RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy620
(1290 letters)
>d1ux6a1 b.29.1.16 (A:937-1152) Thrombospondin C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 216
Score = 235 bits (600), Expect = 3e-71
Identities = 83/139 (59%), Positives = 106/139 (76%)
Query: 998 TDFRRYTTVILDPQGTSQIDPHWVIYNHGAEILQTMNSDPGLAIGQDKFSGVDFEGTFFV 1057
TDFRR+ + LDP+GTSQ DP+WV+ + G E++QT+NSDPGLA+G D+F+ VDF GTFF+
Sbjct: 1 TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNSDPGLAVGYDEFNAVDFSGTFFI 60
Query: 1058 DTDIDDDYAGFVFSYQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGT 1117
+T+ DDDYAGFVF YQSS +FYV+MWK+ +Q YW T P RA G+ +KVV S TGPG
Sbjct: 61 NTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVKSTTGPGE 120
Query: 1118 MLRNSLWHTGDTENQCDLA 1136
LRN+LWHTG+T Q
Sbjct: 121 HLRNALWHTGNTPGQVRTL 139
Score = 97.2 bits (242), Expect = 3e-23
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1236 YQSSQKFYVMMWKKNSQVYWQTTPFRAVAEPGIQLKVVDSATGPGTMLRNSLWHT 1290
YQSS +FYV+MWK+ +Q YW T P RA G+ +KVV S TGPG LRN+LWHT
Sbjct: 75 YQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVKSTTGPGEHLRNALWHT 129
>d1ux6a2 g.75.1.1 (A:813-936) Thrombospondin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 124
Score = 90.7 bits (224), Expect = 5e-22
Identities = 68/120 (56%), Positives = 84/120 (70%)
Query: 876 CDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGKGD 935
DNCP NP+Q DS+S+ IGD CD+ D D DG + +DNCP V N NQ D+D+DGKGD
Sbjct: 3 ADNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD 62
Query: 936 ECDPDLDGDGISNDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDVSDVCPNNSLV 995
CD D D DGI +D+DNCRL+ NP+Q DSDGDG G+ C DFD D PD+ D+CP N +
Sbjct: 63 ACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDI 122
Score = 76.5 bits (187), Expect = 5e-17
Identities = 58/139 (41%), Positives = 72/139 (51%), Gaps = 27/139 (19%)
Query: 817 CDNCPTVPNVDQTDTDNDGTGDACDNDMD--NDGINNHADNCPRNANPDQRDSDHDGIGD 874
DNCP N DQ D+D+D GD CDN+ D DG N+ DNCP N +Q D D DG GD
Sbjct: 3 ADNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD 62
Query: 875 ACDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGKG 934
ACD+ D+DG+PD DNC V NP+Q D+D DG+G
Sbjct: 63 ACDHDD-------------------------DNDGIPDDKDNCRLVPNPDQKDSDGDGRG 97
Query: 935 DECDPDLDGDGISNDEDNC 953
D C D D D + + +D C
Sbjct: 98 DACKDDFDHDSVPDIDDIC 116
Score = 69.5 bits (169), Expect = 1e-14
Identities = 59/146 (40%), Positives = 74/146 (50%), Gaps = 27/146 (18%)
Query: 721 DNCVHIPNSGQEDADEDNIGDICDD--DADNDGILNPSDNCPYVHNPDQLDSDQDGMRDR 778
DNC N Q D+D D IGD CD+ D D DG N DNCPYV N +Q D D+DG
Sbjct: 4 DNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGK--- 60
Query: 779 RLGDACDNCPTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQTDTDNDGTGD 838
GDACD+ ++ + D DNC VPN DQ D+D DG GD
Sbjct: 61 --GDACDHDDDND--------------------GIPDDKDNCRLVPNPDQKDSDGDGRGD 98
Query: 839 ACDNDMDNDGINNHADNCPRNANPDQ 864
AC +D D+D + + D CP N + +
Sbjct: 99 ACKDDFDHDSVPDIDDICPENVDISE 124
Score = 68.0 bits (165), Expect = 5e-14
Identities = 64/146 (43%), Positives = 75/146 (51%), Gaps = 35/146 (23%)
Query: 790 DNCPYVHNPDQLDSDQDGMRDRR----------LGDACDNCPTVPNVDQTDTDNDGTGDA 839
DNCP HNPDQLDSD D + D + DNCP VPN +Q D D DG GDA
Sbjct: 4 DNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA 63
Query: 840 CDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTDSNSNHIGDVC 899
CD+D DNDGI + DNC NPDQ+DSD DG GDAC +
Sbjct: 64 CDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKD--------------------- 102
Query: 900 DSGVDTDHDGVPDPMDNCPKVANPNQ 925
D DHD VPD D CP+ + ++
Sbjct: 103 ----DFDHDSVPDIDDICPENVDISE 124
Score = 52.6 bits (125), Expect = 1e-08
Identities = 47/124 (37%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 417 ADNCPRNANPDQR---MCGHSLRIHIVFCLTVLGINNHADNCPRNANPDQRDSDHDGIGD 473
ADNCP NPDQ + G N+ DNCP N +Q D D DG GD
Sbjct: 3 ADNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD 62
Query: 474 AC-------------DNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVA 520
AC DNC V NP+Q DS+ + GD C D DHD VPD D CP+
Sbjct: 63 ACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKD--DFDHDSVPDIDDICPENV 120
Query: 521 NPNQ 524
+ ++
Sbjct: 121 DISE 124
Score = 51.0 bits (121), Expect = 3e-08
Identities = 32/66 (48%), Positives = 40/66 (60%)
Query: 475 CDNCPRVSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGKSI 534
DNCP NP+Q DS+S+ IGD CD+ D D DG + +DNCP V N NQ D+D+DGK
Sbjct: 3 ADNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD 62
Query: 535 PWAMVF 540
Sbjct: 63 ACDHDD 68
Score = 37.9 bits (87), Expect = 0.001
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 25/110 (22%)
Query: 719 DEDNCVHIPNSGQEDADEDNIGDICDDDADNDGILNPSDNCPYVHNPDQLDSDQDGMRDR 778
+ DNC ++PN+ Q D D+D GD CD D DNDGI + DNC V NPDQ DSD DG
Sbjct: 40 NLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDG---- 95
Query: 779 RLGDACDNCPTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQ 828
GDAC + D D D + D D CP ++ +
Sbjct: 96 -RGDACKD---------------DFDHDS-----VPDIDDICPENVDISE 124
Score = 36.4 bits (83), Expect = 0.004
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 718 IDEDNCVHIPNSGQEDADEDNIGDICDDDADNDGILNPSDNCP 760
D+DNC +PN Q+D+D D GD C DD D+D + + D CP
Sbjct: 75 DDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICP 117
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 37.4 bits (87), Expect = 3e-04
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 287 TCVDIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYM 326
+ VD+DEC + + C NT+GS+ C C Y+
Sbjct: 1 SAVDMDECKEP---DVCKHGQCINTDGSYRCE--CPFGYI 35
Score = 32.0 bits (73), Expect = 0.024
Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
C + QC +T Y C CP GY G C
Sbjct: 8 CKEPDVCKHGQCINTDGSYRCE-CPFGYILAGNECV 42
Score = 30.1 bits (68), Expect = 0.12
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 233 CHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGS 270
D+DEC QC N YRC+ CP G+ +
Sbjct: 2 AVDMDECKEP-DVCKHGQCINTDGSYRCE-CPFGYILA 37
Score = 27.4 bits (61), Expect = 0.93
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 108 CATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHC 143
C + C G +C +T RC CP GY+ G C
Sbjct: 8 CKEPDVCKHG-QCINTDGSYRC-ECPFGYILAGNEC 41
Score = 27.4 bits (61), Expect = 0.93
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 590 CATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHC 625
C + C G +C +T RC CP GY+ G C
Sbjct: 8 CKEPDVCKHG-QCINTDGSYRC-ECPFGYILAGNEC 41
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 36.9 bits (85), Expect = 6e-04
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 289 VDIDECADGRNGGCDSNS-----MCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQ 337
VD+DECA G + +C N G + C+ CR Y ++ CQ++
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCS--CRPGYELQEDRHSCQAE 53
Score = 27.2 bits (60), Expect = 1.8
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 8/41 (19%)
Query: 235 DIDEC-------DLAEPCDPRVQCTNLFPGYRCDPCPAGFT 268
D+DEC + + C N GY C C G+
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCS-CRPGYE 42
Score = 24.9 bits (54), Expect = 9.8
Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 1/32 (3%)
Query: 1131 NQCDLAEPCDPRVQCTNLFPGYRCDPCPAGFT 1162
+ + C N GY C C G+
Sbjct: 12 KSGEEDPQPQCQHLCHNYVGGYFCS-CRPGYE 42
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 36.3 bits (84), Expect = 7e-04
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335
DIDEC + G C C NT GSF C C Y + + C
Sbjct: 2 DIDECQEL-PGLC-QGGKCINTFGSFQCR--CPTGYYLNEDTRVCD 43
Score = 29.4 bits (66), Expect = 0.19
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFT 268
DIDEC +C N F ++C CP G+
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCR-CPTGYY 34
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 35.6 bits (82), Expect = 0.001
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGC 334
DIDEC C +C NTEGS+ C C + + C
Sbjct: 1 DIDECQRD-PLLC-RGGVCHNTEGSYRCE--CPPGHQLSPNISAC 41
Score = 30.6 bits (69), Expect = 0.076
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFT 268
DIDEC C N YRC+ CP G
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCE-CPPGHQ 33
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 34.9 bits (80), Expect = 0.003
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 291 IDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335
+DEC + C N G + C CR Y++ C
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYC--SCRVGYILHQNKHTCS 43
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 33.9 bits (78), Expect = 0.005
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 235 DIDECDLAE-PCDPRVQCTNLFPGYRCDPCPAGFTGST 271
D+DEC L PC+ +C N + C C G+TG
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQ-CLQGYTGPR 38
Score = 32.0 bits (73), Expect = 0.024
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCT 318
D+DEC+ G N C+ C NT GSF C
Sbjct: 2 DVDECSLGANP-CEHAGKCINTLGSFECQ 29
Score = 30.1 bits (68), Expect = 0.11
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 148 TCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
+ PC +C +T+ + C C GYTG RC+
Sbjct: 7 SLGANPCEHAGKCINTLGSFECQ-CLQGYTGP--RCE 40
Score = 27.4 bits (61), Expect = 1.1
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1131 NQCDLAE-PCDPRVQCTNLFPGYRCDPCPAGFTGST 1165
++C L PC+ +C N + C C G+TG
Sbjct: 4 DECSLGANPCEHAGKCINTLGSFECQ-CLQGYTGPR 38
Score = 25.5 bits (56), Expect = 5.8
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 112 NPCFPGVECRDTREGPRCMRCPDGYVGD 139
NPC +C +T C +C GY G
Sbjct: 11 NPCEHAGKCINTLGSFEC-QCLQGYTGP 37
Score = 25.5 bits (56), Expect = 5.8
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 594 NPCFPGVECRDTREGPRCMRCPDGYVGD 621
NPC +C +T C +C GY G
Sbjct: 11 NPCEHAGKCINTLGSFEC-QCLQGYTGP 37
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 33.6 bits (77), Expect = 0.006
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSY 325
DIDEC C C NT G F C C Y
Sbjct: 2 DIDECRIS-PDLC-GRGQCVNTPGDFECK--CDEGY 33
Score = 31.7 bits (72), Expect = 0.033
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGS 270
DIDEC ++ R QC N + C C G+
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECK-CDEGYESG 36
Score = 24.8 bits (54), Expect = 9.4
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1131 NQCDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGS 1164
++C ++ R QC N + C C G+
Sbjct: 4 DECRISPDLCGRGQCVNTPGDFECK-CDEGYESG 36
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 33.7 bits (77), Expect = 0.006
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 291 IDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQ 337
IDEC + C N G F C+ CR Y++ C Q
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCS--CRAGYVLHRNKRTCSEQ 45
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 33.3 bits (76), Expect = 0.009
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Query: 292 DECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGC 334
+EC D + C C N G + C C Y + + C
Sbjct: 1 NECTDFVDVPCSHF--CNNFIGGYFC--SCPPEYFLHDDMKNC 39
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 32.9 bits (75), Expect = 0.011
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 107 TCATD-NPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKP 145
TCA + + C ECRD G C C Y G+G C
Sbjct: 1 TCANNRHQCSVHAECRDYATGFCCR-CVANYTGNGRQCVA 39
Score = 32.9 bits (75), Expect = 0.011
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 589 TCATD-NPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKP 627
TCA + + C ECRD G C C Y G+G C
Sbjct: 1 TCANNRHQCSVHAECRDYATGFCCR-CVANYTGNGRQCVA 39
Score = 32.5 bits (74), Expect = 0.018
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 344 CPDGT-RCDRNAKCTRILGNHYACKCDNGWAGDGQFC 379
C + +C +A+C + C+C + G+G+ C
Sbjct: 2 CANNRHQCSVHAECRDYATG-FCCRCVANYTGNGRQC 37
Score = 32.1 bits (73), Expect = 0.020
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 294 CADGRNGGCDSNSMCTNTEGSFTCTSLCRNSY 325
CA+ R+ C ++ C + F C C +Y
Sbjct: 2 CANNRHQ-CSVHAECRDYATGFCCR--CVANY 30
Score = 30.6 bits (69), Expect = 0.072
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 148 TC--NMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERC 183
TC N C +C D G+ C C + YTG+G +C
Sbjct: 1 TCANNRHQCSVHAECRDYATGFCC-RCVANYTGNGRQC 37
Score = 26.3 bits (58), Expect = 2.6
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 244 PCDPRVQCTNLFPGYRCDPCPAGFTG 269
C +C + G+ C C A +TG
Sbjct: 8 QCSVHAECRDYATGFCCR-CVANYTG 32
Score = 26.3 bits (58), Expect = 2.6
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 1138 PCDPRVQCTNLFPGYRCDPCPAGFTG 1163
C +C + G+ C C A +TG
Sbjct: 8 QCSVHAECRDYATGFCCR-CVANYTG 32
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 32.4 bits (74), Expect = 0.019
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 291 IDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335
IDEC D C C N EG + C C + + + C+
Sbjct: 1 IDECQD--PDTCSQL--CVNLEGGYKCQ--CEEGFQLDPHTKACK 39
Score = 26.6 bits (59), Expect = 1.8
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 236 IDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFT 268
IDEC + C C NL GY+C C GF
Sbjct: 1 IDECQDPDTCSQL--CVNLEGGYKCQ-CEEGFQ 30
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 32.0 bits (73), Expect = 0.019
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
C PC +C D + + C CP+G+TG CQ
Sbjct: 3 CASSPCLHNGRCLDKINEFQCE-CPTGFTGH--LCQ 35
Score = 28.1 bits (63), Expect = 0.55
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 237 DECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 269
DEC + PC +C + ++C+ CP GFTG
Sbjct: 1 DECA-SSPCLHNGRCLDKINEFQCE-CPTGFTG 31
Score = 25.8 bits (57), Expect = 3.4
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 1131 NQCDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 1163
++C + PC +C + ++C+ CP GFTG
Sbjct: 1 DECA-SSPCLHNGRCLDKINEFQCE-CPTGFTG 31
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 31.9 bits (73), Expect = 0.022
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 269
D D+C+ + PC C + Y C CP GF G
Sbjct: 2 DGDQCE-SNPCLNGGSCKDDINSYECW-CPFGFEG 34
Score = 31.9 bits (73), Expect = 0.027
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
C PC G C D + Y C CP G+ G C+
Sbjct: 6 CESNPCLNGGSCKDDINSYECW-CPFGFEGK--NCE 38
Score = 26.2 bits (58), Expect = 3.0
Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 1138 PCDPRVQCTNLFPGYRCDPCPAGFTG 1163
PC C + Y C CP GF G
Sbjct: 10 PCLNGGSCKDDINSYECW-CPFGFEG 34
Score = 25.4 bits (56), Expect = 4.6
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 112 NPCFPGVECRDTREGPRCMRCPDGYVGD 139
NPC G C+D C CP G+ G
Sbjct: 9 NPCLNGGSCKDDINSYEC-WCPFGFEGK 35
Score = 25.4 bits (56), Expect = 4.6
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 594 NPCFPGVECRDTREGPRCMRCPDGYVGD 621
NPC G C+D C CP G+ G
Sbjct: 9 NPCLNGGSCKDDINSYEC-WCPFGFEGK 35
Score = 25.4 bits (56), Expect = 4.8
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 289 VDIDECADGRNGGCDSNSMCTNTEGSFTCT 318
VD D+C C + C + S+ C
Sbjct: 1 VDGDQCESNP---CLNGGSCKDDINSYECW 27
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 32.0 bits (73), Expect = 0.024
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
C PC G C D ++ Y C C + G C+
Sbjct: 5 CASSPCQNGGSCKDQLQSYICF-CLPAFEGR--NCE 37
Score = 31.6 bits (72), Expect = 0.028
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 269
D D+C + PC C + Y C C F G
Sbjct: 1 DGDQCA-SSPCQNGGSCKDQLQSYICF-CLPAFEG 33
Score = 25.8 bits (57), Expect = 3.9
Identities = 8/26 (30%), Positives = 9/26 (34%), Gaps = 1/26 (3%)
Query: 1138 PCDPRVQCTNLFPGYRCDPCPAGFTG 1163
PC C + Y C C F G
Sbjct: 9 PCQNGGSCKDQLQSYICF-CLPAFEG 33
Score = 24.7 bits (54), Expect = 8.0
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 112 NPCFPGVECRDTREGPRCMRCPDGYVGD 139
+PC G C+D + C C + G
Sbjct: 8 SPCQNGGSCKDQLQSYIC-FCLPAFEGR 34
Score = 24.7 bits (54), Expect = 8.0
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 594 NPCFPGVECRDTREGPRCMRCPDGYVGD 621
+PC G C+D + C C + G
Sbjct: 8 SPCQNGGSCKDQLQSYIC-FCLPAFEGR 34
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 31.7 bits (72), Expect = 0.026
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCT 318
DIDEC + G C C N G+F C
Sbjct: 1 DIDECEN--GGFCSGV--CHNLPGTFECI 25
Score = 30.1 bits (68), Expect = 0.11
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGS 270
DIDEC+ C C NL + C C +
Sbjct: 1 DIDECENGGFCSGV--CHNLPGTFECI-CGPDSALA 33
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 31.8 bits (72), Expect = 0.029
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 290 DIDECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQ 335
D++EC D + C NT GS+ C C + + VGC
Sbjct: 2 DVNECLDP-TTCI--SGNCVNTPGSYICD--CPPDFELNPTRVGCV 42
Score = 26.0 bits (57), Expect = 3.8
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 235 DIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGS 270
D++EC C C N Y CD CP F +
Sbjct: 2 DVNECLDPTTC-ISGNCVNTPGSYICD-CPPDFELN 35
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 31.6 bits (72), Expect = 0.032
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGD 179
C PC C D + + C C GY G
Sbjct: 4 CVSNPCQNDATCLDQIGEFQCI-CMPGYEGV 33
Score = 30.4 bits (69), Expect = 0.089
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 236 IDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGST 271
++EC + PC C + ++C C G+ G
Sbjct: 1 VNECV-SNPCQNDATCLDQIGEFQCI-CMPGYEGVH 34
Score = 26.2 bits (58), Expect = 2.7
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1131 NQCDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGST 1165
N+C + PC C + ++C C G+ G
Sbjct: 2 NECV-SNPCQNDATCLDQIGEFQCI-CMPGYEGVH 34
Score = 25.0 bits (55), Expect = 7.4
Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 112 NPCFPGVECRDTREGPRCMRCPDGYVGD 139
NPC C D +C C GY G
Sbjct: 7 NPCQNDATCLDQIGEFQC-ICMPGYEGV 33
Score = 25.0 bits (55), Expect = 7.4
Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 594 NPCFPGVECRDTREGPRCMRCPDGYVGD 621
NPC C D +C C GY G
Sbjct: 7 NPCQNDATCLDQIGEFQC-ICMPGYEGV 33
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 31.7 bits (72), Expect = 0.033
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 148 TCNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQRI 186
+C C + +C +T+ YTC C G+ G C+ +
Sbjct: 3 SCQDMSCSKQGECLETIGNYTCS-CYPGFYGP--ECEYV 38
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 31.2 bits (71), Expect = 0.039
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQ 184
C PC +C D + YTC C G+ G C+
Sbjct: 3 CETSPCQNQGKCKDGLGEYTCT-CLEGFEGK--NCE 35
Score = 28.1 bits (63), Expect = 0.59
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 237 DECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 269
D+C+ PC + +C + Y C C GF G
Sbjct: 1 DQCE-TSPCQNQGKCKDGLGEYTCT-CLEGFEG 31
Score = 25.8 bits (57), Expect = 3.8
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 1131 NQCDLAEPCDPRVQCTNLFPGYRCDPCPAGFTG 1163
+QC+ PC + +C + Y C C GF G
Sbjct: 1 DQCE-TSPCQNQGKCKDGLGEYTCT-CLEGFEG 31
Score = 24.7 bits (54), Expect = 9.8
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 112 NPCFPGVECRDTREGPRCMRCPDGYVGD 139
+PC +C+D C C +G+ G
Sbjct: 6 SPCQNQGKCKDGLGEYTC-TCLEGFEGK 32
Score = 24.7 bits (54), Expect = 9.8
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 594 NPCFPGVECRDTREGPRCMRCPDGYVGD 621
+PC +C+D C C +G+ G
Sbjct: 6 SPCQNQGKCKDGLGEYTC-TCLEGFEGK 32
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 31.3 bits (71), Expect = 0.041
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGD 179
C C +C +T+ YTC C G++G
Sbjct: 4 CTNTSCSGHGECVETINNYTCK-CDPGFSGL 33
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 29.3 bits (66), Expect = 0.24
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 292 DECADGRNGGCDSNSMCTNTEGSFTCTSLCRNSY 325
+EC D NGGC +C + + + C C + +
Sbjct: 3 NECLDN-NGGCSH--VCNDLKIGYECL--CPDGF 31
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 28.3 bits (63), Expect = 0.59
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 111 DNPCFPGVECRDTREGPRCM-RCPDGYVGD 139
D C C + C GY+G+
Sbjct: 9 DGYCLHDGVCMYIEALDKYACNCVVGYIGE 38
Score = 28.3 bits (63), Expect = 0.59
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 593 DNPCFPGVECRDTREGPRCM-RCPDGYVGD 621
D C C + C GY+G+
Sbjct: 9 DGYCLHDGVCMYIEALDKYACNCVVGYIGE 38
Score = 26.8 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 149 CNMRPCFQGVQCF--DTVEGYTCGPCPSGYTGDGERCQ 184
+ C C + ++ Y C C GY GERCQ
Sbjct: 7 SHDGYCLHDGVCMYIEALDKYACN-CVVGYI--GERCQ 41
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human
(Homo sapiens), isoform V [TaxId: 9606]}
Length = 438
Score = 31.5 bits (70), Expect = 0.65
Identities = 22/164 (13%), Positives = 43/164 (26%), Gaps = 4/164 (2%)
Query: 822 TVPNVDQTDTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPR 881
++ N D++ D + P + + +
Sbjct: 263 SLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRA 322
Query: 882 VSNPEQTDSNSNHIGDVCDSGVDTDHDGVPDPMDNCPKVANPNQLDNDRDGKGDECDPDL 941
+ + T N + S + D D ++ +A P D KG +
Sbjct: 323 SGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIA-IAAPY---GGEDKKGIVYIFNG 378
Query: 942 DGDGISNDEDNCRLIYNPNQDDSDGDGVGNVCDKDFDKDGTPDV 985
G++ + G D DK+G PD+
Sbjct: 379 RSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDL 422
Score = 28.4 bits (62), Expect = 7.1
Identities = 23/135 (17%), Positives = 35/135 (25%), Gaps = 3/135 (2%)
Query: 781 GDACDNCPTDNCPYVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQTDTDNDGTGDAC 840
GD + ++ + G L A + T G+ A
Sbjct: 287 GDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAP 346
Query: 841 DNDMDNDGINNHADNCPRNANPDQRDS---DHDGIGDACDNCPRVSNPEQTDSNSNHIGD 897
D+D DG N+ A P + + G + S G
Sbjct: 347 LGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGY 406
Query: 898 VCDSGVDTDHDGVPD 912
D D +G PD
Sbjct: 407 SMKGATDIDKNGYPD 421
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 28.3 bits (63), Expect = 0.65
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 142 HCKPGVTCNMRPCFQGVQCFDTVEG-YTCGPCPSGYTGDGERCQR 185
H C +G F E +C C GY G RC+R
Sbjct: 4 HFSRCPKQYKHYCIKGRCRFVVAEQTPSC-VCDEGYI--GARCER 45
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 28.4 bits (63), Expect = 0.79
Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 9/52 (17%)
Query: 149 CNMRPCFQGVQCF-----DTVEGYTCGPCPSGYTGDGERCQ-RIGGCSRNPC 194
C G +CF Y C C G+TG RC + +N
Sbjct: 9 KEKTFCVNGGECFMVKDLSNPSRYLCK-CQPGFTGA--RCTENVPMKVQNQE 57
Score = 25.3 bits (55), Expect = 9.9
Identities = 7/44 (15%), Positives = 11/44 (25%), Gaps = 4/44 (9%)
Query: 288 CVDIDECADG--RNGGCDSNSMCTNTEGSFTCTSLCRNSYMVRN 329
V E NGG + + C C+ +
Sbjct: 3 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCK--CQPGFTGAR 44
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 27.5 bits (61), Expect = 0.87
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCG-PCPSGYTGDGERCQ 184
C+ CF G C + CP G+ G C+
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGK--SCE 35
Score = 27.1 bits (60), Expect = 1.5
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 112 NPCFPGVECRDTREGPRCM-RCPDGYVGD 139
CF G C+ + +CP+G+ G
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEGFAGK 32
Score = 27.1 bits (60), Expect = 1.5
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 594 NPCFPGVECRDTREGPRCM-RCPDGYVGD 621
CF G C+ + +CP+G+ G
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEGFAGK 32
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 30.7 bits (68), Expect = 0.97
Identities = 17/170 (10%), Positives = 27/170 (15%), Gaps = 11/170 (6%)
Query: 108 CATDNPCFPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGVQCFDTVEGY 167
P R G + + FQ F ++ +
Sbjct: 100 WGCPWSRRPDGSVNVRRFGGMKIER------TWFAADKTGFHMLHTLFQTSLQFPQIQRF 153
Query: 168 TCGPCPSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTT 227
DG + + Y T
Sbjct: 154 DEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAV-VMATGGAGRVYRYNT--NGGIVT 210
Query: 228 GNGTRCHDIDECDLAEPCDPRVQCTNLFPGYRCDPCPAGFTGSTGVQGVG 277
G+G L + G S G+ G
Sbjct: 211 GDGMGMALSHGVPLRDMGGIETDQNCET--RIKGLFAVGECSSVGLHGAN 258
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 29.5 bits (65), Expect = 1.4
Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Query: 830 DTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTD 889
D D DGT + + + ++ D+D +G D + ++ +
Sbjct: 19 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ 78
Query: 890 SNSNHIGDVCDSGVDTDHDGV--PDPMDNCPKVANPNQLDNDRDGKGDECDPDLDG 943
+ + + D D +G+ + + D++ D E D D DG
Sbjct: 79 DSEEELIEAFKV-FDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 133
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia
coli [TaxId: 562]}
Length = 390
Score = 30.4 bits (67), Expect = 1.5
Identities = 27/212 (12%), Positives = 49/212 (23%), Gaps = 7/212 (3%)
Query: 58 CVDHGTVAMTQSLKKMFDSMKNPQMRLRKTDEESVDEIELPAIPIVKKPTCATDN---PC 114
+ G ++ K + + P+ ++ + AIP+ T
Sbjct: 92 LLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNA 151
Query: 115 FPGVECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPCFQGV--QCFDTVEGYTCGPC 172
+ + T + V + T R GV TVE Y P
Sbjct: 152 GAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPV 211
Query: 173 PSGYTGDGERCQRIGGCSRNPCAQGKLNEKTRCVRCDDIPEHPYYRCGSCPEGTTGNGTR 232
+ + P A + VR + + G G +
Sbjct: 212 DAKIHDRFAEGILLTLIEDGPKALK--EPENYDVRANVMWAATQALNGLIGAGVPQDWAT 269
Query: 233 CHDIDECDLAEPCDPRVQCTNLFPGYRCDPCP 264
E D + P +
Sbjct: 270 HMLGHELTAMHGLDHAQTLAIVLPALWNEKRD 301
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 27.1 bits (60), Expect = 1.5
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Query: 142 HCKPGVTCNMRPCFQGVQCF-DTVEGYTCGPCPSGYTGDGERCQRI 186
H + + CF G F + C C SGY G RC+
Sbjct: 3 HFNDCPDSHTQFCFHGTCRFLVQEDKPAC-VCHSGYV--GARCEHA 45
>d1p3da2 c.59.1.1 (A:322-473) UDP-N-acetylmuramate-alanine ligase
MurC {Haemophilus influenzae [TaxId: 727]}
Length = 152
Score = 29.3 bits (64), Expect = 1.6
Identities = 11/94 (11%), Positives = 22/94 (23%)
Query: 794 YVHNPDQLDSDQDGMRDRRLGDACDNCPTVPNVDQTDTDNDGTGDACDNDMDNDGINNHA 853
Y H+P ++ R+ +T D ++ +A
Sbjct: 25 YGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYA 84
Query: 854 DNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQ 887
D + + VS+ Q
Sbjct: 85 AGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQ 118
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 27.1 bits (60), Expect = 1.7
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Query: 153 PCFQGVQCFD-TVEGYTCGPCPSGYTGDGERCQ 184
C G + + C C GYT G RC+
Sbjct: 13 YCLHGQCIYLVDMSQNYC-RCEVGYT--GVRCE 42
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 26.7 bits (59), Expect = 2.6
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 149 CNMRPCFQGVQCFDTVEGYTCGPCPSGYTGDGERCQR 185
C C G C D + ++C C SG+ G CQR
Sbjct: 11 CASLCCGHG-TCIDGIGSFSCD-CRSGWEGR--FCQR 43
>d2r7da2 b.40.4.16 (A:3-403) Ribonuclease II family protein DR0020
{Deinococcus radiodurans [TaxId: 1299]}
Length = 401
Score = 29.2 bits (64), Expect = 3.3
Identities = 10/50 (20%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 997 RTDFRRYTTVILDPQGTSQIDP--HWVIYNHGAEILQTMNSDPGLAIGQD 1044
R D T +D +G D G L +D + D
Sbjct: 79 RLDLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPD 128
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 26.3 bits (58), Expect = 3.6
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 4/40 (10%)
Query: 299 NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQN 338
NG CD C + S C+ C Y + + C
Sbjct: 7 NGDCDQ--FCHEEQNSVVCS--CARGYTLADNGKACIPTG 42
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 26.3 bits (58), Expect = 3.8
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 299 NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQSQNFGADVCPDG 347
NGGCD C C+ C + Y++ + S C S + P G
Sbjct: 5 NGGCDQ--FCREERSEVRCS--CAHGYVLGDDSKSCVS----TERFPCG 45
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 25.9 bits (57), Expect = 4.7
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Query: 299 NGGCDSNSMCTNTEGSFTCTSLCRNSYMVRNVSVGCQS 336
NGGC C G C+ C Y + + + C
Sbjct: 6 NGGCTH--YCLEEVGWRRCS--CAPGYKLGDDLLQCHP 39
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 25.6 bits (56), Expect = 4.8
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 149 CNMRPCFQGVQCFDT-VEGYTCGPCPSGYTGDGERCQ 184
C PC C ++ Y C +GY+G C
Sbjct: 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP--NCT 39
Score = 24.8 bits (54), Expect = 9.1
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 236 IDECDLAEPCDPRVQCTNLFP-GYRCDPCPAGFTGST 271
++ C PC + C Y+CD G++G
Sbjct: 2 VNPCC-YYPCQHQGICVRFGLDRYQCDCTRTGYSGPN 37
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 26.0 bits (57), Expect = 5.3
Identities = 12/36 (33%), Positives = 12/36 (33%), Gaps = 4/36 (11%)
Query: 119 ECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPC 154
C G RC C DGY GD R C
Sbjct: 22 HCPTGTAGKRCELCDDGYFGD--PLGSNGPV--RLC 53
Score = 26.0 bits (57), Expect = 5.3
Identities = 12/36 (33%), Positives = 12/36 (33%), Gaps = 4/36 (11%)
Query: 601 ECRDTREGPRCMRCPDGYVGDGIHCKPGVTCNMRPC 636
C G RC C DGY GD R C
Sbjct: 22 HCPTGTAGKRCELCDDGYFGD--PLGSNGPV--RLC 53
>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 56
Score = 26.0 bits (57), Expect = 5.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 118 VECRDTREGPRCMRCPDGYVGDGIHCKPGVTC 149
++C G C RC +G+ G+ + P C
Sbjct: 23 LKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 26.0 bits (57), Expect = 5.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 600 VECRDTREGPRCMRCPDGYVGDGIHCKPGVTC 631
++C G C RC +G+ G+ + P C
Sbjct: 23 LKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
>d1t8da1 d.169.1.1 (A:1-143) Low affinity immunoglobulin epsilon Fc
receptor {Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 27.3 bits (59), Expect = 7.4
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 166 GYTCGPCPSGYTGDGERC 183
G+ C CP + +C
Sbjct: 2 GFVCNTCPEKWINFQRKC 19
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 26.8 bits (58), Expect = 9.0
Identities = 21/116 (18%), Positives = 31/116 (26%), Gaps = 3/116 (2%)
Query: 830 DTDNDGTGDACDNDMDNDGINNHADNCPRNANPDQRDSDHDGIGDACDNCPRVSNPEQTD 889
D D GT D + + + + D + G + D ++
Sbjct: 16 DADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEK 75
Query: 890 SNSNHIGDVCDSGVDTDHDGVPDPMD--NCPKVANPNQLDNDRDGKGDECDPDLDG 943
I D D G + K N D + DE D D DG
Sbjct: 76 DTKEEILKAFKL-FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDG 130
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 24.8 bits (54), Expect = 9.7
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 149 CNMRPCFQGVQCFDT-VEGYTCGPCPSGYTGDGERCQ 184
C PC +C T + Y C +G+ G+ C
Sbjct: 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE--NCT 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.460
Gapped
Lambda K H
0.267 0.0432 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 5,386,491
Number of extensions: 282815
Number of successful extensions: 1392
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1256
Number of HSP's successfully gapped: 309
Length of query: 1290
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1194
Effective length of database: 1,089,516
Effective search space: 1300882104
Effective search space used: 1300882104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)