.5
Q ss_pred CCCCCCCccccc-CCCCeecccCCCCCccCCCCccccccccccCCCCcccCCC-CCCCCCCCCCCCCccccCC-CCcEEc
Q psy620 242 AEPCDPRVQCTN-LFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDE-CADGRNGGCDSNSMCTNTE-GSFTCT 318 (1290)
Q Consensus 242 ~~pC~~~g~C~n-~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dide-C~~~~~g~C~~~g~C~n~~-gsy~C~ 318 (1290)
...|..++.|.. ..+...|. |.+||.++. ..|+.+++ |..+ ++.|..++.|+.+. ..-.|
T Consensus 15 ~t~Cp~NA~C~r~~~G~e~Cr-Cl~gY~~dg--------------~~Cv~~Np~C~~n-NGGCd~nAeC~~~~~~ki~C- 77 (105)
T 1n1i_A 15 DTNVPENAACYRYLDGTEEWR-CLLGFKEVG--------------GKCVPASITCEEN-NGGCAPEAECTMDDKKEVEC- 77 (105)
T ss_dssp SSCCCTTEEEEECTTSCEEEE-ECTTEEECS--------------SSEEECCCCTTSG-GGGSCTTSEEEECTTSCEEE-
T ss_pred CCCCCCCCCeEECCCCCEeEE-EECCeeccC--------------CEEEECCcchhhc-CCCcCCCcEeEECCCCEEEe-
Confidence 346778899987 77888999 999999876 67887788 8888 89999999999885 67899
Q ss_pred CcCcCCcc
Q psy620 319 SLCRNSYM 326 (1290)
Q Consensus 319 ~~C~~Gy~ 326 (1290)
.|..+|.
T Consensus 78 -~C~~~~~ 84 (105)
T 1n1i_A 78 -KCTKEGS 84 (105)
T ss_dssp -ECCSTTC
T ss_pred -ECCCCCC
Confidence 9999974
No 101
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.89 E-value=0.002 Score=54.31 Aligned_cols=41 Identities=27% Similarity=0.724 Sum_probs=33.1
Q ss_pred CCCCC--CCCCCCCeeccCCCCcccccCCCCCC--CCCCCceecccCC
Q psy620 147 VTCNM--RPCFQGVQCFDTVEGYTCGPCPSGYT--GDGERCQRIGGCS 190 (1290)
Q Consensus 147 deC~~--~pC~~gg~C~n~~g~y~C~~C~~Gy~--Gdg~~C~~ideC~ 190 (1290)
+||+. .+|. ..|+|+.++|+| .|++||. .++++|+++++|.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C-~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVC-SCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEE-ECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEE-eCCCCCEECCCCCeeccCcccc
Confidence 56765 3575 389999999999 9999997 6677899988873
No 102
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.85 E-value=0.0018 Score=66.35 Aligned_cols=40 Identities=28% Similarity=0.803 Sum_probs=23.4
Q ss_pred CCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCC
Q psy620 148 TCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCS 190 (1290)
Q Consensus 148 eC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~ 190 (1290)
+|...||.++++|++..++|+| .|++||+|. .|+.+++|.
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c-~C~~g~~G~--~Ce~~~~c~ 160 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTC-SCYPGFYGP--ECEYVRDDD 160 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEE-EECTTEEST--TSCEECC--
T ss_pred CCcCCCCCCCCEEecCCCCceE-eCCCCCcCc--ccccCcccC
Confidence 4555566666666666666666 666666665 566655654
No 103
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.80 E-value=0.0041 Score=55.34 Aligned_cols=68 Identities=22% Similarity=0.422 Sum_probs=45.8
Q ss_pred cCCCCCC-CCCCCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCC-
Q psy620 104 KKPTCAT-DNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGE- 181 (1290)
Q Consensus 104 ~~d~C~~-~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~- 181 (1290)
+++||.. .++|.++++|+++.++|+|..|..||+++...- .+. .++.. +...+ .|++||++.+.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~----~~~-~~~~~--------~~~~~-~C~~Gy~~~~~~ 67 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE----GPP-PPVPP--------AQHPN-PCPPGYEPDDQD 67 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS----SCC-CSSCS--------CSSCC-CSCTTEEEECCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC----ccc-ccccc--------Ccccc-CCCCCeeeCCCC
Confidence 5799984 578999899999999999955778998642211 111 11211 22245 89999986554
Q ss_pred Ccee
Q psy620 182 RCQR 185 (1290)
Q Consensus 182 ~C~~ 185 (1290)
+|.+
T Consensus 68 ~C~D 71 (71)
T 2kl7_A 68 SCVD 71 (71)
T ss_dssp CSCC
T ss_pred cccC
Confidence 7763
No 104
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.75 E-value=0.0036 Score=58.71 Aligned_cols=67 Identities=27% Similarity=0.702 Sum_probs=55.3
Q ss_pred CCCCCCCccccc-CCCCeecccCCCCCccCCCCccccccccccCCCCcccC--CCCCCCCCCCCCCCCccccCC-----C
Q psy620 242 AEPCDPRVQCTN-LFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDI--DECADGRNGGCDSNSMCTNTE-----G 313 (1290)
Q Consensus 242 ~~pC~~~g~C~n-~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~di--deC~~~~~g~C~~~g~C~n~~-----g 313 (1290)
...|..++.|.. ..+...|. |.+||.++. ..|..+ ..|+.+ ++.|..++.|+... +
T Consensus 9 ~~~C~~NA~C~r~~~g~e~C~-C~~gy~gdg--------------~~Cv~~~~~sC~~n-NGGCd~nA~C~~~~~~~~~~ 72 (99)
T 1ob1_C 9 KKQCPQNSGCFRHLDEREECK-CLLNYKQEG--------------DKCVENPNPTCNEN-NGGCDADAKCTEEDSGSNGK 72 (99)
T ss_dssp SCCCCTTEEEECCTTSCCEEE-ECTTEEEET--------------TEEEECSCCCSTTG-GGGCCTTEEEECCSCSSSSC
T ss_pred cCCCCCCCCeEEcCCCCEEEE-ecCCeecCC--------------CeEeeCCCCChhhc-CCCcCCCceeEecCCcccCC
Confidence 456778899977 56788999 999999865 568666 589987 78999999999875 5
Q ss_pred CcEEcCcCcCCcc
Q psy620 314 SFTCTSLCRNSYM 326 (1290)
Q Consensus 314 sy~C~~~C~~Gy~ 326 (1290)
...| .|.+||.
T Consensus 73 ki~C--~C~~g~~ 83 (99)
T 1ob1_C 73 KITC--ECTKPDS 83 (99)
T ss_dssp CCEE--EECSTTC
T ss_pred ceEe--EeCCCCc
Confidence 6899 9999984
No 105
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.61 E-value=0.0048 Score=51.21 Aligned_cols=40 Identities=20% Similarity=0.469 Sum_probs=33.0
Q ss_pred cCCCCCCccCCCCCCCCCccCCCCCCCC--CCCCccCCCCCCCCCCC
Q psy620 682 RALKASVRCDDIPEHPYYRCGSCPEGTT--GNGTRCHDIDEDNCVHI 726 (1290)
Q Consensus 682 ~~C~~~~~C~~~~~~g~y~C~~C~~Gy~--Gng~~C~~~~~~~C~~~ 726 (1290)
.+|. ..| +++.++|+|. |++||. .++++|.+++|.+|...
T Consensus 6 g~C~--~~C--~n~~gs~~C~-C~~Gy~L~~d~~tC~dide~pCg~~ 47 (51)
T 1kig_L 6 GGCD--QFC--REERSEVRCS-CAHGYVLGDDSKSCVSTERFPCGKF 47 (51)
T ss_dssp TSSS--SCC--CEETTEECCC-CCTTEEECTTSSCEEECSSSCTTCC
T ss_pred CCcC--CEe--EcCCCCeEEe-CCCCcEECCCCCccccCCcccCCCc
Confidence 3454 357 6778999997 999997 88999999999999864
No 106
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.55 E-value=0.0094 Score=56.23 Aligned_cols=70 Identities=20% Similarity=0.437 Sum_probs=58.6
Q ss_pred CCCCCCCCCCCCCCeeec-CCCCcccccCCCCcccCCCCCCCCCC-CCCCC--CCCCCeeccCC-CCcccccCCCCCC
Q psy620 105 KPTCATDNPCFPGVECRD-TREGPRCMRCPDGYVGDGIHCKPGVT-CNMRP--CFQGVQCFDTV-EGYTCGPCPSGYT 177 (1290)
Q Consensus 105 ~d~C~~~~pC~~gg~C~~-~~g~y~C~~C~~Gy~Gdg~~Cedide-C~~~p--C~~gg~C~n~~-g~y~C~~C~~Gy~ 177 (1290)
...|. ..-|..++.|.. ..+..+| +|..||.+++..|..++. |..+. |..++.|+.+. ....| .|.++|.
T Consensus 10 ~h~C~-~t~Cp~NA~C~r~~~G~e~C-rCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C-~C~~~~~ 84 (105)
T 1n1i_A 10 AHKCI-DTNVPENAACYRYLDGTEEW-RCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVEC-KCTKEGS 84 (105)
T ss_dssp TTSCC-SSCCCTTEEEEECTTSCEEE-EECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEE-ECCSTTC
T ss_pred CcEec-CCCCCCCCCeEECCCCCEeE-EEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEe-ECCCCCC
Confidence 35676 557889999987 5688899 999999999999997787 76644 99999999885 78899 9999975
No 107
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.54 E-value=0.0041 Score=55.02 Aligned_cols=48 Identities=19% Similarity=0.333 Sum_probs=38.8
Q ss_pred ccCCccCC-CCCCCCCcccccCCC-CeecccCCCCCccCCCCccccccccccCCCCcccCCCCCC
Q psy620 234 HDIDECDL-AEPCDPRVQCTNLFP-GYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECAD 296 (1290)
Q Consensus 234 ~dideC~~-~~pC~~~g~C~n~~g-sy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~~ 296 (1290)
++++||.. ...|. ..|+++.+ +|+|. |++||.... ++++|.+++||.-
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~-C~~Gy~L~~------------D~~tC~d~dec~C 52 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCR-CHEGYSLLA------------DGVSCTPTVEYPC 52 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEE-CCTTEEECT------------TSSCEEECSSSCT
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEe-CCCCCeECC------------CCCcccCcccccC
Confidence 46888974 24576 57999998 89999 999998765 6788999999863
No 108
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=95.53 E-value=0.0053 Score=50.90 Aligned_cols=38 Identities=34% Similarity=0.716 Sum_probs=29.9
Q ss_pred CCCCCCCC----------CCCCCCCeeccCCCCcccccCCCCCCC--CCCCce
Q psy620 144 KPGVTCNM----------RPCFQGVQCFDTVEGYTCGPCPSGYTG--DGERCQ 184 (1290)
Q Consensus 144 edideC~~----------~pC~~gg~C~n~~g~y~C~~C~~Gy~G--dg~~C~ 184 (1290)
++++||.. .+|. ++|+|+.|+|+| .|++||++ +++.|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C-~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFC-SCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEE-ECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEE-ECCCCCeECCCCCccC
Confidence 36788875 5786 499999999999 99999985 345554
No 109
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.51 E-value=0.0037 Score=52.32 Aligned_cols=43 Identities=30% Similarity=0.841 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCCccccCCC-CcEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 294 CADGRNGGCDSNSMCTNTEG-SFTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 294 C~~~~~g~C~~~g~C~n~~g-sy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
|+.. ++.|. ..|+++.+ +|+| .|++||++..++++|++ +++|.
T Consensus 2 C~~~-nggC~--~~C~n~~ggs~~C--~C~~Gy~L~~Dg~tC~d----~dec~ 45 (53)
T 2bz6_L 2 CVNE-NGGCE--QYCSDHTGTKRSC--RCHEGYSLLADGVSCTP----TVEYP 45 (53)
T ss_dssp TTSG-GGGCS--SEEEEETTTEEEE--ECCTTEEECTTSSCEEE----CSSSC
T ss_pred CcCC-CCCcC--CEeEcCCCCCEEe--eCCCCCEECCCCCcccC----Ccccc
Confidence 4444 55686 57999999 7999 99999999988999998 78886
No 110
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.47 E-value=0.011 Score=58.13 Aligned_cols=58 Identities=24% Similarity=0.672 Sum_probs=43.6
Q ss_pred CCCCCCeeecCC--CCc-ccccCCCCcccCCCCCC-CCCCCCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCcee
Q psy620 113 PCFPGVECRDTR--EGP-RCMRCPDGYVGDGIHCK-PGVTCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 113 pC~~gg~C~~~~--g~y-~C~~C~~Gy~Gdg~~Ce-dideC~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
||+|||+|++.. .+| +| .|++||+| ..|+ +++ .+|..+ ....|++ .+..+++|. .|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C-~Cp~g~~G--~~Ce~~~~----~~C~~g-----~G~~YrG-~~~~t~sG~--~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWC-NCPKKFGG--QHCEIDKS----KTCYEG-----NGHFYRG-KASTDTMGR--PCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEE-ECCTTEES--TTSCEESS----CCSBCS-----SCTTCCS-CCCBBTTSC--BBCC
T ss_pred CCCCcCCcCCCcccCCCCCc-cCCCCCCC--ccccccCc----CCCccc-----cccccee-eccccccCC--cccC
Confidence 899999999874 566 99 99999999 8998 332 234322 1347899 899998887 7765
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.79 E-value=0.031 Score=54.95 Aligned_cols=58 Identities=16% Similarity=0.367 Sum_probs=40.6
Q ss_pred CCCCCCeEeeec-CCce-EEecCCCcccCCCCcCCcCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCccccCCCCCCC
Q psy620 349 RCDRNAKCTRIL-GNHY-ACKCDNGWAGDGQFCGRDTDLDGWPDYDLACPDRKCRKDNCVHIPNSGINNHADNCPRNANP 426 (1290)
Q Consensus 349 ~C~~~g~C~~~~-~gsy-~C~C~~Gy~GdG~~Ce~~~d~d~~~~~~~~C~~~~C~ng~C~~~~gs~~~~~~C~C~~Gy~G 426 (1290)
+|.++|+|++.. ..+| +|.|++||+| ..|+.+++ ..|..+ .| ..|.+.+..+++|
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G--~~Ce~~~~-------------~~C~~g-----~G---~~YrG~~~~t~sG 58 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCEIDKS-------------KTCYEG-----NG---HFYRGKASTDTMG 58 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEES--TTSCEESS-------------CCSBCS-----SC---TTCCSCCCBBTTS
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCC--ccccccCc-------------CCCccc-----cc---ccceeeccccccC
Confidence 699999998762 1445 9999999999 99986543 123322 12 2578899888877
Q ss_pred CCC
Q psy620 427 DQR 429 (1290)
Q Consensus 427 ~~~ 429 (1290)
..+
T Consensus 59 ~~C 61 (122)
T 2fd6_A 59 RPC 61 (122)
T ss_dssp CBB
T ss_pred Ccc
Confidence 643
No 112
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.31 E-value=0.022 Score=48.62 Aligned_cols=31 Identities=32% Similarity=0.712 Sum_probs=26.1
Q ss_pred CCCCCCeEeee---cCCceEEecCCCcccCCCCcCC
Q psy620 349 RCDRNAKCTRI---LGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 349 ~C~~~g~C~~~---~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
+|.|+|+|+.. ..++|.|.|++||+| .+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G--~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG--QRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEES--SSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCcc--CCCcc
Confidence 79999999843 245799999999999 99974
No 113
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=94.28 E-value=0.022 Score=48.68 Aligned_cols=38 Identities=26% Similarity=0.787 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCccccCC-CCcEEcCcCcCCccccCCCCCCCC
Q psy620 294 CADGRNGGCDSNSMCTNTE-GSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 294 C~~~~~g~C~~~g~C~n~~-gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
|+.. ++.|. ..|++++ |+|+| .|++||.+..++++|.+
T Consensus 2 C~~~-nggC~--~~C~n~~~gs~~C--~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIK-NGRCE--QFCKNSADNKVVC--SCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTG-GGGCS--SEEEECSTTCEEE--ECCTTEEECTTSSCEEE
T ss_pred CcCC-CCCcC--CEeEeCCCCCEEe--eCCCCcEECCCCCcccC
Confidence 4444 56686 5899999 69999 99999999888999987
No 114
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=93.76 E-value=0.014 Score=49.77 Aligned_cols=30 Identities=23% Similarity=0.636 Sum_probs=25.5
Q ss_pred CCCCCCCeee--c--CCCCcccccCCCCcccCCCCCC
Q psy620 112 NPCFPGVECR--D--TREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 112 ~pC~~gg~C~--~--~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
+||+|+|+|+ . ...+|.| .|++||+| .+|+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~~~C-~C~~Gf~G--~~Ce 47 (58)
T 3ltf_D 14 WYCLNDAHCFAVKIADLPVYSC-ECAIGFMG--QRCE 47 (58)
T ss_dssp HTSCSSCEEEEEEETTEEEEEE-EECTTEES--SSSC
T ss_pred CcCCCCCEEeCCccCCCCCEEe-ECCCCCcc--CCCc
Confidence 3899999998 3 4467899 99999999 7888
No 115
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=93.59 E-value=0.017 Score=48.28 Aligned_cols=31 Identities=39% Similarity=0.937 Sum_probs=27.8
Q ss_pred eeccCCC-CCccccCCCCcc--CCCccccCCCCcC
Q psy620 601 ECRDTRE-GPRCMRCPDGYV--GDGIHCKPGVTCN 632 (1290)
Q Consensus 601 ~C~~~~~-g~~Cg~Cp~G~~--Gdg~~C~dideC~ 632 (1290)
.|+++.+ +|+| .|++||+ .|+++|++|+||.
T Consensus 12 ~C~n~~ggs~~C-~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 12 YCSDHTGTKRSC-RCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp EEEEETTTEEEE-ECCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCCCEEe-eCCCCCEECCCCCcccCCcccc
Confidence 6999998 6999 8999997 6899999999994
No 116
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.03 E-value=0.026 Score=69.33 Aligned_cols=37 Identities=30% Similarity=0.814 Sum_probs=34.5
Q ss_pred CCCCCCCCCCCCCeecc-CCCCcccccCC-CCCCCCCCCcee
Q psy620 146 GVTCNMRPCFQGVQCFD-TVEGYTCGPCP-SGYTGDGERCQR 185 (1290)
Q Consensus 146 ideC~~~pC~~gg~C~n-~~g~y~C~~C~-~Gy~Gdg~~C~~ 185 (1290)
+++|.++||.++|+|++ ..++|+| .|+ +||+|. .|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C-~C~~~G~~G~--~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQC-DCTRTGYSGP--NCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEE-ECTTSSEETT--TTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEe-eCCCCCcCCC--CCCC
Confidence 57899999999999999 8999999 999 999998 8875
No 117
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.98 E-value=0.028 Score=68.99 Aligned_cols=36 Identities=28% Similarity=0.673 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCCCeeec-CCCCcccccCC-CCcccCCCCCC
Q psy620 105 KPTCATDNPCFPGVECRD-TREGPRCMRCP-DGYVGDGIHCK 144 (1290)
Q Consensus 105 ~d~C~~~~pC~~gg~C~~-~~g~y~C~~C~-~Gy~Gdg~~Ce 144 (1290)
+++|. ++||+|+|+|.+ ..++|.| .|+ +||+| ..|+
T Consensus 2 ~d~C~-~~PC~ngG~C~~~~~~~y~C-~C~~~G~~G--~~Ce 39 (553)
T 1q4g_A 2 VNPCC-YYPCQHQGICVRFGLDRYQC-DCTRTGYSG--PNCT 39 (553)
T ss_dssp CCGGG-GCCCCTTCEEEEETTTEEEE-ECTTSSEET--TTTC
T ss_pred CCcCC-CCCCCCCCCcCCCCCCceEe-eCCCCCcCC--CCCC
Confidence 47898 999999999999 8899999 999 99999 7887
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.32 E-value=0.047 Score=67.19 Aligned_cols=36 Identities=31% Similarity=0.809 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCCCeeec-CCCCcccccCC-CCcccCCCCCC
Q psy620 105 KPTCATDNPCFPGVECRD-TREGPRCMRCP-DGYVGDGIHCK 144 (1290)
Q Consensus 105 ~d~C~~~~pC~~gg~C~~-~~g~y~C~~C~-~Gy~Gdg~~Ce 144 (1290)
+++|. ++||+|+|+|++ ..++|.| .|+ +||+| ..|+
T Consensus 1 vd~C~-s~PC~ngG~C~~~~~~~y~C-~C~~~G~~G--~~Ce 38 (587)
T 3nt1_A 1 ANPCC-SNPCQNRGECMSTGFDQYKC-DCTRTGFYG--ENCT 38 (587)
T ss_dssp CCTTT-TCCCCTTCEEEEEETTEEEE-ECTTSSEET--TTTC
T ss_pred CCCCC-CCCCCCCCEeeCCCCCCeEE-ecCCCCccC--CCCC
Confidence 37898 999999999995 4588999 999 99999 7787
No 119
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.20 E-value=0.084 Score=65.00 Aligned_cols=38 Identities=26% Similarity=0.742 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCCeEeeecCCceEEecC-CCcccCCCCcCC
Q psy620 341 ADVCPDGTRCDRNAKCTRILGNHYACKCD-NGWAGDGQFCGR 381 (1290)
Q Consensus 341 id~C~~~~~C~~~g~C~~~~~gsy~C~C~-~Gy~GdG~~Ce~ 381 (1290)
+++|. .++|.++|+|++...++|+|.|+ +||+| .+|+.
T Consensus 1 vd~C~-s~PC~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce~ 39 (587)
T 3nt1_A 1 ANPCC-SNPCQNRGECMSTGFDQYKCDCTRTGFYG--ENCTT 39 (587)
T ss_dssp CCTTT-TCCCCTTCEEEEEETTEEEEECTTSSEET--TTTCE
T ss_pred CCCCC-CCCCCCCCEeeCCCCCCeEEecCCCCccC--CCCCC
Confidence 36787 58999999999754689999999 99999 88974
No 120
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.11 E-value=0.053 Score=55.41 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCCceeccCCCCCccccCCCCccCCCccccCCCCcC
Q psy620 586 KKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCN 632 (1290)
Q Consensus 586 ~~~~C~~~nPC~~g~~C~~~~~g~~Cg~Cp~G~~Gdg~~C~dideC~ 632 (1290)
.+..|. +++|.++++|++...+|+| .|++||+| .+|+.+.+|.
T Consensus 118 e~~~~~-~~~C~~~g~C~~~~~~~~c-~C~~g~~g--~~C~~~~~c~ 160 (164)
T 3cfw_A 118 YTASCQ-PWSCSGHGECVEIINNYTC-NCDVGYYG--PQCQFVQVDP 160 (164)
T ss_dssp EECCCC-TTSSCSSEEEEEETTEEEE-EECTTCBS--SSSCBC----
T ss_pred ccCCCC-CCcCCCCCeecccCCCcee-eeCCCccc--ccccccccCc
Confidence 344576 6999999999999999999 99999999 4899888885
No 121
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=90.88 E-value=0.045 Score=56.58 Aligned_cols=48 Identities=23% Similarity=0.712 Sum_probs=37.2
Q ss_pred CCcccCCCCCCCCCCCCCCC-----CCCCCeeccCCCCcccccCCCCCC--CCCCCcee
Q psy620 134 DGYVGDGIHCKPGVTCNMRP-----CFQGVQCFDTVEGYTCGPCPSGYT--GDGERCQR 185 (1290)
Q Consensus 134 ~Gy~Gdg~~CedideC~~~p-----C~~gg~C~n~~g~y~C~~C~~Gy~--Gdg~~C~~ 185 (1290)
.||.+. ..|.++++|...+ |.+ .|+++.++|+| .|++||+ +++++|+.
T Consensus 113 ~Gf~~~-~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C-~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAF-YAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYC-SCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEE-EEEEECCTTCCCTTSCCSSSS--EEEEETTEEEE-ECCTTEEECTTSSCEEE
T ss_pred cCceee-eeccccCcccCCCCCCCccCC--ccccCCCCEEE-eCCCCcEECCCCCcccc
Confidence 677762 3456788998754 765 79999999999 9999998 56667765
No 122
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.72 E-value=0.21 Score=50.62 Aligned_cols=59 Identities=22% Similarity=0.574 Sum_probs=39.4
Q ss_pred CCCCCCCCeeecC--CCCc-ccccCCCCcccCCCCCC-CCCCCCCCCCCCCCeeccCCC-CcccccCCCCCCCCCCCcee
Q psy620 111 DNPCFPGVECRDT--REGP-RCMRCPDGYVGDGIHCK-PGVTCNMRPCFQGVQCFDTVE-GYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 111 ~~pC~~gg~C~~~--~g~y-~C~~C~~Gy~Gdg~~Ce-dideC~~~pC~~gg~C~n~~g-~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
..||+|||+|+.. ...+ +| .|++||+| ..|+ ++++ .|....| .|+. ......+|. .|+.
T Consensus 12 ~cpC~NGGtC~~~~~~s~~~~C-~Cp~g~~G--~~Cei~~~~----------~C~~g~G~~YrG-~~s~T~sG~--~Cq~ 75 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYFSNIHWC-NCPKKFGG--QHCEIDKSK----------TCYEGNGHFYRG-KASTDTMGR--PCLP 75 (145)
T ss_dssp CCCCCTTCEEEECSSSTTCEEE-ECCTTEES--TTSCEESSC----------CEECTTCTTCCS-CCCBBTTSC--BCCC
T ss_pred CCCCCCCCCcCCCccccCCccc-cCCCCCCC--Cceeccccc----------cCCCCCcccccc-ceecCCcCC--cccC
Confidence 3489999999876 3556 89 99999999 7998 3321 2443332 5666 566555555 6654
No 123
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=89.67 E-value=0.12 Score=52.86 Aligned_cols=39 Identities=31% Similarity=0.761 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeeccCCCCcccccCCCCCCCCCCCceecccCC
Q psy620 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRIGGCS 190 (1290)
Q Consensus 149 C~~~pC~~gg~C~n~~g~y~C~~C~~Gy~Gdg~~C~~ideC~ 190 (1290)
|...+|..+++|.+..++|.| .|++||+|. .|+.+.+|.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c-~C~~g~~g~--~C~~~~~c~ 160 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTC-NCDVGYYGP--QCQFVQVDP 160 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEE-EECTTCBSS--SSCBC----
T ss_pred CCCCcCCCCCeecccCCCcee-eeCCCcccc--cccccccCc
Confidence 445566666666666666666 666666666 666655554
No 124
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=89.14 E-value=0.13 Score=53.14 Aligned_cols=44 Identities=39% Similarity=0.853 Sum_probs=36.1
Q ss_pred cccCCCCCCCCCCC---CCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 288 CVDIDECADGRNGG---CDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 288 C~dideC~~~~~g~---C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
+.+++||... .+. |.+ .|+++.|+|+| .|++||++...++.|+.
T Consensus 121 ~~di~eC~~~-~~~~~~C~~--~C~n~~g~~~C--~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 121 AEDIDECQVA-PGEAPTCDH--HCHNHLGGFYC--SCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp EEECCTTCCC-TTSCCSSSS--EEEEETTEEEE--ECCTTEEECTTSSCEEE
T ss_pred ccccCcccCC-CCCCCccCC--ccccCCCCEEE--eCCCCcEECCCCCcccc
Confidence 5688999876 443 874 79999999999 99999998777777865
No 125
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=88.40 E-value=0.22 Score=42.43 Aligned_cols=36 Identities=22% Similarity=0.623 Sum_probs=26.7
Q ss_pred CeeccCC-CCcccccCCCCCC--CCCCCceecccCCCCCCCCC
Q psy620 158 VQCFDTV-EGYTCGPCPSGYT--GDGERCQRIGGCSRNPCAQG 197 (1290)
Q Consensus 158 g~C~n~~-g~y~C~~C~~Gy~--Gdg~~C~~ideC~~~pC~~g 197 (1290)
..|+++. ++|+| .|++||. .++++|.++++ .||...
T Consensus 11 ~~C~n~~~gs~~C-~C~~Gy~L~~D~~tC~d~~~---~pC~~~ 49 (59)
T 2wph_E 11 QFCKNSADNKVVC-SCTEGYRLAENQKSCEPAVP---FPCGRV 49 (59)
T ss_dssp SEEEECSTTCEEE-ECCTTEEECTTSSCEEESSS---SCTTCC
T ss_pred CEeEeCCCCCEEe-eCCCCcEECCCCCcccCCCC---CCCCCc
Confidence 3799988 59999 9999997 56778887543 456543
No 126
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=88.11 E-value=0.28 Score=40.50 Aligned_cols=33 Identities=39% Similarity=0.949 Sum_probs=24.3
Q ss_pred CCCCCCCCeeecC--CCCcccccCCCCcccCCCCCCCCC
Q psy620 111 DNPCFPGVECRDT--REGPRCMRCPDGYVGDGIHCKPGV 147 (1290)
Q Consensus 111 ~~pC~~gg~C~~~--~g~y~C~~C~~Gy~Gdg~~Cedid 147 (1290)
.+.|.|| +|... ...+.| .|++||+| .+|+..+
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C-~C~~gy~G--~RCe~~d 47 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPAC-VCHSGYVG--ARCEHAD 47 (50)
T ss_pred cCcccCC-EEeeccCCCCeEE-ECCCCCcc--cCCCcee
Confidence 5778876 88753 366888 89999988 6787443
No 127
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=86.26 E-value=0.28 Score=49.69 Aligned_cols=45 Identities=29% Similarity=0.691 Sum_probs=35.4
Q ss_pred cccCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 288 CVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 288 C~dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
+.+++||.......|. +.|.++.++|+| .|++||.+...++.|+.
T Consensus 114 ~~d~~eC~~~~~~~C~--~~C~n~~g~~~C--~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS--HFCNNFIGGYFC--SCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEECCTTTC-CCCCSS--SEEEEETTEEEE--ECCTTCEECTTSSCEEC
T ss_pred cccCcccCCCCCCCCC--CcccCcCCCEEE--ecCCCcEECCCCCcccc
Confidence 5678899864234585 589999999999 99999998777777764
No 128
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=86.10 E-value=0.38 Score=53.71 Aligned_cols=47 Identities=30% Similarity=0.748 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCC
Q psy620 291 IDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCP 345 (1290)
Q Consensus 291 ideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~ 345 (1290)
+|||....++.|. ..|.++.++|+| .|..||.+....+.|.. .++|.
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C--~C~~G~~l~~d~~sC~p----~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTC--SCAQGYRLGEDHKQCVP----HDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCC--BCCTTEEECTTSSCEEE----CSTTC
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEe--cCCCCcccCCCCCcccc----ccccc
Confidence 5788765347797 689999999999 99999999888889988 56665
No 129
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=86.01 E-value=0.51 Score=38.92 Aligned_cols=31 Identities=26% Similarity=0.682 Sum_probs=25.1
Q ss_pred CCCCCCCeEeee-cCCceEEecCCCcccCCCCcCC
Q psy620 348 TRCDRNAKCTRI-LGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 348 ~~C~~~g~C~~~-~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
+.|.++ +|... ..+.+.|.|++||+| .+||.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G--~RCe~ 45 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVG--ARCEH 45 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcc--cCCCc
Confidence 678875 99864 246799999999999 89973
No 130
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=85.59 E-value=0.31 Score=49.08 Aligned_cols=37 Identities=35% Similarity=0.897 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCCc
Q psy620 342 DVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGRD 382 (1290)
Q Consensus 342 d~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~~ 382 (1290)
.+|. ..+|.+++.|.+. ..+|.|.|.+||+| .+||..
T Consensus 120 ~~~~-~~pc~~~g~C~~~-~~~~~c~C~~g~~g--~~Ce~~ 156 (157)
T 1g1t_A 120 AACT-NTSCSGHGECVET-INNYTCKCDPGFSG--LKCEQI 156 (157)
T ss_dssp CCCC-TTGGGGSEEEEEE-TTEEEEEECTTEES--TTSCEE
T ss_pred CCCC-CCCCCCCCEeecC-CCCeeEECCCCccC--cccccc
Confidence 4565 4789999999998 88999999999999 889753
No 131
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=84.89 E-value=0.53 Score=47.60 Aligned_cols=30 Identities=27% Similarity=0.861 Sum_probs=25.8
Q ss_pred CCCCCCeeccC--CCCc-ccccCCCCCCCCCCCcee
Q psy620 153 PCFQGVQCFDT--VEGY-TCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 153 pC~~gg~C~n~--~g~y-~C~~C~~Gy~Gdg~~C~~ 185 (1290)
||.++++|+.. ...| +| .|++||.|. .|+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C-~Cp~g~~G~--~Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWC-NCPKKFGGQ--HCEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEE-ECCTTEEST--TSCE
T ss_pred CCCCCCCcCCCccccCCccc-cCCCCCCCC--ceec
Confidence 89999999876 3566 89 999999998 8975
No 132
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=84.52 E-value=0.92 Score=37.39 Aligned_cols=36 Identities=28% Similarity=0.707 Sum_probs=26.7
Q ss_pred CCCCCC--CCCCCCCeEeee-cCCceEEecCCCcccCCCCcC
Q psy620 342 DVCPDG--TRCDRNAKCTRI-LGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 342 d~C~~~--~~C~~~g~C~~~-~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
++|... +.|.+ |+|... ..+.+.|.|++||+| .+|+
T Consensus 10 ~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G--~RCe 48 (50)
T 2rnl_A 10 NPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFG--ERCG 48 (50)
T ss_dssp CTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCS--SSCC
T ss_pred cccCchhhCcCCC-CEEEEecCCCCeeEECCCCccc--cccc
Confidence 445432 67886 599843 356789999999999 8896
No 133
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=84.45 E-value=0.6 Score=38.47 Aligned_cols=31 Identities=29% Similarity=0.801 Sum_probs=24.9
Q ss_pred CCCCCCCeEeee-cCCceEEecCCCcccCCCCcCC
Q psy620 348 TRCDRNAKCTRI-LGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 348 ~~C~~~g~C~~~-~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
+.|.+ |+|... ..+.+.|+|++||+| .+||.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G--~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIG--ARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEET--TTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCccc--CCCCe
Confidence 67888 799643 356789999999999 99974
No 134
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=84.32 E-value=0.68 Score=38.15 Aligned_cols=36 Identities=36% Similarity=0.915 Sum_probs=26.6
Q ss_pred CCCCCCC---CCCCCCCeec--cCCCCcccccCCCCCCCCCCCce
Q psy620 145 PGVTCNM---RPCFQGVQCF--DTVEGYTCGPCPSGYTGDGERCQ 184 (1290)
Q Consensus 145 dideC~~---~pC~~gg~C~--n~~g~y~C~~C~~Gy~Gdg~~C~ 184 (1290)
..++|.. +.|.++ +|. ...+.+.| .|++||+|. +|+
T Consensus 8 ~~~~C~~~~~~yC~nG-~C~~i~~~~~~~C-~C~~gy~G~--RCe 48 (50)
T 2rnl_A 8 KKNPCNAEFQNFCIHG-ECKYIEHLEAVTC-KCQQEYFGE--RCG 48 (50)
T ss_dssp CCCTTTTTGGGTCSSS-EEEEETTTTEEEE-ECCSSCCSS--SCC
T ss_pred cCcccCchhhCcCCCC-EEEEecCCCCeeE-ECCCCcccc--ccc
Confidence 3445553 568875 997 55667899 999999998 876
No 135
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=83.72 E-value=0.49 Score=39.00 Aligned_cols=30 Identities=33% Similarity=0.994 Sum_probs=23.2
Q ss_pred CCCCCCCCeee--cCCCCcccccCCCCcccCCCCCC
Q psy620 111 DNPCFPGVECR--DTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 111 ~~pC~~gg~C~--~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
.+.|.| |+|. ...+.+.| .|++||+| .+|+
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C-~C~~gy~G--~RCe 44 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSC-VCDEGYIG--ARCE 44 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEE-CCCTTEET--TTTC
T ss_pred cCcccC-CEEEeEcCCCCeEE-ECCCCccc--CCCC
Confidence 577888 6886 44466889 99999999 6887
No 136
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=83.42 E-value=0.54 Score=42.42 Aligned_cols=31 Identities=23% Similarity=0.585 Sum_probs=24.4
Q ss_pred CCCCCCCeEeee-cCCceEEecCCCcccCCCCcCC
Q psy620 348 TRCDRNAKCTRI-LGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 348 ~~C~~~g~C~~~-~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
+.|.++ +|... ..+.+.|.|.+||+| .+|+.
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG--~RCE~ 77 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCICHPGYHG--ERCHG 77 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEEECTTEES--TTCCE
T ss_pred CcCCCC-EeeeecCCCCeEEEcCCCccc--ccccc
Confidence 678875 89543 246789999999999 89973
No 137
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=83.41 E-value=0.34 Score=55.70 Aligned_cols=40 Identities=40% Similarity=0.961 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 291 IDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 291 ideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
++||+ . ++.|. ..|+|+.|+|+| .|++||.+...+++|..
T Consensus 1 i~ec~-~-~~~C~--~~C~n~~g~~~C--~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 1 VNECA-E-EGYCS--QGCTNSEGAFQC--WCEAGYELRPDRRSCKA 40 (349)
T ss_dssp ----------CCS--SEECCC---CCE--ECCTTEEECTTSSCEEE
T ss_pred CcccC-C-CCCCc--CeeecCCCCeEE--ECCCCccCCCCCCcccc
Confidence 57887 4 57797 589999999999 99999998877888875
No 138
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=82.87 E-value=0.24 Score=57.74 Aligned_cols=93 Identities=18% Similarity=0.480 Sum_probs=45.8
Q ss_pred CceecCCCCCCCcCCCCccccCCccCC---CCCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccC
Q psy620 215 PYYRCGSCPEGTTGNGTRCHDIDECDL---AEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDI 291 (1290)
Q Consensus 215 g~y~C~~C~~Gy~Gdg~~C~dideC~~---~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~di 291 (1290)
.++.| .|+++|.| ..|+ .|.. ..+|.. +.|.+..+-..|. |.. .|..|... ..+
T Consensus 270 ~~~~C-~C~~nt~G--~~Ce---~C~~gy~~~p~~~-g~~~~~~~C~~C~-Cn~--~g~~C~~d-------------~~~ 326 (375)
T 4aqt_A 270 DKLMC-NCKHNTYG--VDCE---KCLPFFNDRPWRR-ATAESASECLPCD-CNG--RSQECYFD-------------PEL 326 (375)
T ss_dssp SCEEE-CCCTTEES--TTSC---EECTTCCSSCCCC-CCSSCCCCCCCCC-GGG--SCSCEEEC-------------HHH
T ss_pred CCeee-eCcCCCcC--CCcc---cCCCCCcCCCCCC-CccCCCCCCCCCc-CcC--CCCCcccc-------------ccc
Confidence 46788 89999998 7775 2331 234432 3444433333455 543 22222100 011
Q ss_pred CCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCC
Q psy620 292 DECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335 (1290)
Q Consensus 292 deC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~ 335 (1290)
..|... .|.|. .|.....+.+|+ +|.+||++......|+
T Consensus 327 ~~c~~~-~G~C~---~C~~n~~G~~Ce-~C~~Gyyg~~~~~~C~ 365 (375)
T 4aqt_A 327 YRSTGH-GGHCT---NCRDNTDGAKCE-RCRENFFRLGNTEACS 365 (375)
T ss_dssp HHHSSC-CEEEC---SCTTTEESTTSC-EECSSEECCTTCSSCE
T ss_pred CccCCC-CCCCC---CCCCCCcCCCCC-CCCcCcccCcCCCCCc
Confidence 223222 23342 244444556786 8888887654444444
No 139
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=82.83 E-value=0.27 Score=49.60 Aligned_cols=35 Identities=29% Similarity=0.858 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCCCeeecCCCCcccccCCCCcccCCCCCC
Q psy620 106 PTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK 144 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce 144 (1290)
++|. +.||.+++.|.+....|.| .|.+||+| .+||
T Consensus 120 ~~~~-~~pc~~~g~C~~~~~~~~c-~C~~g~~g--~~Ce 154 (157)
T 1g1t_A 120 AACT-NTSCSGHGECVETINNYTC-KCDPGFSG--LKCE 154 (157)
T ss_dssp CCCC-TTGGGGSEEEEEETTEEEE-EECTTEES--TTSC
T ss_pred CCCC-CCCCCCCCEeecCCCCeeE-ECCCCccC--cccc
Confidence 5566 6777777777777777777 77777777 4665
No 140
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=81.76 E-value=0.77 Score=48.05 Aligned_cols=34 Identities=35% Similarity=0.969 Sum_probs=27.0
Q ss_pred cCCCCCCCCCCCCCCceeccCCCCCccccCCCCccCCCcccc
Q psy620 585 VKKPTCATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCK 626 (1290)
Q Consensus 585 ~~~~~C~~~nPC~~g~~C~~~~~g~~Cg~Cp~G~~Gdg~~C~ 626 (1290)
+..+.|. .+|.||+.|+. -.+| .||+||+| .+|+
T Consensus 146 C~~~~C~--~~C~ngG~Cv~---P~~C-~C~~Gw~G--~~C~ 179 (188)
T 2ygo_A 146 CQQAECP--GGCRNGGFCNE---RRIC-ECPDGFHG--PHCE 179 (188)
T ss_dssp ECCCCCT--TCCCTTCEECT---TSCE-ECCTTCBT--TTTC
T ss_pred ccCCccC--CCCCCCCEeCC---CCcc-cCcCCCCC--CCCc
Confidence 4556785 79999999994 3489 89999998 5665
No 141
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=81.52 E-value=0.38 Score=43.40 Aligned_cols=31 Identities=32% Similarity=0.921 Sum_probs=21.6
Q ss_pred CCCCCCCCeec--cCCCCcccccCCCCCCCCCCCcee
Q psy620 151 MRPCFQGVQCF--DTVEGYTCGPCPSGYTGDGERCQR 185 (1290)
Q Consensus 151 ~~pC~~gg~C~--n~~g~y~C~~C~~Gy~Gdg~~C~~ 185 (1290)
.+.|.+| +|. ...+.+.| .|++||+|. +|+.
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C-~C~~GYtG~--RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSC-ICHPGYHGE--RCHG 77 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCE-EECTTEEST--TCCE
T ss_pred cCcCCCC-EeeeecCCCCeEE-EcCCCcccc--cccc
Confidence 3567775 784 33357788 888888888 7764
No 142
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=81.28 E-value=0.71 Score=54.32 Aligned_cols=36 Identities=25% Similarity=0.684 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCCCCeeecCCCCcccccCCC-CcccCCCCCC
Q psy620 105 KPTCATDNPCFPGVECRDTREGPRCMRCPD-GYVGDGIHCK 144 (1290)
Q Consensus 105 ~d~C~~~~pC~~gg~C~~~~g~y~C~~C~~-Gy~Gdg~~Ce 144 (1290)
.++|. .+||.++++|+....+|.| .|+. ||+| +.|+
T Consensus 185 ~~~C~-~~pC~n~g~C~~~~~~~~C-~C~~~~~~G--~~C~ 221 (410)
T 3asi_A 185 STTCQ-EDSCSNQGVCLQQWDGFSC-DCSMTSFSG--PLCN 221 (410)
T ss_dssp SSCCC-TTSSSTTCEEEECSSSEEE-ECTTTSEES--TTSC
T ss_pred CCCcc-cccCCCCCEecCCCCCceE-eccCCcccC--CCCC
Confidence 36777 7888888888888888888 8885 8888 6776
No 143
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=79.72 E-value=0.99 Score=47.25 Aligned_cols=32 Identities=28% Similarity=0.858 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcCC
Q psy620 342 DVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCGR 381 (1290)
Q Consensus 342 d~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce~ 381 (1290)
..|. .+|.++|.|+.- .+|.|++||+| ..|+.
T Consensus 149 ~~C~--~~C~ngG~Cv~P----~~C~C~~Gw~G--~~C~~ 180 (188)
T 2ygo_A 149 AECP--GGCRNGGFCNER----RICECPDGFHG--PHCEG 180 (188)
T ss_dssp CCCT--TCCCTTCEECTT----SCEECCTTCBT--TTTCB
T ss_pred CccC--CCCCCCCEeCCC----CcccCcCCCCC--CCCcC
Confidence 4576 689999999753 49999999999 89974
No 144
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.86 E-value=0.84 Score=53.68 Aligned_cols=41 Identities=27% Similarity=0.872 Sum_probs=35.1
Q ss_pred CCC-CCCCCCCCCCCCCCeeccCCCCcccccCCC-CCCCCCCCcee
Q psy620 142 HCK-PGVTCNMRPCFQGVQCFDTVEGYTCGPCPS-GYTGDGERCQR 185 (1290)
Q Consensus 142 ~Ce-dideC~~~pC~~gg~C~n~~g~y~C~~C~~-Gy~Gdg~~C~~ 185 (1290)
.|+ ..+.|..+||.++++|+...++|.| .|+. ||.|. .|+.
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C-~C~~~~~~G~--~C~~ 222 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSC-DCSMTSFSGP--LCND 222 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSSEEE-ECTTTSEEST--TSCE
T ss_pred CCCCCCCCcccccCCCCCEecCCCCCceE-eccCCcccCC--CCCC
Confidence 354 3568999999999999999999999 9996 99998 8875
No 145
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=73.40 E-value=1.1 Score=51.28 Aligned_cols=33 Identities=30% Similarity=0.677 Sum_probs=19.0
Q ss_pred CCccCCCCCCCCCcccccCCCCeecccCCCCCccCC
Q psy620 236 IDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGST 271 (1290)
Q Consensus 236 ideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~ 271 (1290)
++||.....|. +.|+++.++|+|. |++||....
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~-C~~g~~l~~ 33 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCW-CEAGYELRP 33 (349)
T ss_dssp --------CCS--SEECCC---CCEE-CCTTEEECT
T ss_pred CcccCCCCCCc--CeeecCCCCeEEE-CCCCccCCC
Confidence 46786345787 5899999999999 999998654
No 146
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=72.10 E-value=2 Score=47.82 Aligned_cols=45 Identities=29% Similarity=0.688 Sum_probs=34.5
Q ss_pred CCccCCC--CCCCCCcccccCCCCeecccCCCCCccCCCCccccccccccCCCCcccCCCCC
Q psy620 236 IDECDLA--EPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDIDECA 295 (1290)
Q Consensus 236 ideC~~~--~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~dideC~ 295 (1290)
.+||... ..|. ..|.++.++|+|. |.+||.... +...|...++|.
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~-C~~G~~l~~------------d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCS-CAQGYRLGE------------DHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCB-CCTTEEECT------------TSSCEEECSTTC
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEec-CCCCcccCC------------CCCccccccccc
Confidence 5788643 4676 6799999999999 999998765 457787777765
No 147
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=72.01 E-value=1.7 Score=50.66 Aligned_cols=55 Identities=22% Similarity=0.458 Sum_probs=29.9
Q ss_pred CCCCCe-ee-cCCCCcccccCCCCcccCCCCCCC-CCCCCCCCCCCCCeeccCCCCcccccCC
Q psy620 114 CFPGVE-CR-DTREGPRCMRCPDGYVGDGIHCKP-GVTCNMRPCFQGVQCFDTVEGYTCGPCP 173 (1290)
Q Consensus 114 C~~gg~-C~-~~~g~y~C~~C~~Gy~Gdg~~Ced-ideC~~~pC~~gg~C~n~~g~y~C~~C~ 173 (1290)
|..++. |. ....++.| .|+++|+| ..|+. .......||.. ++|.+..+-..| .|.
T Consensus 257 Cngh~s~c~~~~~~~~~C-~C~~nt~G--~~Ce~C~~gy~~~p~~~-g~~~~~~~C~~C-~Cn 314 (375)
T 4aqt_A 257 CNGHASECVKNEFDKLMC-NCKHNTYG--VDCEKCLPFFNDRPWRR-ATAESASECLPC-DCN 314 (375)
T ss_dssp CTTSCSCEEECTTSCEEE-CCCTTEES--TTSCEECTTCCSSCCCC-CCSSCCCCCCCC-CGG
T ss_pred CCCCCcccCCCCCCCeee-eCcCCCcC--CCcccCCCCCcCCCCCC-CccCCCCCCCCC-cCc
Confidence 655554 33 33466789 99999999 78871 11122234432 344443333445 554
No 148
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=69.51 E-value=1.9 Score=43.40 Aligned_cols=37 Identities=35% Similarity=0.795 Sum_probs=28.7
Q ss_pred ccccCCccCCC--CCCCCCcccccCCCCeecccCCCCCccCC
Q psy620 232 RCHDIDECDLA--EPCDPRVQCTNLFPGYRCDPCPAGFTGST 271 (1290)
Q Consensus 232 ~C~dideC~~~--~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~ 271 (1290)
.+.+++||... .+|. +.|.+..++|+|. |++||++..
T Consensus 113 ~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~-C~~Gy~l~~ 151 (159)
T 1nzi_A 113 VATDINECTDFVDVPCS--HFCNNFIGGYFCS-CPPEYFLHD 151 (159)
T ss_dssp EEEECCTTTC-CCCCSS--SEEEEETTEEEEE-CCTTCEECT
T ss_pred ecccCcccCCCCCCCCC--CcccCcCCCEEEe-cCCCcEECC
Confidence 35678889742 3575 5799999999999 999999654
No 149
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=68.99 E-value=2.5 Score=39.01 Aligned_cols=67 Identities=21% Similarity=0.467 Sum_probs=51.7
Q ss_pred CCCCCCCcccccC-CCCeecccCCCCCccCCCCccccccccccCCCCcccCC--CCCCCCCCCCCCCCccccCC-CCcEE
Q psy620 242 AEPCDPRVQCTNL-FPGYRCDPCPAGFTGSTGVQGVGLEHAVRFRQTCVDID--ECADGRNGGCDSNSMCTNTE-GSFTC 317 (1290)
Q Consensus 242 ~~pC~~~g~C~n~-~gsy~C~~C~~Gy~G~~Ce~~~~~~~~~~~~~~C~did--eC~~~~~g~C~~~g~C~n~~-gsy~C 317 (1290)
...|..++.|... .+.-.|. |..+|.-.. ..|+.-+ .|..+ +|.|..++.|.... ..-.|
T Consensus 9 ~tkcp~NA~Cyr~~dg~EecR-Cllnykk~~--------------~kCV~~~~~~C~~N-NGGCd~nA~C~~~~~~kIvC 72 (95)
T 1b9w_A 9 DTNVPENAACYRYLDGTEEWR-CLLYFKEDA--------------GKCVPAPNMTCKDK-NGGCAPEAECKMNDKNEIVC 72 (95)
T ss_dssp SCCCCTTEEEEECTTSCEEEE-ECTTEEEET--------------TEEEECTTCCTTTG-GGGSCTTSEEEECTTSCEEE
T ss_pred cCCCCCCcCeEEEcCCCEEEE-EECCeEecC--------------CEEEcCCCCCcccc-CCCcCCCcceeecCCCcEEE
Confidence 4467788999874 4677898 999997543 4575433 79988 89999999998877 56789
Q ss_pred cCcCcCCcc
Q psy620 318 TSLCRNSYM 326 (1290)
Q Consensus 318 ~~~C~~Gy~ 326 (1290)
.|...+.
T Consensus 73 --~C~~~~~ 79 (95)
T 1b9w_A 73 --KCTKEGS 79 (95)
T ss_dssp --ECCSTTE
T ss_pred --ECCCCCC
Confidence 8988763
No 150
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=68.84 E-value=2.1 Score=50.30 Aligned_cols=37 Identities=19% Similarity=0.402 Sum_probs=17.6
Q ss_pred cCCCCcccccCCCCcccCCC---CCCCCCCCCCCCCCCCC
Q psy620 122 DTREGPRCMRCPDGYVGDGI---HCKPGVTCNMRPCFQGV 158 (1290)
Q Consensus 122 ~~~g~y~C~~C~~Gy~Gdg~---~CedideC~~~pC~~gg 158 (1290)
....+..|++|.+||.|+.. .=.....|...+|..++
T Consensus 292 hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs 331 (403)
T 2y38_A 292 HNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHA 331 (403)
T ss_dssp TTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSC
T ss_pred CcCcCCCCCCCCccccCCcccccccCCCccccccccCCCC
Confidence 33444566666666665310 00012356665665544
No 151
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=64.29 E-value=2.6 Score=56.79 Aligned_cols=37 Identities=24% Similarity=0.686 Sum_probs=32.0
Q ss_pred CCCCCCCCCCCCCCeeecCCCCcccccCC-CCcccCCCCCCC
Q psy620 105 KPTCATDNPCFPGVECRDTREGPRCMRCP-DGYVGDGIHCKP 145 (1290)
Q Consensus 105 ~d~C~~~~pC~~gg~C~~~~g~y~C~~C~-~Gy~Gdg~~Ced 145 (1290)
.+.|. ++||.|+|+|.....+|.| .|+ +||+| +.|+.
T Consensus 1017 ~~~C~-~~pC~ngG~C~~~~~~~~C-~C~~~g~~G--~~C~~ 1054 (1245)
T 3qcw_A 1017 STTCQ-EDSCSNQGVCLQQWDGFSC-DCSMTSFSG--PLCND 1054 (1245)
T ss_dssp CCCCC-TTSSSSSCEEEEETTEEEE-ECTTSSCBS--TTSCB
T ss_pred cCceE-CCcCCCCCEeCCCCCCCEE-ECCCCCCCC--CCccC
Confidence 46888 8999999999998889999 999 69999 78873
No 152
>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=63.87 E-value=0.42 Score=42.72 Aligned_cols=38 Identities=24% Similarity=0.528 Sum_probs=28.1
Q ss_pred eeeeccccCCCCCCCCCCCCCCCccC-CCCCCCCCCCCCCCCCCCCc
Q psy620 441 FCLTVLGINNHADNCPRNANPDQRDS-DHDGIGDACDNCPRVSNPEQ 486 (1290)
Q Consensus 441 ~C~~~~~~~~~~~~C~~~~~~~~~c~-~~~~~G~~C~~Cp~~~~~~~ 486 (1290)
.|...+...+++.+|+ |+ .+.+||.+|+.||...+.+|
T Consensus 18 ~C~~p~~~~~tk~~CC--------Cs~~G~aWG~~Ce~CP~~gs~ef 56 (74)
T 1apj_A 18 KCSSPKSRNHSKQECC--------CALKGEGWGDPCELCPTEPDEAF 56 (74)
T ss_dssp CEEEEEEEEEEHHHHH--------TTSCCSEETTTTEECCCTTSHHH
T ss_pred cccCCCCCCccccccc--------cCCCCCccCCCcccCCCCChHHH
Confidence 4555555555666666 66 59999999999999977666
No 153
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=63.00 E-value=3.6 Score=46.53 Aligned_cols=41 Identities=22% Similarity=0.632 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCCCCCccccCCC--CcEEcCcCcCCccccCCCCCCCC
Q psy620 291 IDECADGRNGGCDSNSMCTNTEG--SFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 291 ideC~~~~~g~C~~~g~C~n~~g--sy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
.++|... ++.|. ..|...++ +|+| .|+.||.+...+++|.+
T Consensus 267 ~n~C~~~-ng~Cs--~~C~~~~~~~~~~C--~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 267 TNPCGID-NGGCS--HLCLMSPVKPFYQC--ACPTGVKLLENGKTCKD 309 (318)
T ss_dssp CCTTTTT-GGGCS--SEEEECSSTTSEEE--ECSTTCCBCTTSSCBCC
T ss_pred ccccccC-CCCcc--eEEecCCCCCCeEE--ECCCCCEECCCCCCCCC
Confidence 5788876 77897 58998776 7999 99999999888888876
No 154
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=62.74 E-value=2.9 Score=56.30 Aligned_cols=40 Identities=28% Similarity=0.929 Sum_probs=34.8
Q ss_pred CC-CCCCCCCCCCCCCCeeccCCCCcccccCC-CCCCCCCCCcee
Q psy620 143 CK-PGVTCNMRPCFQGVQCFDTVEGYTCGPCP-SGYTGDGERCQR 185 (1290)
Q Consensus 143 Ce-dideC~~~pC~~gg~C~n~~g~y~C~~C~-~Gy~Gdg~~C~~ 185 (1290)
|. ..+.|..+||.++++|+....+|.| .|+ +||+|. .|+.
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C-~C~~~g~~G~--~C~~ 1054 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSC-DCSMTSFSGP--LCND 1054 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEE-ECTTSSCBST--TSCB
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEE-ECCCCCCCCC--CccC
Confidence 55 3468999999999999999999999 999 699998 8764
No 155
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=57.86 E-value=3.4 Score=51.50 Aligned_cols=42 Identities=31% Similarity=0.786 Sum_probs=36.0
Q ss_pred cCCCCCCCCCCCCCCCCccccCC-CCcEEcCcCcCCccccCCCCCCCC
Q psy620 290 DIDECADGRNGGCDSNSMCTNTE-GSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 290 dideC~~~~~g~C~~~g~C~n~~-gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
.+++|+.. ++.|. ..|++.+ ++|+| .|++||.+...+++|..
T Consensus 264 ~~n~C~~~-ng~C~--~~C~~~~~~~~~C--~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASS-NGHCS--HLCLAVPVGGFVC--GCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTT-GGGCS--SEEEEETTTEEEE--ECSTTCEECTTSSCEEC
T ss_pred cceEeccC-CCCcc--hhhhcCCCCCeeE--EcCCCcEecccCCcCcc
Confidence 57899887 77897 6899998 89999 99999998877878865
No 156
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=56.91 E-value=6 Score=36.54 Aligned_cols=69 Identities=20% Similarity=0.416 Sum_probs=53.2
Q ss_pred CCCCCCCCCCCCCeeecCC-CCcccccCCCCcccCCCCCCCC--CCCCCC--CCCCCCeeccCC-CCcccccCCCCCC
Q psy620 106 PTCATDNPCFPGVECRDTR-EGPRCMRCPDGYVGDGIHCKPG--VTCNMR--PCFQGVQCFDTV-EGYTCGPCPSGYT 177 (1290)
Q Consensus 106 d~C~~~~pC~~gg~C~~~~-g~y~C~~C~~Gy~Gdg~~Cedi--deC~~~--pC~~gg~C~n~~-g~y~C~~C~~Gy~ 177 (1290)
.-|. ...|..++.|.... +.-.| +|..+|.-++..|... ..|..+ -|...+.|.... ....| .|...+.
T Consensus 5 h~C~-~tkcp~NA~Cyr~~dg~Eec-RCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC-~C~~~~~ 79 (95)
T 1b9w_A 5 HRCI-DTNVPENAACYRYLDGTEEW-RCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVC-KCTKEGS 79 (95)
T ss_dssp GSCS-SCCCCTTEEEEECTTSCEEE-EECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEE-ECCSTTE
T ss_pred cccc-cCCCCCCcCeEEEcCCCEEE-EEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEE-ECCCCCC
Confidence 3465 55788899998754 67899 9999999666789833 378774 489999999777 67889 8887753
No 157
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.75 E-value=5.1 Score=44.94 Aligned_cols=42 Identities=26% Similarity=0.717 Sum_probs=31.9
Q ss_pred cCCCCCCC--CCCCCCCCCccccCC------CCcEEcCcCcCCccccCCCCCCC
Q psy620 290 DIDECADG--RNGGCDSNSMCTNTE------GSFTCTSLCRNSYMVRNVSVGCQ 335 (1290)
Q Consensus 290 dideC~~~--~~g~C~~~g~C~n~~------gsy~C~~~C~~Gy~g~~~g~~C~ 335 (1290)
..++|... +++.|. ..|++.+ ++|+| .|+.||++...+++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C--~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTC--ACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEE--ECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcC--cccCCCccccCCCCCeEe--eCCCCCEECCCCCccC
Confidence 45778753 135586 5899875 58999 9999999888888875
No 158
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=54.34 E-value=6.9 Score=45.91 Aligned_cols=66 Identities=18% Similarity=0.419 Sum_probs=36.2
Q ss_pred cccCCCCcEEcCcCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC-eEeee---------------cCCceEEe-cCC
Q psy620 308 CTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNA-KCTRI---------------LGNHYACK-CDN 370 (1290)
Q Consensus 308 C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g-~C~~~---------------~~gsy~C~-C~~ 370 (1290)
|.....+..|+ +|.+||.+..-...=.. ..+.|. .-.|..++ .|... ..++.+|. |+.
T Consensus 290 C~hnT~G~~CE-rC~pGy~g~p~~~at~~---~~~~C~-pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~ 364 (403)
T 2y38_A 290 CQHNTCGGSCD-RCCPGFNQQPWKPATTD---SANECQ-SCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQH 364 (403)
T ss_dssp CCTTEESSSCC-EECTTCCSSCCCCCCSS---CCCCCC-CCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCS
T ss_pred CcCcCcCCCCC-CCCccccCCcccccccC---CCcccc-ccccCCCCcccccCcccccccccccccccCCCCCCCCCCcC
Confidence 44444456787 99999976421000000 012343 23365554 37421 13467996 999
Q ss_pred CcccCCCCcC
Q psy620 371 GWAGDGQFCG 380 (1290)
Q Consensus 371 Gy~GdG~~Ce 380 (1290)
+++| .+|+
T Consensus 365 nt~G--~~CE 372 (403)
T 2y38_A 365 HTTG--INCE 372 (403)
T ss_dssp SEES--TTSC
T ss_pred cCcC--CCCC
Confidence 9999 8886
No 159
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=53.12 E-value=3.6 Score=51.12 Aligned_cols=42 Identities=24% Similarity=0.636 Sum_probs=35.8
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCcEEcCcCcCCccccCCCCCCCC
Q psy620 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 290 dideC~~~~~g~C~~~g~C~n~~gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
..++|... ++.|. ..|.+++++|+| .|+.||.+...+++|..
T Consensus 577 ~~~~C~~~-ng~C~--~~C~~~~~~~~C--~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEE-NGGCS--HLCLYRPQGLRC--ACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSG-GGGCS--SEEEEETTEEEE--ECCTTCEECSSTTCEEC
T ss_pred ccccCCCC-CCChh--HhhccCCCCeEE--ECCCCCEECCCCCcCCC
Confidence 46889877 77897 689999999999 99999998888888864
No 160
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=32.48 E-value=11 Score=47.26 Aligned_cols=44 Identities=25% Similarity=0.758 Sum_probs=34.0
Q ss_pred cCcCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEeeecCCceEEecCCCcccCCCCcC
Q psy620 320 LCRNSYMVRNVSVGCQSQNFGADVCPDGTRCDRNAKCTRILGNHYACKCDNGWAGDGQFCG 380 (1290)
Q Consensus 320 ~C~~Gy~g~~~g~~C~~~~~~id~C~~~~~C~~~g~C~~~~~gsy~C~C~~Gy~GdG~~Ce 380 (1290)
.|.+||.|.+ |.. ...|. ..|..+|.|+.. +|+|.+||.| ..|.
T Consensus 521 ~C~~gw~g~d----c~i----~~~Cp--~~C~ghG~C~~G-----~C~Cd~G~~G--~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDN----VYI----GDGCL--DMCSGHGRCVQG-----SCVCDEQWGG--LYCD 564 (725)
T ss_dssp CTTCCEEEEE----EEE----ESCSS--GGGGGSEEEETT-----EEEECTTEES--TTSC
T ss_pred ccCCCccccc----ccc----cCCCC--cccCCCcEECCC-----CEeeCCCccC--CCcC
Confidence 5899998655 442 14465 479999999875 8999999999 7785
No 161
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=28.81 E-value=26 Score=43.32 Aligned_cols=42 Identities=21% Similarity=0.628 Sum_probs=33.7
Q ss_pred cCCCCCCCCCCCCCCCCccccCC--CCcEEcCcCcCCccccCCCCCCCC
Q psy620 290 DIDECADGRNGGCDSNSMCTNTE--GSFTCTSLCRNSYMVRNVSVGCQS 336 (1290)
Q Consensus 290 dideC~~~~~g~C~~~g~C~n~~--gsy~C~~~C~~Gy~g~~~g~~C~~ 336 (1290)
..++|... ++.|. ..|...+ .+|+| .|++||.+...+++|..
T Consensus 271 ~~n~C~~~-ng~Cs--~lCl~~~~~~~~~C--~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 271 ATNPCGID-NGGCS--HLCLMSPVKPFYQC--ACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCCTTTTT-GGGCS--SEEEECSSTTSEEE--ECCTTCCBCTTSSCBCS
T ss_pred ccccccCC-CCccc--ceEECCCCCCCceE--eCCchheecccCcccCC
Confidence 35788876 67786 6898876 47999 99999998887888875
No 162
>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=28.42 E-value=2.2 Score=38.17 Aligned_cols=22 Identities=32% Similarity=0.688 Sum_probs=19.0
Q ss_pred cCCCCCCCCCCCC--CCCCCCCCc
Q psy620 465 DSDHDGIGDACDN--CPRVSNPEQ 486 (1290)
Q Consensus 465 c~~~~~~G~~C~~--Cp~~~~~~~ 486 (1290)
|..+.+||..|+. ||...+.+|
T Consensus 37 C~~G~~WG~~ce~~~CP~~gt~~f 60 (75)
T 1ksq_A 37 CTSGAGWGDNCEIFPCPVLGTAEF 60 (75)
T ss_dssp HTCCSEEEETTEEEECCCSSSHHH
T ss_pred ccccCccCCCCCccCCCCCCHHHH
Confidence 7789999999997 999977666
No 163
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=28.33 E-value=19 Score=40.12 Aligned_cols=55 Identities=24% Similarity=0.508 Sum_probs=36.2
Q ss_pred CCCCCCeeecCCCCcccccCCCCcccCCCCCC-C-CC--------CCCCC----CCCCCCeeccCCCCcccccCCCCCCC
Q psy620 113 PCFPGVECRDTREGPRCMRCPDGYVGDGIHCK-P-GV--------TCNMR----PCFQGVQCFDTVEGYTCGPCPSGYTG 178 (1290)
Q Consensus 113 pC~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~Ce-d-id--------eC~~~----pC~~gg~C~n~~g~y~C~~C~~Gy~G 178 (1290)
+|..+|+|.- -.| .|.+||+| ..|+ . .. .|... .|..+|+|+-. +| .|..++.+
T Consensus 197 ~C~g~G~~~C----G~C-~C~~g~~G--~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C-~C~~~~~~ 264 (280)
T 2p26_A 197 LCHGKGFLEC----GIC-RCDTGYIG--KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QC-LCHTSDVP 264 (280)
T ss_dssp GGGGSEEEET----TEE-EECTTEES--TTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EE-EECCCSST
T ss_pred ccCCCCeECC----Cce-eCCCCCcC--CcceecCCccccccccccCCCCCCCCccCCCceEeCC----ee-ECcCCCCC
Confidence 3655556552 268 99999999 6776 1 11 58632 48888888754 68 88777654
Q ss_pred C
Q psy620 179 D 179 (1290)
Q Consensus 179 d 179 (1290)
.
T Consensus 265 ~ 265 (280)
T 2p26_A 265 G 265 (280)
T ss_dssp T
T ss_pred C
Confidence 3
No 164
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=26.95 E-value=35 Score=42.26 Aligned_cols=38 Identities=18% Similarity=0.591 Sum_probs=28.4
Q ss_pred CCCCCCC-CCCCCCCeEeeecCCceEEecCCCccc--CCCCcC
Q psy620 341 ADVCPDG-TRCDRNAKCTRILGNHYACKCDNGWAG--DGQFCG 380 (1290)
Q Consensus 341 id~C~~~-~~C~~~g~C~~~~~gsy~C~C~~Gy~G--dG~~Ce 380 (1290)
+++|... ..|++ .|.+...++|+|.|++||.. |+++|.
T Consensus 265 ~n~C~~~ng~C~~--~C~~~~~~~~~C~C~~g~~l~~d~~~C~ 305 (628)
T 4a0p_A 265 WNECASSNGHCSH--LCLAVPVGGFVCGCPAHYSLNADNRTCS 305 (628)
T ss_dssp CCTTTTTGGGCSS--EEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred ceEeccCCCCcch--hhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence 5778743 46865 79998448999999999975 556663
No 165
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=26.48 E-value=35 Score=38.01 Aligned_cols=56 Identities=27% Similarity=0.669 Sum_probs=34.8
Q ss_pred EEcCcCcCCccccCCCCCCCCCCCC----CCCCCC---CCCCCCCCeEeeecCCceEEecCCCcccC----CCCcC
Q psy620 316 TCTSLCRNSYMVRNVSVGCQSQNFG----ADVCPD---GTRCDRNAKCTRILGNHYACKCDNGWAGD----GQFCG 380 (1290)
Q Consensus 316 ~C~~~C~~Gy~g~~~g~~C~~~~~~----id~C~~---~~~C~~~g~C~~~~~gsy~C~C~~Gy~Gd----G~~Ce 380 (1290)
+| .|.+||+|..+. |...... ...|.. ...|+.+|+|+-. +|.|..+|.+. |+.|+
T Consensus 208 ~C--~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG-----~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 208 IC--RCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp EE--EECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT-----EEEECCCSSTTCEEESTTSC
T ss_pred ce--eCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceEeCC-----eeECcCCCCCCeeEeeEecc
Confidence 57 899999876543 3321000 015742 2469888999864 99998887542 36665
No 166
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=25.62 E-value=13 Score=46.34 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=35.9
Q ss_pred CCCCCCcCCCCccccCCccCCCCCCCCCcccccCCCCeecccCCCCCccCCCC
Q psy620 221 SCPEGTTGNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGV 273 (1290)
Q Consensus 221 ~C~~Gy~Gdg~~C~dideC~~~~pC~~~g~C~n~~gsy~C~~C~~Gy~G~~Ce 273 (1290)
.|.+||.| ..|.-...|. ..|..+|+|++. +|. |.+||+|..|+
T Consensus 521 ~C~~gw~g--~dc~i~~~Cp--~~C~ghG~C~~G----~C~-Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAI--DNVYIGDGCL--DMCSGHGRCVQG----SCV-CDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEE--EEEEEESCSS--GGGGGSEEEETT----EEE-ECTTEESTTSC
T ss_pred ccCCCccc--ccccccCCCC--cccCCCcEECCC----CEe-eCCCccCCCcC
Confidence 58899998 7776335673 589999999985 698 99999999975
No 167
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=24.00 E-value=26 Score=42.61 Aligned_cols=57 Identities=21% Similarity=0.437 Sum_probs=32.3
Q ss_pred CCCCCeeecCCCCcccccCCCCcccCCCCCCCCCCCCC------------CCCCCCCeeccCCCCcccccCCCCCCC
Q psy620 114 CFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNM------------RPCFQGVQCFDTVEGYTCGPCPSGYTG 178 (1290)
Q Consensus 114 C~~gg~C~~~~g~y~C~~C~~Gy~Gdg~~CedideC~~------------~pC~~gg~C~n~~g~y~C~~C~~Gy~G 178 (1290)
|...|.+.... -+| .|.+||...+..|+. |.. .+|..+.. ....|.|.| .|..||.-
T Consensus 252 C~~dG~w~~p~--G~C-~C~~G~e~~~~~C~a---C~~g~~k~~~~~~~C~~CP~~S~-s~~~Gs~~C-~C~ng~~r 320 (536)
T 3fl7_A 252 CAVDGEWLVPI--GQC-LCQAGYEKVEDACQA---CSPGFFKFEASESPCLECPEHTL-PSPEGATSC-ECEEGFFR 320 (536)
T ss_dssp ECTTSCBCCCB--CCC-EECTTEEEETTEEEE---CCTTEECCSCCSSCCEECCSSEE-CCCTTCSSC-EECTTCBC
T ss_pred EcCCCCEeccc--CcE-eccCccccCCceeee---cCCCCCcccCCCCccccCCCCCC-CCCCCccEE-EEeccccc
Confidence 44444454333 379 999999854456652 322 12322221 233578889 89988864
No 168
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=23.76 E-value=40 Score=35.71 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=28.6
Q ss_pred ccccccCccceEEEEeeeeccccceeeeecccCCCcccchh
Q psy620 28 DDLLDDGVINGLLLGVKQDIMGARYTLYMDCVDHGTVAMTQ 68 (1290)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~i~G~~~~ly~~C~~~~~~~~~~ 68 (1290)
...+.++.||++.+.+... .++||++|.......+..
T Consensus 121 ~v~l~dg~WH~l~l~V~~~----~v~L~vDC~~~~~~~l~~ 157 (209)
T 2erf_A 121 EALLATGQWKSITLFVQED----RAQLYIDCEKMENAELDV 157 (209)
T ss_dssp SCCCCSSSEEEEEEEEETT----EEEEEETTTEEEEEECSS
T ss_pred ccccCCCcEEEEEEEEECC----EEEEEEcCeEeEeEEccC
Confidence 3457899999999998775 689999998766554443
No 169
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=23.52 E-value=33 Score=38.14 Aligned_cols=36 Identities=28% Similarity=0.653 Sum_probs=24.9
Q ss_pred CCCCCCC-----CCCCCCeeccCC------CCcccccCCCCCC--CCCCCce
Q psy620 146 GVTCNMR-----PCFQGVQCFDTV------EGYTCGPCPSGYT--GDGERCQ 184 (1290)
Q Consensus 146 ideC~~~-----pC~~gg~C~n~~------g~y~C~~C~~Gy~--Gdg~~C~ 184 (1290)
.++|..+ .|. ..|.+.+ ++|+| .|+.||. .++++|.
T Consensus 267 ~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C-~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTC-ACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEE-ECCTTCEECTTSSCEE
T ss_pred cccccccccCCCCcC--cccCCCccccCCCCCeEe-eCCCCCEECCCCCccC
Confidence 4567654 354 3788764 58999 9999997 3455664
No 170
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=20.37 E-value=63 Score=35.27 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=28.7
Q ss_pred ccccccCccceEEEEeeeeccccceeeeecccCCCcccchh
Q psy620 28 DDLLDDGVINGLLLGVKQDIMGARYTLYMDCVDHGTVAMTQ 68 (1290)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~i~G~~~~ly~~C~~~~~~~~~~ 68 (1290)
...+.++.||++.+.|... .++||++|..........
T Consensus 131 ~~~L~Dg~WH~lalsV~~~----~VtLyvDC~~~~~~~l~~ 167 (251)
T 1za4_A 131 EALLATGQWKSITLFVQED----RAQLYIDCEKMENAELDV 167 (251)
T ss_dssp SCCCCSSSCEEEEEEEETT----EEEEEETTSCCEEEECSS
T ss_pred cccccCCCEEEEEEEEECC----EEEEEECCcccceeeccC
Confidence 3567899999999998765 689999999876554443
Done!