Query psy6201
Match_columns 220
No_of_seqs 125 out of 1216
Neff 5.9
Searched_HMMs 46136
Date Fri Aug 16 20:19:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6201.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6201hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1712|consensus 100.0 3.1E-36 6.7E-41 247.0 15.1 161 28-220 15-181 (183)
2 PLN02293 adenine phosphoribosy 100.0 5.4E-31 1.2E-35 222.6 17.1 159 28-220 21-184 (187)
3 COG0503 Apt Adenine/guanine ph 100.0 3.6E-30 7.9E-35 216.1 17.4 159 28-220 12-177 (179)
4 PRK13810 orotate phosphoribosy 100.0 1.8E-28 4E-33 207.2 13.7 141 33-220 33-182 (187)
5 PRK02304 adenine phosphoribosy 100.0 4.4E-27 9.5E-32 195.7 17.1 158 29-220 11-173 (175)
6 PRK09219 xanthine phosphoribos 100.0 1.5E-27 3.1E-32 202.0 13.8 149 44-220 23-178 (189)
7 TIGR01744 XPRTase xanthine pho 99.9 3.1E-27 6.7E-32 200.3 15.1 146 47-220 26-178 (191)
8 TIGR01090 apt adenine phosphor 99.9 8.6E-27 1.9E-31 193.1 16.7 159 28-220 5-169 (169)
9 PRK12560 adenine phosphoribosy 99.9 7.1E-26 1.5E-30 191.2 15.8 155 29-220 11-176 (187)
10 PRK13809 orotate phosphoribosy 99.9 6.6E-26 1.4E-30 194.3 14.8 143 33-220 27-178 (206)
11 TIGR01743 purR_Bsub pur operon 99.9 1.5E-25 3.3E-30 198.7 16.4 144 43-220 100-250 (268)
12 PRK05500 bifunctional orotidin 99.9 5.2E-26 1.1E-30 215.4 13.6 143 31-220 302-453 (477)
13 PRK09213 pur operon repressor; 99.9 2.7E-25 5.9E-30 197.4 16.5 145 43-220 102-252 (271)
14 PRK13812 orotate phosphoribosy 99.9 1.3E-25 2.7E-30 188.1 13.4 139 33-220 20-167 (176)
15 COG0461 PyrE Orotate phosphori 99.9 3.7E-25 8.1E-30 188.7 13.2 144 31-220 18-172 (201)
16 TIGR00336 pyrE orotate phospho 99.9 1.8E-24 3.9E-29 180.1 12.7 142 34-220 14-170 (173)
17 PRK13811 orotate phosphoribosy 99.9 2.5E-24 5.5E-29 179.1 13.0 137 33-220 19-164 (170)
18 PRK08558 adenine phosphoribosy 99.9 1.8E-23 3.8E-28 182.7 14.5 145 43-220 83-237 (238)
19 PRK00455 pyrE orotate phosphor 99.9 6.8E-23 1.5E-27 174.2 14.4 143 33-220 22-173 (202)
20 TIGR01367 pyrE_Therm orotate p 99.9 3.1E-22 6.7E-27 169.1 16.2 141 32-220 15-162 (187)
21 PRK02277 orotate phosphoribosy 99.9 1.5E-20 3.2E-25 160.2 14.8 141 39-220 50-196 (200)
22 PRK07322 adenine phosphoribosy 99.8 7.8E-19 1.7E-23 147.0 16.9 145 28-205 12-163 (178)
23 PRK06031 phosphoribosyltransfe 99.8 7E-19 1.5E-23 153.5 13.9 139 44-211 54-202 (233)
24 COG0856 Orotate phosphoribosyl 99.8 8.5E-19 1.8E-23 146.1 11.4 133 44-219 56-196 (203)
25 PF00156 Pribosyltran: Phospho 99.7 9.6E-16 2.1E-20 118.6 13.0 120 48-199 2-125 (125)
26 PRK09177 xanthine-guanine phos 99.3 5.4E-11 1.2E-15 97.9 11.7 111 49-202 8-119 (156)
27 PLN02238 hypoxanthine phosphor 99.2 4.2E-10 9E-15 95.4 13.0 118 47-203 8-138 (189)
28 PRK09162 hypoxanthine-guanine 99.2 7.7E-10 1.7E-14 92.9 13.0 117 48-202 14-137 (181)
29 TIGR01203 HGPRTase hypoxanthin 99.1 2.2E-09 4.8E-14 89.0 13.5 116 50-202 2-124 (166)
30 COG2236 Predicted phosphoribos 99.0 1.2E-09 2.7E-14 93.0 9.4 55 49-103 5-60 (192)
31 PRK00934 ribose-phosphate pyro 99.0 2.8E-09 6.1E-14 95.5 10.9 107 60-210 142-252 (285)
32 COG1926 Predicted phosphoribos 99.0 1.4E-09 2.9E-14 93.6 8.1 130 57-197 8-159 (220)
33 PRK15423 hypoxanthine phosphor 99.0 1.6E-08 3.6E-13 85.0 13.6 120 47-203 5-133 (178)
34 PRK07199 phosphoribosylpyropho 98.9 9.9E-09 2.1E-13 92.8 11.8 100 60-202 148-251 (301)
35 PRK01259 ribose-phosphate pyro 98.9 7.8E-09 1.7E-13 93.7 11.0 98 61-201 146-247 (309)
36 PRK05205 bifunctional pyrimidi 98.9 4.1E-08 8.8E-13 81.9 13.1 119 48-202 4-136 (176)
37 PRK02269 ribose-phosphate pyro 98.8 3.2E-08 6.9E-13 90.2 11.5 103 58-201 148-256 (320)
38 TIGR01251 ribP_PPkin ribose-ph 98.8 3.4E-08 7.4E-13 89.4 11.1 86 73-200 159-248 (308)
39 PRK07349 amidophosphoribosyltr 98.8 1.8E-08 3.9E-13 96.8 8.7 111 54-197 296-412 (500)
40 PTZ00271 hypoxanthine-guanine 98.8 1.3E-07 2.7E-12 81.8 12.8 116 48-202 25-158 (211)
41 PRK08525 amidophosphoribosyltr 98.7 4.7E-08 1E-12 92.7 9.7 113 54-200 259-378 (445)
42 PRK00553 ribose-phosphate pyro 98.7 1.3E-07 2.7E-12 86.8 11.8 83 75-200 170-256 (332)
43 PRK09123 amidophosphoribosyltr 98.7 1.7E-07 3.6E-12 89.8 11.0 110 54-197 279-395 (479)
44 PRK06781 amidophosphoribosyltr 98.7 5.3E-08 1.1E-12 93.0 7.3 111 54-197 267-383 (471)
45 PRK05793 amidophosphoribosyltr 98.6 1.5E-07 3.2E-12 89.9 9.7 111 55-199 273-390 (469)
46 PTZ00149 hypoxanthine phosphor 98.6 3.7E-07 8E-12 80.4 11.4 120 44-203 51-191 (241)
47 PRK06827 phosphoribosylpyropho 98.6 3.6E-07 7.8E-12 85.3 11.6 92 73-201 207-303 (382)
48 PRK04923 ribose-phosphate pyro 98.6 6.7E-07 1.5E-11 81.6 11.9 86 73-201 166-256 (319)
49 PRK02458 ribose-phosphate pyro 98.5 5.2E-07 1.1E-11 82.4 10.0 83 75-201 171-257 (323)
50 PLN02440 amidophosphoribosyltr 98.5 4.6E-07 1E-11 86.7 9.8 112 54-199 259-377 (479)
51 TIGR01134 purF amidophosphorib 98.5 1.8E-07 4E-12 88.6 6.6 112 54-198 257-374 (442)
52 COG0634 Hpt Hypoxanthine-guani 98.5 4.7E-06 1E-10 70.1 13.4 118 45-203 6-134 (178)
53 PRK08341 amidophosphoribosyltr 98.5 6.1E-07 1.3E-11 85.2 8.7 108 54-197 255-369 (442)
54 PRK03092 ribose-phosphate pyro 98.4 1.8E-06 3.9E-11 78.2 10.9 83 75-198 150-237 (304)
55 COG0462 PrsA Phosphoribosylpyr 98.4 2E-06 4.4E-11 78.2 11.1 84 75-201 165-253 (314)
56 PLN02369 ribose-phosphate pyro 98.4 2.1E-06 4.5E-11 77.8 10.8 80 76-198 154-238 (302)
57 PRK07272 amidophosphoribosyltr 98.4 4.3E-07 9.4E-12 87.1 6.6 112 54-198 269-386 (484)
58 PRK06388 amidophosphoribosyltr 98.4 1.1E-06 2.5E-11 84.0 9.2 110 54-197 275-391 (474)
59 PRK02812 ribose-phosphate pyro 98.4 3.2E-06 6.9E-11 77.5 11.4 82 74-198 180-266 (330)
60 PRK07631 amidophosphoribosyltr 98.4 4.7E-07 1E-11 86.6 6.0 111 54-197 267-383 (475)
61 PRK09246 amidophosphoribosyltr 98.4 1.1E-06 2.4E-11 84.6 8.5 111 58-198 276-394 (501)
62 TIGR00201 comF comF family pro 98.4 3.8E-06 8.2E-11 70.7 10.2 124 44-199 49-189 (190)
63 PRK07847 amidophosphoribosyltr 98.3 2.5E-06 5.5E-11 82.3 9.2 110 54-196 286-401 (510)
64 PRK11595 DNA utilization prote 98.2 1.5E-05 3.3E-10 69.0 9.9 131 37-199 71-224 (227)
65 PLN02297 ribose-phosphate pyro 98.1 2E-05 4.4E-10 72.2 10.8 97 59-201 168-269 (326)
66 PTZ00145 phosphoribosylpyropho 98.1 2.7E-05 5.9E-10 73.9 10.2 96 61-199 267-372 (439)
67 COG1040 ComFC Predicted amidop 98.1 1E-05 2.2E-10 70.5 6.7 132 36-200 74-222 (225)
68 COG2065 PyrR Pyrimidine operon 97.9 0.00026 5.6E-09 59.2 12.1 39 164-202 94-137 (179)
69 COG0034 PurF Glutamine phospho 97.9 4.9E-05 1.1E-09 72.1 7.8 118 44-197 260-383 (470)
70 PRK00129 upp uracil phosphorib 97.7 0.0002 4.3E-09 61.5 8.9 94 76-211 73-171 (209)
71 TIGR01091 upp uracil phosphori 97.5 0.00049 1.1E-08 59.0 8.6 95 75-211 70-169 (207)
72 PF14572 Pribosyl_synth: Phosp 97.5 0.0003 6.6E-09 59.7 7.1 111 76-201 6-122 (184)
73 PF15609 PRTase_2: Phosphoribo 97.3 0.004 8.8E-08 53.2 11.7 126 47-202 27-162 (191)
74 KOG3367|consensus 96.9 0.0066 1.4E-07 51.4 9.0 120 44-203 30-166 (216)
75 KOG0572|consensus 96.7 0.0029 6.3E-08 59.3 5.7 110 54-196 275-390 (474)
76 KOG1377|consensus 96.5 0.0054 1.2E-07 54.4 5.7 126 32-202 53-192 (261)
77 PLN02541 uracil phosphoribosyl 95.8 0.011 2.4E-07 52.3 4.0 50 162-211 153-206 (244)
78 KOG1448|consensus 95.5 0.056 1.2E-06 49.2 7.5 106 46-200 142-252 (316)
79 KOG1712|consensus 90.2 0.041 8.9E-07 46.2 -1.9 140 37-211 9-154 (183)
80 PF14681 UPRTase: Uracil phosp 85.4 10 0.00022 32.4 9.8 44 165-211 120-170 (207)
81 PF15610 PRTase_3: PRTase ComF 67.5 90 0.002 28.3 10.8 125 47-196 26-172 (274)
82 COG0035 Upp Uracil phosphoribo 65.2 11 0.00023 32.9 4.4 46 164-211 122-172 (210)
83 PF13793 Pribosyltran_N: N-ter 63.8 68 0.0015 25.0 8.4 69 82-194 7-83 (116)
84 PRK07199 phosphoribosylpyropho 55.4 1E+02 0.0022 28.0 9.1 26 82-107 9-34 (301)
85 COG3535 Uncharacterized conser 53.3 2E+02 0.0043 27.0 11.4 69 35-107 61-131 (357)
86 PRK04923 ribose-phosphate pyro 52.2 1.6E+02 0.0035 27.0 10.0 31 76-107 8-38 (319)
87 cd01714 ETF_beta The electron 51.8 28 0.00061 29.5 4.7 43 57-101 94-140 (202)
88 PLN02369 ribose-phosphate pyro 50.0 1E+02 0.0023 27.9 8.4 22 86-107 2-23 (302)
89 PRK02812 ribose-phosphate pyro 49.6 1.5E+02 0.0033 27.3 9.4 31 76-107 23-53 (330)
90 PRK01259 ribose-phosphate pyro 48.8 1E+02 0.0022 28.0 8.1 25 82-106 7-31 (309)
91 TIGR03492 conserved hypothetic 48.7 27 0.00059 32.5 4.5 26 73-101 93-118 (396)
92 PTZ00145 phosphoribosylpyropho 48.7 1.4E+02 0.003 28.9 9.3 31 76-107 121-151 (439)
93 PF11382 DUF3186: Protein of u 45.0 43 0.00093 30.4 5.1 39 164-202 81-123 (308)
94 PRK00934 ribose-phosphate pyro 44.5 1.6E+02 0.0035 26.3 8.6 26 82-107 6-31 (285)
95 TIGR01251 ribP_PPkin ribose-ph 42.8 2.2E+02 0.0047 25.7 9.3 25 82-106 7-31 (308)
96 PRK00553 ribose-phosphate pyro 42.7 2.3E+02 0.0049 26.1 9.5 26 82-107 16-41 (332)
97 PRK02269 ribose-phosphate pyro 42.0 2.4E+02 0.0052 25.7 9.5 31 76-107 7-37 (320)
98 PF00862 Sucrose_synth: Sucros 41.2 31 0.00067 34.1 3.6 88 11-103 336-431 (550)
99 PRK02458 ribose-phosphate pyro 39.7 2.9E+02 0.0062 25.3 9.6 30 76-106 11-40 (323)
100 COG0462 PrsA Phosphoribosylpyr 38.9 1.5E+02 0.0032 27.5 7.5 69 82-194 11-87 (314)
101 PRK08057 cobalt-precorrin-6x r 38.8 52 0.0011 29.0 4.5 34 72-105 189-224 (248)
102 PRK03092 ribose-phosphate pyro 37.9 2.1E+02 0.0045 25.9 8.4 21 87-107 1-21 (304)
103 TIGR00215 lpxB lipid-A-disacch 37.3 74 0.0016 29.4 5.5 44 57-102 75-119 (385)
104 PRK03359 putative electron tra 36.7 65 0.0014 28.7 4.8 42 58-101 99-144 (256)
105 KOG1503|consensus 34.0 2.8E+02 0.006 25.2 8.2 106 75-199 169-284 (354)
106 PRK05329 anaerobic glycerol-3- 33.7 44 0.00095 31.8 3.4 57 44-104 191-251 (422)
107 PRK12342 hypothetical protein; 32.9 81 0.0018 28.1 4.7 42 58-101 96-141 (254)
108 PF09651 Cas_APE2256: CRISPR-a 32.8 1E+02 0.0022 24.5 4.9 49 56-105 73-126 (136)
109 COG0371 GldA Glycerol dehydrog 32.5 75 0.0016 29.9 4.6 32 72-104 83-116 (360)
110 PF01012 ETF: Electron transfe 29.8 52 0.0011 26.3 2.8 42 58-101 77-119 (164)
111 cd01985 ETF The electron trans 26.8 1.1E+02 0.0024 24.9 4.3 42 58-101 78-120 (181)
112 cd01715 ETF_alpha The electron 26.2 1.3E+02 0.0028 24.2 4.6 43 57-101 69-112 (168)
113 PF06032 DUF917: Protein of un 26.2 91 0.002 29.0 4.0 68 37-108 59-128 (353)
114 PF10490 CENP-F_C_Rb_bdg: Rb-b 25.9 38 0.00082 22.7 1.1 18 27-45 21-38 (49)
115 TIGR00715 precor6x_red precorr 25.4 1.2E+02 0.0026 26.9 4.5 38 66-105 192-232 (256)
116 PTZ00331 alpha/beta hydrolase; 24.3 76 0.0016 27.0 3.0 34 161-194 166-205 (212)
117 PF04189 Gcd10p: Gcd10p family 22.9 1.6E+02 0.0035 26.9 4.9 28 162-191 198-226 (299)
118 PRK00025 lpxB lipid-A-disaccha 22.7 2.3E+02 0.005 25.2 5.9 44 58-103 72-116 (380)
119 cd03786 GT1_UDP-GlcNAc_2-Epime 22.5 2.5E+02 0.0053 24.7 6.0 47 54-102 71-118 (363)
120 TIGR00236 wecB UDP-N-acetylglu 22.5 2.2E+02 0.0047 25.4 5.7 47 54-102 69-116 (365)
121 PF13477 Glyco_trans_4_2: Glyc 22.4 1.7E+02 0.0036 21.9 4.3 40 62-103 65-106 (139)
122 PF02571 CbiJ: Precorrin-6x re 21.9 1.5E+02 0.0032 26.2 4.4 38 66-105 189-228 (249)
123 cd02426 Pol_gamma_b_Cterm C-te 21.8 3.9E+02 0.0085 20.8 6.5 66 37-104 22-92 (128)
124 PF05728 UPF0227: Uncharacteri 21.5 2.4E+02 0.0052 23.6 5.4 55 47-105 36-90 (187)
125 TIGR01426 MGT glycosyltransfer 21.4 2.2E+02 0.0049 25.7 5.6 29 72-102 91-119 (392)
126 PF00857 Isochorismatase: Isoc 21.3 1.1E+02 0.0025 24.1 3.3 34 161-194 132-171 (174)
127 cd01011 nicotinamidase Nicotin 20.5 79 0.0017 26.3 2.3 32 162-193 159-196 (196)
128 KOG1017|consensus 20.1 2.1E+02 0.0046 25.2 4.8 53 165-218 188-247 (267)
129 cd01012 YcaC_related YcaC rela 20.0 1.1E+02 0.0025 24.2 3.1 34 161-194 108-147 (157)
No 1
>KOG1712|consensus
Probab=100.00 E-value=3.1e-36 Score=246.99 Aligned_cols=161 Identities=43% Similarity=0.657 Sum_probs=154.7
Q ss_pred cCCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcC-CCccEEEeecccCcchHHHHhhhcCCCeEEEeeCC
Q psy6201 28 RNGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLK-DKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKG 106 (220)
Q Consensus 28 ~~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~-~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~ 106 (220)
-|.+||||+.|+. |.|+..++.||..|..+.+.+++++++.. .++|+|+|+|++|+.+|..+|.++|++||++||.+
T Consensus 15 ir~~pdFPk~GI~--F~Di~pll~dP~af~~lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~fVPiRK~g 92 (183)
T KOG1712|consen 15 IRVVPDFPKKGIM--FQDITPLLLDPKAFKKLIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAGFVPIRKPG 92 (183)
T ss_pred heeCCCCCCCcee--hhhhhhhhcCHHHHHHHHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCCeeecccCC
Confidence 6899999999999 99999999999999999999999999742 46999999999999999999999999999999999
Q ss_pred CCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHH
Q psy6201 107 KLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASC 182 (220)
Q Consensus 107 k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i 182 (220)
|+|| ++.+.+|+.+||++.+|++.+++.+|+||+||||+++|| ++.
T Consensus 93 KLPG------------------------------~~i~~~Y~lEYg~d~~Emq~~Ai~~g~rvvvVDDllATGGTl~AA~ 142 (183)
T KOG1712|consen 93 KLPG------------------------------EVISESYELEYGEDRFEMQKGAIKPGQRVVVVDDLLATGGTLAAAT 142 (183)
T ss_pred CCCC------------------------------ceeEEEEeeecCccceeeeccccCCCCeEEEEechhhcCccHHHHH
Confidence 9999 888999999999999999999999999999999999999 889
Q ss_pred HHHHhcCCeEEEEEEEEEecCcCCceeec-eeeEEeeeC
Q psy6201 183 QLLTTLGVDVVECFAVMELKDLNGRQKVP-SKVVSLLEF 220 (220)
Q Consensus 183 ~ll~~~Ga~v~~v~vli~~~~~~g~~~l~-~~v~sL~~~ 220 (220)
+|+++.||+|+.++|+++..++.|+++|. .|++||++|
T Consensus 143 ~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~~pl~~Ll~~ 181 (183)
T KOG1712|consen 143 ELLERVGAEVVECACVIELPELKGREKLKGKPLFSLLEY 181 (183)
T ss_pred HHHHHhccEEEEEEEEEEccccCCccccCCCccEEEeec
Confidence 99999999999999999999999999999 899999986
No 2
>PLN02293 adenine phosphoribosyltransferase
Probab=99.97 E-value=5.4e-31 Score=222.58 Aligned_cols=159 Identities=42% Similarity=0.660 Sum_probs=145.0
Q ss_pred cCCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 28 RNGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 28 ~~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.+|+||++|+. |+|++.++.||+.++.+++.|++++++ .++|+|+|+|++||++|.++|..+|+|++++||.+|
T Consensus 21 i~~~~~~p~~gi~--f~D~~~l~~~p~~~~~~~~~l~~~~~~--~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k 96 (187)
T PLN02293 21 IRVVPDFPKPGIM--FQDITTLLLDPKAFKDTIDLFVERYRD--MGISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGK 96 (187)
T ss_pred CccCCCCCcCCcE--EEECHHHhhCHHHHHHHHHHHHHHHhh--cCCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCC
Confidence 4789999999998 999999999999999999999999987 689999999999999999999999999999999988
Q ss_pred CCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHH
Q psy6201 108 LPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQ 183 (220)
Q Consensus 108 ~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ 183 (220)
.++ ...+..++.+||+..++++.+.+.+|+|||||||+++|| ++++
T Consensus 97 ~~~------------------------------~~~~~~~~~~~g~~~l~l~~~~i~~G~rVlIVDDvitTG~T~~~~~~ 146 (187)
T PLN02293 97 LPG------------------------------EVISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLCAAIN 146 (187)
T ss_pred CCC------------------------------ceEEEEEeccCCceEEEEEcCccCCCCEEEEEeccccchHHHHHHHH
Confidence 776 334445566788777888878888999999999999999 8889
Q ss_pred HHHhcCCeEEEEEEEEEecCcCCceeec-eeeEEeeeC
Q psy6201 184 LLTTLGVDVVECFAVMELKDLNGRQKVP-SKVVSLLEF 220 (220)
Q Consensus 184 ll~~~Ga~v~~v~vli~~~~~~g~~~l~-~~v~sL~~~ 220 (220)
+++++|+++++++++++....+|++++. +|++||++|
T Consensus 147 ~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~~~~sl~~~ 184 (187)
T PLN02293 147 LLERAGAEVVECACVIELPELKGREKLNGKPLFVLVES 184 (187)
T ss_pred HHHHCCCEEEEEEEEEEcCCccHHHHhcCCceEEEEec
Confidence 9999999999999999998888999997 999999976
No 3
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=99.97 E-value=3.6e-30 Score=216.07 Aligned_cols=159 Identities=38% Similarity=0.537 Sum_probs=144.8
Q ss_pred cCCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 28 RNGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 28 ~~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+..|+||.+|+. |+|....+.+|..+....+.|++++++ .++|+|+|+|++||++|+++|+.||+|||++||++|
T Consensus 12 i~~~~~~~~~g~~--f~d~~~~~~~~~~~~~~i~~~~~~~~~--~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~k 87 (179)
T COG0503 12 IREIPDFPKGGIL--FVDITLLLGDPELLAKLIDELAERYKD--DGIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGK 87 (179)
T ss_pred HhhcccccCCCce--EEecchhhcCcHHHHHHHHHHHHHhcc--cCCCEEEEEccccchhHHHHHHHhCCCEEEEEecCC
Confidence 5677899999999 999999999999999999999999998 689999999999999999999999999999999998
Q ss_pred CCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHH
Q psy6201 108 LPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQ 183 (220)
Q Consensus 108 ~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ 183 (220)
.+. .....++..+|+++.+++..+.+.+|+|||||||+++|| +..+
T Consensus 88 l~~------------------------------~~~~~~~~~~~~~~~l~~~~~~l~~G~rVlIVDDllaTGgT~~a~~~ 137 (179)
T COG0503 88 LPE------------------------------ESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTALALIE 137 (179)
T ss_pred CCC------------------------------cceeEEEEEeccceEEEEEhhhCCCCCEEEEEecchhcChHHHHHHH
Confidence 877 444456677787788999999999999999999999999 8889
Q ss_pred HHHhcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 184 LLTTLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 184 ll~~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
+++++||+++++++++++++.+|+.++. +|+.+|..+
T Consensus 138 Ll~~~ga~vvg~~~~ie~~~~~gr~~l~~~~~~v~~l~~~ 177 (179)
T COG0503 138 LLEQAGAEVVGAAFVIELGELDGRKKLEDDGLPVFSLVRI 177 (179)
T ss_pred HHHHCCCEEEEEEEEEEcCccccchhhccCCceEEEEEec
Confidence 9999999999999999999998988876 788887653
No 4
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=99.96 E-value=1.8e-28 Score=207.21 Aligned_cols=141 Identities=15% Similarity=0.208 Sum_probs=126.0
Q ss_pred ccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCC
Q psy6201 33 TYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPG 110 (220)
Q Consensus 33 ~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g 110 (220)
+|. +||..||+ +|++.++.+|+.++.+++.|++.+.+ .++|.|+|+|++|||+|+++|..+|+|++++||.+|.++
T Consensus 33 ~F~L~SG~~s~~yiD~~~~~~~p~~~~~i~~~la~~~~~--~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~~g 110 (187)
T PRK13810 33 DFTLSSGKKSKYYIDIKKASTDPKTLKLIARQAALRIKE--MDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKDYG 110 (187)
T ss_pred CEEEcCCCcCCEEEECchhcCCHHHHHHHHHHHHHHhcc--CCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCccC
Confidence 575 89999999 99999999999999999999999987 689999999999999999999999999999999877655
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
. ..+ .++.+.+|+||+|||||++|| +++++++
T Consensus 111 ------------------------------~------------~~~--~~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~ 146 (187)
T PRK13810 111 ------------------------------T------------GSR--FVGDLKPEDRIVMLEDVTTSGGSVREAIEVVR 146 (187)
T ss_pred ------------------------------C------------Cce--EEccCCCcCEEEEEEeccCCChHHHHHHHHHH
Confidence 1 111 135678999999999999999 8889999
Q ss_pred hcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 187 TLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++|++|+++++++|+.. +|++++. +|++||+++
T Consensus 147 ~~Ga~V~~v~vlvdr~~-g~~~~l~~~gi~~~sl~~~ 182 (187)
T PRK13810 147 EAGAYIKYVITVVDREE-GAEENLKEADVELVPLVSA 182 (187)
T ss_pred HCCCEEEEEEEEEECCc-ChHHHHHHcCCcEEEEEEH
Confidence 99999999999999985 6788886 999999874
No 5
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=99.95 E-value=4.4e-27 Score=195.66 Aligned_cols=158 Identities=44% Similarity=0.648 Sum_probs=136.3
Q ss_pred CCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCC
Q psy6201 29 NGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKL 108 (220)
Q Consensus 29 ~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~ 108 (220)
+.+|.||.+|.. |.|+++++.+|+.++.+++.+++.+.+ .++|+|+|++++|+++|..+|..+|+|++++||..+.
T Consensus 11 ~~~~~~~~~~~~--~~d~~~l~~~p~~~~~~~~~la~~~~~--~~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~~ 86 (175)
T PRK02304 11 RTIPDFPKPGIL--FRDITPLLADPEAFREVIDALVERYKD--ADIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGKL 86 (175)
T ss_pred ccCCCCCCCCcE--EEeChhHhcCHHHHHHHHHHHHHHhcc--CCCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 678999998877 899999999999999999999999986 5799999999999999999999999999999987654
Q ss_pred CCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHH
Q psy6201 109 PGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQL 184 (220)
Q Consensus 109 ~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~l 184 (220)
+. ...+.++..+|++..+++..+.+.+|+|||||||+++|| +++++
T Consensus 87 ~~------------------------------~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl~~~~~~ 136 (175)
T PRK02304 87 PR------------------------------ETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKL 136 (175)
T ss_pred CC------------------------------ceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHHHHHHHH
Confidence 43 222333444555556766666678999999999999999 78899
Q ss_pred HHhcCCeEEEEEEEEEecCcCCceeec-eeeEEeeeC
Q psy6201 185 LTTLGVDVVECFAVMELKDLNGRQKVP-SKVVSLLEF 220 (220)
Q Consensus 185 l~~~Ga~v~~v~vli~~~~~~g~~~l~-~~v~sL~~~ 220 (220)
++++||+++++++++++.+++|.++++ +|++||+++
T Consensus 137 l~~~Ga~~v~v~vl~~~~~~~g~~~l~~~~~~sl~~~ 173 (175)
T PRK02304 137 LERLGAEVVGAAFVIELPDLGGREKLEGYPVKSLVKF 173 (175)
T ss_pred HHHcCCEEEEEEEEEEcccccchhhcCCCceEEEEEe
Confidence 999999999999999999877888885 999999975
No 6
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=99.95 E-value=1.5e-27 Score=202.05 Aligned_cols=149 Identities=20% Similarity=0.215 Sum_probs=121.3
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccce
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGT 123 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~ 123 (220)
-|+-++..||++++.+++.|++.+.+ .++|+|+|+|++|||+|+++|..+|+|++++||++|.+...
T Consensus 23 ~~~~~~~~~P~~l~~i~~~la~~~~~--~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k~~~~~----------- 89 (189)
T PRK09219 23 DSFLNHQVDPKLMNEIGKEFARRFKD--EGITKILTIEASGIAPAVMAALALGVPVVFAKKKKSLTLTD----------- 89 (189)
T ss_pred hhhhccccCHHHHHHHHHHHHHHhcc--CCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCC-----------
Confidence 33555559999999999999999997 68999999999999999999999999999999988765300
Q ss_pred eccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 124 VLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
+.++ ....+++. .+...++++++.+.+|+|||||||+++|| +++++++++||+++++++++
T Consensus 90 ----~~~~----------~~~~~~~~-~~~~~l~i~~~~i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lv 154 (189)
T PRK09219 90 ----DVYT----------ATVYSFTK-QVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVI 154 (189)
T ss_pred ----ceEE----------EEEeeecc-CceEEEEEEhhhCCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEE
Confidence 0000 00011111 12346888899999999999999999999 88899999999999999999
Q ss_pred EecCcCCceeec---eeeEEeeeC
Q psy6201 200 ELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 200 ~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++.+.+|++++. +|++||+++
T Consensus 155 d~~~~~g~~~l~~~g~~~~sl~~~ 178 (189)
T PRK09219 155 EKSFQDGRKLLEEKGYRVESLARI 178 (189)
T ss_pred EccCccHHHHHHhcCCcEEEEEEe
Confidence 998767888774 899999875
No 7
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=99.95 E-value=3.1e-27 Score=200.28 Aligned_cols=146 Identities=22% Similarity=0.223 Sum_probs=121.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceecc
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLD 126 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~ 126 (220)
.+...||++++.+++.|++++.+ .++|+|+|+|++|||+|+++|.+||+|++++||.+|.++.. +
T Consensus 26 ~~~~~~p~~l~~v~~~l~~~~~~--~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k~~~~~---------~---- 90 (191)
T TIGR01744 26 LNHQIDPKLMQEVGEEFARRFAD--DGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKPLTLTD---------N---- 90 (191)
T ss_pred hccccCHHHHHHHHHHHHHHhcc--CCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCCCCCCC---------c----
Confidence 33357999999999999999987 68999999999999999999999999999999987765411 0
Q ss_pred CCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEec
Q psy6201 127 IPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~ 202 (220)
++ +....+++. |+...++++.+.+.+|+|||||||+++|| +++++++++||+|+++++++++.
T Consensus 91 --~~----------~~~~~s~~~-~~~~~l~i~~~~l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~ 157 (191)
T TIGR01744 91 --LL----------TASVHSFTK-QTTSTVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKS 157 (191)
T ss_pred --ce----------EEEEEEeec-CccEEEEEEHHhCCCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEec
Confidence 00 111222222 55567888888889999999999999999 88999999999999999999999
Q ss_pred CcCCceeec---eeeEEeeeC
Q psy6201 203 DLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 203 ~~~g~~~l~---~~v~sL~~~ 220 (220)
+++|++++. +|++||+++
T Consensus 158 ~~~g~~~l~~~gvpv~sL~~~ 178 (191)
T TIGR01744 158 FQNGRQELVELGYRVESLARI 178 (191)
T ss_pred CccHHHHHHhcCCcEEEEEEE
Confidence 778888874 899999875
No 8
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=99.95 E-value=8.6e-27 Score=193.06 Aligned_cols=159 Identities=43% Similarity=0.641 Sum_probs=136.7
Q ss_pred cCCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 28 RNGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 28 ~~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.+|+||.+|+. |+|++.++.||+.++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..+|+|++.+||+.+
T Consensus 5 ~~~~~~~~~~~~~--~~d~~~~l~~p~~~~~~~~~la~~i~~--~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~ 80 (169)
T TIGR01090 5 IRSIPDFPKKGIL--FRDITPLLNNPELFRFLIDLLVERYKD--ANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGK 80 (169)
T ss_pred cccCCCCCCCCce--eEeChhhhcCHHHHHHHHHHHHHHhcc--CCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5688999999999 999999999999999999999999987 679999999999999999999999999999998765
Q ss_pred CCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHH
Q psy6201 108 LPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQ 183 (220)
Q Consensus 108 ~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ 183 (220)
.+. ...+.+++.+++.+.+++....+.+|++||||||+++|| ++.+
T Consensus 81 ~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~~a~~ 130 (169)
T TIGR01090 81 LPG------------------------------ETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAEATDE 130 (169)
T ss_pred CCC------------------------------ceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHHHHHH
Confidence 443 222233334455445666555567999999999999999 8889
Q ss_pred HHHhcCCeEEEEEEEEEecCcCCceeec--eeeEEeeeC
Q psy6201 184 LLTTLGVDVVECFAVMELKDLNGRQKVP--SKVVSLLEF 220 (220)
Q Consensus 184 ll~~~Ga~v~~v~vli~~~~~~g~~~l~--~~v~sL~~~ 220 (220)
+++++|++++++++++++++++|.+.+. +|++||++|
T Consensus 131 ~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~~~~~~sl~~~ 169 (169)
T TIGR01090 131 LIRKLGGEVVEAAFLIELKDLNGRAKLEPNVPVFSLLEY 169 (169)
T ss_pred HHHHcCCEEEEEEEEEEccccChHHHhccCCceEEEEeC
Confidence 9999999999999999999888888885 899999987
No 9
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=99.94 E-value=7.1e-26 Score=191.21 Aligned_cols=155 Identities=22% Similarity=0.258 Sum_probs=128.3
Q ss_pred CCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCC
Q psy6201 29 NGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKL 108 (220)
Q Consensus 29 ~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~ 108 (220)
+.+++||++|+.-.|+|++.+++ |+.++.+++.|++.+ + .++|+|+|+|++|||+|+++|..+++|++++||.+..
T Consensus 11 ~~~~~~~~~~~~~~~~D~~~~l~-P~~l~~~~~~l~~~~-~--~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~~ 86 (187)
T PRK12560 11 RVVNSGKALTTVNEFTDQLPALR-PKVLKETAKEIIKYI-D--KDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPYS 86 (187)
T ss_pred CccCCCCCCCcceeEEeChhhcC-HHHHHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCCc
Confidence 78899999999555999999999 999999999999988 5 6899999999999999999999999999999986422
Q ss_pred CCchhhhhhccccceeccCCccccccCCCCCceeeeeee-eeeeeceEEE--EecCCCCCCCEEEEEecccCCC----hH
Q psy6201 109 PGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEY-GLEYGTDCIE--VQKDGGKAGKKALIVDDLIATG----AS 181 (220)
Q Consensus 109 ~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~le--~~~~~l~~G~rVLIVDDvi~TG----a~ 181 (220)
.. . ..+ ..+|++..++ +..+.+.+|+|||||||+++|| ++
T Consensus 87 ~~--------------------~-------------~~~~~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~~~a 133 (187)
T PRK12560 87 LS--------------------E-------------LNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVIAL 133 (187)
T ss_pred cc--------------------c-------------eeEEeeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHHHHH
Confidence 11 0 000 1133333333 4445678999999999999999 88
Q ss_pred HHHHHhcCCeEEEEEEEEEecCcCCceee-c---eeeEEeeeC
Q psy6201 182 CQLLTTLGVDVVECFAVMELKDLNGRQKV-P---SKVVSLLEF 220 (220)
Q Consensus 182 i~ll~~~Ga~v~~v~vli~~~~~~g~~~l-~---~~v~sL~~~ 220 (220)
+++++++||+++++++++++.+.+|++.+ + +|++||+++
T Consensus 134 i~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~~gv~v~sl~~~ 176 (187)
T PRK12560 134 IKAIENSGGIVSDVICVIEKTQNNGRKKLFTQTGINVKSLVKI 176 (187)
T ss_pred HHHHHHCCCEEEEEEEEEEecccchHHHHhhccCCcEEEEEEE
Confidence 89999999999999999999877788877 2 999999874
No 10
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=99.94 E-value=6.6e-26 Score=194.28 Aligned_cols=143 Identities=19% Similarity=0.247 Sum_probs=125.7
Q ss_pred ccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCC
Q psy6201 33 TYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPG 110 (220)
Q Consensus 33 ~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g 110 (220)
+|. +||..||+ +|++.++.+|+.++.+++.|++.+.. .++|+|+|++++|+|+|+++|..+|+|++++||..|.||
T Consensus 27 ~F~L~SG~~S~~y~D~~~i~~~p~~l~~i~~~l~~~~~~--~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G 104 (206)
T PRK13809 27 KFILASGEETPIYVDMRLVISSPEVLQTIATLIWRLRPS--FNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVD 104 (206)
T ss_pred CEEECCcCCCCEEEEChhhccCHHHHHHHHHHHHHHhcc--CCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCC
Confidence 575 89999999 99999999999999999999999876 689999999999999999999999999999999988887
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
.. ..+++ ++.+.+|+||+||||+++|| +++++++
T Consensus 105 ------------------------------~~-----------~~~~~-~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~ 142 (206)
T PRK13809 105 ------------------------------PS-----------DAIKV-EGLFTPGQTCLVINDMVSSGKSIIETAVALE 142 (206)
T ss_pred ------------------------------Cc-----------CEEEE-ccccCCCCEEEEEEeccccCHHHHHHHHHHH
Confidence 11 01222 34567999999999999999 8889999
Q ss_pred hcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 187 TLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++|++++++++++++.. +|++++. +|++||+++
T Consensus 143 ~~G~~vv~v~vlvdr~~-~~~~~l~~~gi~v~sl~~~ 178 (206)
T PRK13809 143 EEGLVVREALVFLDRQK-GACQPLGPQGIKLSSVFTV 178 (206)
T ss_pred HCCCEEEEEEEEEECcc-cHHHHHHhcCCCEEEEEEH
Confidence 99999999999999873 6777774 899999874
No 11
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=99.94 E-value=1.5e-25 Score=198.69 Aligned_cols=144 Identities=22% Similarity=0.352 Sum_probs=121.2
Q ss_pred ceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCC-CCchhhhhhcccc
Q psy6201 43 PRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKL-PGVVERLEYGLEY 121 (220)
Q Consensus 43 ~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~-~g~~~~~~~~~~~ 121 (220)
|++++.++.||++++.+++.|+..+.+ .++|+|+|+|++|||+|+++|.+||+|++++||.+|. ++
T Consensus 100 ~~~~s~ll~~P~~l~~ig~~la~~~~~--~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K~t~g----------- 166 (268)
T TIGR01743 100 YLYLTDILGKPSILSKIGKILASVFAE--REIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEG----------- 166 (268)
T ss_pred eEEechhhcCHHHHHHHHHHHHHHhcC--CCCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCCCCCC-----------
Confidence 688999999999999999999999987 6899999999999999999999999999999999876 33
Q ss_pred ceeccCCccccccCCCCCceeeeeeeeeeee--ceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEE
Q psy6201 122 GTVLDIPFVPIRKKGKLPGVVERLEYGLEYG--TDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVEC 195 (220)
Q Consensus 122 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v 195 (220)
++++ .+|...+. -+.++++++.+.+|+|||||||+++|| +++++++++||+|+++
T Consensus 167 ------~~vs-------------~nY~sgs~~~ie~m~l~k~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv 227 (268)
T TIGR01743 167 ------STVS-------------INYVSGSSNRIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGI 227 (268)
T ss_pred ------CcEE-------------EEEEcccCccceEEEEehhhCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEE
Confidence 2222 11111110 125788888999999999999999999 8889999999999999
Q ss_pred EEEEEecCcCCceeeceeeEEeeeC
Q psy6201 196 FAVMELKDLNGRQKVPSKVVSLLEF 220 (220)
Q Consensus 196 ~vli~~~~~~g~~~l~~~v~sL~~~ 220 (220)
++++++. ++++++..|++||+++
T Consensus 228 ~vlve~~--~~~~~l~~~~~SL~~~ 250 (268)
T TIGR01743 228 GVLIDNE--GVDEKLVDDYMSLLTL 250 (268)
T ss_pred EEEEECC--CChHHcCCCceEEEEE
Confidence 9999997 3566666789998864
No 12
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=99.93 E-value=5.2e-26 Score=215.42 Aligned_cols=143 Identities=16% Similarity=0.199 Sum_probs=127.6
Q ss_pred CCccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCC
Q psy6201 31 PATYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKL 108 (220)
Q Consensus 31 ~~~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~ 108 (220)
+.+|. +||..||| +|++.++.+|+.++.+++.+++.+.+ .++|+|+|++++|||+|+++|..+|+|++++||++|.
T Consensus 302 fG~F~L~SG~~S~~YiD~~~lls~P~~l~~v~~~la~~l~~--~~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K~ 379 (477)
T PRK05500 302 FGEYVQASGATFSYYIDLRKIISNPQLFHQVLSAYAEILKN--LTFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVKA 379 (477)
T ss_pred eCcEEECCcCcCCEEEEChhhhcCHHHHHHHHHHHHHHhcc--CCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcCc
Confidence 34675 89999999 99999999999999999999999987 6899999999999999999999999999999999887
Q ss_pred CCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHH
Q psy6201 109 PGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQL 184 (220)
Q Consensus 109 ~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~l 184 (220)
+|. .. +.++.+.+|+||||||||++|| +++++
T Consensus 380 ~G~------------------------------------------~~--~ieG~~~~G~rVlIVDDViTTGgSi~eaie~ 415 (477)
T PRK05500 380 HGT------------------------------------------RR--LIEGNFHPGETVVVVDDILITGKSVMEGAEK 415 (477)
T ss_pred cCC------------------------------------------Cc--eEecCCCCcCEEEEEEeccccCHHHHHHHHH
Confidence 771 01 1245678999999999999999 88899
Q ss_pred HHhcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 185 LTTLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 185 l~~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++++|++|+++++++|+.+ +|++++. +|++||+++
T Consensus 416 l~~aG~~V~~v~vlVDR~~-g~~~~L~~~gv~~~Sl~tl 453 (477)
T PRK05500 416 LKSAGLNVRDIVVFIDHEQ-GVKDKLQSHGYQAYSVLTI 453 (477)
T ss_pred HHHCCCEEEEEEEEEECCc-chHHHHHhcCCCEEEEEEH
Confidence 9999999999999999986 6778785 899999874
No 13
>PRK09213 pur operon repressor; Provisional
Probab=99.93 E-value=2.7e-25 Score=197.40 Aligned_cols=145 Identities=23% Similarity=0.365 Sum_probs=121.4
Q ss_pred ceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccc
Q psy6201 43 PRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYG 122 (220)
Q Consensus 43 ~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~ 122 (220)
|++++.++.||+.++.+++.+++++.+ .++|+|+|+|++|||+|+++|..||+|++++||.+|.+.
T Consensus 102 f~y~sdll~~P~~l~~i~~~la~~~~~--~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K~~~------------ 167 (271)
T PRK09213 102 YLYLSDLLGNPSILRKIGRIIASAFAD--KKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTE------------ 167 (271)
T ss_pred eEEeCcccCCHHHHHHHHHHHHHHhcc--cCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCC------------
Confidence 678899999999999999999999987 689999999999999999999999999999999887622
Q ss_pred eeccCCccccccCCCCCceeeeeeeeeee-e-ceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEE
Q psy6201 123 TVLDIPFVPIRKKGKLPGVVERLEYGLEY-G-TDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECF 196 (220)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~y-~-~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~ 196 (220)
+++++++ |.... + .+.++++++.+.+|+||||||||++|| +++++++++||+|++++
T Consensus 168 ----G~~vs~~-------------y~sgs~~~ie~m~L~~~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~ 230 (271)
T PRK09213 168 ----GSTVSIN-------------YVSGSSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIG 230 (271)
T ss_pred ----CCcEEEE-------------EEecccccceEEEEeHhhcCCcCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEE
Confidence 1222221 11100 0 125788899999999999999999999 88999999999999999
Q ss_pred EEEEecCcCCceeeceeeEEeeeC
Q psy6201 197 AVMELKDLNGRQKVPSKVVSLLEF 220 (220)
Q Consensus 197 vli~~~~~~g~~~l~~~v~sL~~~ 220 (220)
+++++.+ +.+++..|++||+++
T Consensus 231 vlVd~~~--~~~~l~~~~~SL~~~ 252 (271)
T PRK09213 231 VLVETKE--PEERLVDDYVSLLKL 252 (271)
T ss_pred EEEECCC--ChhhcCCceEEEEEE
Confidence 9999984 566666799999864
No 14
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=99.93 E-value=1.3e-25 Score=188.14 Aligned_cols=139 Identities=15% Similarity=0.188 Sum_probs=120.6
Q ss_pred ccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCC
Q psy6201 33 TYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPG 110 (220)
Q Consensus 33 ~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g 110 (220)
+|. +||..||| +|.+.+..+|+.++.++++|++.+.+ .|+|+|++++|+|+|+++|..+|+|++++||..|.++
T Consensus 20 ~f~l~SG~~S~~yid~~~~~~~p~~~~~i~~~l~~~i~~----~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~yg 95 (176)
T PRK13812 20 EFELSHGGTSEYYVDKYLFETDPDCLRLIAEAFADRIDE----DTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKEYG 95 (176)
T ss_pred CEEECcCCcCCEEEeCeeccCCHHHHHHHHHHHHHHhcc----CCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCcCC
Confidence 465 89999999 99999999999999999999999865 2999999999999999999999999999999876544
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
.. . .+ ++.+.+|+|||||||+++|| +++++++
T Consensus 96 ~~----------------------------~-------------~~---~g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~ 131 (176)
T PRK13812 96 TG----------------------------N-------------RI---EGRLDEGEEVVVLEDIATTGQSAVDAVEALR 131 (176)
T ss_pred CC----------------------------C-------------eE---EecCCCcCEEEEEEEeeCCCHHHHHHHHHHH
Confidence 00 0 11 24567999999999999999 8889999
Q ss_pred hcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 187 TLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++|++++++++++++.. +|+++++ +|++||+++
T Consensus 132 ~~Ga~vv~~~vlvdr~~-~~~~~l~~~g~~v~sL~~~ 167 (176)
T PRK13812 132 EAGATVNRVLVVVDREE-GARENLADHDVELEALVTA 167 (176)
T ss_pred HCCCeEEEEEEEEECCc-chHHHHHhcCCcEEEEEeH
Confidence 99999999999999974 6677774 999999874
No 15
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.93 E-value=3.7e-25 Score=188.72 Aligned_cols=144 Identities=22% Similarity=0.313 Sum_probs=122.0
Q ss_pred CCccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcC-CC-eEEEeeCC
Q psy6201 31 PATYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLD-IP-FVPIRKKG 106 (220)
Q Consensus 31 ~~~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg-~p-~V~vRK~~ 106 (220)
+++|+ +||+.||| +|++.++.+|+.++.++.+++..+++. .++|+|+|++++|||+|+++|..|+ .| ++++||+.
T Consensus 18 fG~f~LsSG~~SpyY~d~~~~~~~p~~~~~i~~~~a~~~~~~-~~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~ 96 (201)
T COG0461 18 FGEFTLSSGRKSPYYVDLRLFLTGPELLQLIAFALAEIIKEA-LEFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEA 96 (201)
T ss_pred cCceeecCCCcCCeEEecccccCCHHHHHHHHHHHHHHhhcc-CCCcEEEeccccchHHHHHHHHHhccCCcEEEEecee
Confidence 45676 89999999 999999999999999999999999872 4899999999999999999999982 23 89999999
Q ss_pred CCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHH
Q psy6201 107 KLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASC 182 (220)
Q Consensus 107 k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i 182 (220)
|.||.. ..+ ++...+|+||+||||+++|| .++
T Consensus 97 K~hG~~-----------------------------------------~~i---eG~~~~G~kVvvVEDViTTG~Si~eai 132 (201)
T COG0461 97 KDHGTG-----------------------------------------GLI---EGGEVKGEKVVVVEDVITTGGSILEAV 132 (201)
T ss_pred ccCCCc-----------------------------------------cee---EecCCCCCEEEEEEecccCCHhHHHHH
Confidence 988810 012 23344899999999999999 888
Q ss_pred HHHHhcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 183 QLLTTLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 183 ~ll~~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
+.++++|++|.++++++||.. ++++.+. ++++||+++
T Consensus 133 ~~l~~~G~~V~gv~~ivDR~~-~~~~~~~~~g~~~~sl~tl 172 (201)
T COG0461 133 EALREAGAEVVGVAVIVDRQS-GAKEVLKEYGVKLVSLVTL 172 (201)
T ss_pred HHHHHcCCeEEEEEEEEecch-hHHHHHHhcCCceEEEeeH
Confidence 999999999999999999973 5566665 888888763
No 16
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=99.92 E-value=1.8e-24 Score=180.07 Aligned_cols=142 Identities=20% Similarity=0.248 Sum_probs=123.4
Q ss_pred cc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCC-----eEEEeeCC
Q psy6201 34 YS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIP-----FVPIRKKG 106 (220)
Q Consensus 34 ~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p-----~V~vRK~~ 106 (220)
|. +||..||+ +|++.++.+|++++.+++.+++.+.+ +.++|+|+|++++|+++|+++|..+++| ++++||..
T Consensus 14 f~l~SG~~s~~y~d~~~i~~~p~~~~~v~~~~~~~~~~-~~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~ 92 (173)
T TIGR00336 14 FTLSSGRKSPYYFNIKLFNTGPELANLIARYAAAIIKS-HLEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEA 92 (173)
T ss_pred EEECCCCcCCEEEECeecCChHHHHHHHHHHHHHHHHh-cCCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCc
Confidence 64 89999999 89999999999999999999999885 2479999999999999999999999999 99999987
Q ss_pred CCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHH
Q psy6201 107 KLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASC 182 (220)
Q Consensus 107 k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i 182 (220)
|.++ .. . .+ .+.+.+|++||||||+++|| +++
T Consensus 93 k~~g------------------------------~~-------~----~~---~g~~~~g~~VlIVDDvi~TG~Tl~~a~ 128 (173)
T TIGR00336 93 KDHG------------------------------EG-------G----NI---EGELLEGDKVVVVEDVITTGTSILEAV 128 (173)
T ss_pred ccCC------------------------------CC-------C----ce---ecCCCCCCEEEEEeccccChHHHHHHH
Confidence 6555 10 0 01 23467899999999999999 888
Q ss_pred HHHHhcCCeEEEEEEEEEecCcCCceeec----eeeEEeeeC
Q psy6201 183 QLLTTLGVDVVECFAVMELKDLNGRQKVP----SKVVSLLEF 220 (220)
Q Consensus 183 ~ll~~~Ga~v~~v~vli~~~~~~g~~~l~----~~v~sL~~~ 220 (220)
++++++|++++++++++++++.+|++++. +|++||+++
T Consensus 129 ~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~~gv~~~sl~~~ 170 (173)
T TIGR00336 129 EIIQAAGGQVAGVIIAVDRQERSAGQEFEKEYGLPVISLITL 170 (173)
T ss_pred HHHHHcCCeEEEEEEEEecCchhHHHHHHHhcCCeEEEEEeH
Confidence 99999999999999999999766777763 899999875
No 17
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=99.92 E-value=2.5e-24 Score=179.12 Aligned_cols=137 Identities=19% Similarity=0.258 Sum_probs=116.1
Q ss_pred ccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCC
Q psy6201 33 TYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPG 110 (220)
Q Consensus 33 ~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g 110 (220)
+|. +||..||| +|++.++.+|+.++.+++.|++. .++|+|+|++++|+|+|+++|..+|+|++++||..|.++
T Consensus 19 ~f~L~SG~~s~~y~d~~~l~~~p~~~~~l~~~l~~~-----~~~d~Vvg~~~gGi~~A~~~a~~l~~p~~~~rK~~k~~g 93 (170)
T PRK13811 19 DFTLASGAKSRYYIDIKTAITHPALLKEIAAEVAKR-----YDFDVVAGVAVGGVPLAVAVSLAAGKPYAIIRKEAKDHG 93 (170)
T ss_pred CEEEccCCcCCEEEeCchhccCHHHHHHHHHHHHhh-----CCCCEEEecCcCcHHHHHHHHHHHCCCEEEEecCCCCCC
Confidence 464 89999999 79999999999999999988643 368999999999999999999999999999999876655
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
.. ... .+. .+|+|||||||+++|| +++++++
T Consensus 94 ------------------------------~~------------~~~--~g~-~~g~~VlIVDDvi~TG~T~~~~~~~l~ 128 (170)
T PRK13811 94 ------------------------------KA------------GLI--IGD-VKGKRVLLVEDVTTSGGSALYGIEQLR 128 (170)
T ss_pred ------------------------------Cc------------ceE--Ecc-cCCCEEEEEEecccccHHHHHHHHHHH
Confidence 10 111 122 4899999999999999 7889999
Q ss_pred hcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 187 TLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++||+++++++++++++ ++++++. +|++||+++
T Consensus 129 ~~Ga~v~~~~~~vdr~~-g~~~~l~~~gv~~~sl~~~ 164 (170)
T PRK13811 129 AAGAVVDDVVTVVDREQ-GAEELLAELGITLTPLVRV 164 (170)
T ss_pred HCCCeEEEEEEEEECCc-cHHHHHHhcCCcEEEEeEH
Confidence 99999999999999985 5677664 899999864
No 18
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=99.91 E-value=1.8e-23 Score=182.74 Aligned_cols=145 Identities=26% Similarity=0.326 Sum_probs=119.0
Q ss_pred ceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccc
Q psy6201 43 PRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYG 122 (220)
Q Consensus 43 ~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~ 122 (220)
|+|++.++.||++++.++..+++.+.+ .++|+|+|++++|||+|.++|..||+|++++||.++ ++..
T Consensus 83 y~d~~~il~~p~~~~~v~~~la~~~~~--~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~-~~~~---------- 149 (238)
T PRK08558 83 YVDNSSVVFDPSFLRLIAPVVAERFMG--LRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKE-TGVE---------- 149 (238)
T ss_pred EEEchhhhcCHHHHHHHHHHHHHHccC--CCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCC-CCCc----------
Confidence 899999999999999999999999987 689999999999999999999999999999998743 4411
Q ss_pred eeccCCccccccCCCCCceeeeeee-eeeee-ceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEE
Q psy6201 123 TVLDIPFVPIRKKGKLPGVVERLEY-GLEYG-TDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECF 196 (220)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~~-~~~y~-~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~ 196 (220)
++++ .| +.+.+ ..+++++.+.+.+|+|||||||+++|| +++++++++||++++++
T Consensus 150 -----~~v~--------------~y~s~s~~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~ 210 (238)
T PRK08558 150 -----KFYE--------------EYQRLASGIEVTLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVF 210 (238)
T ss_pred -----ceEE--------------EeeccCCCceeEEEecHHHcCCcCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEE
Confidence 1111 01 00111 124667778889999999999999999 88899999999999999
Q ss_pred EEEEecCcCCceeec----eeeEEeeeC
Q psy6201 197 AVMELKDLNGRQKVP----SKVVSLLEF 220 (220)
Q Consensus 197 vli~~~~~~g~~~l~----~~v~sL~~~ 220 (220)
+++++++ .|.+++. +|+.||++|
T Consensus 211 vlv~~~~-~~~~~l~~~~~vpv~sl~~~ 237 (238)
T PRK08558 211 FLIAVGE-VGIDRAREETDAPVDALYTL 237 (238)
T ss_pred EEEecCc-hHHHHHhHhcCCCEEEEEEe
Confidence 9999986 3455552 899999875
No 19
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=99.90 E-value=6.8e-23 Score=174.19 Aligned_cols=143 Identities=23% Similarity=0.317 Sum_probs=120.8
Q ss_pred ccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCC
Q psy6201 33 TYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPG 110 (220)
Q Consensus 33 ~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g 110 (220)
+|. +||..||+ +|++.++.+|+.++.++..+++++.+.+.++|+|+|++++|+++|..+|..+++|++++||..+.++
T Consensus 22 ~f~l~SG~~s~~y~d~~~i~~~p~~~~~~~~~la~~i~~~~~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g 101 (202)
T PRK00455 22 HFTLSSGRKSPYYFDCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHG 101 (202)
T ss_pred CEEECCCCcCCeeEeChhhhcCHHHHHHHHHHHHHHHHhcCCCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCC
Confidence 464 89999999 8999999999999999999999999844489999999999999999999999999999998765443
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
.. ..++ .....|++||||||+++|| +++++++
T Consensus 102 ------------------------------~~-----------~~~~---~~~~~g~~VliVDDvi~tG~Tl~~~~~~l~ 137 (202)
T PRK00455 102 ------------------------------EG-----------GQIE---GRRLFGKRVLVVEDVITTGGSVLEAVEAIR 137 (202)
T ss_pred ------------------------------CC-----------ceEE---ccCCCCCEEEEEecccCCcHHHHHHHHHHH
Confidence 00 0111 1234699999999999999 7889999
Q ss_pred hcCCeEEEEEEEEEecCcCCceeec---eeeEEeeeC
Q psy6201 187 TLGVDVVECFAVMELKDLNGRQKVP---SKVVSLLEF 220 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~~~g~~~l~---~~v~sL~~~ 220 (220)
++|+++++++++++++ .++++++. +|++||+++
T Consensus 138 ~~Ga~~v~~~vlv~~~-~~~~~~~~~~g~~~~sl~~~ 173 (202)
T PRK00455 138 AAGAEVVGVAVIVDRQ-SAAQEVFADAGVPLISLITL 173 (202)
T ss_pred HcCCEEEEEEEEEECc-chHHHHHHhcCCcEEEEeeH
Confidence 9999999999999997 35666554 899999874
No 20
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=99.89 E-value=3.1e-22 Score=169.06 Aligned_cols=141 Identities=20% Similarity=0.255 Sum_probs=118.1
Q ss_pred Cccc-CCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCC
Q psy6201 32 ATYS-TPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLP 109 (220)
Q Consensus 32 ~~~~-~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~ 109 (220)
.+|. +||..||+ +|++.++.||+.++.+++.|++.+++.+.++|+|+|++++|+++|+.+|..+++|++++||.+
T Consensus 15 g~f~l~sg~~s~~yid~~~l~~~p~~~~~~~~~La~~i~~~~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~--- 91 (187)
T TIGR01367 15 GHFLLSSGKHSPYFLQSATLLEHPEALMELGGELAQKILDYGLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREG--- 91 (187)
T ss_pred ceEEecCCCcCCeeEechhhhcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeC---
Confidence 4576 89999999 999999999999999999999999874448999999999999999999999999999998763
Q ss_pred CchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHH
Q psy6201 110 GVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLL 185 (220)
Q Consensus 110 g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll 185 (220)
+ .. .+ .....+.+|++||||||+++|| ++.+++
T Consensus 92 ~------------------------------~~------------~~-~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~~~l 128 (187)
T TIGR01367 92 G------------------------------GM------------KL-RRGFAVKPGEKFVAVEDVVTTGGSLLEAIRAI 128 (187)
T ss_pred C------------------------------cE------------EE-eecccCCCCCEEEEEEeeecchHHHHHHHHHH
Confidence 2 00 00 0012346899999999999999 788999
Q ss_pred HhcCCeEEEEEEEEEecCcCCceee-ceeeEEeeeC
Q psy6201 186 TTLGVDVVECFAVMELKDLNGRQKV-PSKVVSLLEF 220 (220)
Q Consensus 186 ~~~Ga~v~~v~vli~~~~~~g~~~l-~~~v~sL~~~ 220 (220)
+++|++++++++++++.+ +.... .+|++||++|
T Consensus 129 ~~~Ga~vv~~~vlid~~~--~~~~~~~~~~~sl~~~ 162 (187)
T TIGR01367 129 EGQGGQVVGLACIIDRSQ--GGKPDSGVPLMSLKEL 162 (187)
T ss_pred HHcCCeEEEEEEEEECcC--CCcccCCCCEEEEEEE
Confidence 999999999999999884 33333 3899999875
No 21
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=99.85 E-value=1.5e-20 Score=160.16 Aligned_cols=141 Identities=18% Similarity=0.216 Sum_probs=111.0
Q ss_pred cccC-ceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhh
Q psy6201 39 FLSP-PRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEY 117 (220)
Q Consensus 39 ~~s~-~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~ 117 (220)
..|+ |+|+..+..+|+.++.+++.|++.+...+.++|+|+|++++|+|+|+.+|..|++|+.+.+++.+.++..
T Consensus 50 ~~~~~yid~~~~~~~~~~l~~i~~~la~~i~~~~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~----- 124 (200)
T PRK02277 50 APKDIHIDWSSIGSSSSRLRYIASAMADMLEKEDEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEG----- 124 (200)
T ss_pred CCCCEEEEChhhccCHHHHHHHHHHHHHHHHhcCCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEeccccccccc-----
Confidence 3344 4999999999999999999999998654468999999999999999999999999998887654322200
Q ss_pred ccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEE
Q psy6201 118 GLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVV 193 (220)
Q Consensus 118 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~ 193 (220)
.......+..| ...+|++||||||+++|| +++++++++||+++
T Consensus 125 -----------------------~~~~~~~~~~~----------~~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~~v 171 (200)
T PRK02277 125 -----------------------EKKTGSFSRNF----------ASVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPV 171 (200)
T ss_pred -----------------------ccccceecccc----------ccCCcCEEEEEeeccCchHHHHHHHHHHHHcCCEEE
Confidence 00000111111 235799999999999999 88899999999999
Q ss_pred EEEEEEEecCcCCceeec-eeeEEeeeC
Q psy6201 194 ECFAVMELKDLNGRQKVP-SKVVSLLEF 220 (220)
Q Consensus 194 ~v~vli~~~~~~g~~~l~-~~v~sL~~~ 220 (220)
++++++++. |.+.+. +|++||+++
T Consensus 172 ~v~vlvdk~---g~~~~~~vpv~sl~~~ 196 (200)
T PRK02277 172 AVVVLIDKS---GIDEIDGVPVYSLIRV 196 (200)
T ss_pred EEEEEEECc---chhhhcCCCeEEEEEE
Confidence 999999985 555565 899999874
No 22
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=99.82 E-value=7.8e-19 Score=146.99 Aligned_cols=145 Identities=21% Similarity=0.226 Sum_probs=111.3
Q ss_pred cCCCCcccCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 28 RNGPATYSTPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 28 ~~~~~~~~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.+|+|+.++.. +++...++.||.+++.+++.|++.+.. ++|+|++++++|+++|..+|..+|+|++++||.++
T Consensus 12 ~~~~~~~~~~~~~--~i~~~k~~~dp~l~~~~~~~La~~l~~---~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~ 86 (178)
T PRK07322 12 TRELPLIRVGPDL--AIALFVILGDTELTEAAAEALAKRLPT---EVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRK 86 (178)
T ss_pred EeecCeeEeCCCC--EEEEEhhhCCHHHHHHHHHHHHHHcCC---CCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCC
Confidence 6788999977666 799999999999999999999999874 68999999999999999999999999999988654
Q ss_pred CCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEE-EEecCC--CCCCCEEEEEecccCCC----h
Q psy6201 108 LPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCI-EVQKDG--GKAGKKALIVDDLIATG----A 180 (220)
Q Consensus 108 ~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l-e~~~~~--l~~G~rVLIVDDvi~TG----a 180 (220)
.+. +. ......++..++.... .+.... ..+|++||||||+++|| +
T Consensus 87 ~~~---------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~a 138 (178)
T PRK07322 87 PYM---------QD-------------------PIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVSTGGTLTA 138 (178)
T ss_pred CCC---------CC-------------------ceEEEEEEEEeccceEEEecCccccccCCCEEEEEeccccccHHHHH
Confidence 222 00 1111111111221122 221111 24799999999999999 8
Q ss_pred HHHHHHhcCCeEEEEEEEEEecCcC
Q psy6201 181 SCQLLTTLGVDVVECFAVMELKDLN 205 (220)
Q Consensus 181 ~i~ll~~~Ga~v~~v~vli~~~~~~ 205 (220)
++++++++||++++++++++++..+
T Consensus 139 a~~~L~~~GA~~V~~~~v~~~~~~~ 163 (178)
T PRK07322 139 LERLVERAGGQVVAKAAIFAEGDAS 163 (178)
T ss_pred HHHHHHHcCCEEEEEEEEEEcCCCC
Confidence 8899999999999999999998643
No 23
>PRK06031 phosphoribosyltransferase; Provisional
Probab=99.80 E-value=7e-19 Score=153.48 Aligned_cols=139 Identities=21% Similarity=0.243 Sum_probs=101.2
Q ss_pred eeccCCCCCH---HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCC-eEEEeeCCCCCCchhhhhhcc
Q psy6201 44 RDIFSVYRDQ---AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIP-FVPIRKKGKLPGVVERLEYGL 119 (220)
Q Consensus 44 ~D~~~~l~~p---~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p-~V~vRK~~k~~g~~~~~~~~~ 119 (220)
+|+..++.+| +.++.+++.|++++.. .++|+|+|++++||++|.++|..||++ ++.+++.+|.++.. .+
T Consensus 54 ~~i~~ll~~~~~~~~~~~la~~La~~~~~--~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~-----~l 126 (233)
T PRK06031 54 RALASLIVNQASFEVLDALAEHLAEKARA--FDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRD-----EL 126 (233)
T ss_pred CchhhHhCChhHHHHHHHHHHHHHHHccc--CCCcEEEEeccCCHHHHHHHHHHHCCCCceEEEEcccccccc-----cc
Confidence 6888899998 5556799999999986 679999999999999999999999985 67777666554300 00
Q ss_pred ccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecC--CCCCCCEEEEEecccCCC----hHHHHHHhcCCeEE
Q psy6201 120 EYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKD--GGKAGKKALIVDDLIATG----ASCQLLTTLGVDVV 193 (220)
Q Consensus 120 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~--~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~ 193 (220)
. + ...+.+.+ .. ...+++... .+.+|+|||||||+++|| +++++++++||+++
T Consensus 127 ~---------~----------~~~sitt~-~~-~~~~~l~~~~~~~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vv 185 (233)
T PRK06031 127 S---------V----------PLSSITTP-DQ-GKRLYIDPRMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPA 185 (233)
T ss_pred c---------c----------ceeeeecc-Cc-cceEEecccccccCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEE
Confidence 0 0 00000000 00 112333332 246899999999999999 88899999999999
Q ss_pred EEEEEEEecCcCCceeec
Q psy6201 194 ECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 194 ~v~vli~~~~~~g~~~l~ 211 (220)
++++++++++ ++++++.
T Consensus 186 gv~v~v~~g~-~~~~~l~ 202 (233)
T PRK06031 186 GIGAAMLQSE-RWRESLA 202 (233)
T ss_pred EEEEEEEccc-cHHHHHH
Confidence 9999999986 4665553
No 24
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=99.79 E-value=8.5e-19 Score=146.10 Aligned_cols=133 Identities=22% Similarity=0.234 Sum_probs=108.6
Q ss_pred eeccCCCCCHHHHHHHHHHHHH-HHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEe--eCCCCCCchhhhhhccc
Q psy6201 44 RDIFSVYRDQAASTALHCLLKC-YALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIR--KKGKLPGVVERLEYGLE 120 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~-~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vR--K~~k~~g~~~~~~~~~~ 120 (220)
+|++.+-..+..++.++.+|++ ..+....++|+|+|+++.|+|+|+++|+.||+.|...+ |.+++-+
T Consensus 56 i~W~siG~s~sRl~~Is~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~---------- 125 (203)
T COG0856 56 IDWRSIGKSGSRLRYISEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEG---------- 125 (203)
T ss_pred EechhhccchHHHHHHHHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEeccccccccc----------
Confidence 8999999999999999999999 45554679999999999999999999999999986665 3333322
Q ss_pred cceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEE
Q psy6201 121 YGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECF 196 (220)
Q Consensus 121 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~ 196 (220)
.-..++.|..|+ -..|+|++||||+++|| .+++.+++.|++.+.|.
T Consensus 126 --------------------~~~~G~iS~NFa----------~V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~ 175 (203)
T COG0856 126 --------------------AGKGGSISSNFA----------SVEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVV 175 (203)
T ss_pred --------------------CCcCceeecccc----------cccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEE
Confidence 111233344442 13699999999999999 88999999999999999
Q ss_pred EEEEecCcCCceeec-eeeEEeee
Q psy6201 197 AVMELKDLNGRQKVP-SKVVSLLE 219 (220)
Q Consensus 197 vli~~~~~~g~~~l~-~~v~sL~~ 219 (220)
+++++. |.+.+. +|+.||++
T Consensus 176 VL~dK~---G~dei~gvPi~sLlr 196 (203)
T COG0856 176 VLADKK---GVDEIEGVPVESLLR 196 (203)
T ss_pred EEEccC---CcccccCcchHHhhe
Confidence 999986 677777 99999975
No 25
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=99.68 E-value=9.6e-16 Score=118.60 Aligned_cols=120 Identities=24% Similarity=0.273 Sum_probs=92.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccC
Q psy6201 48 SVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDI 127 (220)
Q Consensus 48 ~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~ 127 (220)
+++.+|+.+..+++.+++++.+.+.++|.|+|++++|+++|..+|..++.|+++.++...... ..
T Consensus 2 ~i~~~~~~~~~~~~~la~~i~~~~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~---------~~------ 66 (125)
T PF00156_consen 2 KIILSPEQIEALAERLAEQIKESGFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYP---------GS------ 66 (125)
T ss_dssp EEEEBHHHHHHHHHHHHHHHHHHTTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEES---------EE------
T ss_pred EEEEcHHHHHHHHHHHHHHHHHhCCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccc---------cc------
Confidence 467799999999999999999977788899999999999999999999999988776521100 00
Q ss_pred CccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 128 PFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
... ...-....+........+|++||||||+++|| +++++++++|++++++++++
T Consensus 67 -------------~~~----~~~~~~~~~~~~~~~~~~gk~vliVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~ 125 (125)
T PF00156_consen 67 -------------DKT----SREKNNQELFIIDKEDIKGKRVLIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV 125 (125)
T ss_dssp -------------EEE----EEETEEEEEEEEESSSGTTSEEEEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred -------------hhh----hhccCceEEeecccccccceeEEEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 000 00000012223345567899999999999999 78899999999999998875
No 26
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=99.27 E-value=5.4e-11 Score=97.91 Aligned_cols=111 Identities=16% Similarity=0.160 Sum_probs=76.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEE-EeeCCCCCCchhhhhhccccceeccC
Q psy6201 49 VYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVP-IRKKGKLPGVVERLEYGLEYGTVLDI 127 (220)
Q Consensus 49 ~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~-vRK~~k~~g~~~~~~~~~~~~~v~~~ 127 (220)
++.+.+.+...+..|+..+.+.+ ++|+|+|++.||+++|+.++.+|++|++- ++-.. +..
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~-~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~ss-Y~~----------------- 68 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG-QWKGIIAVTRGGLVPAAILARELGIRLVDTVCISS-YDH----------------- 68 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC-CCCEEEEEecCCeehHHHHHHHcCCCceeEEEEEE-ECC-----------------
Confidence 34688999999999999998743 68999999999999999999999999752 22110 000
Q ss_pred CccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCChHHHHHHhcCCeEEEEEEEEEec
Q psy6201 128 PFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATGASCQLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TGa~i~ll~~~Ga~v~~v~vli~~~ 202 (220)
+ .+..+++..+...+|++||||||+++||.+++.+.+.=.+ +..++++.+.
T Consensus 69 ----------------------~-~~~~~~~~~~~~~~gk~VLIVDDIiDTG~Tl~~v~~~l~~-v~~a~l~~K~ 119 (156)
T PRK09177 69 ----------------------D-NQGELKVLKRAEGDGEGFLVVDDLVDTGGTARAVREMYPK-AHFATVYAKP 119 (156)
T ss_pred ----------------------C-cCCcEEEecCCCcCcCEEEEEeeeeCCHHHHHHHHHHHhh-CCEEEEEECc
Confidence 0 0112333333446899999999999999333332222112 3467777776
No 27
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=99.18 E-value=4.2e-10 Score=95.35 Aligned_cols=118 Identities=21% Similarity=0.209 Sum_probs=84.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcC-CCccEEEeecccCcchHHHHhhhcCC---Ce--EEEeeCCCCCCchhhhhhccc
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSLK-DKIDVVYAIESRGFLFGPYIGQVLDI---PF--VPIRKKGKLPGVVERLEYGLE 120 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~~-~~~D~Ivgie~~Gi~la~~lA~~lg~---p~--V~vRK~~k~~g~~~~~~~~~~ 120 (220)
..++.+.+.++.....|++.+.+.. ...++|+|+..||+++|..++..++. |+ -++|.+....+
T Consensus 8 ~~~lis~~~I~~~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~---------- 77 (189)
T PLN02238 8 EKVLWTAEDISARVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGG---------- 77 (189)
T ss_pred cEEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCC----------
Confidence 3556677777777777888877631 25699999999999999999999998 65 35665421111
Q ss_pred cceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEec---CCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEE
Q psy6201 121 YGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQK---DGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVV 193 (220)
Q Consensus 121 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~---~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~ 193 (220)
... +..+.+.. .....|++||||||+++|| .+++.+++.|++.+
T Consensus 78 --------------------~~~---------~g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v 128 (189)
T PLN02238 78 --------------------TES---------SGVAKVSGADLKIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASV 128 (189)
T ss_pred --------------------ccc---------cCceeEecCCCCCCCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEE
Confidence 000 00111111 1235899999999999999 67788889999999
Q ss_pred EEEEEEEecC
Q psy6201 194 ECFAVMELKD 203 (220)
Q Consensus 194 ~v~vli~~~~ 203 (220)
.+++++++..
T Consensus 129 ~~avL~dK~~ 138 (189)
T PLN02238 129 SVCALLDKRA 138 (189)
T ss_pred EEEEEEECCc
Confidence 9999999873
No 28
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.15 E-value=7.7e-10 Score=92.90 Aligned_cols=117 Identities=17% Similarity=0.173 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc-CCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhcccccee
Q psy6201 48 SVYRDQAASTALHCLLKCYALSL-KDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTV 124 (220)
Q Consensus 48 ~~l~~p~~~~~l~~~la~~~~~~-~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v 124 (220)
+.+.+.+.+....+.|+.++.+. ....++|+++..+|+++|..+|..+++|+. ++++.. ..+
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~-~~~-------------- 78 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATR-YRN-------------- 78 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEe-cCC--------------
Confidence 45567888888888888888763 234579999999999999999999999852 333322 111
Q ss_pred ccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEE
Q psy6201 125 LDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~ 200 (220)
..... .. ...+.......|++||||||+++|| ++.+.+++.|+.-+.++++++
T Consensus 79 ----------------~~~~~--~~-----~~~~~~~~~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~~ 135 (181)
T PRK09162 79 ----------------ETTGG--EL-----VWKVKPRESLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSAVLVD 135 (181)
T ss_pred ----------------CccCC--ce-----eEecCCCCCCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEEEEEE
Confidence 00000 00 0111112235899999999999999 777889999999999999999
Q ss_pred ec
Q psy6201 201 LK 202 (220)
Q Consensus 201 ~~ 202 (220)
+.
T Consensus 136 k~ 137 (181)
T PRK09162 136 KT 137 (181)
T ss_pred cC
Confidence 86
No 29
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=99.10 E-value=2.2e-09 Score=89.04 Aligned_cols=116 Identities=19% Similarity=0.143 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhc-CCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceecc
Q psy6201 50 YRDQAASTALHCLLKCYALSL-KDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLD 126 (220)
Q Consensus 50 l~~p~~~~~l~~~la~~~~~~-~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~ 126 (220)
+.+.+.++.....|++++.+. +.+.++|+++..||+++|..++..|++|.. +++-+.-... .
T Consensus 2 lis~~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~------------~--- 66 (166)
T TIGR01203 2 LIPEEQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNG------------M--- 66 (166)
T ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCC------------C---
Confidence 346778888888888888763 125789999999999999999999998742 3332200000 0
Q ss_pred CCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEec
Q psy6201 127 IPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~ 202 (220)
+..+ .. ........-..|++||||||+++|| ++++.+++.|++.+.+++++++.
T Consensus 67 ------~~~~----~~------------~~~~~~~~~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~k~ 124 (166)
T TIGR01203 67 ------QSSG----DV------------KILKDLDLSIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLKIVTLLDKP 124 (166)
T ss_pred ------cccC----ce------------EEecCCCCCCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEecC
Confidence 0000 00 0111112234699999999999999 77788889999999999999986
No 30
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=99.03 E-value=1.2e-09 Score=92.99 Aligned_cols=55 Identities=22% Similarity=0.246 Sum_probs=48.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCC-CeEEEe
Q psy6201 49 VYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDI-PFVPIR 103 (220)
Q Consensus 49 ~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~-p~V~vR 103 (220)
.+-..+.++.++..+|+++.+++..||+|+++++||+.+|..++..||+ |+..+.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~ 60 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGVKPLYSIK 60 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCCCceEEEE
Confidence 3446788999999999999988889999999999999999999999998 565554
No 31
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.00 E-value=2.8e-09 Score=95.45 Aligned_cols=107 Identities=23% Similarity=0.223 Sum_probs=76.1
Q ss_pred HHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCC
Q psy6201 60 HCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLP 139 (220)
Q Consensus 60 ~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (220)
+..+++++... .+..+|++++.||+++|..+|..+|+|+.+++|.+..+.
T Consensus 142 ~~~la~~i~~~-~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~----------------------------- 191 (285)
T PRK00934 142 APLIAEYIGDK-LDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPT----------------------------- 191 (285)
T ss_pred HHHHHHHHHhc-CCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCC-----------------------------
Confidence 45555555431 234489999999999999999999999999988643222
Q ss_pred ceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEecCcCCceee
Q psy6201 140 GVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELKDLNGRQKV 210 (220)
Q Consensus 140 ~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~~~~g~~~l 210 (220)
.. .+. ....-.+|++|+||||+++|| ++.+.+++.||+.+.++++......++.+++
T Consensus 192 -~~------------~~~-~~~~~v~Gk~VlIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~~~H~i~~~~a~~~l 252 (285)
T PRK00934 192 -EV------------EIA-PKNLDVKGKDVLIVDDIISTGGTMATAIKILKEQGAKKVYVACVHPVLVGDAILKL 252 (285)
T ss_pred -eE------------EEe-ccccccCCCEEEEEcCccccHHHHHHHHHHHHHCCCCEEEEEEEeeccCcHHHHHH
Confidence 00 010 011124799999999999999 7778999999999998887654433344444
No 32
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.99 E-value=1.4e-09 Score=93.58 Aligned_cols=130 Identities=27% Similarity=0.260 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhhcC-CCccEEEeecccCcchHHHHhhhcCCCe--EEEeeCCCCCCchhhhhhccccceeccCCccccc
Q psy6201 57 TALHCLLKCYALSLK-DKIDVVYAIESRGFLFGPYIGQVLDIPF--VPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIR 133 (220)
Q Consensus 57 ~~l~~~la~~~~~~~-~~~D~Ivgie~~Gi~la~~lA~~lg~p~--V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~ 133 (220)
...++.|++.+...- .+.-+|++++.||+|.|..+|..||.|+ +++||-+ .|+ +.+++.|+|.+++-+..|
T Consensus 8 ~dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG-~P~-----n~E~aiGAvae~g~~v~n 81 (220)
T COG1926 8 TDAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIG-APG-----NPELAIGAVAEGGDVVLN 81 (220)
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecC-CCC-----CchhceeeeccCCcEecc
Confidence 355666666666521 1233899999999999999999999996 7889987 577 889999999999965555
Q ss_pred cCCCCCceeeeeeeeeeeeceE-----EE-------Eec-CCC--CCCCEEEEEecccCCC----hHHHHHHhcCCeEEE
Q psy6201 134 KKGKLPGVVERLEYGLEYGTDC-----IE-------VQK-DGG--KAGKKALIVDDLIATG----ASCQLLTTLGVDVVE 194 (220)
Q Consensus 134 ~~~~~~~~~~~~~~~~~y~~~~-----le-------~~~-~~l--~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~ 194 (220)
.. ...+...+.+|-... .| ++. ..+ .+|+.|+||||-++|| ++++.+++.++.-+-
T Consensus 82 ~~-----~~~~~~i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~Iv 156 (220)
T COG1926 82 YD-----VVRSLGIDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIV 156 (220)
T ss_pred hh-----hhhhccCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEE
Confidence 33 222222222331100 11 222 222 5899999999999999 788888888876544
Q ss_pred EEE
Q psy6201 195 CFA 197 (220)
Q Consensus 195 v~v 197 (220)
+++
T Consensus 157 iAV 159 (220)
T COG1926 157 IAV 159 (220)
T ss_pred EEc
Confidence 333
No 33
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=98.97 E-value=1.6e-08 Score=84.99 Aligned_cols=120 Identities=16% Similarity=0.129 Sum_probs=82.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCC---CccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhcccc
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSLKD---KIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEY 121 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~~~---~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~ 121 (220)
..++.+.+.++.....++..+.+... .-.+++|+..||+++|..++..++.|.. +++...-..+
T Consensus 5 ~~~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~----------- 73 (178)
T PRK15423 5 VEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSG----------- 73 (178)
T ss_pred eEEecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCC-----------
Confidence 34566777788777777777765311 2369999999999999999999999843 5554321011
Q ss_pred ceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 122 GTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 122 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
...+ +.-.+......-..|++||||||++.|| ++.+.+++.|+..+.+++
T Consensus 74 -------------------~~~~-------~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~~v~~av 127 (178)
T PRK15423 74 -------------------MSTT-------RDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICT 127 (178)
T ss_pred -------------------Cccc-------CceEEecCCCCCCCCCEEEEEeeecCchHHHHHHHHHHHhCCCCEEEEEE
Confidence 0000 0001111112235799999999999999 666778889999999999
Q ss_pred EEEecC
Q psy6201 198 VMELKD 203 (220)
Q Consensus 198 li~~~~ 203 (220)
++++..
T Consensus 128 L~~K~~ 133 (178)
T PRK15423 128 LLDKPS 133 (178)
T ss_pred EEECCC
Confidence 999973
No 34
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=98.93 E-value=9.9e-09 Score=92.78 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=72.5
Q ss_pred HHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCC
Q psy6201 60 HCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLP 139 (220)
Q Consensus 60 ~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (220)
...|++++... .+-++|++++.||..++..+|..+|+|+++++|.++...
T Consensus 148 ~~~la~~l~~~-~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~----------------------------- 197 (301)
T PRK07199 148 APAIAAWIRAH-VPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDR----------------------------- 197 (301)
T ss_pred HHHHHHHHHhc-CCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCC-----------------------------
Confidence 34444455432 245689999999999999999999999999988653221
Q ss_pred ceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEec
Q psy6201 140 GVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 140 ~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~ 202 (220)
.. .+....+...+|++|+||||+++|| .+.+.+++.||+.+.+++....-
T Consensus 198 -~~------------~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgvf 251 (301)
T PRK07199 198 -DV------------EISLPDAAPWAGRTPVLVDDIVSTGRTLIEAARQLRAAGAASPDCVVVHALF 251 (301)
T ss_pred -eE------------EEEeccCcccCCCEEEEEecccCcHHHHHHHHHHHHHCCCcEEEEEEEeeeC
Confidence 00 0111122234799999999999999 77799999999988888776543
No 35
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.93 E-value=7.8e-09 Score=93.73 Aligned_cols=98 Identities=20% Similarity=0.245 Sum_probs=73.2
Q ss_pred HHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCc
Q psy6201 61 CLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPG 140 (220)
Q Consensus 61 ~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (220)
..+++++...+.+..+|++++.||+++|..+|..+|+|+.+++|.++.++
T Consensus 146 ~~l~~~i~~~~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~------------------------------ 195 (309)
T PRK01259 146 PILLEDIKQKNLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRAN------------------------------ 195 (309)
T ss_pred HHHHHHHHhcCCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeecccce------------------------------
Confidence 44555555433566799999999999999999999999999988754322
Q ss_pred eeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 141 VVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 141 ~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
... ...+. +. .+|++|+||||+++|| ++++.+++.|++.+.+++....
T Consensus 196 ~~~-----------~~~~~-~~-~~g~~vliVDDii~TG~T~~~a~~~l~~~Ga~~v~~~~tH~i 247 (309)
T PRK01259 196 VSE-----------VMNII-GD-VEGRDCILVDDMIDTAGTLCKAAEALKERGAKSVYAYATHPV 247 (309)
T ss_pred eEE-----------EEeec-cc-CCCCEEEEEecccCcHHHHHHHHHHHHccCCCEEEEEEEeee
Confidence 100 11111 12 4799999999999999 7778899999999988886433
No 36
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=98.89 E-value=4.1e-08 Score=81.90 Aligned_cols=119 Identities=18% Similarity=0.162 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc--CCCccEEEeecccCcchHHHHhhhc----CCC--eEEEeeCCCCCCchhhhhhcc
Q psy6201 48 SVYRDQAASTALHCLLKCYALSL--KDKIDVVYAIESRGFLFGPYIGQVL----DIP--FVPIRKKGKLPGVVERLEYGL 119 (220)
Q Consensus 48 ~~l~~p~~~~~l~~~la~~~~~~--~~~~D~Ivgie~~Gi~la~~lA~~l----g~p--~V~vRK~~k~~g~~~~~~~~~ 119 (220)
..+.+++.+......++..+.+. +...++|+++..||+++|..++..+ +.| +.+++......+.
T Consensus 4 ~~l~s~~~i~~~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~-------- 75 (176)
T PRK05205 4 KEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDL-------- 75 (176)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCc--------
Confidence 45568889999999999888763 2257899999999999999999999 543 3333321000000
Q ss_pred ccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEE-ecCCCCCCCEEEEEecccCCC----hHHHHHHhcC-CeEE
Q psy6201 120 EYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEV-QKDGGKAGKKALIVDDLIATG----ASCQLLTTLG-VDVV 193 (220)
Q Consensus 120 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~-~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~G-a~v~ 193 (220)
++.+ .. ..... ....-..|++||||||+++|| .+++.+++.| +..+
T Consensus 76 -------------~~~~----~~-----------~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v 127 (176)
T PRK05205 76 -------------TKKG----LH-----------PQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARV 127 (176)
T ss_pred -------------cccC----cc-----------cccccccCCCCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCcEE
Confidence 0000 00 00000 001124799999999999999 6778888998 6778
Q ss_pred EEEEEEEec
Q psy6201 194 ECFAVMELK 202 (220)
Q Consensus 194 ~v~vli~~~ 202 (220)
.+++++++.
T Consensus 128 ~~avL~~K~ 136 (176)
T PRK05205 128 QLAVLVDRG 136 (176)
T ss_pred EEEEEEECC
Confidence 889999874
No 37
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.83 E-value=3.2e-08 Score=90.20 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhcCC--CccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccC
Q psy6201 58 ALHCLLKCYALSLKD--KIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKK 135 (220)
Q Consensus 58 ~l~~~la~~~~~~~~--~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (220)
.....+++++...+. .-.+|++++.||+.+|..+|..+|+|+.+++|+++... .
T Consensus 148 ~~~p~l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~------------------------~ 203 (320)
T PRK02269 148 MGAPLIADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDK------------------------M 203 (320)
T ss_pred hhHHHHHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCC------------------------C
Confidence 445566666654322 33489999999999999999999999999887642110 0
Q ss_pred CCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 136 GKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 136 ~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
.. . ....+ .+. .+|++|+||||+++|| .+.+.+++.||+.+.+++....
T Consensus 204 -----~~-----~-----~~~~~-~gd-v~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgl 256 (320)
T PRK02269 204 -----NT-----S-----EVMNI-IGN-VKGKKCILIDDMIDTAGTICHAADALAEAGATEVYASCTHPV 256 (320)
T ss_pred -----ce-----e-----EEEEe-ccc-cCCCEEEEEeeecCcHHHHHHHHHHHHHCCCCEEEEEEECcc
Confidence 00 0 01111 122 3799999999999999 7789999999999987776644
No 38
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=98.82 E-value=3.4e-08 Score=89.36 Aligned_cols=86 Identities=27% Similarity=0.341 Sum_probs=65.9
Q ss_pred CccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeee
Q psy6201 73 KIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYG 152 (220)
Q Consensus 73 ~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 152 (220)
+.++|++++.+|+++|..+|..+|+|+.+++|.++.+. + +. ..
T Consensus 159 ~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~-----------~------------------~~-------~~- 201 (308)
T TIGR01251 159 DNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISAT-----------N------------------EV-------EV- 201 (308)
T ss_pred CCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCC-----------C------------------EE-------EE-
Confidence 45799999999999999999999999999988754221 0 10 00
Q ss_pred ceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEE
Q psy6201 153 TDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 153 ~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~ 200 (220)
. ......+|++|+||||+++|| .+++.+++.|++.+.+++...
T Consensus 202 ---~--~~~~~v~g~~vliVDDii~tG~Tl~~a~~~l~~~ga~~v~~~~th~ 248 (308)
T TIGR01251 202 ---M--NLVGDVEGKDVVIVDDIIDTGGTIAKAAEILKSAGAKRVIAAATHG 248 (308)
T ss_pred ---E--ecccccCCCEEEEEccccCCHHHHHHHHHHHHhcCCCEEEEEEEee
Confidence 0 011224799999999999999 778999999999888777654
No 39
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=98.79 E-value=1.8e-08 Score=96.78 Aligned_cols=111 Identities=23% Similarity=0.266 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.|++... .++|+|++++..|+++|..+|..+|+|+. .+|.+ ..+ -.++ .|...
T Consensus 296 ~~R~~~G~~La~~~~---~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~--y~g----------rtfi--~p~q~ 358 (500)
T PRK07349 296 SYRQRLGQQLAKESP---VDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNR--YVG----------RTFI--QPTQS 358 (500)
T ss_pred HHHHHHHHHHhhhcc---cCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEe--ccC----------cccc--CCCHH
Confidence 556688888886554 47999999999999999999999999985 34432 221 0000 01111
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
.|+.. . . ..+. +.....+|+|||||||+++|| +++++|+++||+.+.+.+
T Consensus 359 ~R~~~-----~-------~---~kl~-~~~~~~~gkrVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i 412 (500)
T PRK07349 359 MRESG-----I-------R---MKLN-PLKDVLAGKRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRI 412 (500)
T ss_pred HHHhh-----h-------h---eeee-ccccccCCCEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEe
Confidence 11110 0 0 0111 112334799999999999999 778999999999887543
No 40
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=98.78 E-value=1.3e-07 Score=81.79 Aligned_cols=116 Identities=11% Similarity=0.123 Sum_probs=78.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCC-------CccEEEeecccCcchHHHHhhhcC---CCe--EEEeeCCCCCCchhhh
Q psy6201 48 SVYRDQAASTALHCLLKCYALSLKD-------KIDVVYAIESRGFLFGPYIGQVLD---IPF--VPIRKKGKLPGVVERL 115 (220)
Q Consensus 48 ~~l~~p~~~~~l~~~la~~~~~~~~-------~~D~Ivgie~~Gi~la~~lA~~lg---~p~--V~vRK~~k~~g~~~~~ 115 (220)
.++.+.+.+....+.||..+.+... +.++++|+..||+++|.-|+..|+ .|+ -+++-.. +..
T Consensus 25 ~~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vss-Y~~----- 98 (211)
T PTZ00271 25 HTLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASS-YGT----- 98 (211)
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEe-cCC-----
Confidence 3456888888777777777776322 367899999999999999999996 552 2222111 000
Q ss_pred hhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEE--ecCCCCCCCEEEEEecccCCC----hHHHHHHhcC
Q psy6201 116 EYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEV--QKDGGKAGKKALIVDDLIATG----ASCQLLTTLG 189 (220)
Q Consensus 116 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~--~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~G 189 (220)
+ .. . +..+.+ ....-..|++||||||++.|| ++++.+++.|
T Consensus 99 ------~------------------~~-------s--~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~ 145 (211)
T PTZ00271 99 ------G------------------VE-------T--SGQVRMLLDVRDSVENRHILIVEDIVDSAITLQYLMRFMLAKK 145 (211)
T ss_pred ------C------------------Cc-------c--cCceEEecCCCCCCCCCEEEEEecccCCHHHHHHHHHHHHhcC
Confidence 0 00 0 001111 112235799999999999999 6667778889
Q ss_pred CeEEEEEEEEEec
Q psy6201 190 VDVVECFAVMELK 202 (220)
Q Consensus 190 a~v~~v~vli~~~ 202 (220)
+.-+-+++++++.
T Consensus 146 p~svk~avL~dK~ 158 (211)
T PTZ00271 146 PASLKTVVLLDKP 158 (211)
T ss_pred CCEEEEEEEEEcc
Confidence 9888899999996
No 41
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=98.74 E-value=4.7e-08 Score=92.72 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCe--EEEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPF--VPIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~--V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.|++.+.. ..|.|+.++.+|++.|..+|..+|+|+ .++||+..... .+. +...
T Consensus 259 ~~R~~~G~~La~~~~~---~~d~Vv~vPd~g~~~A~~~A~~lgip~~~~l~rk~~~~r~-------~i~-------~~qr 321 (445)
T PRK08525 259 EVRKKMGEELAKKFPI---KADFVVPVPDSGVPAAIGYAQESGIPFEMAIVRNHYVGRT-------FIE-------PTQE 321 (445)
T ss_pred HHHHHHHHHHHHHhcc---cCCeEEECCchHHHHHHHHHHHhCCCccceEEEeeccccc-------cCC-------HHHH
Confidence 4556888999988764 789999999999999999999999997 56776421000 000 0000
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEe-cCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQ-KDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~-~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~ 200 (220)
.+ ++ . ....+. .....+|++|+||||+++|| +++++|+++||+-+.+.+..-
T Consensus 322 ~r-------n~-----~-----~~~~~~~~~~~v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp 378 (445)
T PRK08525 322 MR-------NL-----K-----VKLKLNPMSKVLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACP 378 (445)
T ss_pred HH-------hh-----h-----eeEEecccccccCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECC
Confidence 00 00 0 011111 12235799999999999999 777899999999877666543
No 42
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.73 E-value=1.3e-07 Score=86.77 Aligned_cols=83 Identities=30% Similarity=0.348 Sum_probs=64.7
Q ss_pred cEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeece
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTD 154 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 154 (220)
-+|++++.+|+..|..+|..+|+|+++++|++.... .. .
T Consensus 170 ~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~------------------------------~~--~--------- 208 (332)
T PRK00553 170 LVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHN------------------------------VA--E--------- 208 (332)
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcc------------------------------eE--e---------
Confidence 389999999999999999999999999998753221 00 0
Q ss_pred EEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEE
Q psy6201 155 CIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 155 ~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~ 200 (220)
.+.+. +. .+|++|+||||+++|| .+.+.++++||+.+.+++...
T Consensus 209 ~~~~~-gd-v~Gk~VIIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~atHg 256 (332)
T PRK00553 209 SINVL-GE-VKNKNCLIVDDMIDTGGTVIAAAKLLKKQKAKKVCVMATHG 256 (332)
T ss_pred eEEee-cc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCcEEEEEEEee
Confidence 11111 22 3799999999999999 777889999999999888443
No 43
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.66 E-value=1.7e-07 Score=89.80 Aligned_cols=110 Identities=25% Similarity=0.265 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
++...+++.|++... .++|+|++++.+|+++|..+|..+|+|+. ++|++ ..+ -.+++ |...
T Consensus 279 ~~R~~~g~~La~~~~---~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~--y~g----------rt~i~--~~q~ 341 (479)
T PRK09123 279 EVRKNIGRELARESP---VDADVVVPVPDSGVPAAIGYAQESGIPFELGIIRNH--YVG----------RTFIQ--PTQQ 341 (479)
T ss_pred HHHHHHHHHHHHhCC---CCCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEEe--ecC----------ccccc--cccc
Confidence 667788888887765 37999999999999999999999999985 56653 111 00000 0000
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEe-cCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQ-KDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~-~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
.|+. .. .+... .....+|++||||||+++|| ++++.++++||+-+.+++
T Consensus 342 ~r~~------------~v-----~~k~~~~~~~~~gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~ 395 (479)
T PRK09123 342 IRNL------------GV-----KLKHNANRAVIEGKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRI 395 (479)
T ss_pred cccc------------cE-----EEEecccccccCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEE
Confidence 0000 00 11111 12335799999999999999 777899999999888665
No 44
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=98.65 E-value=5.3e-08 Score=93.03 Aligned_cols=111 Identities=21% Similarity=0.234 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.||+... .++|+|++++..|+++|..+|..+|+|+. .+|++. ...+ +. .|...
T Consensus 267 ~~R~~~G~~La~~~~---~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~-~~rt-----------~~--~~~~~ 329 (471)
T PRK06781 267 AARKNMGKRLAAEAP---IEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRY-VGRT-----------FI--QPSQE 329 (471)
T ss_pred HHHHHHHHHHhhhCC---CCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEcc-CCCC-----------Cc--CCCHH
Confidence 566689999998665 47999999999999999999999999985 344321 1110 00 00011
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
.|+. .+ +..+... ....+|+||+||||+++|| +++++|+++||+-+.+.+
T Consensus 330 ~R~~-----~v----------~~~f~~~-~~~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i 383 (471)
T PRK06781 330 LREQ-----GV----------KMKLSAV-RGVVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRI 383 (471)
T ss_pred HHHH-----HH----------hcceecc-ccccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEE
Confidence 1100 00 0122221 2345799999999999999 777899999999887544
No 45
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=98.63 E-value=1.5e-07 Score=89.88 Aligned_cols=111 Identities=19% Similarity=0.219 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEE--EeeCCCCCCchhhhhhccccceeccCCcccc
Q psy6201 55 ASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVP--IRKKGKLPGVVERLEYGLEYGTVLDIPFVPI 132 (220)
Q Consensus 55 ~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~--vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~ 132 (220)
....+++.|++... .+.|+|++++.+|+++|..+|..+|+|+.. +|.+ ..+ .-++ .|....
T Consensus 273 ~R~~~G~~La~~~~---~~~D~Vv~vPdsg~~~A~~~A~~lgip~~~~l~r~~--~~~----------rtfi--~~~q~~ 335 (469)
T PRK05793 273 SRVRAGRQLYKEYP---VDADIVIGVPDSGIPAAIGYAEASGIPYGIGFIKNK--YVG----------RTFI--APSQEL 335 (469)
T ss_pred HHHHHHHHHHHhcC---CCCCEEEEcCccHHHHHHHHHHHhCCCEeeeEEEee--ecc----------cccc--ChhHhh
Confidence 34488999998776 378999999999999999999999999843 3433 111 0000 011111
Q ss_pred ccCCCCCceeeeeeeeeeeeceEEEE-ecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 133 RKKGKLPGVVERLEYGLEYGTDCIEV-QKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~y~~~~le~-~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
|... ..+.+ +.....+|++|+||||+++|| +++++|+++||+-+.+.+..
T Consensus 336 R~~~-----------------~~~k~~~~~~~v~gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~ 390 (469)
T PRK05793 336 RERA-----------------VRVKLNPLKVNVEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSS 390 (469)
T ss_pred hhhh-----------------heEecccCccccCCCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEEC
Confidence 1100 01111 111224799999999999999 77799999999988866543
No 46
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=98.63 E-value=3.7e-07 Score=80.39 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=83.3
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhc-CCCccEEEeecccCcchHHHHhhhcCC---------C--e---EEEeeCCCC
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALSL-KDKIDVVYAIESRGFLFGPYIGQVLDI---------P--F---VPIRKKGKL 108 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~~-~~~~D~Ivgie~~Gi~la~~lA~~lg~---------p--~---V~vRK~~k~ 108 (220)
-++..++.+.+.++.-.+.||..+.+. +....+|+|+-.||++|+.-|...++. | + -+++-+
T Consensus 51 ~~~~~vLis~~~I~~rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vs--- 127 (241)
T PTZ00149 51 NYLTKILLPNGLIKDRVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVK--- 127 (241)
T ss_pred ccccEEEeCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEE---
Confidence 345677778888888888888888864 335669999999999999999888862 1 1 112211
Q ss_pred CCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecC--CCCCCCEEEEEecccCCC----hHH
Q psy6201 109 PGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKD--GGKAGKKALIVDDLIATG----ASC 182 (220)
Q Consensus 109 ~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~--~l~~G~rVLIVDDvi~TG----a~i 182 (220)
+|.-...+..+.+... .-..|++||||||+++|| +++
T Consensus 128 -------------------------------------SY~~~~s~g~v~i~~~~~~~l~gk~VLIVDDIidTG~Tl~~~~ 170 (241)
T PTZ00149 128 -------------------------------------SYCNDESTGKLEIVSDDLSCLKDKHVLIVEDIIDTGNTLVKFC 170 (241)
T ss_pred -------------------------------------EccCCCcCCceEEecccccccCCCEEEEEEeEeChHHHHHHHH
Confidence 0100000011222111 125899999999999999 777
Q ss_pred HHHHhcCCeEEEEEEEEEecC
Q psy6201 183 QLLTTLGVDVVECFAVMELKD 203 (220)
Q Consensus 183 ~ll~~~Ga~v~~v~vli~~~~ 203 (220)
+.+++.|++-+-+++++++..
T Consensus 171 ~~L~~~g~~~V~va~L~~K~~ 191 (241)
T PTZ00149 171 EYLKKFEPKTIRIATLFEKRT 191 (241)
T ss_pred HHHHhcCCCEEEEEEEEecCc
Confidence 888899999999999998873
No 47
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=98.62 E-value=3.6e-07 Score=85.27 Aligned_cols=92 Identities=22% Similarity=0.269 Sum_probs=67.1
Q ss_pred CccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeee
Q psy6201 73 KIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYG 152 (220)
Q Consensus 73 ~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 152 (220)
+..+|++++.||+..|..+|..+|+|+++++|++.... .... +..
T Consensus 207 ~~~VVVsPD~Gg~~rA~~~A~~Lg~~~ai~~K~R~~~~------------------------------~~~g-~~~---- 251 (382)
T PRK06827 207 DHLMVISPDTGAMDRAKYYASVLGVDLGLFYKRRDYSR------------------------------VVNG-RNP---- 251 (382)
T ss_pred CCcEEEEECccchHHHHHHHHHhCCCEEEEEcccCCcc------------------------------cccC-CCc----
Confidence 45689999999999999999999999999998753211 0000 000
Q ss_pred ceEEEEec-CCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 153 TDCIEVQK-DGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 153 ~~~le~~~-~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
...+.. +.-..|++|+||||+++|| .+++.+++.||+-+-+++....
T Consensus 252 --~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa~~Lk~~GA~~V~~~~tH~v 303 (382)
T PRK06827 252 --IVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGF 303 (382)
T ss_pred --eEEEecCCcccCCCEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEEEEeec
Confidence 011111 2124799999999999999 7778899999998887777654
No 48
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.58 E-value=6.7e-07 Score=81.60 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=65.6
Q ss_pred CccEEEeecccCcchHHHHhhhcC-CCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeee
Q psy6201 73 KIDVVYAIESRGFLFGPYIGQVLD-IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEY 151 (220)
Q Consensus 73 ~~D~Ivgie~~Gi~la~~lA~~lg-~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y 151 (220)
+--+|+++..||...|..+|..++ +|+++..|+++... .. .
T Consensus 166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~------------------------------~~--~------ 207 (319)
T PRK04923 166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRAN------------------------------VA--T------ 207 (319)
T ss_pred CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCC------------------------------ce--E------
Confidence 334899999999999999999998 89999988753222 00 0
Q ss_pred eceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 152 GTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 152 ~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
...+ .+. .+|++|+||||+++|| .+.+.+++.||..+.+++....
T Consensus 208 ---~~~~-~gd-v~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~THgv 256 (319)
T PRK04923 208 ---VMNI-IGD-VQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKVVAYITHPV 256 (319)
T ss_pred ---EEec-ccC-CCCCEEEEEecccCchHHHHHHHHHHHHCCCCEEEEEEECcc
Confidence 0111 122 4799999999999999 7789999999999887776543
No 49
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.53 E-value=5.2e-07 Score=82.44 Aligned_cols=83 Identities=25% Similarity=0.324 Sum_probs=62.9
Q ss_pred cEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeece
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTD 154 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 154 (220)
-+|+++..||..+|..+|..+|+|+.++++.+.... . +. .
T Consensus 171 ~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~------------------------------~--------~~--~ 210 (323)
T PRK02458 171 VVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSE------------------------------R--------EE--G 210 (323)
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCc------------------------------c--------ee--e
Confidence 489999999999999999999999988886532111 0 00 0
Q ss_pred EEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 155 CIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 155 ~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
.+ .+. .+|++|+||||+++|| .+.+.+++.||+-+-+++....
T Consensus 211 ~i---~gd-V~gk~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgi 257 (323)
T PRK02458 211 YI---IGD-VAGKKAILIDDILNTGKTFAEAAKIVEREGATEIYAVASHGL 257 (323)
T ss_pred cc---ccc-cCCCEEEEEcceeCcHHHHHHHHHHHHhCCCCcEEEEEEChh
Confidence 11 122 3799999999999999 7778999999998887766543
No 50
>PLN02440 amidophosphoribosyltransferase
Probab=98.52 E-value=4.6e-07 Score=86.72 Aligned_cols=112 Identities=20% Similarity=0.239 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
.....+++.|++.+.. ++|+|++++.+|+++|..+|..+|+|+. ++|.+ ..+ . .++.
T Consensus 259 ~~r~~~g~~La~~~~~---~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~r--y~~----------r------t~i~ 317 (479)
T PLN02440 259 ESRLEFGEILATEIPV---DCDVVIPVPDSGRVAALGYAAKLGVPFQQGLIRSH--YVG----------R------TFIE 317 (479)
T ss_pred HHHHHHHHHHHHhcCC---CCCEEEEeCCcHHHHHHHHHHHhCCCchhheEEEe--ecc----------c------cccC
Confidence 3444677888877753 7999999999999999999999999974 45533 111 0 0000
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEec-CCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQK-DGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~-~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
..+ .. .-+.....+.. ....+|++||||||+++|| +++++|+++|++.+.++++.
T Consensus 318 ~~q------~~-------r~~~~~~k~~~~~~~v~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~ 377 (479)
T PLN02440 318 PSQ------KI-------RDFSVKLKLNPVRSVLEGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS 377 (479)
T ss_pred cch------hh-------hhhhheeeeecccccccCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence 000 00 00000111111 1225799999999999999 77788999999999877775
No 51
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=98.51 E-value=1.8e-07 Score=88.58 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.|++... .++|+|+.++..|++.|..+|..+|+|+. ++|++ ..+ ..++ .|...
T Consensus 257 ~~R~~~g~~La~~~~---~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~l~r~~--~~~----------r~~i--~~~q~ 319 (442)
T TIGR01134 257 KARKRMGEKLARESP---VEADVVIPVPDSGRSAALGFAQASGIPYREGLIKNR--YVG----------RTFI--MPTQE 319 (442)
T ss_pred HHHHHHHHHHHHhcC---CCCEEEEEccCCHHHHHHHHHHHhCCCchHHeEEec--ccc----------cccc--CCCHH
Confidence 455688898987654 48999999999999999999999999985 34432 111 0000 00000
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
.|.. .+ ..++.. .....+|+|||||||+++|| +++++|+++|++.+.+.+.
T Consensus 320 ~R~~-----~v----------~~k~~~-~~~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~ 374 (442)
T TIGR01134 320 LREL-----SV----------RLKLNP-IREVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIA 374 (442)
T ss_pred HHHH-----HH----------hhhccc-ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEc
Confidence 0100 00 001111 12234799999999999999 7779999999999997666
No 52
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.47 E-value=4.7e-06 Score=70.07 Aligned_cols=118 Identities=20% Similarity=0.255 Sum_probs=86.2
Q ss_pred eccCCCCCHHHHHHHHHHHHHHHhhcCC-CccEEEeecccCcchHHHHhhhcCCCe----EEEeeCCCCCCchhhhhhcc
Q psy6201 45 DIFSVYRDQAASTALHCLLKCYALSLKD-KIDVVYAIESRGFLFGPYIGQVLDIPF----VPIRKKGKLPGVVERLEYGL 119 (220)
Q Consensus 45 D~~~~l~~p~~~~~l~~~la~~~~~~~~-~~D~Ivgie~~Gi~la~~lA~~lg~p~----V~vRK~~k~~g~~~~~~~~~ 119 (220)
+...++.+.+...+-..++++.+.+... +.-+++|+=.|+++|.+-+..+++.|. +.+-..+....
T Consensus 6 ~~~evLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~--------- 76 (178)
T COG0634 6 HIKEVLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTS--------- 76 (178)
T ss_pred ccceEeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcc---------
Confidence 4566777888888888888887776422 455899999999999999999999873 33332221000
Q ss_pred ccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEec--CCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEE
Q psy6201 120 EYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQK--DGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVV 193 (220)
Q Consensus 120 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~--~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~ 193 (220)
++...++.+ +.-..|+.||||||++.|| ...+++...|++-+
T Consensus 77 --------------------------------ssg~v~i~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv 124 (178)
T COG0634 77 --------------------------------SSGEVKILKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSV 124 (178)
T ss_pred --------------------------------cCCceEEecccccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeE
Confidence 001122223 2335899999999999999 67788889999999
Q ss_pred EEEEEEEecC
Q psy6201 194 ECFAVMELKD 203 (220)
Q Consensus 194 ~v~vli~~~~ 203 (220)
-+++++++..
T Consensus 125 ~i~tLldK~~ 134 (178)
T COG0634 125 RIATLLDKPE 134 (178)
T ss_pred EEEEEeeCcc
Confidence 9999999985
No 53
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.46 E-value=6.1e-07 Score=85.20 Aligned_cols=108 Identities=21% Similarity=0.235 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
.....+++.|++... .++|+|+.++..|.++|..+|..+|+|+. ++|.+. .+ - .|
T Consensus 255 ~~R~~~G~~La~~~~---~~~D~Vv~VPdsg~~~A~~~a~~lgip~~~~l~k~r~--~~----------r------tf-- 311 (442)
T PRK08341 255 SARYRMGVELARESP---AEGDVVIAVPDSGRTAALGFAHESGIPYMEGLIKNRY--IG----------R------TF-- 311 (442)
T ss_pred HHHHHHHHHhhcccC---CCCceEEEecCchHHHHHHHHHHhCCCchheEEEecc--cc----------c------cc--
Confidence 566688998888765 47899999999999999999999999985 344331 11 0 00
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEE-ecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEV-QKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~-~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
+ +|. |+.. .. .+.+ ......+|++||||||+++|| +++++|+++||+-+.+.+
T Consensus 312 i-~~~--qr~~-----~~-----~~k~~~~~~~v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~ 369 (442)
T PRK08341 312 I-MPS--GREL-----KV-----KLKLSPVREVINGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRI 369 (442)
T ss_pred c-CcC--chhh-----hh-----eeeecccccccCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEE
Confidence 0 000 0000 00 1111 112234799999999999999 777999999999877554
No 54
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.44 E-value=1.8e-06 Score=78.24 Aligned_cols=83 Identities=22% Similarity=0.210 Sum_probs=61.9
Q ss_pred cEEEeecccCcchHHHHhhhcC-CCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeec
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLD-IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGT 153 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg-~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 153 (220)
-+|+++..||+.+|..+|..++ .|+.+++|.+.... ++ .. ++
T Consensus 150 ~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~------------------------~~----~~-------~~-- 192 (304)
T PRK03092 150 VTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTV------------------------PN----QV-------VA-- 192 (304)
T ss_pred cEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCC------------------------CC----ce-------EE--
Confidence 3899999999999999999999 99999988642110 00 00 00
Q ss_pred eEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 154 DCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 154 ~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
..+ .+. ..|++|+||||+++|| ++++.+++.|++-+-+++.
T Consensus 193 --~~~-~~d-v~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~~I~~~~t 237 (304)
T PRK03092 193 --NRV-VGD-VEGRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAAT 237 (304)
T ss_pred --Eec-CcC-CCCCEEEEEccccCcHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 111 122 3799999999999999 7778899999988777773
No 55
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=98.43 E-value=2e-06 Score=78.17 Aligned_cols=84 Identities=27% Similarity=0.333 Sum_probs=64.7
Q ss_pred cEEEeecccCcchHHHHhhhcCCCeEEEeeCCC-CCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeec
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK-LPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGT 153 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k-~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 153 (220)
-+|++++.||.-.|..+|..||.|+.++.|++- .+. ..
T Consensus 165 ~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~~------------------------------~v----------- 203 (314)
T COG0462 165 PVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSPN------------------------------VV----------- 203 (314)
T ss_pred cEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCCC------------------------------eE-----------
Confidence 699999999999999999999999999988752 222 10
Q ss_pred eEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 154 DCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 154 ~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
++....+. ..|+.|+||||+++|| .+.++|++.||+-+-+++....
T Consensus 204 -~~~~~~gd-V~gk~~iiVDDiIdTgGTi~~Aa~~Lk~~GAk~V~a~~tH~v 253 (314)
T COG0462 204 -EVMNLIGD-VEGKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGV 253 (314)
T ss_pred -EEeecccc-cCCCEEEEEeccccccHHHHHHHHHHHHCCCCeEEEEEEchh
Confidence 01001122 4799999999999999 7779999999998876665443
No 56
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=98.42 E-value=2.1e-06 Score=77.75 Aligned_cols=80 Identities=28% Similarity=0.351 Sum_probs=62.1
Q ss_pred EEEeecccCcchHHHHhhhc-CCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeece
Q psy6201 76 VVYAIESRGFLFGPYIGQVL-DIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTD 154 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~l-g~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 154 (220)
+|++++.+|.+++..+|..+ +.|+.+++|+++... .. .
T Consensus 154 vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~------------------------------~~-------~---- 192 (302)
T PLN02369 154 VVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHN------------------------------VA-------E---- 192 (302)
T ss_pred EEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcc------------------------------ee-------e----
Confidence 89999999999999999999 799999988753221 00 0
Q ss_pred EEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 155 CIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 155 ~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
...+ .+. ..|++|+||||+++|| ++++.+++.|++.+.+++.
T Consensus 193 ~~~~-~~~-v~g~~viivDDii~TG~Tl~~a~~~l~~~Ga~~v~~~~t 238 (302)
T PLN02369 193 VMNL-IGD-VKGKVAIMVDDMIDTAGTITKGAALLHQEGAREVYACAT 238 (302)
T ss_pred eEec-CCC-CCCCEEEEEcCcccchHHHHHHHHHHHhCCCCEEEEEEE
Confidence 0111 122 3699999999999999 7778899999998887773
No 57
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=98.42 E-value=4.3e-07 Score=87.06 Aligned_cols=112 Identities=19% Similarity=0.226 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
.....+++.|++.+.. ++|+|+.++-.|.++|..+|..+|+|+. .+|.+ ..+ -.++ -|...
T Consensus 269 ~~R~~lg~~La~~~~~---~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~--~~~----------rt~~--~~~q~ 331 (484)
T PRK07272 269 TARKRMGKRLAQEFPH---DADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQ--YVA----------RTFI--QPTQE 331 (484)
T ss_pred HHHHHHHHHHHhhcCC---CCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEc--cCC----------cccc--CCCHH
Confidence 4446788888876653 5899999999999999999999999973 34422 111 0000 00001
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
.|.. .+ ...+... ....+|++|+||||+++|| +++++|+++||+.+.+.+.
T Consensus 332 ~R~~-----~v----------r~~f~~~-~~~~~gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~ 386 (484)
T PRK07272 332 LREQ-----GV----------RMKLSAV-SGVVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIA 386 (484)
T ss_pred HHHH-----HH----------hhCcccc-ccccCCCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEe
Confidence 1100 00 0011111 2345799999999999999 7889999999999998888
No 58
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=98.41 E-value=1.1e-06 Score=84.03 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.|++... .+.|+|+.++..|.+.|..+|..+|+|+. ++|.+. .+- ++.+ |...
T Consensus 275 ~~R~~~G~~La~~~~---~~~D~VvpVP~s~~~~A~g~a~~~gip~~~~L~r~r~--~~r----~fi~--------~~q~ 337 (474)
T PRK06388 275 QARVRMGMRLAKESP---VEADVVVPVPDSGRSQAIGFSMASGIPYTEGLIKNRY--SER----TFIM--------PTQS 337 (474)
T ss_pred HHHHHHHHHHHhhcc---CCCcEEEeeCCCcHHHHHHHHHHhCCCchhheEEecc--cCC----cccC--------Cchh
Confidence 455588898888765 47899999999999999999999999984 344331 110 0000 0000
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEe-cCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQ-KDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~-~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
.| ...-.+.+. .....+|++||||||+++|| +++++|+++||+.+.+.+
T Consensus 338 ~R-----------------~~~~~~kl~~~~~~i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri 391 (474)
T PRK06388 338 DR-----------------KAAIKLKLNPIREVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRI 391 (474)
T ss_pred hh-----------------hhceeEEeccccccccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 00 000011111 12234799999999999999 777999999999887543
No 59
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.39 E-value=3.2e-06 Score=77.54 Aligned_cols=82 Identities=28% Similarity=0.348 Sum_probs=62.5
Q ss_pred ccEEEeecccCcchHHHHhhhcC-CCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeee
Q psy6201 74 IDVVYAIESRGFLFGPYIGQVLD-IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYG 152 (220)
Q Consensus 74 ~D~Ivgie~~Gi~la~~lA~~lg-~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 152 (220)
-.+|++++.+|...+..+|..++ +|+.+++|+++... .. .
T Consensus 180 ~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~------------------------------~~--~------- 220 (330)
T PRK02812 180 DIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHN------------------------------VA--E------- 220 (330)
T ss_pred CeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCc------------------------------ee--e-------
Confidence 34899999999999999999995 89999988653211 00 0
Q ss_pred ceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 153 TDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 153 ~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
.+.+. +. .+|++|+||||+++|| .+++.+++.|++-+.+++.
T Consensus 221 --~~~~~-~~-v~g~~viiVDDii~TG~T~~~a~~~L~~~Ga~~v~~~~t 266 (330)
T PRK02812 221 --VLNVI-GD-VKGKTAILVDDMIDTGGTICEGARLLRKEGAKQVYACAT 266 (330)
T ss_pred --eEecc-cc-CCCCEEEEEccccCcHHHHHHHHHHHhccCCCeEEEEEE
Confidence 01111 12 4799999999999999 7778999999988887774
No 60
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=98.38 E-value=4.7e-07 Score=86.63 Aligned_cols=111 Identities=23% Similarity=0.230 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
+....+++.||+... .++|+|+.++..|.++|..+|..+|+|+. ++|.+. .+ --+. .|...
T Consensus 267 ~~R~~~G~~La~~~~---~~~D~VvpVP~s~~~~A~gla~~~gip~~~~lik~~~--~~----------Rt~i--~~~~~ 329 (475)
T PRK07631 267 TARKNLGKRLALEAP---VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRY--VG----------RTFI--QPSQA 329 (475)
T ss_pred HHHHHHHHHHHhhCC---CCCcEEEEechhHHHHHHHHHHHHCCCcccceEEEec--CC----------CCCc--CCCHH
Confidence 456689999997654 47999999999999999999999999984 344321 11 0000 00001
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
.|.. .+ ...+... ....+|++||||||+++|| +++++|+++||+-+.+.+
T Consensus 330 ~R~~-----nv----------~~~f~~~-~~~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~ 383 (475)
T PRK07631 330 LREQ-----GV----------KMKLSPV-RGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRI 383 (475)
T ss_pred HHHH-----HH----------hhhhhhc-ccccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEE
Confidence 1100 00 0012111 2335799999999999999 777899999999877544
No 61
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=98.38 E-value=1.1e-06 Score=84.56 Aligned_cols=111 Identities=23% Similarity=0.231 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhhc--CCCccEEEeecccCcchHHHHhhhcCCCeE--EEeeCCCCCCchhhhhhccccceeccCCccccc
Q psy6201 58 ALHCLLKCYALSL--KDKIDVVYAIESRGFLFGPYIGQVLDIPFV--PIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIR 133 (220)
Q Consensus 58 ~l~~~la~~~~~~--~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V--~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~ 133 (220)
.+++.|++.+... ..+.|+|+.++..|.++|..+|..+|+|+. ++|++. .+- -++ .|....|
T Consensus 276 ~lg~~LA~~l~~~~~~~~~D~VvpVP~s~~~~A~~la~~lgip~~~~l~k~~~--~~r----------t~i--~~~q~~R 341 (501)
T PRK09246 276 RMGEKLAEKIKREWPDLDIDVVIPIPDTSRDAALEIARILGVPYREGFVKNRY--VGR----------TFI--MPGQAQR 341 (501)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHHHHHHHHCCCccceEEEEec--ccc----------ccc--CcCHHHH
Confidence 4555555544321 035799999999999999999999999974 233321 110 000 0000001
Q ss_pred cCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEE
Q psy6201 134 KKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAV 198 (220)
Q Consensus 134 ~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vl 198 (220)
.. .+ ...+... ....+|++||||||+++|| +++++|+++||+-+.+.++
T Consensus 342 ~~-----~v----------r~~f~~~-~~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ 394 (501)
T PRK09246 342 KK-----SV----------RQKLNAI-RAEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASA 394 (501)
T ss_pred HH-----HH----------HhhcCCc-cccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEE
Confidence 00 00 0011111 1235799999999999999 7779999999999887776
No 62
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=98.36 E-value=3.8e-06 Score=70.74 Aligned_cols=124 Identities=22% Similarity=0.278 Sum_probs=73.0
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhcCC-CccEEEeecc-------cCcchHHHHhh----hcCC-CeEEEeeCCCCCC
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALSLKD-KIDVVYAIES-------RGFLFGPYIGQ----VLDI-PFVPIRKKGKLPG 110 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~~~~-~~D~Ivgie~-------~Gi~la~~lA~----~lg~-p~V~vRK~~k~~g 110 (220)
+--...-.+..+...++..+++.+..... .+|.|+-++. +|+-.+..+|. .++. .-+..|.+. ..
T Consensus 49 i~~~K~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGfnq~~~la~~l~~~~~~~~~~l~r~~~--~~ 126 (190)
T TIGR00201 49 ISRFKFRGQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGFNQADLLAQCLSRWLFNYHNIVIRLNN--ET 126 (190)
T ss_pred HHHhccCCChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCCCHHHHHHHHHHHHhCCCcceEEEecc--cc
Confidence 33445567888888899988877654211 3688888874 88855555544 4443 223334332 11
Q ss_pred chhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHH
Q psy6201 111 VVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
+ ..+.. .-|.. .+ .+.+.+... ...|++|||||||+||| ++.+.+.
T Consensus 127 -Q----~~l~~---------~~R~~-----n~----------~~~f~~~~~-~~~~~~vllvDDV~TTGaTl~~~~~~L~ 176 (190)
T TIGR00201 127 -Q----SKLKA---------TLRFL-----NL----------ENAFDLKNN-SFQGRNIVLVDDVVTTGATLHEIARLLL 176 (190)
T ss_pred -c----ccCCH---------HHHHH-----HH----------hCcEEccCC-CCCCCEEEEEeeeeccHHHHHHHHHHHH
Confidence 0 00000 00000 00 012222222 24689999999999999 6778888
Q ss_pred hcCCeEEEEEEEE
Q psy6201 187 TLGVDVVECFAVM 199 (220)
Q Consensus 187 ~~Ga~v~~v~vli 199 (220)
++|+..+.++++.
T Consensus 177 ~~Ga~~V~~~~la 189 (190)
T TIGR00201 177 ELGAASVQVWTLA 189 (190)
T ss_pred HcCCCEEEEEEEE
Confidence 9999999988774
No 63
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=98.31 E-value=2.5e-06 Score=82.33 Aligned_cols=110 Identities=25% Similarity=0.240 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEE-eeCCCCCCchhhhhhccccceeccCCcccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPI-RKKGKLPGVVERLEYGLEYGTVLDIPFVPI 132 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~v-RK~~k~~g~~~~~~~~~~~~~v~~~~~~~~ 132 (220)
+....+++.|++... .++|+|+.++.+|+..|..+|..+|+|+... .|. +..+ -.++ .|....
T Consensus 286 ~~R~~~G~~La~~~~---~~~D~VvpVP~sG~~~A~g~a~~~gip~~~~l~kn-~~~g----------rtfi--~~~q~~ 349 (510)
T PRK07847 286 AARVEIGRRLAREHP---VEADLVIPVPESGTPAAVGYAQESGIPFGQGLVKN-AYVG----------RTFI--QPSQTI 349 (510)
T ss_pred HHHHHHHHHHHhhCC---CCCeEEEeccCchHHHHHHHHHHhCCChhhceEee-cccc----------cCcc--Ccchhh
Confidence 566689999998654 5799999999999999999999999998442 222 1111 0000 011111
Q ss_pred ccCCCCCceeeeeeeeeeeeceEEEEe-cCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEE
Q psy6201 133 RKKGKLPGVVERLEYGLEYGTDCIEVQ-KDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECF 196 (220)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~y~~~~le~~-~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~ 196 (220)
|.. .. .+.+. ......|++||||||+++|| +++++++++|++-+.+.
T Consensus 350 r~~------------~~-----r~k~~~~~~~~~gk~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~r 401 (510)
T PRK07847 350 RQL------------GI-----RLKLNPLREVIRGKRLVVVDDSIVRGNTQRALVRMLREAGAAEVHVR 401 (510)
T ss_pred hhh------------ce-----eeecCccccccCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEE
Confidence 100 00 11110 12235899999999999999 77899999999977643
No 64
>PRK11595 DNA utilization protein GntX; Provisional
Probab=98.16 E-value=1.5e-05 Score=69.00 Aligned_cols=131 Identities=21% Similarity=0.237 Sum_probs=77.7
Q ss_pred CCcccCceeccCCCCCHHHHHHHHHHHHHHHhh-----cCCCccEEEeeccc-------CcchHHHH----hhhcCCCeE
Q psy6201 37 PGFLSPPRDIFSVYRDQAASTALHCLLKCYALS-----LKDKIDVVYAIESR-------GFLFGPYI----GQVLDIPFV 100 (220)
Q Consensus 37 ~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~-----~~~~~D~Ivgie~~-------Gi~la~~l----A~~lg~p~V 100 (220)
.|....++.-...-.+..+...+++.|++.+.. ....+|.|+.++.. |+-.+..+ |..+++|+.
T Consensus 71 ~g~~r~lI~~~Ky~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGfnq~~~la~~la~~~~~~~~ 150 (227)
T PRK11595 71 APPLSGLIHQLKFSRRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGFNQSDLLCRPLARWLGCDYD 150 (227)
T ss_pred ccHHHHHHHHHHHCccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCc
Confidence 444433455556677888888899988766431 12367999998865 76665544 556788762
Q ss_pred ---EEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccC
Q psy6201 101 ---PIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIA 177 (220)
Q Consensus 101 ---~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~ 177 (220)
..|.+. ...+ ..++ ..-|.. .. ...+.+. .-..|++|||||||++
T Consensus 151 ~~~l~r~~~--~~~q----~~l~---------~~~R~~--------------n~-~~~f~~~--~~~~~~~vllvDDv~t 198 (227)
T PRK11595 151 SEALTRTRA--TATQ----HFLS---------ARLRKR--------------NL-KNAFRLE--LPVQGQHMAIVDDVVT 198 (227)
T ss_pred ccceEEecC--CCCc----ccCC---------HHHHhh--------------hh-hhhhccC--CCCCCCEEEEEeeeec
Confidence 333221 1100 0000 000000 00 0011121 1247999999999999
Q ss_pred CC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 178 TG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 178 TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
|| ++.+.++++|+..+.++++.
T Consensus 199 TG~Tl~~~~~~L~~~g~~~V~~~~la 224 (227)
T PRK11595 199 TGSTVAEIAQLLLRNGAASVQVWCLC 224 (227)
T ss_pred chHHHHHHHHHHHHcCCcEEEEEEEE
Confidence 99 66788899999999988875
No 65
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=98.14 E-value=2e-05 Score=72.23 Aligned_cols=97 Identities=24% Similarity=0.212 Sum_probs=67.4
Q ss_pred HHHHHHHHHhhcC-CCccEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCC
Q psy6201 59 LHCLLKCYALSLK-DKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGK 137 (220)
Q Consensus 59 l~~~la~~~~~~~-~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~ 137 (220)
....+++++.... .+-.+|++++.||.-.+..++ +++|+++.+|.+. +
T Consensus 168 a~~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a--~~~~~~~~~K~R~--g--------------------------- 216 (326)
T PLN02297 168 GIPLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQF--EHFPMVVCTKVRE--G--------------------------- 216 (326)
T ss_pred cHHHHHHHHHhccccCCcEEEecCccHHHHHHHHc--CCCCEEEEEeEEC--C---------------------------
Confidence 4456666664420 123489999999988876665 6899999988642 2
Q ss_pred CCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 138 LPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 138 ~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
.. ..........+|++|+||||+++|| .+.+.+++.|++.+.+++....
T Consensus 217 ---~~------------~~~~~~~~dv~gr~vlIVDDIidTG~Tl~~aa~~L~~~Ga~~V~~~~THgl 269 (326)
T PLN02297 217 ---DK------------RIVRIKEGNPAGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGV 269 (326)
T ss_pred ---Cc------------eEEEecccccCCCeEEEEecccCcHHHHHHHHHHHHHCCCcEEEEEEECcc
Confidence 00 0111112234899999999999999 7778899999999887776543
No 66
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=98.06 E-value=2.7e-05 Score=73.88 Aligned_cols=96 Identities=19% Similarity=0.186 Sum_probs=67.7
Q ss_pred HHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcC------CCeEEEeeCCCCCCchhhhhhccccceeccCCcccccc
Q psy6201 61 CLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLD------IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRK 134 (220)
Q Consensus 61 ~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg------~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~ 134 (220)
..+++.+......--+|+++..||...+..+|..|+ +++.++.|.+...+
T Consensus 267 ~~~a~~i~~~~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~------------------------ 322 (439)
T PTZ00145 267 LIGLDYFTKKDLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPN------------------------ 322 (439)
T ss_pred HHHHHHHhhcCCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCC------------------------
Confidence 334444543112334899999999999999999997 78888887653222
Q ss_pred CCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 135 KGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 135 ~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
... .+++ .+. ..|+.|+||||+++|| ++.+.+++.||.-+.+++..
T Consensus 323 ------~v~-----------~~~l-vgd-V~Gk~vIIVDDIIdTG~Tl~~aa~~Lk~~GA~~V~~~~TH 372 (439)
T PTZ00145 323 ------EIE-----------KMDL-VGN-VYDSDVIIVDDMIDTSGTLCEAAKQLKKHGARRVFAFATH 372 (439)
T ss_pred ------ceE-----------EEec-cCC-CCCCEEEEEcceeCcHHHHHHHHHHHHHcCCCEEEEEEEc
Confidence 110 1111 122 3799999999999999 77789999999988877743
No 67
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=98.05 E-value=1e-05 Score=70.46 Aligned_cols=132 Identities=23% Similarity=0.261 Sum_probs=84.1
Q ss_pred CCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecc-------cCcchHHHHhhhc----CCCeEEEee
Q psy6201 36 TPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIES-------RGFLFGPYIGQVL----DIPFVPIRK 104 (220)
Q Consensus 36 ~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~-------~Gi~la~~lA~~l----g~p~V~vRK 104 (220)
-.|..+.++-......+..+-+.+++.|+..+......+|.|+-++. +|+=.+..+|..+ |+|+...|.
T Consensus 74 Y~~~l~~~i~~~Kf~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGFNQ~~~la~~l~~~~~~~~~~~r~ 153 (225)
T COG1040 74 YNGPLRELISQLKFQGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGFNQSELLARALARRLGKPIALRRV 153 (225)
T ss_pred ccHHHHHHHHHhhhCCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCCCHHHHHHHHHHHHhCchHHHHHH
Confidence 34555455666677888899999999999999843468999998875 5887777777665 555533332
Q ss_pred CCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeee--ceEEEEecCCCCCCCEEEEEecccCCC---
Q psy6201 105 KGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYG--TDCIEVQKDGGKAGKKALIVDDLIATG--- 179 (220)
Q Consensus 105 ~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~le~~~~~l~~G~rVLIVDDvi~TG--- 179 (220)
+...+- ..+ +...+-. ...+.+. ......++|+|||||+|||
T Consensus 154 k~~~~q------~~l--------------------------~~~~rr~nl~~aF~~~-~~~~~~~~vlLvDDV~TTGaTl 200 (225)
T COG1040 154 KDTSPQ------QGL--------------------------KALERRRNLKGAFRLK-KGIEEPKNVLLVDDVYTTGATL 200 (225)
T ss_pred hccccc------ccc--------------------------chHHHHHhccCCeecC-CCCCCCCeEEEEecccccHHHH
Confidence 211100 000 0000000 0112222 2222338999999999999
Q ss_pred -hHHHHHHhcCCeEEEEEEEEE
Q psy6201 180 -ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 180 -a~i~ll~~~Ga~v~~v~vli~ 200 (220)
++.+++++.|++.+.+.++..
T Consensus 201 ~~~~~~L~~~Ga~~v~~~~lar 222 (225)
T COG1040 201 KEAAKLLREAGAKRVFVLTLAR 222 (225)
T ss_pred HHHHHHHHHcCCceEEEEEEEe
Confidence 666889999999999888764
No 68
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.91 E-value=0.00026 Score=59.23 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=33.8
Q ss_pred CCCCEEEEEecccCCC----hHHHHHHhcC-CeEEEEEEEEEec
Q psy6201 164 KAGKKALIVDDLIATG----ASCQLLTTLG-VDVVECFAVMELK 202 (220)
Q Consensus 164 ~~G~rVLIVDDvi~TG----a~i~ll~~~G-a~v~~v~vli~~~ 202 (220)
..|++|++||||+.|| |+++.+-..| ...+..+|+++++
T Consensus 94 i~~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavLVDRG 137 (179)
T COG2065 94 ITGKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVLVDRG 137 (179)
T ss_pred ccCCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEEEcCC
Confidence 4799999999999999 8888888887 6677789999986
No 69
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=97.85 E-value=4.9e-05 Score=72.13 Aligned_cols=118 Identities=25% Similarity=0.282 Sum_probs=79.5
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCe--EEEeeCCCCCCchhhhhhcccc
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPF--VPIRKKGKLPGVVERLEYGLEY 121 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~--V~vRK~~k~~g~~~~~~~~~~~ 121 (220)
+|-.++. .....+++.|++...- +.|+|++++-.|++.|...|.++|+|+ -++|.+ +.| -
T Consensus 260 Idg~sVy---~~R~~mG~~La~e~~~---eaDvVipVPDSg~~aAig~A~~sGiPy~~GliKNr--Yvg----------R 321 (470)
T COG0034 260 IDGISVY---EARKRMGEKLAEEIPV---EADVVIPVPDSGRPAAIGYARASGIPYEEGLIKNR--YVG----------R 321 (470)
T ss_pred cCCeeHH---HHHHHHHHHHHHhCCc---cccEEEecCCCChHHHHHHHHHhCCchhhcccccc--ccc----------e
Confidence 4444442 4566889999988774 789999999999999999999999997 344432 222 0
Q ss_pred ceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEE
Q psy6201 122 GTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFA 197 (220)
Q Consensus 122 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~v 197 (220)
-|++ |+..+|..+ + . -++.. .....+|+||++|||=+-.| ..+++++++||+-+.+..
T Consensus 322 TFI~--P~q~~R~~~-----V-------r---~KLnp-vr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvri 383 (470)
T COG0034 322 TFIM--PTQELREKG-----V-------R---LKLNP-VREVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRI 383 (470)
T ss_pred eeeC--CcHHHHHhh-----h-------h---hhcCc-hHHHhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEe
Confidence 0111 222222221 0 0 01111 12335899999999999999 788999999999888544
No 70
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=97.72 E-value=0.0002 Score=61.47 Aligned_cols=94 Identities=17% Similarity=0.266 Sum_probs=63.1
Q ss_pred EEEeecccCcchHHHHhhhcC-CCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeece
Q psy6201 76 VVYAIESRGFLFGPYIGQVLD-IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTD 154 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg-~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 154 (220)
+++++..+|++++..++..++ .++-++.+.+. .. .. . ...|
T Consensus 73 vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~-~~------------------------------t~--~--~~~~--- 114 (209)
T PRK00129 73 VIVPILRAGLGMVDGVLKLIPSARVGHIGLYRD-EE------------------------------TL--E--PVEY--- 114 (209)
T ss_pred EEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeC-CC------------------------------CC--C--CEEE---
Confidence 789999999999999999987 45544433221 11 00 0 0001
Q ss_pred EEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEecCcCCceeec
Q psy6201 155 CIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 155 ~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~~~~g~~~l~ 211 (220)
...++ .-..|++|+||||+++|| .+++.+++.|++-+-+++++... .|.+++.
T Consensus 115 ~~~lp--~~i~~~~VllvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~ll~~~--~gl~~l~ 171 (209)
T PRK00129 115 YVKLP--EDIDERTVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVLCLVAAP--EGIKALE 171 (209)
T ss_pred EeeCC--CcCCCCEEEEECCcccchHHHHHHHHHHHHcCCCEEEEEEEecCH--HHHHHHH
Confidence 01111 123689999999999999 77788889998888777777765 4666664
No 71
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=97.53 E-value=0.00049 Score=58.99 Aligned_cols=95 Identities=15% Similarity=0.216 Sum_probs=62.4
Q ss_pred cEEEeecccCcchHHHHhhhcC-CCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeec
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLD-IPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGT 153 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg-~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 153 (220)
=+++++-.+|++++..+...+. .++..+.+.+ ... .. ....|
T Consensus 70 i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r-~~~------------------------------t~----~~~~~-- 112 (207)
T TIGR01091 70 IVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYR-NEE------------------------------TL----KPVPY-- 112 (207)
T ss_pred EEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEe-CCC------------------------------CC----CCEEE--
Confidence 4678888999999999998886 3554443321 101 00 00011
Q ss_pred eEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEecCcCCceeec
Q psy6201 154 DCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 154 ~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~~~~g~~~l~ 211 (220)
...++ .-..|++||||||+++|| .+++.+++.|++-+-+++++... .|.+++.
T Consensus 113 -~~~lp--~~i~~~~VllvDd~laTG~Tl~~ai~~L~~~G~~~I~v~~ll~~~--~gl~~l~ 169 (207)
T TIGR01091 113 -YSKLP--EDIDERTVIVLDPMLATGGTMIAALDLLKKRGAKKIKVLSIVAAP--EGIEAVE 169 (207)
T ss_pred -EecCC--CCCCCCEEEEECCCccchHHHHHHHHHHHHcCCCEEEEEEEecCH--HHHHHHH
Confidence 01111 123788999999999999 77888999998877777777665 4666664
No 72
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=97.52 E-value=0.0003 Score=59.73 Aligned_cols=111 Identities=23% Similarity=0.256 Sum_probs=57.2
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeec--
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGT-- 153 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-- 153 (220)
+|++...+|---|+++|.+|++.|.++.+..+.... .+.+ +- .+-|...-.. .-...........
T Consensus 6 VIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~-----~~~~-~~-~s~p~~~~~~------~~~~~~~~~~~~~e~ 72 (184)
T PF14572_consen 6 VIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSES-----DGVD-GR-HSPPMSRSAA------VSSSEEIPEMTPKEK 72 (184)
T ss_dssp EEEESSGGGHHHHHHHHHHCT-EEEEE-----------------------------------------------------
T ss_pred EEEeCCCCchHhHHHHHHHhCCCeeEecCccccccc-----cccc-cc-cCCCcccccc------ccccchhhhcccCcc
Confidence 789999999999999999999999998876543210 0000 00 0011110000 0000000000000
Q ss_pred eEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe
Q psy6201 154 DCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL 201 (220)
Q Consensus 154 ~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~ 201 (220)
..+.+- +. ..|+.++||||++.|| .+.+++++.||.-+-+++-...
T Consensus 73 ~~~~vV-GD-V~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgv 122 (184)
T PF14572_consen 73 PPMNVV-GD-VKGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGV 122 (184)
T ss_dssp --EEEE-S---TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE-
T ss_pred cceEEE-EE-ccCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcc
Confidence 012221 22 3799999999999999 7889999999997776655444
No 73
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=97.34 E-value=0.004 Score=53.18 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=79.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEee-CCCCCCchhhhhhccccceec
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRK-KGKLPGVVERLEYGLEYGTVL 125 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK-~~k~~g~~~~~~~~~~~~~v~ 125 (220)
..+.-+|.....+...|+..+.+...+.-.++|-+--+-.+|..++..++-...|.-. +...++
T Consensus 27 KHiPv~P~~~~~~~~~La~~~~~~~~~~~lvIGfAETATgLG~~V~~~~~~~~~ylhTTR~~v~~--------------- 91 (191)
T PF15609_consen 27 KHIPVRPSVMRDAGRLLAAQVPEALPGPVLVIGFAETATGLGHGVFDALGAACLYLHTTREPVPG--------------- 91 (191)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHHHHHHhhhccceeeeccccCCC---------------
Confidence 4567799999999999999999744477889999989999999999998843333322 122333
Q ss_pred cCCccccccCCCCCceeeeeeeeeeee--ceEEEEec--CCCCCCCEEEEEecccCCC-hHHHHH---Hhc-CCeEEEEE
Q psy6201 126 DIPFVPIRKKGKLPGVVERLEYGLEYG--TDCIEVQK--DGGKAGKKALIVDDLIATG-ASCQLL---TTL-GVDVVECF 196 (220)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~le~~~--~~l~~G~rVLIVDDvi~TG-a~i~ll---~~~-Ga~v~~v~ 196 (220)
......+.++.. ++++-+.. +.+...+.+++|||=++|| ..+.++ ++. --+=.-++
T Consensus 92 ---------------~~~~~~F~E~HSHAt~h~ly~~~~~~l~~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvva 156 (191)
T PF15609_consen 92 ---------------VPPLLEFEEEHSHATDHLLYPPDPDLLRNARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVA 156 (191)
T ss_pred ---------------CccceeeeccccccccceecCCChHHhcCCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEE
Confidence 111122333332 22332322 3455677999999999999 444444 333 33333355
Q ss_pred EEEEec
Q psy6201 197 AVMELK 202 (220)
Q Consensus 197 vli~~~ 202 (220)
.++|-.
T Consensus 157 sL~d~~ 162 (191)
T PF15609_consen 157 SLLDWR 162 (191)
T ss_pred EEeeCC
Confidence 566654
No 74
>KOG3367|consensus
Probab=96.94 E-value=0.0066 Score=51.41 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=76.1
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhh-cCCCccEEEeecccCcchHHHHhhhc-C------CCe--EEEeeCCCCCCchh
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALS-LKDKIDVVYAIESRGFLFGPYIGQVL-D------IPF--VPIRKKGKLPGVVE 113 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~-~~~~~D~Ivgie~~Gi~la~~lA~~l-g------~p~--V~vRK~~k~~g~~~ 113 (220)
-|+..++..--+.++=.+.+|.-+.+ .|..+=+++++..||.-+-+.+-.++ + +|+ =++|-+.-...
T Consensus 30 ~Dls~v~ip~gli~dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kSY~n~--- 106 (216)
T KOG3367|consen 30 GDLSGVVIPHGLIRDRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKSYCND--- 106 (216)
T ss_pred ccccccccccchhhhHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhhhcCC---
Confidence 55665555555555555555554443 34566688999999988888777663 2 333 23443210000
Q ss_pred hhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEE-EecCCC--CCCCEEEEEecccCCC----hHHHHHH
Q psy6201 114 RLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIE-VQKDGG--KAGKKALIVDDLIATG----ASCQLLT 186 (220)
Q Consensus 114 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le-~~~~~l--~~G~rVLIVDDvi~TG----a~i~ll~ 186 (220)
. . +..+. ++.+.+ ..|++||||||++.|| ..++.++
T Consensus 107 -------------------------------~----s--tg~iqiig~d~l~~ltgK~VliVeDIvdTGrTl~~Lls~~~ 149 (216)
T KOG3367|consen 107 -------------------------------Q----S--TGDIQIIGGDDLSTLTGKNVLIVEDIVDTGRTLSTLLSHMK 149 (216)
T ss_pred -------------------------------c----c--cCCceeecCCCHHHhcCCcEEEEEeeccccchHHHHHHHHH
Confidence 0 0 00121 222333 5899999999999999 6678888
Q ss_pred hcCCeEEEEEEEEEecC
Q psy6201 187 TLGVDVVECFAVMELKD 203 (220)
Q Consensus 187 ~~Ga~v~~v~vli~~~~ 203 (220)
+.+.+.+-++.+..+..
T Consensus 150 ~~k~~~v~vasLL~Krt 166 (216)
T KOG3367|consen 150 AYKPSMVKVASLLVKRT 166 (216)
T ss_pred hcCccceeeeeeccccc
Confidence 99999999999988764
No 75
>KOG0572|consensus
Probab=96.72 E-value=0.0029 Score=59.28 Aligned_cols=110 Identities=22% Similarity=0.235 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCe--EEEeeCCCCCCchhhhhhccccceeccCCccc
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPF--VPIRKKGKLPGVVERLEYGLEYGTVLDIPFVP 131 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~--V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~ 131 (220)
.....+++.||. ... .++|+|..++-+|-.-|...|...|+|| +++|.+ +-| --|+ .|...
T Consensus 275 ~~R~~~G~~LA~-e~P--~d~DvVi~VPdS~~~aAlgyA~~sG~py~e~l~rnr--YvG----------RTFI--~P~q~ 337 (474)
T KOG0572|consen 275 TVRLQCGEQLAT-EAP--VDADVVIPVPDSGTTAALGYAAKSGLPYQEVLIRNR--YVG----------RTFI--EPNQR 337 (474)
T ss_pred HHHHHHHhHhhh-cCC--cccceEEecCCchhHHHHHHHHHhCCchhhhhhhcc--ccc----------ceec--CccHH
Confidence 344567777776 344 6899999999999999999999999998 455543 211 0111 12222
Q ss_pred cccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEE
Q psy6201 132 IRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECF 196 (220)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~ 196 (220)
+|+.+ ... ++..- ..-..|+|||||||-+-.| ..+++++++||+-+...
T Consensus 338 iR~~~----------V~~-----Kl~~l-~~~~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~r 390 (474)
T KOG0572|consen 338 IRQLG----------VKK-----KLGPL-RQNFEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIR 390 (474)
T ss_pred HHHhh----------hhh-----hcccc-hhhcCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEE
Confidence 22111 000 11111 1224799999999999999 77899999999988743
No 76
>KOG1377|consensus
Probab=96.50 E-value=0.0054 Score=54.38 Aligned_cols=126 Identities=16% Similarity=0.056 Sum_probs=86.4
Q ss_pred CcccCCCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccE--EEeecccCcchHHH-HhhhcCCCeEEEe----
Q psy6201 32 ATYSTPGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDV--VYAIESRGFLFGPY-IGQVLDIPFVPIR---- 103 (220)
Q Consensus 32 ~~~~~~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~--Ivgie~~Gi~la~~-lA~~lg~p~V~vR---- 103 (220)
|++-.+|.+||+ .|..... .++.+..++..++..+-++...+|+ ++++.+.|++++.+ .|...+++.+.-+
T Consensus 53 pf~l~sk~h~di~~df~~~~-~~k~L~aLA~a~~f~I~edrkffDigntvg~qY~gg~~kia~wadl~n~h~v~g~~i~~ 131 (261)
T KOG1377|consen 53 PFILKSKTHSDIFFDFSLFN-SGKDLRALAQAYAFLIFEDRKFFDIGNTVGLQYKGGPLKIASWADLVNAHGVPGRGIIK 131 (261)
T ss_pred CeEeeccccCceeecccccc-cHHHHHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHhccCcccchHHH
Confidence 344589999999 6666554 8999999999999988877678999 99999999666554 4666666655444
Q ss_pred ----eCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC
Q psy6201 104 ----KKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG 179 (220)
Q Consensus 104 ----K~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG 179 (220)
|..|+|+ +.| .+- .+-..++++|+.||+.++|
T Consensus 132 g~~rk~~k~~~---------egG--------------------------------~ll---lAems~kg~L~~~dy~ea~ 167 (261)
T KOG1377|consen 132 GLNRKLLKDHG---------EGG--------------------------------VLL---LAELSSKGSLITGDYTEAA 167 (261)
T ss_pred HHhhhccccCC---------CCc--------------------------------eEE---EEEeccCCceeehhHHHHH
Confidence 3223322 001 010 0113678999999988877
Q ss_pred -hHH-HHHHhcCCeEEEEEEEEEec
Q psy6201 180 -ASC-QLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 180 -a~i-~ll~~~Ga~v~~v~vli~~~ 202 (220)
+.. +-++-.-+.|++..+..++.
T Consensus 168 ~aI~ee~~d~~~G~v~g~~~~ldrq 192 (261)
T KOG1377|consen 168 TAIAEEDIDFVNGFVAGSIVALDRQ 192 (261)
T ss_pred HHHHHhhhchheeEEeeeeeeccHH
Confidence 222 23455678888888887776
No 77
>PLN02541 uracil phosphoribosyltransferase
Probab=95.76 E-value=0.011 Score=52.27 Aligned_cols=50 Identities=26% Similarity=0.333 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEecCcCCceeec
Q psy6201 162 GGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 162 ~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~~~~~g~~~l~ 211 (220)
.+..+++|+|+||.++|| ++++++++.|+....+.++.=.....|-+++.
T Consensus 153 ~i~~~~~VlllDpmLATGgS~~~ai~~L~~~Gv~~~~I~~v~~ias~~Gl~~i~ 206 (244)
T PLN02541 153 KFPEGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVCAVAAPPALKKLS 206 (244)
T ss_pred hcCCCCEEEEECcchhhhHHHHHHHHHHHHcCCCcccEEEEEEEECHHHHHHHH
Confidence 345678999999999999 88899999999755533333333334666653
No 78
>KOG1448|consensus
Probab=95.49 E-value=0.056 Score=49.23 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=72.4
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEee-CCCCCCchhhhhhcccccee
Q psy6201 46 IFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRK-KGKLPGVVERLEYGLEYGTV 124 (220)
Q Consensus 46 ~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK-~~k~~g~~~~~~~~~~~~~v 124 (220)
+-+++..|..++.+.. ...+ .+--+|+.+..||---++++|..|++-|..+-| ++|..+
T Consensus 142 Vdnly~~p~~l~~ir~----~~~~--~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~~~-------------- 201 (316)
T KOG1448|consen 142 VDNLYAEPAVLNYIRE----NIPD--SENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKANE-------------- 201 (316)
T ss_pred chhhccchHHHHHHHh----hCCC--ccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcccc--------------
Confidence 6677878877665544 2333 455589999999999999999999988766544 333322
Q ss_pred ccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEE
Q psy6201 125 LDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVME 200 (220)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~ 200 (220)
+. ..+-+ .+. .+|+.++||||.+.|+ .+.+.|.+.||+-+-+++-..
T Consensus 202 -----------------v~----------~~m~L-VGD-v~gkvailVDDm~dt~GTl~~aa~~L~~~GA~kV~a~~THg 252 (316)
T KOG1448|consen 202 -----------------VD----------IRMVL-VGD-VKGKVAILVDDMADTCGTLIKAADKLLEHGAKKVYAIVTHG 252 (316)
T ss_pred -----------------cc----------eEEEE-Eec-cCCcEEEEecccccccchHHHHHHHHHhcCCceEEEEEcce
Confidence 00 00111 122 3799999999999999 555777779998877666443
No 79
>KOG1712|consensus
Probab=90.24 E-value=0.041 Score=46.17 Aligned_cols=140 Identities=20% Similarity=0.182 Sum_probs=96.3
Q ss_pred CCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhh--hcCCCeEE-EeeCCCCCCchh
Q psy6201 37 PGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQ--VLDIPFVP-IRKKGKLPGVVE 113 (220)
Q Consensus 37 ~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~--~lg~p~V~-vRK~~k~~g~~~ 113 (220)
+.+.+.++...++.....+|+++...+.+.-... .-+|.++. -+=. ..++.+|. +..++++.| +
T Consensus 9 ~~ik~~ir~~pdFPk~GI~F~Di~pll~dP~af~-~lidlf~~----------h~~~~~~~~Id~iaGlEaRGFLFG--P 75 (183)
T KOG1712|consen 9 KYIKTAIRVVPDFPKKGIMFQDITPLLLDPKAFK-KLIDLFVD----------HYRETFEMKIDVIAGLEARGFLFG--P 75 (183)
T ss_pred HHHHHhheeCCCCCCCceehhhhhhhhcCHHHHH-HHHHHHHH----------HHHHHhcCcceEEEeeeecceecC--c
Confidence 3455567788899999999999999888664431 12332211 1111 13455544 778888887 5
Q ss_pred hhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC---hHHHHHHhcCC
Q psy6201 114 RLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG---ASCQLLTTLGV 190 (220)
Q Consensus 114 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG---a~i~ll~~~Ga 190 (220)
-+..+++. +||++|||| ++++...+.+| ++|+++|.++..+ +.+..| -.++-+-+.|+
T Consensus 76 ~iAlalG~------~fVPiRK~g----KLPG~~i~~~Y---~lEYg~d~~Emq~------~Ai~~g~rvvvVDDllATGG 136 (183)
T KOG1712|consen 76 SIALALGA------GFVPIRKPG----KLPGEVISESY---ELEYGEDRFEMQK------GAIKPGQRVVVVDDLLATGG 136 (183)
T ss_pred HHHHHhCC------CeeecccCC----CCCCceeEEEE---eeecCccceeeec------cccCCCCeEEEEechhhcCc
Confidence 56666665 566999999 99999999999 7999998886554 668888 33455557899
Q ss_pred eEEEEEEEEEecCcCCceeec
Q psy6201 191 DVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 191 ~v~~v~vli~~~~~~g~~~l~ 211 (220)
+..++.-++++. |.+.++
T Consensus 137 Tl~AA~~Ll~r~---ga~vvE 154 (183)
T KOG1712|consen 137 TLAAATELLERV---GAEVVE 154 (183)
T ss_pred cHHHHHHHHHHh---ccEEEE
Confidence 888877777765 555554
No 80
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=85.37 E-value=10 Score=32.38 Aligned_cols=44 Identities=23% Similarity=0.506 Sum_probs=32.2
Q ss_pred CCCEEEEEecccCCC----hHHHHHHhcCC---eEEEEEEEEEecCcCCceeec
Q psy6201 165 AGKKALIVDDLIATG----ASCQLLTTLGV---DVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 165 ~G~rVLIVDDvi~TG----a~i~ll~~~Ga---~v~~v~vli~~~~~~g~~~l~ 211 (220)
.+++|+|+|-.++|| ++++.+.+.|. ++.-+.++.... |-+++.
T Consensus 120 ~~~~VillDpmlaTG~s~~~ai~~L~~~G~~~~~I~~v~~ias~~---Gl~~l~ 170 (207)
T PF14681_consen 120 ENRKVILLDPMLATGGSAIAAIEILKEHGVPEENIIIVSVIASPE---GLERLL 170 (207)
T ss_dssp TTSEEEEEESEESSSHHHHHHHHHHHHTTG-GGEEEEEEEEEEHH---HHHHHH
T ss_pred cCCEEEEEeccccchhhHHHHHHHHHHcCCCcceEEEEEEEecHH---HHHHHH
Confidence 789999999999999 77788889886 454444554432 555553
No 81
>PF15610 PRTase_3: PRTase ComF-like
Probab=67.49 E-value=90 Score=28.32 Aligned_cols=125 Identities=17% Similarity=0.152 Sum_probs=68.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhc----CCCccEEEeecc--cCcchHHHHhh------------hcCCCeEEEeeCCCC
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSL----KDKIDVVYAIES--RGFLFGPYIGQ------------VLDIPFVPIRKKGKL 108 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~----~~~~D~Ivgie~--~Gi~la~~lA~------------~lg~p~V~vRK~~k~ 108 (220)
+-.++|....+..++.|++.+-.. ...=|.|+.+.+ .-||-|+-.=. ..|.|-+.--|-
T Consensus 26 rfKfGd~~~A~~fg~~La~~fi~~~~~~~~~~d~iV~~~Sp~~~IPTAsn~L~~~Fv~~LNr~L~~~~~~~~~~~ki--- 102 (274)
T PF15610_consen 26 RFKFGDDRVAEQFGRELADGFIAQFSNALLTHDQIVMMPSPYRSIPTASNVLCDHFVKELNRHLAHNGAPPVIEVKI--- 102 (274)
T ss_pred eeecCCHHHHHHHHHHHHHHHHHhhHhhhccCceEEEecCccccCccHHHHHHHHHHHHHHHHHHHcCCCcceEeee---
Confidence 335789999998888888776542 224455666655 78887764321 134443332222
Q ss_pred CCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecCCCCCCCEEEEEecccCCC----hHHHH
Q psy6201 109 PGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKDGGKAGKKALIVDDLIATG----ASCQL 184 (220)
Q Consensus 109 ~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~~l~~G~rVLIVDDvi~TG----a~i~l 184 (220)
|... .|.-++|. +....+. .+ . +.+...+.+..+ .|+.|+++||+--|| .+.+.
T Consensus 103 ~R~~---ty~~DYg~------Ls~edR~----~l---i-----~nd~y~ID~~~l-~gk~lIflDDIkITGshE~~V~~~ 160 (274)
T PF15610_consen 103 HRNQ---TYCEDYGN------LSFEDRK----SL---I-----SNDTYHIDKEFL-SGKHLIFLDDIKITGSHEDKVRKI 160 (274)
T ss_pred cccc---Cccccccc------CCHHhhh----cc---c-----cCCceEecHHHh-CCcEEEEeccEEecCcHHHHHHHH
Confidence 2111 11112221 1111110 00 0 011223334444 899999999999999 67788
Q ss_pred HHhcCCeEEEEE
Q psy6201 185 LTTLGVDVVECF 196 (220)
Q Consensus 185 l~~~Ga~v~~v~ 196 (220)
+++.|++-..+.
T Consensus 161 ~~~~~~~~~~~y 172 (274)
T PF15610_consen 161 LKEYGLENDFIY 172 (274)
T ss_pred HHHcCccccEEE
Confidence 888887764433
No 82
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=65.15 E-value=11 Score=32.88 Aligned_cols=46 Identities=22% Similarity=0.415 Sum_probs=35.2
Q ss_pred CCCCEEEEEecccCCC----hHHHHHHhc-CCeEEEEEEEEEecCcCCceeec
Q psy6201 164 KAGKKALIVDDLIATG----ASCQLLTTL-GVDVVECFAVMELKDLNGRQKVP 211 (220)
Q Consensus 164 ~~G~rVLIVDDvi~TG----a~i~ll~~~-Ga~v~~v~vli~~~~~~g~~~l~ 211 (220)
..++.|+|+|=.++|| .+++.+++. |++-.-+.+++.-. .|.+++.
T Consensus 122 ~~~~~viv~DPMLATG~s~i~ai~~L~~~G~~~~I~~v~~vAap--eGi~~v~ 172 (210)
T COG0035 122 IDERTVIVLDPMLATGGSAIAAIDLLKKRGGPKNIKVVSLVAAP--EGIKAVE 172 (210)
T ss_pred ccCCeEEEECchhhccHhHHHHHHHHHHhCCCceEEEEEEEecH--HHHHHHH
Confidence 5789999999999999 778889999 66666666666544 4666664
No 83
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=63.83 E-value=68 Score=24.96 Aligned_cols=69 Identities=17% Similarity=0.230 Sum_probs=39.5
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKD 161 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~ 161 (220)
.+.-.+|..+|..||.++..+.-+.+-.| +. .+.+ .
T Consensus 7 ~~~~~La~~ia~~L~~~~~~~~~~~F~dG------------------------------E~------------~v~i--~ 42 (116)
T PF13793_consen 7 SSSQDLAERIAEALGIPLGKVETKRFPDG------------------------------ET------------YVRI--P 42 (116)
T ss_dssp SSGHHHHHHHHHHTTS-EE-EEEEE-TTS-------------------------------E------------EEEE--S
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEEcCCC------------------------------CE------------EEEe--c
Confidence 45567899999999999988765533222 11 1333 2
Q ss_pred CCCCCCEEEEEecccCC--C------hHHHHHHhcCCeEEE
Q psy6201 162 GGKAGKKALIVDDLIAT--G------ASCQLLTTLGVDVVE 194 (220)
Q Consensus 162 ~l~~G~rVLIVDDvi~T--G------a~i~ll~~~Ga~v~~ 194 (220)
.-.+|+.|+||-+.... - -.++.++++|++-+.
T Consensus 43 ~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a~~i~ 83 (116)
T PF13793_consen 43 ESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAGAKRIT 83 (116)
T ss_dssp S--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTTBSEEE
T ss_pred ccccCCceEEEEecCCchhHHHHHHHHHHHHHHHcCCcEEE
Confidence 23469999999988876 2 444666788875443
No 84
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=55.43 E-value=1e+02 Score=27.99 Aligned_cols=26 Identities=8% Similarity=-0.075 Sum_probs=20.7
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.-.||..+|..||+|+..+..+++
T Consensus 9 ~~~~~la~~ia~~lg~~~~~~~~~~F 34 (301)
T PRK07199 9 PGNEAAAGRLAAALGVEVGRIELHRF 34 (301)
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEEC
Confidence 45678999999999999877765543
No 85
>COG3535 Uncharacterized conserved protein [Function unknown]
Probab=53.32 E-value=2e+02 Score=27.03 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=52.4
Q ss_pred cCCCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCc--chHHHHhhhcCCCeEEEeeCCC
Q psy6201 35 STPGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGF--LFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 35 ~~~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi--~la~~lA~~lg~p~V~vRK~~k 107 (220)
+.++.-+|.+=+..+. +++.+-.+-+.+-+.... .+|.|+++|.||+ .....+|..+|+|+|-.---++
T Consensus 61 ~v~mmGAP~v~iEk~p-~g~e~~ra~e~~~~~~~k---~v~ai~s~EiGG~Ns~ip~v~aa~~g~PvVD~DgmGR 131 (357)
T COG3535 61 TVGMMGAPIVGIEKLP-NGDEAIRAFEVLEDYLGK---PVDAIISIEIGGINSLIPLVVAAQLGLPVVDGDGMGR 131 (357)
T ss_pred EecccCCchhheeeCC-CcHHHHHHHHHHHHHhCC---ceeEEEEeecCCcchhHHHHHHHhcCCceecCCcccc
Confidence 4577778887777777 777777777777777764 8999999999995 3344567889999987654443
No 86
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=52.21 E-value=1.6e+02 Score=26.96 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=22.8
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
+|++. .+.-.||..+|..||+|+..+..+++
T Consensus 8 ~i~~g-~~~~~La~~ia~~lg~~l~~~~~~~F 38 (319)
T PRK04923 8 LVFSG-NANKPLAQSICKELGVRMGKALVTRF 38 (319)
T ss_pred EEEEC-CCCHHHHHHHHHHhCCceeeeEEEEC
Confidence 44444 45678999999999999877765433
No 87
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=51.76 E-value=28 Score=29.45 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeeccc----CcchHHHHhhhcCCCeEE
Q psy6201 57 TALHCLLKCYALSLKDKIDVVYAIESR----GFLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 57 ~~l~~~la~~~~~~~~~~D~Ivgie~~----Gi~la~~lA~~lg~p~V~ 101 (220)
...+..+++.++. .++|+|+...+. |--++..+|.+||.|++.
T Consensus 94 e~~a~al~~~i~~--~~p~lVL~~~t~~~~~grdlaprlAarLga~lvs 140 (202)
T cd01714 94 LATAKALAAAIKK--IGVDLILTGKQSIDGDTGQVGPLLAELLGWPQIT 140 (202)
T ss_pred HHHHHHHHHHHHH--hCCCEEEEcCCcccCCcCcHHHHHHHHhCCCccc
Confidence 3445566666665 568988888777 889999999999999643
No 88
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=50.00 E-value=1e+02 Score=27.87 Aligned_cols=22 Identities=18% Similarity=0.069 Sum_probs=17.1
Q ss_pred chHHHHhhhcCCCeEEEeeCCC
Q psy6201 86 LFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 86 ~la~~lA~~lg~p~V~vRK~~k 107 (220)
.||..+|..||+++..+..+.+
T Consensus 2 ~lA~~ia~~lg~~l~~~~~~~F 23 (302)
T PLN02369 2 ALSQEIACYLGLELGKITIKRF 23 (302)
T ss_pred hHHHHHHHHhCCceeeeEEEEC
Confidence 4788899999999877765543
No 89
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=49.63 E-value=1.5e+02 Score=27.31 Aligned_cols=31 Identities=13% Similarity=0.178 Sum_probs=22.9
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
+|++- .+.-.+|..+|..||+++.-+..+++
T Consensus 23 ~i~~g-~~~~~la~~ia~~lg~~l~~~~~~~F 53 (330)
T PRK02812 23 RLFSG-SSNPALAQEVARYLGMDLGPMIRKRF 53 (330)
T ss_pred EEEEC-CCCHHHHHHHHHHhCCCceeeEEEEC
Confidence 34443 56789999999999999877665433
No 90
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=48.76 E-value=1e+02 Score=27.96 Aligned_cols=25 Identities=16% Similarity=0.107 Sum_probs=19.5
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKG 106 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~ 106 (220)
.+.-.+|..+|..||.++..+..+.
T Consensus 7 ~~~~~la~~ia~~lg~~~~~~~~~~ 31 (309)
T PRK01259 7 NANPELAEKIAKYLGIPLGKASVGR 31 (309)
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEE
Confidence 3557899999999999987765543
No 91
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=48.70 E-value=27 Score=32.52 Aligned_cols=26 Identities=15% Similarity=0.209 Sum_probs=22.7
Q ss_pred CccEEEeecccCcchHHHHhhhcCCCeEE
Q psy6201 73 KIDVVYAIESRGFLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 73 ~~D~Ivgie~~Gi~la~~lA~~lg~p~V~ 101 (220)
++|+|++. ||+. ....|..+|+|+++
T Consensus 93 ~p~~v~~~--Gg~v-~~~aA~~~~~p~~~ 118 (396)
T TIGR03492 93 KGDLIVAV--GDIV-PLLFAWLSGKPYAF 118 (396)
T ss_pred cCCEEEEE--CcHH-HHHHHHHcCCCceE
Confidence 79999987 9998 77778889999888
No 92
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=48.69 E-value=1.4e+02 Score=28.85 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=23.4
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
+|++- .+.-.||..+|..||+++..+.-+++
T Consensus 121 ~I~sg-s~~~~LA~~IA~~Lg~~l~~~~~~rF 151 (439)
T PTZ00145 121 ILFSG-SSNPLLSKNIADHLGTILGRVHLKRF 151 (439)
T ss_pred EEEEC-CCCHHHHHHHHHHhCCCceeeEEEEC
Confidence 44443 56789999999999999877765543
No 93
>PF11382 DUF3186: Protein of unknown function (DUF3186); InterPro: IPR021522 This bacterial family of proteins has no known function.
Probab=45.00 E-value=43 Score=30.45 Aligned_cols=39 Identities=18% Similarity=0.154 Sum_probs=31.0
Q ss_pred CCCCEEEEEec-ccCCC---hHHHHHHhcCCeEEEEEEEEEec
Q psy6201 164 KAGKKALIVDD-LIATG---ASCQLLTTLGVDVVECFAVMELK 202 (220)
Q Consensus 164 ~~G~rVLIVDD-vi~TG---a~i~ll~~~Ga~v~~v~vli~~~ 202 (220)
..|++|+||.- -...+ ++.++++.+||++.+.+.+-+.-
T Consensus 81 L~g~~V~vV~~p~a~~~~~~~v~~~L~~AGA~v~g~i~lt~~~ 123 (308)
T PF11382_consen 81 LTGRSVAVVTLPGADDEDVDAVRELLEQAGATVTGRITLTDKF 123 (308)
T ss_pred cCCCEEEEEEcCCCChHHHHHHHHHHHHCCCeEEEEEEEchhh
Confidence 58999999983 23333 88899999999999988887654
No 94
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=44.48 E-value=1.6e+02 Score=26.27 Aligned_cols=26 Identities=15% Similarity=0.231 Sum_probs=20.7
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.-.+|..+|..||+++..+..+.+
T Consensus 6 ~~~~~la~~ia~~l~~~~~~~~~~~F 31 (285)
T PRK00934 6 SASQLLASEVARLLNTELALVETKRF 31 (285)
T ss_pred CCCHHHHHHHHHHHCCceEeeEEEEC
Confidence 34568999999999999988776543
No 95
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=42.81 E-value=2.2e+02 Score=25.71 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=19.9
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKG 106 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~ 106 (220)
.+.-.+|..+|..||.|+..+..+.
T Consensus 7 ~~~~~la~~ia~~lg~~~~~~~~~~ 31 (308)
T TIGR01251 7 SSNQELAQKVAKNLGLPLGDVEVKR 31 (308)
T ss_pred CCCHHHHHHHHHHhCCeeeeeEEEE
Confidence 3556899999999999998876553
No 96
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=42.66 E-value=2.3e+02 Score=26.13 Aligned_cols=26 Identities=15% Similarity=-0.078 Sum_probs=20.5
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.+.-.||..+|..||+|+.-+..+++
T Consensus 16 ~~~~~La~~ia~~lg~~l~~~~~~~F 41 (332)
T PRK00553 16 SKAKKLVDSICRKLSMKPGEIVIQKF 41 (332)
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEEC
Confidence 45678999999999999877765543
No 97
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=41.96 E-value=2.4e+02 Score=25.74 Aligned_cols=31 Identities=13% Similarity=0.112 Sum_probs=22.5
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCCC
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k 107 (220)
.|++. .+.-.+|..+|..||+++..+..+.+
T Consensus 7 ~i~~~-~~~~~la~~ia~~lg~~l~~~~~~~F 37 (320)
T PRK02269 7 KLFAL-SSNKELAEKVAQEIGIELGKSSVRQF 37 (320)
T ss_pred EEEEC-CCCHHHHHHHHHHhCCceeeeEEEEC
Confidence 34443 45578999999999999877765543
No 98
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=41.20 E-value=31 Score=34.09 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=51.6
Q ss_pred CCCCCCCCcCCcccccc-cC----CCCcccCCCcccCc---eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecc
Q psy6201 11 PNCRSNNLTQQPEPIIT-RN----GPATYSTPGFLSPP---RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIES 82 (220)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~G~~s~~---~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~ 82 (220)
|.+....-+|..+.+.- ++ .+|.-+..|+.-.+ .|+++.+ ++....+...+...+. ..+|.|.|-=+
T Consensus 336 pd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyL--e~fa~d~~~~i~~e~~---~~PdlI~GnYs 410 (550)
T PF00862_consen 336 PDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYL--EEFADDAEREILAELQ---GKPDLIIGNYS 410 (550)
T ss_dssp TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGH--HHHHHHHHHHHHHHHT---S--SEEEEEHH
T ss_pred cCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhH--HHHHHHHHHHHHHHhC---CCCcEEEeccC
Confidence 45555555565555533 22 34544555655333 2454443 4444555555555444 47999999999
Q ss_pred cCcchHHHHhhhcCCCeEEEe
Q psy6201 83 RGFLFGPYIGQVLDIPFVPIR 103 (220)
Q Consensus 83 ~Gi~la~~lA~~lg~p~V~vR 103 (220)
.|=..|+.+|.+||+|+..+-
T Consensus 411 DgnlvA~LLs~~lgv~~~~ia 431 (550)
T PF00862_consen 411 DGNLVASLLSRKLGVTQCFIA 431 (550)
T ss_dssp HHHHHHHHHHHHHT-EEEEE-
T ss_pred cchHHHHHHHhhcCCceehhh
Confidence 999999999999999987763
No 99
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=39.70 E-value=2.9e+02 Score=25.32 Aligned_cols=30 Identities=10% Similarity=0.309 Sum_probs=22.5
Q ss_pred EEEeecccCcchHHHHhhhcCCCeEEEeeCC
Q psy6201 76 VVYAIESRGFLFGPYIGQVLDIPFVPIRKKG 106 (220)
Q Consensus 76 ~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~ 106 (220)
+|++- .+.-.||..+|..||+++..+..+.
T Consensus 11 ~i~~~-~~~~~la~~ia~~lg~~l~~~~~~~ 40 (323)
T PRK02458 11 KLFSL-NSNLEIAEKIAQAAGVPLGKLSSRQ 40 (323)
T ss_pred EEEEC-CCCHHHHHHHHHHhCCceeeeEEEE
Confidence 44444 5668899999999999987765543
No 100
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=38.87 E-value=1.5e+02 Score=27.47 Aligned_cols=69 Identities=16% Similarity=0.200 Sum_probs=45.1
Q ss_pred ccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeeeceEEEEecC
Q psy6201 82 SRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYGTDCIEVQKD 161 (220)
Q Consensus 82 ~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~le~~~~ 161 (220)
.+--.||..+|..||.|+..+.-+++-.| ++ .+++ .
T Consensus 11 ~s~~~La~~ia~~l~~~l~~~~~~rF~DG------------------------------E~------------~V~i--~ 46 (314)
T COG0462 11 SSNPELAEKIAKRLGIPLGKVEVKRFPDG------------------------------EI------------YVRI--E 46 (314)
T ss_pred CCCHHHHHHHHHHhCCCcccceeEEcCCC------------------------------cE------------EEEe--c
Confidence 35567899999999999987765544333 11 1222 2
Q ss_pred CCCCCCEEEEEecccCCC--------hHHHHHHhcCCeEEE
Q psy6201 162 GGKAGKKALIVDDLIATG--------ASCQLLTTLGVDVVE 194 (220)
Q Consensus 162 ~l~~G~rVLIVDDvi~TG--------a~i~ll~~~Ga~v~~ 194 (220)
.-.+|+.|.|+...-..- -+++.++++||.-+.
T Consensus 47 EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~k~asA~~It 87 (314)
T COG0462 47 ESVRGKDVFIIQSTSPPVNDNLMELLIMIDALKRASAKRIT 87 (314)
T ss_pred ccccCCeEEEEeCCCCCcCHHHHHHHHHHHHHHhcCCceEE
Confidence 224789999887766644 344667788886554
No 101
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=38.83 E-value=52 Score=29.03 Aligned_cols=34 Identities=32% Similarity=0.324 Sum_probs=27.8
Q ss_pred CCccEEEeecccC--cchHHHHhhhcCCCeEEEeeC
Q psy6201 72 DKIDVVYAIESRG--FLFGPYIGQVLDIPFVPIRKK 105 (220)
Q Consensus 72 ~~~D~Ivgie~~G--i~la~~lA~~lg~p~V~vRK~ 105 (220)
.++|++++=++|| +.-=...|..+|+|++++++-
T Consensus 189 ~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP 224 (248)
T PRK08057 189 HRIDVVVTKNSGGAGTEAKLEAARELGIPVVMIARP 224 (248)
T ss_pred cCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCC
Confidence 6899999999999 444456789999999998753
No 102
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=37.89 E-value=2.1e+02 Score=25.94 Aligned_cols=21 Identities=10% Similarity=0.167 Sum_probs=15.7
Q ss_pred hHHHHhhhcCCCeEEEeeCCC
Q psy6201 87 FGPYIGQVLDIPFVPIRKKGK 107 (220)
Q Consensus 87 la~~lA~~lg~p~V~vRK~~k 107 (220)
||..+|..||+++..+..+++
T Consensus 1 la~~ia~~l~~~l~~~~~~~F 21 (304)
T PRK03092 1 LAEEVAKELGVEVTPTTAYDF 21 (304)
T ss_pred CHHHHHHHhCCceeeeEEEEC
Confidence 467789999999877765543
No 103
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=37.35 E-value=74 Score=29.37 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeecccCcchHHHH-hhhcCCCeEEE
Q psy6201 57 TALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYI-GQVLDIPFVPI 102 (220)
Q Consensus 57 ~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~l-A~~lg~p~V~v 102 (220)
........+.+++ .++|+|+++..-|+++..+. |..+|+|+++.
T Consensus 75 ~~~~~~~~~~l~~--~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~ 119 (385)
T TIGR00215 75 LKIRKEVVQLAKQ--AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYY 119 (385)
T ss_pred HHHHHHHHHHHHh--cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEE
Confidence 3444455566666 78999999998888865533 45689998875
No 104
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=36.70 E-value=65 Score=28.66 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhcCCCccEEEeecccC----cchHHHHhhhcCCCeEE
Q psy6201 58 ALHCLLKCYALSLKDKIDVVYAIESRG----FLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 58 ~l~~~la~~~~~~~~~~D~Ivgie~~G----i~la~~lA~~lg~p~V~ 101 (220)
..+..|+..++. .++|+|++-.... =..+.++|..||+|++.
T Consensus 99 ~tA~~La~ai~~--~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt 144 (256)
T PRK03359 99 QTASALAAAAQK--AGFDLILCGDGSSDLYAQQVGLLVGEILNIPAIN 144 (256)
T ss_pred HHHHHHHHHHHH--hCCCEEEEcCccccCCCCcHHHHHHHHhCCCcee
Confidence 446777777776 5799998865443 35889999999999754
No 105
>KOG1503|consensus
Probab=33.97 E-value=2.8e+02 Score=25.23 Aligned_cols=106 Identities=22% Similarity=0.181 Sum_probs=57.4
Q ss_pred cEEEeecccCcchHHHHhhhcCCCeEEEeeCCCCCCchhhhhhccccceeccCCccccccCCCCCceeeeeeeeeeee-c
Q psy6201 75 DVVYAIESRGFLFGPYIGQVLDIPFVPIRKKGKLPGVVERLEYGLEYGTVLDIPFVPIRKKGKLPGVVERLEYGLEYG-T 153 (220)
Q Consensus 75 D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~~k~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~ 153 (220)
-+|++---+..--|..-|.+|.+.+.++.-+.|... ..+..|-- +-|.+.-+ .. +.+.+.- .
T Consensus 169 avivaksp~~akka~syaerlrlglavihge~k~~e------~d~~dgr~-spp~~~~~-------t~---~~~~~lp~~ 231 (354)
T KOG1503|consen 169 AVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTE------SDLVDGRH-SPPPVVTA-------TT---HPSLELPAQ 231 (354)
T ss_pred eEEEecCcchhhHHHhHHHHHhhceeEeeccccccc------cccccCCc-CCCCcccc-------cc---CccccCchh
Confidence 356666556677788889999888888876665533 22222211 01111000 00 0000000 0
Q ss_pred --e---EEEEecCCCCCCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEE
Q psy6201 154 --D---CIEVQKDGGKAGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVM 199 (220)
Q Consensus 154 --~---~le~~~~~l~~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli 199 (220)
+ -+.+..| .-|+-.++|||++..- ++.+.+++-||--.-+.+-.
T Consensus 232 ~~k~kppltvvgd--vggriaimvddiiddvqsfvaaae~lkergaykiyv~ath 284 (354)
T KOG1503|consen 232 ISKEKPPLTVVGD--VGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATH 284 (354)
T ss_pred hcccCCCeEEEec--cCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeec
Confidence 0 0111111 2467778999999887 88899999998766544433
No 106
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated
Probab=33.71 E-value=44 Score=31.78 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=46.4
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchH-HHHh---hhcCCCeEEEee
Q psy6201 44 RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFG-PYIG---QVLDIPFVPIRK 104 (220)
Q Consensus 44 ~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la-~~lA---~~lg~p~V~vRK 104 (220)
.|+..+|.+|+.++.+++.+..+.. +.|.|+.+..=|+=++ ..++ .+||+++..+-.
T Consensus 191 ~~iAr~ld~~~~~~~l~~~l~~~~~----~~~~V~~PavIGle~a~~v~~~L~~~LG~~V~~vp~ 251 (422)
T PRK05329 191 VNIARLLDDPENREALADALKPLAG----DAEAVLLPAVLGLDDDAAVLAELEEALGCPVFELPT 251 (422)
T ss_pred HHHHHHhCChhHHHHHHHHHHHhcC----CCCEEEECceecCCChHHHHHHHHHHHCCCEEEeCC
Confidence 6777788899999999998888544 5799999999999998 5555 579999877743
No 107
>PRK12342 hypothetical protein; Provisional
Probab=32.86 E-value=81 Score=28.05 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhcCCCccEEEeecccC----cchHHHHhhhcCCCeEE
Q psy6201 58 ALHCLLKCYALSLKDKIDVVYAIESRG----FLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 58 ~l~~~la~~~~~~~~~~D~Ivgie~~G----i~la~~lA~~lg~p~V~ 101 (220)
..+..|+..++. .++|+|++-.... =-.+.++|..||+|++.
T Consensus 96 ata~~La~~i~~--~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt 141 (254)
T PRK12342 96 DTAKALAAAIEK--IGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVIN 141 (254)
T ss_pred HHHHHHHHHHHH--hCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEe
Confidence 346667777776 5699998865443 34688999999999754
No 108
>PF09651 Cas_APE2256: CRISPR-associated protein (Cas_APE2256); InterPro: IPR013442 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a conserved region of about 150 amino acids found in a family of Cas proteins in at least five archaeal and three bacterial species. In six of eight species, the protein is encoded the vicinity of a CRISPR/Cas locus.; PDB: 3QYF_A.
Probab=32.81 E-value=1e+02 Score=24.54 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhh-cCCCccEEEeecccC----cchHHHHhhhcCCCeEEEeeC
Q psy6201 56 STALHCLLKCYALS-LKDKIDVVYAIESRG----FLFGPYIGQVLDIPFVPIRKK 105 (220)
Q Consensus 56 ~~~l~~~la~~~~~-~~~~~D~Ivgie~~G----i~la~~lA~~lg~p~V~vRK~ 105 (220)
+..+.+.+.+.+.. .+...++++.+ ||| +++++.+|+..+.|.+++-..
T Consensus 73 l~~Lv~~~~~~v~~~~~~~~~v~~n~-TGGfK~~~~~~~~~g~~~~~~v~Yi~E~ 126 (136)
T PF09651_consen 73 LRNLVRWVAEEVKNYKGRGYEVIFNA-TGGFKAEIAYLTLLGMLYGDPVYYIFEE 126 (136)
T ss_dssp HHHHHHHTHHHHHHHHHTT-EEEEE--SSS-HHHHHHHHHHHHHT--EEEEEETT
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEe-CCChHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 33455555555541 11345555555 899 688999999999999998643
No 109
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion]
Probab=32.51 E-value=75 Score=29.87 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=26.1
Q ss_pred CCccEEEeecccC--cchHHHHhhhcCCCeEEEee
Q psy6201 72 DKIDVVYAIESRG--FLFGPYIGQVLDIPFVPIRK 104 (220)
Q Consensus 72 ~~~D~Ivgie~~G--i~la~~lA~~lg~p~V~vRK 104 (220)
.++|+|+|+- || +=.|=.+|..+|+|||.+=-
T Consensus 83 ~~~d~vIGVG-GGk~iD~aK~~A~~~~~pfIsvPT 116 (360)
T COG0371 83 DGADVVIGVG-GGKTIDTAKAAAYRLGLPFISVPT 116 (360)
T ss_pred cCCCEEEEec-CcHHHHHHHHHHHHcCCCEEEecC
Confidence 4789999993 44 66788899999999998844
No 110
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=29.83 E-value=52 Score=26.30 Aligned_cols=42 Identities=24% Similarity=0.171 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhcCCCccEEEee-cccCcchHHHHhhhcCCCeEE
Q psy6201 58 ALHCLLKCYALSLKDKIDVVYAI-ESRGFLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 58 ~l~~~la~~~~~~~~~~D~Ivgi-e~~Gi~la~~lA~~lg~p~V~ 101 (220)
..+..+++.+++ .++|+|+.. ...|--++..+|.+||.|++.
T Consensus 77 ~~a~~l~~~~~~--~~~~lVl~~~t~~g~~la~~lA~~L~~~~v~ 119 (164)
T PF01012_consen 77 AYADALAELIKE--EGPDLVLFGSTSFGRDLAPRLAARLGAPLVT 119 (164)
T ss_dssp HHHHHHHHHHHH--HT-SEEEEESSHHHHHHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHHHh--cCCCEEEEcCcCCCCcHHHHHHHHhCCCccc
Confidence 345566666665 578866555 446677999999999999755
No 111
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=26.79 E-value=1.1e+02 Score=24.87 Aligned_cols=42 Identities=24% Similarity=0.311 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhcCCCccEEEee-cccCcchHHHHhhhcCCCeEE
Q psy6201 58 ALHCLLKCYALSLKDKIDVVYAI-ESRGFLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 58 ~l~~~la~~~~~~~~~~D~Ivgi-e~~Gi~la~~lA~~lg~p~V~ 101 (220)
..+..+++.+++ .++|+|+.. ...|=-++..+|.+||.|++.
T Consensus 78 ~~a~~l~~~i~~--~~p~~Vl~g~t~~g~~la~rlA~~L~~~~vs 120 (181)
T cd01985 78 ATAKALAALIKK--EKPDLILAGATSIGKQLAPRVAALLGVPQIS 120 (181)
T ss_pred HHHHHHHHHHHH--hCCCEEEECCcccccCHHHHHHHHhCCCcce
Confidence 445556666665 468866554 456778999999999999744
No 112
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=26.25 E-value=1.3e+02 Score=24.22 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeec-ccCcchHHHHhhhcCCCeEE
Q psy6201 57 TALHCLLKCYALSLKDKIDVVYAIE-SRGFLFGPYIGQVLDIPFVP 101 (220)
Q Consensus 57 ~~l~~~la~~~~~~~~~~D~Ivgie-~~Gi~la~~lA~~lg~p~V~ 101 (220)
...+..+++.+++ .++|+|+... ..|--++..+|.+||.|++.
T Consensus 69 ~~~a~al~~~i~~--~~p~~Vl~~~t~~g~~la~rlAa~L~~~~vt 112 (168)
T cd01715 69 EPYAPALVALAKK--EKPSHILAGATSFGKDLAPRVAAKLDVGLIS 112 (168)
T ss_pred HHHHHHHHHHHHh--cCCCEEEECCCccccchHHHHHHHhCCCcee
Confidence 4456666666666 5688666554 46778999999999999744
No 113
>PF06032 DUF917: Protein of unknown function (DUF917); InterPro: IPR010318 This family consists of hypothetical bacterial and archaeal proteins of unknown function.; PDB: 2O3I_B.
Probab=26.16 E-value=91 Score=29.02 Aligned_cols=68 Identities=22% Similarity=0.135 Sum_probs=38.9
Q ss_pred CCcccCceeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcc--hHHHHhhhcCCCeEEEeeCCCC
Q psy6201 37 PGFLSPPRDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFL--FGPYIGQVLDIPFVPIRKKGKL 108 (220)
Q Consensus 37 ~G~~s~~~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~--la~~lA~~lg~p~V~vRK~~k~ 108 (220)
.+.-||-.-..++. ++..+..+.+.+.++.. .+++.|+.+|.+|.- .+..+|..+|+|+|-.---++.
T Consensus 59 ~~~GsP~v~~E~lp-~g~e~~~a~~~le~~~g---~~~~av~~~EiGG~N~~~pl~~Aa~~GlPvvDaD~mGRA 128 (353)
T PF06032_consen 59 GMMGSPTVSVEKLP-SGDEALRAVEALEKYLG---RKIDAVIPIEIGGSNGLNPLLAAAQLGLPVVDADGMGRA 128 (353)
T ss_dssp EEEE-HHHTT-SS--HHHHHHHHHHHHHHHTT-----EEEEE-SSSSCCHHHHHHHHHHHHT-EEESB-SSSS-
T ss_pred EEeCCChHHhccCC-CchHHHHHHHHHHHhhC---CCccEEeehhcCccchhHHHHHHHHhCCCEEcCCccccc
Confidence 44446644444444 55566666666666554 579999999999954 3444577899998876544443
No 114
>PF10490 CENP-F_C_Rb_bdg: Rb-binding domain of kinetochore protein Cenp-F/LEK1; InterPro: IPR018302 This entry represents the Rb protein-binding domain from the centromere protein Cenp-F. Cenp-F is a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, that is involved in chromosome segregation during mitosis and is essential for the full functioning of the mitotic checkpoint pathway [, ]. Cenp-F interacts with retinoblastoma protein (RB), CENP-E and BUBR1. This domain is at the very C terminus of the C-terminal coiled-coil region, and binds to the Rb family of tumour suppressors [].
Probab=25.89 E-value=38 Score=22.73 Aligned_cols=18 Identities=28% Similarity=0.202 Sum_probs=14.7
Q ss_pred ccCCCCcccCCCcccCcee
Q psy6201 27 TRNGPATYSTPGFLSPPRD 45 (220)
Q Consensus 27 ~~~~~~~~~~~G~~s~~~D 45 (220)
-.++|+|+| +|..|||+=
T Consensus 21 V~kGFADIP-tgk~sPyil 38 (49)
T PF10490_consen 21 VKKGFADIP-TGKTSPYIL 38 (49)
T ss_pred HHhccccCC-CCCCCceEE
Confidence 357899999 899999953
No 115
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=25.38 E-value=1.2e+02 Score=26.88 Aligned_cols=38 Identities=21% Similarity=0.140 Sum_probs=28.6
Q ss_pred HHhhcCCCccEEEeecccCc---chHHHHhhhcCCCeEEEeeC
Q psy6201 66 YALSLKDKIDVVYAIESRGF---LFGPYIGQVLDIPFVPIRKK 105 (220)
Q Consensus 66 ~~~~~~~~~D~Ivgie~~Gi---~la~~lA~~lg~p~V~vRK~ 105 (220)
.+++ .++|++++=++||- .-=...|..+|+|++++++.
T Consensus 192 l~~~--~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP 232 (256)
T TIGR00715 192 LLRE--YRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARP 232 (256)
T ss_pred HHHH--cCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCC
Confidence 3444 68999999999663 33446788999999998754
No 116
>PTZ00331 alpha/beta hydrolase; Provisional
Probab=24.32 E-value=76 Score=26.95 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.5
Q ss_pred CCCCCCCEEEEEecccCCC------hHHHHHHhcCCeEEE
Q psy6201 161 DGGKAGKKALIVDDLIATG------ASCQLLTTLGVDVVE 194 (220)
Q Consensus 161 ~~l~~G~rVLIVDDvi~TG------a~i~ll~~~Ga~v~~ 194 (220)
+....|-+|.|+.|.+++- ++++.++..|++++.
T Consensus 166 ~a~~~g~~v~vv~Da~~~~~~~~~~~al~~~~~~g~~v~~ 205 (212)
T PTZ00331 166 DAVKLGFKVVVLEDATRAVDPDAISKQRAELLEAGVILLT 205 (212)
T ss_pred HHHHCCCEEEEeCcCccCCCHHHHHHHHHHHHHCCCEEEe
Confidence 3446899999999999887 778888999998765
No 117
>PF04189 Gcd10p: Gcd10p family; InterPro: IPR007316 eIF-3 is a multisubunit complex that stimulates translation initiation in vitro at several different steps. This family corresponds to the gamma subunit of eIF3 [, ].; GO: 0003743 translation initiation factor activity, 0006413 translational initiation
Probab=22.91 E-value=1.6e+02 Score=26.85 Aligned_cols=28 Identities=29% Similarity=0.484 Sum_probs=21.8
Q ss_pred CCCCCCEEEEEecccCCC-hHHHHHHhcCCe
Q psy6201 162 GGKAGKKALIVDDLIATG-ASCQLLTTLGVD 191 (220)
Q Consensus 162 ~l~~G~rVLIVDDvi~TG-a~i~ll~~~Ga~ 191 (220)
.+..|.||||||| +.| -+..++++.|+.
T Consensus 198 NV~~g~r~Lv~D~--~~GLv~aav~eRmgg~ 226 (299)
T PF04189_consen 198 NVHAGGRVLVVDD--CGGLVVAAVAERMGGS 226 (299)
T ss_pred CCCCCCeEEEEeC--CCChHHHHHHHHhCCC
Confidence 3468999999999 666 555677888874
No 118
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=22.73 E-value=2.3e+02 Score=25.24 Aligned_cols=44 Identities=20% Similarity=0.162 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhcCCCccEEEeecccCcchHHH-HhhhcCCCeEEEe
Q psy6201 58 ALHCLLKCYALSLKDKIDVVYAIESRGFLFGPY-IGQVLDIPFVPIR 103 (220)
Q Consensus 58 ~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~-lA~~lg~p~V~vR 103 (220)
.....+.+.++. .++|+|++..+.+++...+ .+...|+|+++..
T Consensus 72 ~~~~~~~~~l~~--~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~ 116 (380)
T PRK00025 72 KIRRRLKRRLLA--EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYV 116 (380)
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEe
Confidence 344455566666 7899999988766655433 2456799987764
No 119
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=22.52 E-value=2.5e+02 Score=24.69 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcch-HHHHhhhcCCCeEEE
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLF-GPYIGQVLDIPFVPI 102 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~l-a~~lA~~lg~p~V~v 102 (220)
.....+...+.+.+.. .++|+|.+.......+ +...|..+|+|++..
T Consensus 71 ~~~~~~~~~l~~~l~~--~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~ 118 (363)
T cd03786 71 AQTAGLLIGLEAVLLE--EKPDLVLVLGDTNETLAAALAAFKLGIPVAHV 118 (363)
T ss_pred HHHHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 4455556666677776 6899999985444444 445566789998875
No 120
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=22.49 E-value=2.2e+02 Score=25.44 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEeecccCcch-HHHHhhhcCCCeEEE
Q psy6201 54 AASTALHCLLKCYALSLKDKIDVVYAIESRGFLF-GPYIGQVLDIPFVPI 102 (220)
Q Consensus 54 ~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~l-a~~lA~~lg~p~V~v 102 (220)
+.+..+...|++.+.. .++|+|.+--...-.+ |..+|..+|+|++.+
T Consensus 69 ~~~~~~~~~l~~~l~~--~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 69 EITSNMLEGLEELLLE--EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 4444555677777877 7899999984444444 555677889999866
No 121
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=22.37 E-value=1.7e+02 Score=21.90 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=29.3
Q ss_pred HHHHHHhhcCCCccEEEeecccC-cchHHHHhhhcC-CCeEEEe
Q psy6201 62 LLKCYALSLKDKIDVVYAIESRG-FLFGPYIGQVLD-IPFVPIR 103 (220)
Q Consensus 62 ~la~~~~~~~~~~D~Ivgie~~G-i~la~~lA~~lg-~p~V~vR 103 (220)
.+.+.+++ .++|+|-+-...+ ..+|...+..++ +|+++.-
T Consensus 65 ~l~k~ik~--~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~ 106 (139)
T PF13477_consen 65 RLRKIIKK--EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTV 106 (139)
T ss_pred HHHHHhcc--CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEe
Confidence 66777777 7899998887776 455666667788 8888654
No 122
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=21.92 E-value=1.5e+02 Score=26.19 Aligned_cols=38 Identities=29% Similarity=0.321 Sum_probs=28.4
Q ss_pred HHhhcCCCccEEEeecccCcchHH--HHhhhcCCCeEEEeeC
Q psy6201 66 YALSLKDKIDVVYAIESRGFLFGP--YIGQVLDIPFVPIRKK 105 (220)
Q Consensus 66 ~~~~~~~~~D~Ivgie~~Gi~la~--~lA~~lg~p~V~vRK~ 105 (220)
.+++ .++|++++=++||-..-. ..|..+|+|++++++-
T Consensus 189 l~~~--~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP 228 (249)
T PF02571_consen 189 LFRQ--YGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRP 228 (249)
T ss_pred HHHH--cCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCC
Confidence 3445 689999999999873222 3478899999998753
No 123
>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity. Polymerase gamma replicates and repairs mitochondrial DNA. The c-terminal domain of its B subunit is strikingly similar to the anticodon-binding domain of glycyl tRNA synthetase.
Probab=21.83 E-value=3.9e+02 Score=20.85 Aligned_cols=66 Identities=17% Similarity=0.002 Sum_probs=40.6
Q ss_pred CCcccCc-eeccCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccC-cchHHHH--hhhcCCCeEE-Eee
Q psy6201 37 PGFLSPP-RDIFSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRG-FLFGPYI--GQVLDIPFVP-IRK 104 (220)
Q Consensus 37 ~G~~s~~-~D~~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~G-i~la~~l--A~~lg~p~V~-vRK 104 (220)
|-..+|| +.+..+-.+-+.+...++.+.+.+.. .++++.+..-... --+|.-. +...|+|+.+ +-+
T Consensus 22 P~~iAP~qV~Iipi~~~~~~~~~~a~~l~~~L~~--~gi~v~~D~r~~~~~~~G~k~~~~dliGiP~~I~IG~ 92 (128)
T cd02426 22 HPCLAPYKVAIDCGKGDTAELRDLCQGLKNELRE--AGLSVWPGYLETQHSSLEQLLDKYDEMGVLFTLLISE 92 (128)
T ss_pred CCCCCCeEEEEEeccCChHHHHHHHHHHHHHHHH--cCCEEEeccCcccccCHHHHHHhhhhcCCCEEEEECC
Confidence 3456688 66666633335677788888888877 5677666553320 1234444 6789999855 443
No 124
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=21.53 E-value=2.4e+02 Score=23.65 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=35.2
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCccEEEeecccCcchHHHHhhhcCCCeEEEeeC
Q psy6201 47 FSVYRDQAASTALHCLLKCYALSLKDKIDVVYAIESRGFLFGPYIGQVLDIPFVPIRKK 105 (220)
Q Consensus 47 ~~~l~~p~~~~~l~~~la~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~vRK~ 105 (220)
.++..+|...- ..+.+.+.+...+...++|.-.||+ +|+.+|...++|-|.+-..
T Consensus 36 p~l~~~p~~a~---~~l~~~i~~~~~~~~~liGSSlGG~-~A~~La~~~~~~avLiNPa 90 (187)
T PF05728_consen 36 PDLPPFPEEAI---AQLEQLIEELKPENVVLIGSSLGGF-YATYLAERYGLPAVLINPA 90 (187)
T ss_pred CCCCcCHHHHH---HHHHHHHHhCCCCCeEEEEEChHHH-HHHHHHHHhCCCEEEEcCC
Confidence 33444555554 3334444442123368999988887 7888999999999888643
No 125
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=21.43 E-value=2.2e+02 Score=25.69 Aligned_cols=29 Identities=17% Similarity=0.286 Sum_probs=22.4
Q ss_pred CCccEEEeecccCcchHHHHhhhcCCCeEEE
Q psy6201 72 DKIDVVYAIESRGFLFGPYIGQVLDIPFVPI 102 (220)
Q Consensus 72 ~~~D~Ivgie~~Gi~la~~lA~~lg~p~V~v 102 (220)
.++|+|+.-. ..+.|..+|..+|+|+|..
T Consensus 91 ~~pDlVi~d~--~~~~~~~~A~~~giP~v~~ 119 (392)
T TIGR01426 91 DRPDLIVYDI--ASWTGRLLARKWDVPVISS 119 (392)
T ss_pred CCCCEEEECC--ccHHHHHHHHHhCCCEEEE
Confidence 5799887653 3457888899999998765
No 126
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=21.29 E-value=1.1e+02 Score=24.13 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=26.9
Q ss_pred CCCCCCCEEEEEecccCCC------hHHHHHHhcCCeEEE
Q psy6201 161 DGGKAGKKALIVDDLIATG------ASCQLLTTLGVDVVE 194 (220)
Q Consensus 161 ~~l~~G~rVLIVDDvi~TG------a~i~ll~~~Ga~v~~ 194 (220)
+....|-+|.|+.|.+++- .+++.++..|++|+.
T Consensus 132 ~a~~~g~~v~v~~Da~~~~~~~~h~~~l~~l~~~~~~v~t 171 (174)
T PF00857_consen 132 DAFDRGYRVIVVEDACASYSPEAHEAALEELRKRGAEVIT 171 (174)
T ss_dssp HHHHTT-EEEEEEEEEEBSSHHHHHHHHHHHHHHTSEEE-
T ss_pred HHHHCCCEEEEEChhhcCCCHHHHHHHHHHHHhCCCEEEe
Confidence 3446899999999999888 778888899998864
No 127
>cd01011 nicotinamidase Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).
Probab=20.48 E-value=79 Score=26.33 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=25.6
Q ss_pred CCCCCCEEEEEecccCCC------hHHHHHHhcCCeEE
Q psy6201 162 GGKAGKKALIVDDLIATG------ASCQLLTTLGVDVV 193 (220)
Q Consensus 162 ~l~~G~rVLIVDDvi~TG------a~i~ll~~~Ga~v~ 193 (220)
....|-+|.|+.|..++- ++++.++..|++++
T Consensus 159 a~~~g~~v~v~~Da~~~~~~~~~~~al~~~~~~G~~i~ 196 (196)
T cd01011 159 ALKAGFEVRVLEDACRAVDPETIERAIEEMKEAGVVLV 196 (196)
T ss_pred HHHCCCEEEEeccccCCCCHHHHHHHHHHHHHccCEEC
Confidence 335799999999999987 66777888888763
No 128
>KOG1017|consensus
Probab=20.08 E-value=2.1e+02 Score=25.20 Aligned_cols=53 Identities=19% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCCEEEEEecccCCC----hHHHHHHhcCCeEEEEEEEEEe-cCcCCceee-c-eeeEEee
Q psy6201 165 AGKKALIVDDLIATG----ASCQLLTTLGVDVVECFAVMEL-KDLNGRQKV-P-SKVVSLL 218 (220)
Q Consensus 165 ~G~rVLIVDDvi~TG----a~i~ll~~~Ga~v~~v~vli~~-~~~~g~~~l-~-~~v~sL~ 218 (220)
.-+|||+.=-+++|| .+++.++++|..-...+ ++.. ....|...+ + +|...++
T Consensus 188 ~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~Ii-L~sLF~tP~gak~i~~~fP~itil 247 (267)
T KOG1017|consen 188 TSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNII-LVSLFITPTGAKNITRKFPYITIL 247 (267)
T ss_pred cceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEE-EEEeeecchhhHHHHHhCCeEEEE
Confidence 457999999999999 66777889987655433 3332 122344444 2 5655544
No 129
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=20.03 E-value=1.1e+02 Score=24.23 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=27.9
Q ss_pred CCCCCCCEEEEEecccCCC------hHHHHHHhcCCeEEE
Q psy6201 161 DGGKAGKKALIVDDLIATG------ASCQLLTTLGVDVVE 194 (220)
Q Consensus 161 ~~l~~G~rVLIVDDvi~TG------a~i~ll~~~Ga~v~~ 194 (220)
+....|-+|.++.|..+|- .+++.++..|++++.
T Consensus 108 ~a~~~g~~v~v~~Da~as~~~~~h~~al~~~~~~~~~v~~ 147 (157)
T cd01012 108 DLLEEGYEVFVVADACGSRSKEDHELALARMRQAGAVLTT 147 (157)
T ss_pred HHHHCCCEEEEEeeCCCCCCHHHHHHHHHHHHHCCCEEee
Confidence 3446799999999999998 667788888988764
Done!