BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6203
(568 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 240/326 (73%), Gaps = 1/326 (0%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKH 62
Y +L Y L T+G+GGFAKVKLA H+LTGE VAIKIM K TLG DLPR+K EI ALK+
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKN 64
Query: 63 ISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
+ HQHIC+L+ V+ET++ IFMV+EYCPGGEL D+I+ + RL E+E+R FRQI+SAVAY+
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
H GYAHRDLKPEN+L D LKLIDFGLCAKP+G + LQT CGS YAAPE+I+GK
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y GSE DVWSMG++LY L+CGFLPFD D++ LY KI+ GKY P W+SP+S +++ M
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDDMW 302
LQV+P KRI +++LL H W+ M + PV ++ + DDD + ++ H + + M
Sbjct: 245 LQVDPKKRISMKNLLNHPWI-MQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTME 303
Query: 303 SQLNEWTYNYDTCTYLLLLSRKKQGK 328
++ W Y++ T TYLLLL++K +GK
Sbjct: 304 DLISLWQYDHLTATYLLLLAKKARGK 329
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 469
K Y GSE DVWSMG++LY L+CGFLPFD D++ LY KI+ GKY P W+SP+S +++
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQ 242
Query: 470 SMLQVEPGKRIKIQDLLGHNWVKMG-------PEDNPLREKDDDVIKVMADHKQLSPDDM 522
MLQV+P KRI +++LL H W+ NP DDD + ++ H + + M
Sbjct: 243 QMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTM 302
Query: 523 WSQLNEWTYNYDTCTYLLLLSRKKQGLPLRL 553
++ W Y++ T TYLLLL++K +G P+RL
Sbjct: 303 EDLISLWQYDHLTATYLLLLAKKARGKPVRL 333
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 310 YNYDTCTYLLLLSRKK--QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y+ TC L + + QGK Y GSE DVWSMG++LY L+CGFLPFD D++ LY KI+
Sbjct: 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 200/335 (59%), Gaps = 20/335 (5%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQ 66
YIL T+G G F KVK+ H LTG KVA+KI+ + + + + +++ EI LK H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI KL+QVI T S IFMV+EY GGEL D+I + RL EKESR F+QILS V Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKPENVLLD + N K+ DFGL G L+ SCGSPNYAAPEVI G+ Y G
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E D+WS GV+LYALLCG LPFD D + L+ KI +G + P +++P+ +++ MLQV+
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVD 254
Query: 247 PGKRIKIQDLLGHNWVK------MGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDD 300
P KR I+D+ H W K + PED P + DD+ +K + + + S ++
Sbjct: 255 PMKRATIKDIREHEWFKQDLPKYLFPED------PSYSSTMIDDEALKEVCEKFECSEEE 308
Query: 301 MWSQL-NEWTYNYDTCTYLLLLSRKK---QGKQYY 331
+ S L N + Y L++ ++ + K +Y
Sbjct: 309 VLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFY 343
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 468
S + Y G E D+WS GV+LYALLCG LPFD D + L+ KI +G + P +++P+ ++
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLL 247
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVK------MGPEDNPLREK--DDDVIKVMADHKQLSPD 520
+ MLQV+P KR I+D+ H W K + PED DD+ +K + + + S +
Sbjct: 248 KHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEE 307
Query: 521 DMWSQL 526
++ S L
Sbjct: 308 EVLSCL 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
G+ Y G E D+WS GV+LYALLCG LPFD D + L+ KI
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI 228
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 196/314 (62%), Gaps = 4/314 (1%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQ 66
Y L +T+G G FAKVKLA H+LTG +VAIKI+ K L L ++ E+ +K ++H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I KLF+VIET +++++EY GGE+ D++V R+ EKE+R+ FRQI+SAV Y H
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLK EN+LLD + N+K+ DFG + G +L T CGSP YAAPE+ +GK+Y G
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L +
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 249
Query: 247 PGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQLN 306
P KR ++ ++ W+ G E++ + + EL D I +M S +++ L+
Sbjct: 250 PIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMG-YSQEEIQESLS 308
Query: 307 EWTYNYDTCTYLLL 320
+ Y+ T TYLLL
Sbjct: 309 KMKYDEITATYLLL 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 23/158 (14%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN---PLREKDDDVIKVM 511
P +MS + +++ L + P KR ++ ++ W+ G E++ P E + D+
Sbjct: 229 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDI---- 284
Query: 512 ADHKQL--------SPDDMWSQLNEWTYNYDTCTYLLL 541
+D K++ S +++ L++ Y+ T TYLLL
Sbjct: 285 SDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLL 322
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 242
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ +L P K G + +++
Sbjct: 243 KRFL--VLNPIKRGTLEQIMK 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 5/258 (1%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQ 66
Y + +T+G G F KVKLA H TG+KVA+KI+ K L + R++ EI+ L+ + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI KL+ VI++ I MVIEY G EL D+IV+R ++ E+E+R FF+QI+SAV Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKPEN+LLD + N+K+ DFGL G + L+TSCGSPNYAAPEVI GK Y G
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E DVWS GV+LY +LC LPFD +SI L+ I NG YT P ++SP + +++ ML V
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 247 PGKRIKIQDLLGHNWVKM 264
P RI I +++ +W K+
Sbjct: 242 PLNRISIHEIMQDDWFKV 259
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
Query: 396 NLLRSAIVLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 447
N L+++ C +P S K Y G E DVWS GV+LY +LC LPFD +SI L+
Sbjct: 157 NFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 213
Query: 448 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
I NG YT P ++SP + +++ ML V P RI I +++ +W K+
Sbjct: 214 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 259
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
GK Y G E DVWS GV+LY +LC LPFD +SI L+ I
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 5/258 (1%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQ 66
Y + +T+G G F KVKLA H TG+KVA+KI+ K L + R++ EI+ L+ + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI KL+ VI++ I MVIEY G EL D+IV+R ++ E+E+R FF+QI+SAV Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKPEN+LLD + N+K+ DFGL G + L+TSCGSPNYAAPEVI GK Y G
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E DVWS GV+LY +LC LPFD +SI L+ I NG YT P ++SP + +++ ML V
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 247 PGKRIKIQDLLGHNWVKM 264
P RI I +++ +W K+
Sbjct: 251 PLNRISIHEIMQDDWFKV 268
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
Query: 396 NLLRSAIVLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 447
N L+++ C +P S K Y G E DVWS GV+LY +LC LPFD +SI L+
Sbjct: 166 NFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222
Query: 448 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
I NG YT P ++SP + +++ ML V P RI I +++ +W K+
Sbjct: 223 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
GK Y G E DVWS GV+LY +LC LPFD +SI L+ I
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 5/258 (1%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQ 66
Y + +T+G G F KVKLA H TG+KVA+KI+ K L + R++ EI+ L+ + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI KL+ VI++ I MVIEY G EL D+IV+R ++ E+E+R FF+QI+SAV Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKPEN+LLD + N+K+ DFGL G + L+TSCGSPNYAAPEVI GK Y G
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E DVWS GV+LY +LC LPFD +SI L+ I NG YT P ++SP + +++ ML V
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 247 PGKRIKIQDLLGHNWVKM 264
P RI I +++ +W K+
Sbjct: 252 PLNRISIHEIMQDDWFKV 269
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
Query: 396 NLLRSAIVLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 447
N L+++ C +P S K Y G E DVWS GV+LY +LC LPFD +SI L+
Sbjct: 167 NFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 223
Query: 448 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
I NG YT P ++SP + +++ ML V P RI I +++ +W K+
Sbjct: 224 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
GK Y G E DVWS GV+LY +LC LPFD +SI L+ I
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 5/258 (1%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQ 66
Y + +T+G G F KVKLA H TG+KVA+KI+ K L + R++ EI+ L+ + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI KL+ VI++ I MVIEY G EL D+IV+R ++ E+E+R FF+QI+SAV Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKPEN+LLD + N+K+ DFGL G + L+TSCGSPNYAAPEVI GK Y G
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
E DVWS GV+LY +LC LPFD +SI L+ I NG YT P ++SP + +++ ML V
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 247 PGKRIKIQDLLGHNWVKM 264
P RI I +++ +W K+
Sbjct: 246 PLNRISIHEIMQDDWFKV 263
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
Query: 396 NLLRSAIVLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 447
N L+++ C +P S K Y G E DVWS GV+LY +LC LPFD +SI L+
Sbjct: 161 NFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 217
Query: 448 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
I NG YT P ++SP + +++ ML V P RI I +++ +W K+
Sbjct: 218 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
GK Y G E DVWS GV+LY +LC LPFD +SI L+ I
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 195/312 (62%), Gaps = 4/312 (1%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHI 68
Y L +T+G G FAKVKLA H+LTG +VAIKI+ K L L ++ E+ +K ++H +I
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
KLF+VIET +++++EY GGE+ D++V R+ EKE+R+ FRQI+SAV Y H
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLK EN+LLD + N+K+ DFG + G +L CG+P YAAPE+ +GK+Y G E
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 189 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 248
DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPI 254
Query: 249 KRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQLNEW 308
KR ++ ++ W+ G E++ + + EL D I +M S +++ L++
Sbjct: 255 KRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMG-YSQEEIQESLSKM 313
Query: 309 TYNYDTCTYLLL 320
Y+ T TYLLL
Sbjct: 314 KYDEITATYLLL 325
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 23/158 (14%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C AP K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN---PLREKDDDVIKVM 511
P +MS + +++ L + P KR ++ ++ W+ G E++ P E + D+
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDI---- 287
Query: 512 ADHKQL--------SPDDMWSQLNEWTYNYDTCTYLLL 541
+D K++ S +++ L++ Y+ T TYLLL
Sbjct: 288 SDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLL 325
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 245
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ +L P K G + +++
Sbjct: 246 KRFL--VLNPIKRGTLEQIMK 264
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 198/317 (62%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA+KI+ K L L ++ E+ +K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L T CGSP YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V+ PD+ KD ++M + +++
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDY----KDPRRTELMVSM-GYTREEIQD 307
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 308 SLVGQRYNEVMATYLLL 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDD 506
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 231 RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPR 290
Query: 507 VIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 291 RTELMVSM-GYTREEIQDSLVGQRYNEVMATYLLL 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 245 KKFL--ILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 197/317 (62%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA+KI+ K L L ++ E+ +K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L T CGSP YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V PD+ KD ++M + +++
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDY----KDPRRTELMVSM-GYTREEIQD 307
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 308 SLVGQRYNEVMATYLLL 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDD 506
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 231 RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
Query: 507 VIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 291 RTELMVSM-GYTREEIQDSLVGQRYNEVMATYLLL 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 245 KKFL--ILNPSKRGTLEQIMK 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 170/271 (62%), Gaps = 7/271 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISH 65
Y+L T+G G F KVK+ H LTG KVA+KI+ + + + + ++K EI LK H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
HI KL+QVI T + FMV+EY GGEL D+I + R+ E E+R F+QILSAV Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLKPENVLLD + N K+ DFGL G L+TSCGSPNYAAPEVI G+ Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRTSCGSPNYAAPEVISGRLYA 188
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
G E D+WS GV+LYALLCG LPFD + + L+ KI G + P +++ + ++ MLQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPD 276
+P KR I+D+ H W K +D P P+
Sbjct: 249 DPLKRATIKDIREHEWFK---QDLPSYLFPE 276
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 468
S + Y G E D+WS GV+LYALLCG LPFD + + L+ KI G + P +++ + ++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVK 492
MLQV+P KR I+D+ H W K
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFK 266
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
G+ Y G E D+WS GV+LYALLCG LPFD + + L+ KI
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 197/317 (62%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA++I+ K L L ++ E+ +K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L T CGSP YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V PD+ KD ++M + +++
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDY----KDPRRTELMVSMG-YTREEIQD 307
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 308 SLVGQRYNEVMATYLLL 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDD 506
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 231 RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
Query: 507 VIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 291 RTELMVSMG-YTREEIQDSLVGQRYNEVMATYLLL 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 245 KKFL--ILNPSKRGTLEQIMK 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 169/271 (62%), Gaps = 7/271 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISH 65
Y+L T+G G F KVK+ H LTG KVA+KI+ + + + + ++K EI LK H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
HI KL+QVI T + FMV+EY GGEL D+I + R+ E E+R F+QILSAV Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLKPENVLLD + N K+ DFGL G L+ SCGSPNYAAPEVI G+ Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPEVISGRLYA 188
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
G E D+WS GV+LYALLCG LPFD + + L+ KI G + P +++ + ++ MLQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPD 276
+P KR I+D+ H W K +D P P+
Sbjct: 249 DPLKRATIKDIREHEWFK---QDLPSYLFPE 276
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 468
S + Y G E D+WS GV+LYALLCG LPFD + + L+ KI G + P +++ + ++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVK 492
MLQV+P KR I+D+ H W K
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFK 266
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
G+ Y G E D+WS GV+LYALLCG LPFD + + L+ KI
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 196/317 (61%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA+KI+ K L L ++ E+ +K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L CG+P YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V PD+ KD ++M + +++
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDY----KDPRRTELMVSM-GYTREEIQD 307
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 308 SLVGQRYNEVMATYLLL 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C AP K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDD 506
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 231 RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
Query: 507 VIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 291 RTELMVSM-GYTREEIQDSLVGQRYNEVMATYLLL 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 245 KKFL--ILNPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 196/317 (61%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA++I+ K L L ++ E+ +K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L CGSP YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V PD+ KD ++M + +++
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDY----KDPRRTELMVSMG-YTREEIQD 307
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 308 SLVGQRYNEVMATYLLL 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 404 LCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDDV 507
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRR 291
Query: 508 IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 292 TELMVSMG-YTREEIQDSLVGQRYNEVMATYLLL 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 245 KKFL--ILNPSKRGTLEQIMK 263
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 190/315 (60%), Gaps = 10/315 (3%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLP-RVKLEINALKHISHQH 67
YI+ T+G G F KVKLATH T +KVA+K + + L + D+ RV+ EI+ LK + H H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KL+ VI T + I MVIEY GGEL D+IVE++R+ E E R FF+QI+ A+ Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLKPEN+LLD N N+K+ DFGL G + L+TSCGSPNYAAPEVI GK Y G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS G++LY +L G LPFD + I L+ K+ + Y P ++SP ++ ++R M+ +P
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADP 247
Query: 248 GKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREK--DDDVIKVMADHKQLSPDDMWSQL 305
+RI IQ++ W + + P RP E++ D ++ + + S D + L
Sbjct: 248 MQRITIQEIRRDPWFNV---NLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEAL 304
Query: 306 NEWTYNYDTCTYLLL 320
N Y LL
Sbjct: 305 RSDENNEVKEAYNLL 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 396 NLLRSAIVLCSAPS--------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 447
N L+++ C +P+ K Y G E DVWS G++LY +L G LPFD + I L+
Sbjct: 162 NFLKTS---CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
Query: 448 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED--NPLRE 502
K+ + Y P ++SP ++ ++R M+ +P +RI IQ++ W + D P+ E
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEE 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS--HFMP 372
GK Y G E DVWS G++LY +L G LPFD + I L+ K+ S + MP
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 196/317 (61%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA+KI+ K L L ++ E+ +K ++H +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V + EKE+RA FRQI+SAV Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L T CGSP YAAPE+ +GK+Y G
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ L + P
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNP 245
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ ++ W+ +G ED+ V PD+ KD ++M + +++
Sbjct: 246 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDY----KDPRRTELMVSM-GYTREEIQD 300
Query: 304 QLNEWTYNYDTCTYLLL 320
L YN TYLLL
Sbjct: 301 SLVGQRYNEVMATYLLL 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE--------KDDD 506
P +MS + +++ L + P KR ++ ++ W+ +G ED+ L+ KD
Sbjct: 224 RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 283
Query: 507 VIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
++M + +++ L YN TYLLL
Sbjct: 284 RTELMVSM-GYTREEIQDSLVGQRYNEVMATYLLL 317
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 237
Query: 379 SQYFPTILLPCKVGQVINLLR 399
++ IL P K G + +++
Sbjct: 238 KKFL--ILNPSKRGTLEQIMK 256
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 198/316 (62%), Gaps = 10/316 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQH 67
Y L++T+G G FAKVKLA HVLTG +VA+KI+ K L L ++ E+ +K ++H +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V+EY GGE+ D++V R+ EKE+RA FRQI+SAV Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG E + ++L T CGSP YAAPE+ +GK+Y G
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P +MS + +++ +L + P
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNP 253
Query: 248 GKRIKIQDLLGHNWVKMGPEDNPVS--FRPDHELRE-KDDDVIKVMADHKQLSPDDMWSQ 304
KR ++ ++ W+ +G E+ + PD + + K D++ M + D++
Sbjct: 254 IKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMVTMG----FARDEINDA 309
Query: 305 LNEWTYNYDTCTYLLL 320
L Y+ TY+LL
Sbjct: 310 LINQKYDEVMATYILL 325
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C +P K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLR---EKDDDV---- 507
P +MS + +++ +L + P KR ++ ++ W+ +G E+ L+ E D D
Sbjct: 232 RIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTK 291
Query: 508 -IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
I +M + D++ L Y+ TY+LL
Sbjct: 292 RIDIMVTMG-FARDEINDALINQKYDEVMATYILL 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 190/317 (59%), Gaps = 12/317 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQH 67
Y L +T+G G FAKVKLA H+LTG++VA+KI+ K L L ++ E+ K ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I KLF+VIET +++V EY GGE+ D++V R EKE+RA FRQI+SAV Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK EN+LLD + N+K+ DFG + G ++L CG+P YAAPE+ +GK+Y G
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY P + S + +++ L + P
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILNP 252
Query: 248 GKRIKIQDLLGHNWVKMGPEDNP----VSFRPDHELREKDDDVIKVMADHKQLSPDDMWS 303
KR ++ + W +G ED+ V PD++ + + + +++ D +
Sbjct: 253 SKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPRRTELXVSXGYTREEIQ-DSLVG 311
Query: 304 QLNEWTYNYDTCTYLLL 320
Q YN TYLLL
Sbjct: 312 Q----RYNEVXATYLLL 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 403 VLCSAP--------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY 454
C AP K+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L GKY
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 455 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN-------PLREKDDDV 507
P + S + +++ L + P KR ++ + W +G ED+ PL + D
Sbjct: 231 RIPFYXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPR 290
Query: 508 IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLL 541
+ + +++ L YN TYLLL
Sbjct: 291 RTELXVSXGYTREEIQDSLVGQRYNEVXATYLLL 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 326 QGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL--SHFMPI-----CTILI 378
QGK+Y G E DVWS+GV+LY L+ G LPFD ++ +L +++L + +P C L+
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLL 244
Query: 379 SQYFPTILLPCKVGQV 394
++ IL P K G +
Sbjct: 245 KKFL--ILNPSKRGTL 258
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 156/273 (57%), Gaps = 12/273 (4%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+ Y LE T+G G + +VK+A T + A K + K + ED+ R K EI +K +
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLD 64
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L++ E ++ I++V+E C GGEL + +V ++ E ++ + +LSAVAY H
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
L AHRDLKPEN L + LKLIDFGL A+ + G ++T G+P Y +P+V++G
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPYYVSPQVLEG 182
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WM--SPNSRQ 237
YG E D WS GVM+Y LLCG+ PF + + ++ KI G +T P W+ SP +
Sbjct: 183 --LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAES 240
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 270
++R +L P +RI L H W + +P
Sbjct: 241 LIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WM--SPNSRQIVR 469
YG E D WS GVM+Y LLCG+ PF + + ++ KI G +T P W+ SP + ++R
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 470 SMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 499
+L P +RI L H W + +P
Sbjct: 244 RLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
YG E D WS GVM+Y LLCG+ PF + + ++ KI
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 156/273 (57%), Gaps = 12/273 (4%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+ Y LE T+G G + +VK+A T + A K + K + ED+ R K EI +K +
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLD 81
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L++ E ++ I++V+E C GGEL + +V ++ E ++ + +LSAVAY H
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
L AHRDLKPEN L + LKLIDFGL A+ + G ++T G+P Y +P+V++G
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPYYVSPQVLEG 199
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WM--SPNSRQ 237
YG E D WS GVM+Y LLCG+ PF + + ++ KI G +T P W+ SP +
Sbjct: 200 --LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAES 257
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 270
++R +L P +RI L H W + +P
Sbjct: 258 LIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WM--SPNSRQIVR 469
YG E D WS GVM+Y LLCG+ PF + + ++ KI G +T P W+ SP + ++R
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 470 SMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 499
+L P +RI L H W + +P
Sbjct: 261 RLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
YG E D WS GVM+Y LLCG+ PF + + ++ KI
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 156/269 (57%), Gaps = 12/269 (4%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINAL 60
M+ ++R +I +GSG F++V L LTG+ A+K +KK+ D ++ EI L
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD-SSLENEIAVL 60
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
K I H++I L + E+++H ++V++ GGEL D I+ER EK++ +Q+LSAV
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 121 YLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
YLH G HRDLKPEN+L + N + + DFGL + G+ + T+CG+P Y APE
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYVAPE 177
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEPPW--MSP 233
V+ K Y D WS+GV+ Y LLCG+ PF ++ +L++KI G Y P W +S
Sbjct: 178 VLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE 236
Query: 234 NSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+++ + +L+ +P +R + L H W+
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWI 265
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEPPW--MSPNSRQIVR 469
Y D WS+GV+ Y LLCG+ PF ++ +L++KI G Y P W +S +++ +
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC 243
Query: 470 SMLQVEPGKRIKIQDLLGHNWV 491
+L+ +P +R + L H W+
Sbjct: 244 HLLEKDPNERYTCEKALSHPWI 265
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
Y D WS+GV+ Y LLCG+ PF ++ +L++KI
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 156/265 (58%), Gaps = 10/265 (3%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D++ + + T+G+G F++V LA TG+ A+K + K L ++ EI L+ I
Sbjct: 19 DIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK 78
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H++I L + E+ +H+++V++ GGEL D IVE+ EK++ RQ+L AV YLH
Sbjct: 79 HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
+G HRDLKPEN+L D + + DFGL +K EG + + T+CG+P Y APEV+
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGL-SKMEGKGDV-MSTACGTPGYVAPEVLAQ 196
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 197 KP-YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD 255
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+R++++ +P KR + H W+
Sbjct: 256 FIRNLMEKDPNKRYTCEQAARHPWI 280
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQIVR 469
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++ +R
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 470 SMLQVEPGKRIKIQDLLGHNWV 491
++++ +P KR + H W+
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWI 280
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 158/266 (59%), Gaps = 13/266 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHI 63
L ++Y + +GSG + +V L LTG + AIKI+KK+++ L E+ LK +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
H +I KL++ E + ++V+E GGEL D I+ RQ+ E ++ +Q+LS YLH
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 124 HLGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
HRDLKPEN+LL+ R+ +K++DFGL A E G +++ G+ Y APEV++
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKERLGTAYYIAPEVLR 179
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP-W--MSPNSR 236
K Y + DVWS GV+LY LLCG+ PF + ++ ++ GK++ +PP W +S ++
Sbjct: 180 KK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWV 262
Q+V+ ML EP KRI ++ L H W+
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWI 263
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP-W--MSPNSRQ 466
++ Y + DVWS GV+LY LLCG+ PF + ++ ++ GK++ +PP W +S ++Q
Sbjct: 179 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 238
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
+V+ ML EP KRI ++ L H W+
Sbjct: 239 LVKLMLTYEPSKRISAEEALNHPWI 263
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
++ Y + DVWS GV+LY LLCG+ PF + ++ ++
Sbjct: 179 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 158/266 (59%), Gaps = 13/266 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHI 63
L ++Y + +GSG + +V L LTG + AIKI+KK+++ L E+ LK +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
H +I KL++ E + ++V+E GGEL D I+ RQ+ E ++ +Q+LS YLH
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 124 HLGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
HRDLKPEN+LL+ R+ +K++DFGL A E G +++ G+ Y APEV++
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKERLGTAYYIAPEVLR 196
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP-W--MSPNSR 236
K Y + DVWS GV+LY LLCG+ PF + ++ ++ GK++ +PP W +S ++
Sbjct: 197 KK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWV 262
Q+V+ ML EP KRI ++ L H W+
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWI 280
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP-W--MSPNSRQ 466
++ Y + DVWS GV+LY LLCG+ PF + ++ ++ GK++ +PP W +S ++Q
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 255
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
+V+ ML EP KRI ++ L H W+
Sbjct: 256 LVKLMLTYEPSKRISAEEALNHPWI 280
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
++ Y + DVWS GV+LY LLCG+ PF + ++ ++
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+R+ Y +G+G F++V LA T + VAIK + K L ++ EI L I
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I L + E+ H++++++ GGEL D IVE+ E+++ Q+L AV YLH
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 125 LGYAHRDLKPENVL---LDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
LG HRDLKPEN+L LD + + + DFGL + G S L T+CG+P Y APEV+
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQ 192
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 193 KP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+R +++ +P KR + L H W+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSR 465
+++ Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
+R +++ +P KR + L H W+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+R+ Y +G+G F++V LA T + VAIK + K L ++ EI L I
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I L + E+ H++++++ GGEL D IVE+ E+++ Q+L AV YLH
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 125 LGYAHRDLKPENVL---LDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
LG HRDLKPEN+L LD + + + DFGL + G S L T+CG+P Y APEV+
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQ 192
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 193 KP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+R +++ +P KR + L H W+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQIVR 469
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++ +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 470 SMLQVEPGKRIKIQDLLGHNWV 491
+++ +P KR + L H W+
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+R+ Y +G+G F++V LA T + VAIK + K L ++ EI L I
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I L + E+ H++++++ GGEL D IVE+ E+++ Q+L AV YLH
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 125 LGYAHRDLKPENVL---LDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
LG HRDLKPEN+L LD + + + DFGL + G S L T+CG+P Y APEV+
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQ 192
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 193 KP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+R +++ +P KR + L H W+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQIVR 469
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++ +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 470 SMLQVEPGKRIKIQDLLGHNWV 491
+++ +P KR + L H W+
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
D+R+ Y +G+G F++V LA T + VAIK + K L ++ EI L I
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I L + E+ H++++++ GGEL D IVE+ E+++ Q+L AV YLH
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 125 LGYAHRDLKPENVL---LDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
LG HRDLKPEN+L LD + + + DFGL + G S L T+CG+P Y APEV+
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQ 192
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 193 KP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+R +++ +P KR + L H W+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSR 465
+++ Y D WS+GV+ Y LLCG+ PF ++ +L+++IL +Y P W +S +++
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
+R +++ +P KR + L H W+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y D WS+GV+ Y LLCG+ PF ++ +L+++IL
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
++Y +R +G G F +V L +TG++ A+K++ K + + + L E+ LK + H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I KL++ E + ++V E GGEL D I+ R+R E ++ RQ+LS + Y+H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 126 GYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
HRDLKPEN+LL+ ++ N+++IDFGL E +++ G+ Y APEV+ G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHGT 203
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQI 238
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ +
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWVK 263
+R ML P RI +D L H W++
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQ 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ ++R
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI +D L H W++
Sbjct: 264 KMLTYVPSMRISARDALDHEWIQ 286
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD 355
Y + DVWS GV+LY LL G PF+
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
++Y +R +G G F +V L +TG++ A+K++ K + + + L E+ LK + H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I KL++ E + ++V E GGEL D I+ R+R E ++ RQ+LS + Y+H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 126 GYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
HRDLKPEN+LL+ ++ N+++IDFGL E +++ G+ Y APEV+ G
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHGT 209
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQI 238
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ +
Sbjct: 210 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 267
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWVK 263
+R ML P RI +D L H W++
Sbjct: 268 IRKMLTYVPSMRISARDALDHEWIQ 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ ++R
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI +D L H W++
Sbjct: 270 KMLTYVPSMRISARDALDHEWIQ 292
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD 355
Y + DVWS GV+LY LL G PF+
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
++Y +R +G G F +V L +TG++ A+K++ K + + + L E+ LK + H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I KL++ E + ++V E GGEL D I+ R+R E ++ RQ+LS + Y+H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 126 GYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
HRDLKPEN+LL+ ++ N+++IDFGL E +++ G+ Y APEV+ G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHGT 226
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQI 238
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ +
Sbjct: 227 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 284
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWVK 263
+R ML P RI +D L H W++
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQ 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ ++R
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 286
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI +D L H W++
Sbjct: 287 KMLTYVPSMRISARDALDHEWIQ 309
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD 355
Y + DVWS GV+LY LL G PF+
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
++Y +R +G G F +V L +TG++ A+K++ K + + + L E+ LK + H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I KL++ E + ++V E GGEL D I+ R+R E ++ RQ+LS + Y+H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 126 GYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
HRDLKPEN+LL+ ++ N+++IDFGL E +++ G+ Y APEV+ G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHGT 227
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQI 238
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ +
Sbjct: 228 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 285
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWVK 263
+R ML P RI +D L H W++
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQ 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ ++R
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 287
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI +D L H W++
Sbjct: 288 KMLTYVPSMRISARDALDHEWIQ 310
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD 355
Y + DVWS GV+LY LL G PF+
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 153/265 (57%), Gaps = 14/265 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L + + +E +G G + V T + A+K++KK D V+ EI L +SH
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSH 107
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I KL ++ ET + I +V+E GGEL D IVE+ E+++ +QIL AVAYLH
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 126 GYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
G HRDLKPEN+L + LK+ DFGL E + ++T CG+P Y APE+++G
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEILRGC 225
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILNGKY--TEPPW--MSPNSRQ 237
YG E D+WS+G++ Y LLCGF PF + DQ ++ +ILN +Y P W +S N++
Sbjct: 226 A-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD 284
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
+VR ++ ++P KR+ L H WV
Sbjct: 285 LVRKLIVLDPKKRLTTFQALQHPWV 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILNGKY--TEPPW--MSPNSRQIV 468
YG E D+WS+G++ Y LLCGF PF + DQ ++ +ILN +Y P W +S N++ +V
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286
Query: 469 RSMLQVEPGKRIKIQDLLGHNWV 491
R ++ ++P KR+ L H WV
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWV 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILS 368
YG E D+WS+G++ Y LLCGF PF + DQ ++ +IL+
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 147/268 (54%), Gaps = 13/268 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHI 63
++Y +R +G G F +V L +TG++ A+K++ K + + + L E+ LK +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
H +I KL++ E + ++V E GGEL D I+ R+R E ++ RQ+LS + Y H
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 124 HLGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
HRDLKPEN+LL+ ++ N+++IDFGL E + + G+ Y APEV+
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKXKDKIGTAYYIAPEVLH 201
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSR 236
G Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++
Sbjct: 202 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 259
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM 264
++R L P RI +D L H W++
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEWIQT 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF+ + + K+ GKYT P W +S +++ ++R
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 470 SMLQVEPGKRIKIQDLLGHNWVKM 493
L P RI +D L H W++
Sbjct: 264 KXLTYVPSXRISARDALDHEWIQT 287
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD 355
Y + DVWS GV+LY LL G PF+
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHISHQ 66
++Y L + +G+G F +L E VA+K +++ GE + VK EI + + H
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIER---GEKIDENVKREIINHRSLRHP 75
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +V+EY GGEL + I R E E+R FF+Q++S V+Y H +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
AHRDLK EN LLD + LK+ DFG L SQ +++ G+P Y APEV+ K+Y
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQI 238
G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP R +
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P KRI I ++ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEW 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNS 464
K+Y G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 465 RQIVRSMLQVEPGKRIKIQDLLGHNW 490
R ++ + +P KRI I ++ H W
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEW 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------------HFMPIC 374
K+Y G DVWS GV LY +L G PF+ + + K + H P C
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 251 RHLISRIF 258
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP-RVKLEINALKHISHQ 66
++Y L + +GSG F +L + E VA+K +++ GE + VK EI + + H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIAANVKREIINHRSLRHP 75
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +V+EY GGEL + I R E E+R FF+Q++S V+Y H +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK EN LLD + LK+ DFG L SQ +++ G+P Y APEV+ K+Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQI 238
G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP R +
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P KRI I ++ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEW 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILS-----HFMPIC--------TILISQYFPT 384
++ G L+ +C F D + +++S H M +C T+L P
Sbjct: 96 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 385 ILLPCKVGQVINLLRSAIVLCSAPSS---------------KQYYGSETDVWSMGVMLYA 429
+ + C G + VL S P S K+Y G DVWS GV LY
Sbjct: 156 LKI-CDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 430 LLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQIVRSMLQVEPGKRIKIQ 483
+L G PF+ + + +ILN +Y P + +SP R ++ + +P KRI I
Sbjct: 210 MLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP 269
Query: 484 DLLGHNW 490
++ H W
Sbjct: 270 EIRNHEW 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------------HFMPIC 374
K+Y G DVWS GV LY +L G PF+ + + K + H P C
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 251 RHLISRIF 258
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHISHQ 66
++Y L + +GSG F +L + E VA+K +++ GE + VK EI + + H
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIDENVKREIINHRSLRHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +V+EY GGEL + I R E E+R FF+Q++S V+Y H +
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK EN LLD + LK+ DFG L SQ +++ G+P Y APEV+ K+Y
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQI 238
G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP R +
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 252
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P KRI I ++ H W
Sbjct: 253 ISRIFVADPAKRISIPEIRNHEW 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILS-----HFMPIC--------TILISQYFPT 384
++ G L+ +C F D + +++S H M +C T+L P
Sbjct: 95 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 154
Query: 385 ILLPCKVGQVINLLRSAIVLCSAPSS---------------KQYYGSETDVWSMGVMLYA 429
+ + C G + VL S P S K+Y G DVWS GV LY
Sbjct: 155 LKI-CDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 208
Query: 430 LLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQIVRSMLQVEPGKRIKIQ 483
+L G PF+ + + +ILN +Y P + +SP R ++ + +P KRI I
Sbjct: 209 MLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP 268
Query: 484 DLLGHNW 490
++ H W
Sbjct: 269 EIRNHEW 275
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------------HFMPIC 374
K+Y G DVWS GV LY +L G PF+ + + K + H P C
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 249
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 250 RHLISRIF 257
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 150/266 (56%), Gaps = 12/266 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHIS 64
L Y + +GSG + +V L +T + AIKI++K ++ ++ E+ LK +
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I KL+ E + ++V+E GGEL D I+ R + E ++ +Q+LS V YLH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 125 LGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
HRDLKPEN+LL+ + +K++DFGL A E + +++ G+ Y APEV++
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN--QKKMKERLGTAYYIAPEVLRK 212
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y + DVWS+GV+L+ LL G+ PF + ++ K+ GKYT P W +S ++
Sbjct: 213 K--YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+++ MLQ + +RI Q L H W+K
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIK 296
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
++ Y + DVWS+GV+L+ LL G+ PF + ++ K+ GKYT P W +S ++
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVK 492
+++ MLQ + +RI Q L H W+K
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIK 296
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
++ Y + DVWS+GV+L+ LL G+ PF + ++ K+
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 144/250 (57%), Gaps = 5/250 (2%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKLFQ 73
+G G FA V A + TG +VAIK++ K + + + RV+ E+ + H I +L+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDL 132
E S+++++V+E C GE+ ++ R + E E+R F QI++ + YLH G HRDL
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDL 138
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
N+LL RN N+K+ DFGL + + E T CG+PNY +PE I + +G E+DVW
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-TLCGTPNYISPE-IATRSAHGLESDVW 196
Query: 193 SMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIK 252
S+G M Y LL G PFD+D++ +K++ Y P ++S ++ ++ +L+ P R+
Sbjct: 197 SLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLS 256
Query: 253 IQDLLGHNWV 262
+ +L H ++
Sbjct: 257 LSSVLDHPFM 266
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 403 VLCSAP-------SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
LC P +++ +G E+DVWS+G M Y LL G PFD+D++ +K++ Y
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDD 505
P ++S ++ ++ +L+ P R+ + +L H ++ ++ + KD+
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS---RNSSTKSKDE 277
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 311 NYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+Y C +S + + +G E+DVWS+G M Y LL G PFD+D++ +K++
Sbjct: 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHISHQ 66
++Y L + +GSG F +L + E VA+K +++ GE + VK EI + + H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIDENVKREIINHRSLRHP 75
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +V+EY GGEL + I R E E+R FF+Q++S V+Y H +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK EN LLD + LK+ FG L SQ +++ G+P Y APEV+ K+Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQI 238
G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP R +
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P KRI I ++ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEW 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILS-----HFMPIC--------TILISQYFPT 384
++ G L+ +C F D + +++S H M +C T+L P
Sbjct: 96 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 385 ILLPCKVGQVINLLRSAIVLCSAPSS---------------KQYYGSETDVWSMGVMLYA 429
+ + C G + VL S P S K+Y G DVWS GV LY
Sbjct: 156 LKI-CAFG-----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 430 LLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQIVRSMLQVEPGKRIKIQ 483
+L G PF+ + + +ILN +Y P + +SP R ++ + +P KRI I
Sbjct: 210 MLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP 269
Query: 484 DLLGHNW 490
++ H W
Sbjct: 270 EIRNHEW 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------------HFMPIC 374
K+Y G DVWS GV LY +L G PF+ + + K + H P C
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 251 RHLISRIF 258
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 144/263 (54%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHISHQ 66
++Y L + +GSG F +L + E VA+K +++ GE + VK EI + + H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIDENVKREIINHRSLRHP 75
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +V+EY GGEL + I R E E+R FF+Q++S V+Y H +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK EN LLD + LK+ FG L SQ + + G+P Y APEV+ K+Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNSRQI 238
G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP R +
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P KRI I ++ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEW 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPW--MSPNS 464
K+Y G DVWS GV LY +L G PF+ + + +ILN +Y P + +SP
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 465 RQIVRSMLQVEPGKRIKIQDLLGHNW 490
R ++ + +P KRI I ++ H W
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEW 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------------HFMPIC 374
K+Y G DVWS GV LY +L G PF+ + + K + H P C
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 251 RHLISRIF 258
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 163/297 (54%), Gaps = 27/297 (9%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS----HQHIC 69
R +G G F KV LA TG+ A+K++KK + +D V+ + + +S H +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDVECTMTEKRILSLARNHPFLT 87
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
+LF +T +F V+E+ GG+L+ HI + +R E +R + +I+SA+ +LH G +
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGS 187
RDLK +NVLLD + KL DFG+C + G+ + + T+ CG+P+Y APE+++ + YG
Sbjct: 148 RDLKLDNVLLDHEGHCKLADFGMCKE---GICNGVTTATFCGTPDYIAPEILQ-EMLYGP 203
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 247
D W+MGV+LY +LCG PF++++ D L++ ILN + P W+ ++ I++S + P
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNP 263
Query: 248 GKRIKI------QDLLGH------NWVKMGPEDNPVSFRPDHELREK----DDDVIK 288
R+ +L H +W ++ FRP + RE D D IK
Sbjct: 264 TMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIK 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 389 CKVGQVINLLRSAIVLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 441
CK G + N + +A C P + YG D W+MGV+LY +LCG PF++++
Sbjct: 171 CKEG-ICNGVTTA-TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
Query: 442 IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 480
D L++ ILN + P W+ ++ I++S + P R+
Sbjct: 229 EDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
YG D W+MGV+LY +LCG PF++++ D L++ IL+
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAIKI+ K R V+ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 291
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 370 FMP 372
F+P
Sbjct: 239 FIP 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 146/264 (55%), Gaps = 12/264 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V +T ++ A+K++ KA+ +D + E+ LK + H +I KLF++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
+E SS ++V E GGEL D I++R+R E ++ +Q+ S + Y+H HRDLKP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 135 ENVLLDRNQ---NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
EN+LL+ + ++K+IDFGL + ++++ G+ Y APEV++G Y + DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVRSMLQVEP 247
WS GV+LY LL G PF + + ++ GKY P W +S +++ ++R ML P
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHP 265
Query: 248 GKRIKIQDLLGHNWVKMGPEDNPV 271
RI L H W++ + P
Sbjct: 266 SLRITATQCLEHPWIQKYSSETPT 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF + + ++ GKY P W +S +++ ++R
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 470 SMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 499
ML P RI L H W++ + P
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSETP 288
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
Y + DVWS GV+LY LL G PF
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAIKI+ K R V+ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 291
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 370 FMP 372
F+P
Sbjct: 239 FIP 241
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAIKI+ K R V+ EI
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 67 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 183
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 195 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 254
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 255 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 290
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 370 FMP 372
F+P
Sbjct: 238 FIP 240
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAI+I+ K R V+ EI
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 207 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 265
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 323
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 384 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 335 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 394
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 395 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 430
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 370 FMP 372
F+P
Sbjct: 378 FIP 380
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAIKI+ K R V+ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 291
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 370 FMP 372
F+P
Sbjct: 239 FIP 241
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAIKI+ K R V+ EI
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 74 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLA 190
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 251 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 202 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 261
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 262 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 297
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 370 FMP 372
F+P
Sbjct: 245 FIP 247
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPR-------VKLEIN 58
LR++YI+ +T+GSG +VKLA T +KVAI+I+ K R V+ EI
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
LK ++H I K+ + + ++V+E GGEL D +V +RL E + +F Q+L A
Sbjct: 193 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V YLH G HRDLKPENVLL + +K+ DFG G S ++T CG+P Y A
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTPTYLA 309
Query: 176 PEVI--KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W 230
PEV+ G Y D WS+GV+L+ L G+ PF L D+I +GKY P W
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 231 --MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S + +V+ +L V+P R ++ L H W++
Sbjct: 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPP--W--MSPNSRQIV 468
Y D WS+GV+L+ L G+ PF L D+I +GKY P W +S + +V
Sbjct: 321 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 380
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVI 508
+ +L V+P R ++ L H W+ +D ++ K D++
Sbjct: 381 KKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLL 416
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILS---H 369
T TYL G Y D WS+GV+L+ L G+ PF L D+I S +
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 370 FMP 372
F+P
Sbjct: 364 FIP 366
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 150/262 (57%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 85
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + T CG+P Y APE+I K
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKG- 200
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 260
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 261 VDLTKRFGNLKDGVNDIKNHKW 282
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 260
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 261 VDLTKRFGNLKDGVNDIKNHKW 282
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 145/263 (55%), Gaps = 14/263 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDLPRVKLEINALKHISHQ 66
++Y + +GSG F +L LT E VA+K I + A + E++ R EI + + H
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR---EIINHRSLRHP 76
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I + +VI T +H+ +++EY GGEL + I R E E+R FF+Q+LS V+Y H +
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 127 YAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK EN LLD + LK+ DFG L SQ +++ G+P Y APEV+ ++Y
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDK----ILNGKYTEPP--WMSPNSRQI 238
G DVWS GV LY +L G PF+ + Y K IL+ KY+ P +SP +
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254
Query: 239 VRSMLQVEPGKRIKIQDLLGHNW 261
+ + +P RI I ++ H+W
Sbjct: 255 ISRIFVADPATRISIPEIKTHSW 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILS-----HFMPIC--------TILISQYFPT 384
++ G LY +C F D + ++LS H M IC T+L P
Sbjct: 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR 156
Query: 385 ILLPCKVGQVINLLRSAIVLCSAPSS---------------KQYYGSETDVWSMGVMLYA 429
+ + C G + VL S P S ++Y G DVWS GV LY
Sbjct: 157 LKI-CDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYV 210
Query: 430 LLCGFLPFDSDSIDQLYDK----ILNGKYTEPP--WMSPNSRQIVRSMLQVEPGKRIKIQ 483
+L G PF+ + Y K IL+ KY+ P +SP ++ + +P RI I
Sbjct: 211 MLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIP 270
Query: 484 DLLGHNW 490
++ H+W
Sbjct: 271 EIKTHSW 277
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFM-------------PIC 374
++Y G DVWS GV LY +L G PF+ + Y K + + P C
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 375 TILISQYF 382
LIS+ F
Sbjct: 252 CHLISRIF 259
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 150/262 (57%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + T CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 144/256 (56%), Gaps = 12/256 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V +T ++ A+K++ KA+ +D + E+ LK + H +I KLF++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
+E SS ++V E GGEL D I++R+R E ++ +Q+ S + Y+H HRDLKP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 135 ENVLLDRNQ---NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
EN+LL+ + ++K+IDFGL + ++++ G+ Y APEV++G Y + DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVRSMLQVEP 247
WS GV+LY LL G PF + + ++ GKY P W +S +++ ++R ML P
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHP 265
Query: 248 GKRIKIQDLLGHNWVK 263
RI L H W++
Sbjct: 266 SLRITATQCLEHPWIQ 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF + + ++ GKY P W +S +++ ++R
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI L H W++
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQ 281
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
Y + DVWS GV+LY LL G PF
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPAFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 144/256 (56%), Gaps = 12/256 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V +T ++ A+K++ KA+ +D + E+ LK + H +I KLF++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
+E SS ++V E GGEL D I++R+R E ++ +Q+ S + Y+H HRDLKP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 135 ENVLLDRNQ---NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
EN+LL+ + ++K+IDFGL + ++++ G+ Y APEV++G Y + DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVRSMLQVEP 247
WS GV+LY LL G PF + + ++ GKY P W +S +++ ++R ML P
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHP 265
Query: 248 GKRIKIQDLLGHNWVK 263
RI L H W++
Sbjct: 266 SLRITATQCLEHPWIQ 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR 469
Y + DVWS GV+LY LL G PF + + ++ GKY P W +S +++ ++R
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 470 SMLQVEPGKRIKIQDLLGHNWVK 492
ML P RI L H W++
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQ 281
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
Y + DVWS GV+LY LL G PF
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 194
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 254
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 255 LVKDPKKRMTIQDSLQHPWIK--PKDT 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIK--PKDT 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDT 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 194
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 254
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 255 LVKDPKKRMTIQDSLQHPWIK--PKDT 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIK--PKDT 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDT 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 147/261 (56%), Gaps = 12/261 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISH 65
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + ++ E L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
+RDLKPEN+++D+ +K+ DFGL + +G + CG+P Y APE+I K Y
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKG-Y 215
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQV
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 246 EPGKRI-----KIQDLLGHNW 261
+ KR + D+ H W
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 16/261 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVK 263
L +P KR+ IQD L H W+K
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVK 492
+L +P KR+ IQD L H W+K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 16/261 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVK 263
L +P KR+ IQD L H W+K
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVK 492
+L +P KR+ IQD L H W+K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 148/266 (55%), Gaps = 18/266 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + +++E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPED 268
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKD 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPED 497
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKD 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGG++ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 147/261 (56%), Gaps = 12/261 (4%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISH 65
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + ++ E L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
+RDLKPEN+++D+ +++ DFGL + +G + CG+P Y APE+I K Y
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKG-Y 215
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQV
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 246 EPGKRI-----KIQDLLGHNW 261
+ KR + D+ H W
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGG++ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK---HIS 64
+Q+ RT+G+G F +V L H TG A+KI+ K + + L +++ +N + ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRIQQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +K+ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 92
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 207
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKW 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKW 289
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIXNHKW 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIXNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 143/265 (53%), Gaps = 10/265 (3%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ ++Y L +G G F+ V+ + TG + A KI+ L D +++ E + +
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I ++V + GGEL + IV R+ E ++ +QIL AV + H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 125 LGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
+G HRDLKPEN+LL + +KL DFGL + +G ++ + G+P Y +PEV++
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLR- 179
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K+ YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 239
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ ML + P KRI + L H WV
Sbjct: 240 LINQMLTINPAKRITAHEALKHPWV 264
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K+ YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI + L H WV
Sbjct: 240 LINQMLTINPAKRITAHEALKHPWV 264
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K+ YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 147/267 (55%), Gaps = 18/267 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHISHQHICK 70
+GSG FA VK TG + A K +KK + G ++ E++ LK I H ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +V E + + ++ E GGEL D + E++ L E+E+ F +QIL+ V YLH L AH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 131 DLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
DLKPEN+ LLDRN +K+IDFGL K + G ++ + G+P + APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRSM 242
E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDN 269
L +P KR+ IQD L H W+K P+D
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + + Y E + S S + +R
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
+L +P KR+ IQD L H W+K P+D
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK--PKDT 280
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 92
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 207
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKW 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKW 289
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 65
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 244
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 245 VENPSARITIPDIKKDRW 262
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 238
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 239 LLHKILVENPSARITIPDIKKDRW 262
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 143/265 (53%), Gaps = 10/265 (3%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
++ Y L +G G F+ V+ VL G++ A KI+ L D +++ E + +
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I H +++ + GGEL + IV R+ E ++ +QIL AV + H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 125 LGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
+G HRDLKPEN+LL + +KL DFGL + EG ++ + G+P Y +PEV++
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLR- 197
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ ML + P KRI + L H W+
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWI 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI + L H W+
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWI 282
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 120
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY PGGE+ H+ R E +R + QI+ YLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 235
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 149/272 (54%), Gaps = 16/272 (5%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-----GEDLPRVKLEINA 59
D+ + Y + +GSG FA V+ TG++ A K +KK L G ++ E+N
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
L+ I H +I L + E + + +++E GGEL D + E++ L E E+ F +QIL V
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 120 AYLHHLGYAHRDLKPENV-LLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
YLH AH DLKPEN+ LLD+ N +KLIDFG+ K E G ++ + G+P + A
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTPEFVA 186
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSP 233
PE++ + G E D+WS+GV+ Y LL G PF ++ + I +N + E + +
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 234 N--SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ ++ +R +L +P +R+ I L H+W+K
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSP 462
AP Y G E D+WS+GV+ Y LL G PF ++ + I +N + E + +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 463 N--SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ ++ +R +L +P +R+ I L H+W+K
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 332 GSETDVWSMGVMLYALLCGFLPF 354
G E D+WS+GV+ Y LL G PF
Sbjct: 196 GLEADMWSIGVITYILLSGASPF 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINAMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L CG+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H+ TG A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKAT-------LGEDLPRVKLEINALKHIS-HQ 66
+G G + V+ H TG + A+KIM+ L E + E + L+ ++ H
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
HI L E+SS +F+V + GEL D++ E+ L EKE+R+ R +L AV++LH
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ--- 183
HRDLKPEN+LLD N ++L DFG E G +L+ CG+P Y APE++K
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG--EKLRELCGTPGYLAPEILKCSMDET 278
Query: 184 --YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEPPW--MSPNSRQ 237
YG E D+W+ GV+L+ LL G PF + I+ G+Y + P W S +
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ +LQV+P R+ + L H + +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 398 LRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--T 455
L I+ CS + YG E D+W+ GV+L+ LL G PF + I+ G+Y +
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 456 EPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
P W S + ++ +LQV+P R+ + L H + +
Sbjct: 326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+W+ GV+L+ LL G PF
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPF 305
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 120
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G T CG+P Y APE+I K
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSKG- 235
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXINKMLNHENV 67
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L G+ Y APE++K ++++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 246
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 247 VENPSARITIPDIKKDRW 264
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRW 264
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 148/271 (54%), Gaps = 16/271 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-----GEDLPRVKLEINAL 60
+ + Y + +GSG FA V+ TG++ A K +KK L G ++ E+N L
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
+ I H +I L + E + + +++E GGEL D + E++ L E E+ F +QIL V
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 121 YLHHLGYAHRDLKPENV-LLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
YLH AH DLKPEN+ LLD+ N +KLIDFG+ K E G ++ + G+P + AP
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTPEFVAP 201
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSPN 234
E++ + G E D+WS+GV+ Y LL G PF ++ + I +N + E + + +
Sbjct: 202 EIVN-YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 260
Query: 235 --SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ +R +L +P +R+ I L H+W+K
Sbjct: 261 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSP 462
AP Y G E D+WS+GV+ Y LL G PF ++ + I +N + E + +
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 259
Query: 463 N--SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ ++ +R +L +P +R+ I L H+W+K
Sbjct: 260 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 332 GSETDVWSMGVMLYALLCGFLPF 354
G E D+WS+GV+ Y LL G PF
Sbjct: 210 GLEADMWSIGVITYILLSGASPF 232
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L G+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 148/271 (54%), Gaps = 16/271 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-----GEDLPRVKLEINAL 60
+ + Y + +GSG FA V+ TG++ A K +KK L G ++ E+N L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
+ I H +I L + E + + +++E GGEL D + E++ L E E+ F +QIL V
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 121 YLHHLGYAHRDLKPENV-LLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
YLH AH DLKPEN+ LLD+ N +KLIDFG+ K E G ++ + G+P + AP
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTPEFVAP 180
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSPN 234
E++ + G E D+WS+GV+ Y LL G PF ++ + I +N + E + + +
Sbjct: 181 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 235 --SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ +R +L +P +R+ I L H+W+K
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSP 462
AP Y G E D+WS+GV+ Y LL G PF ++ + I +N + E + +
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 463 N--SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ ++ +R +L +P +R+ I L H+W+K
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 332 GSETDVWSMGVMLYALLCGFLPF 354
G E D+WS+GV+ Y LL G PF
Sbjct: 189 GLEADMWSIGVITYILLSGASPF 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 145/273 (53%), Gaps = 23/273 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-----GEDLPRVKL-------EI 57
Y R +GSG + +V L + AIK++KK+ +D ++ EI
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 58 NALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILS 117
+ LK + H +I KLF V E + ++V E+ GGEL + I+ R + E ++ +QILS
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS 157
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQ---NLKLIDFGLCAKPEGGLESQLQTSCGSPNYA 174
+ YLH HRD+KPEN+LL+ N+K++DFGL + + +L+ G+ Y
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRDRLGTAYYI 215
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY----TEPPW 230
APEV+K K Y + DVWS GV++Y LLCG+ PF + + K+ GKY +
Sbjct: 216 APEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S ++++++ ML + KR ++ L W+K
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY----TEPPWMSPNSRQ 466
K+ Y + DVWS GV++Y LLCG+ PF + + K+ GKY + +S +++
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVK 492
+++ ML + KR ++ L W+K
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIK 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPF 354
K+ Y + DVWS GV++Y LLCG+ PF
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L G+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQH 67
+Y L +G G F+ V+ VL G++ A I+ L D +++ E + + H +
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
I +L I H +++ + GGEL + IV R+ E ++ +QIL AV + H +G
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 128 AHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HR+LKPEN+LL + +KL DFGL + EG ++ + G+P Y +PEV++ K
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLR-KDP 189
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQIVR 240
YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++ ++
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 241 SMLQVEPGKRIKIQDLLGHNWV 262
ML + P KRI + L H W+
Sbjct: 250 KMLTINPSKRITAAEALKHPWI 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 246
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI + L H W+
Sbjct: 247 LINKMLTINPSKRITAAEALKHPWI 271
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L G+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 12/258 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI--MKKATLGEDLPR-VKLEINALKHISHQHI 68
L +T+G G + +V+LA + +T E VA+KI MK+A D P +K EI K ++H+++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENV 66
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
K + + ++ +EYC GGEL D I + E +++ FF Q+++ V YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KPEN+LLD NLK+ DFGL E L G+ Y APE++K ++++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 188 ETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--QIVRSML 243
DVWS G++L A+L G LP+D SDS + D Y PW +S ++ +L
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN-PWKKIDSAPLALLHKIL 245
Query: 244 QVEPGKRIKIQDLLGHNW 261
P RI I D+ W
Sbjct: 246 VENPSARITIPDIKKDRW 263
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSR--Q 466
++++ DVWS G++L A+L G LP+D SDS + D Y PW +S
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN-PWKKIDSAPLA 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNW 490
++ +L P RI I D+ W
Sbjct: 240 LLHKILVENPSARITIPDIKKDRW 263
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYD 364
++++ DVWS G++L A+L G LP+D SDS + D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSD 219
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 86
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D +++ DFG + +G + CG+P Y APE+I K
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 201
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 262 VDLTKRFGNLKNGVNDIKNHKW 283
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 262 VDLTKRFGNLKNGVNDIKNHKW 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 4/252 (1%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + +T CG+PNY APEV+ K+ + E DVWS
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVL-SKKGHSFEVDVWS 202
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 203 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 262
Query: 254 QDLLGHNWVKMG 265
+LL + G
Sbjct: 263 NELLNDEFFTSG 274
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
LC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 236 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 274
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILIS 379
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 249
Query: 380 QYFPT 384
+ T
Sbjct: 250 KMLQT 254
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 100
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKW 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLPNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLPNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 94
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 209
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 269
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 270 VDLTKRFGNLKNGVNDIKNHKW 291
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 269
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 270 VDLTKRFGNLKNGVNDIKNHKW 291
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 4/252 (1%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + +T CG+PNY APEV+ K+ + E DVWS
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVL-SKKGHSFEVDVWS 202
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 203 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 262
Query: 254 QDLLGHNWVKMG 265
+LL + G
Sbjct: 263 NELLNDEFFTSG 274
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
LC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 236 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 274
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILIS 379
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 249
Query: 380 QYFPT 384
+ T
Sbjct: 250 KMLQT 254
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 150/266 (56%), Gaps = 21/266 (7%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y+++ T+G G +++ K H T + A+K++ K+ P ++EI L++ H +I
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD---PSEEIEI-LLRYGQHPNII 84
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
L V + H+++V E GGELLD I+ ++ E+E+ I V YLH G H
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 130 RDLKPENVL-LDRNQN---LKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
RDLKP N+L +D + N L++ DFG + E GL L T C + N+ APEV+K +Q
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPCYTANFVAPEVLK-RQ 200
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILNGKYT--EPPW--MSPNSR 236
Y D+WS+G++LY +L G+ PF SD+ +++ +I +GK+T W +S ++
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWV 262
+V ML V+P +R+ + +L H WV
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILNGKYT--EPPW--MSPN 463
+Q Y D+WS+G++LY +L G+ PF SD+ +++ +I +GK+T W +S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
++ +V ML V+P +R+ + +L H WV
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILS 368
+Q Y D+WS+G++LY +L G+ PF SD+ +++ +I S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 4/252 (1%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + +T CG+PNY APEV+ K+ + E DVWS
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVL-SKKGHSFEVDVWS 206
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 207 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 266
Query: 254 QDLLGHNWVKMG 265
+LL + G
Sbjct: 267 NELLNDEFFTSG 278
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
LC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 239
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 240 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 278
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILIS 379
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 253
Query: 380 QYFPT 384
+ T
Sbjct: 254 KMLQT 258
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+++D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIIISKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 120
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 235
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKW 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 151/266 (56%), Gaps = 21/266 (7%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y+++ T+G G +++ K H T + A+K++ K+ + P ++EI L++ H +I
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI-LLRYGQHPNII 84
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
L V + H+++V E GGELLD I+ ++ E+E+ I V YLH G H
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 130 RDLKPENVL-LDRNQN---LKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
RDLKP N+L +D + N L++ DFG + E GL L T C + N+ APEV+K +Q
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPCYTANFVAPEVLK-RQ 200
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILNGKYT--EPPW--MSPNSR 236
Y D+WS+G++LY +L G+ PF SD+ +++ +I +GK+T W +S ++
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWV 262
+V ML V+P +R+ + +L H WV
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILNGKYT--EPPW--MSPN 463
+Q Y D+WS+G++LY +L G+ PF SD+ +++ +I +GK+T W +S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
++ +V ML V+P +R+ + +L H WV
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFD---SDSIDQLYDKILS 368
+Q Y D+WS+G++LY +L G+ PF SD+ +++ +I S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 18/273 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H ++ L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I + Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+R +L E KR+ IQ+ L H W+ P DN
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN 463
AP Y G E D+WS+GV+ Y LL G PF D+ + I + Y + + S
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 464 S---RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
S + +R +L E KR+ IQ+ L H W+ P DN
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
G E D+WS+GV+ Y LL G PF D+ + I S
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 18/273 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H ++ L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I + Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+R +L E KR+ IQ+ L H W+ P DN
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN 463
AP Y G E D+WS+GV+ Y LL G PF D+ + I + Y + + S
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 464 S---RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
S + +R +L E KR+ IQ+ L H W+ P DN
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
G E D+WS+GV+ Y LL G PF D+ + I S
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 18/273 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H ++ L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I + Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+R +L E KR+ IQ+ L H W+ P DN
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN 463
AP Y G E D+WS+GV+ Y LL G PF D+ + I + Y + + S
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 464 S---RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
S + +R +L E KR+ IQ+ L H W+ P DN
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
G E D+WS+GV+ Y LL G PF D+ + I S
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 18/273 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H ++ L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+R +L E KR+ IQ+ L H W+ P DN
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN 463
AP Y G E D+WS+GV+ Y LL G PF D+ + I Y + + S
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 464 S---RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
S + +R +L E KR+ IQ+ L H W+ P DN
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDT 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 18/273 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H ++ L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+R +L E KR+ IQ+ L H W+ P DN
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN 463
AP Y G E D+WS+GV+ Y LL G PF D+ + I Y + + S
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 464 S---RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 498
S + +R +L E KR+ IQ+ L H W+ P DN
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT--PVDN 281
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDT 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 4/252 (1%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + + CG+PNY APEV+ K+ + E DVWS
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVL-SKKGHSFEVDVWS 224
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 225 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 284
Query: 254 QDLLGHNWVKMG 265
+LL + G
Sbjct: 285 NELLNDEFFTSG 296
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
VLC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 257
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 258 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 296
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILIS 379
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 271
Query: 380 QYFPT 384
+ T
Sbjct: 272 KMLQT 276
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 4/252 (1%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + + CG+PNY APEV+ K+ + E DVWS
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVL-SKKGHSFEVDVWS 226
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 227 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 286
Query: 254 QDLLGHNWVKMG 265
+LL + G
Sbjct: 287 NELLNDEFFTSG 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
VLC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 259
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILISQ 380
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI +
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 274
Query: 381 YFPT 384
T
Sbjct: 275 MLQT 278
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 6/261 (2%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISHQHICKLFQ 73
+G GGFAK + T E A KI+ K+ L + R K+ EI+ + ++HQH+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
E + +F+V+E C LL+ R+ L E E+R + RQI+ YLH HRDLK
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
N+ L+ + +K+ DFGL K E E + + CG+PNY APEV+ K+ + E DVWS
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVL-SKKGHSFEVDVWS 200
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI 253
+G ++Y LL G PF++ + + Y +I +Y+ P ++P + +++ MLQ +P R I
Sbjct: 201 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 260
Query: 254 QDLLGHNWVKMG--PEDNPVS 272
+LL + G P P++
Sbjct: 261 NELLNDEFFTSGYIPARLPIT 281
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
VLC P+ SK+ + E DVWS+G ++Y LL G PF++ + + Y +I +Y+
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 233
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + +++ MLQ +P R I +LL + G
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-------SHFMPICTILIS 379
K+ + E DVWS+G ++Y LL G PF++ + + Y +I H P+ LI
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 247
Query: 380 QYFPT 384
+ T
Sbjct: 248 KMLQT 252
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y AP +I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPAIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 398 LRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP 457
L AI+L Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P
Sbjct: 205 LAPAIILSKG------YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 458 PWMSPNSRQIVRSMLQVEPGKRI-----KIQDLLGHNW 490
S + + ++R++LQV+ KR + D+ H W
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ K + D+ H W
Sbjct: 275 VDLTKAFGNLKNGVNDIKNHKW 296
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ K + D+ H W
Sbjct: 275 VDLTKAFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + G+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLAGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + CG+P APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEALAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 404 LCSAPSS-------KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE 456
LC P + + Y D W++GV++Y + G+ PF +D Q+Y+KI++GK
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 457 PPWMSPNSRQIVRSMLQVEPGKRI-----KIQDLLGHNW 490
P S + + ++R++LQV+ KR + D+ H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 142/265 (53%), Gaps = 10/265 (3%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ ++Y L +G G F+ V+ + TG++ A KI+ L D +++ E + +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I ++V + GGEL + IV R+ E ++ +QIL +V + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HRDLKPEN+LL + +KL DFGL + +G ++ + G+P Y +PEV++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLR- 179
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ ML + P KRI + L H W+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI + L H W+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 142/265 (53%), Gaps = 10/265 (3%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ ++Y L +G G F+ V+ + TG++ A KI+ L D +++ E + +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I ++V + GGEL + IV R+ E ++ +QIL +V + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HRDLKPEN+LL + +KL DFGL + +G ++ + G+P Y +PEV++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLR- 179
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ ML + P KRI + L H W+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI + L H W+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWI 264
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 150/274 (54%), Gaps = 20/274 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALK 61
+ Y L +G G F+ V+ + TG++ A+KI+ A G +K E +
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----EKESRAFFRQILS 117
+ H HI +L + + ++MV E+ G +L IV+R G E + + RQIL
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAK-PEGGLESQLQTSCGSPNY 173
A+ Y H HRD+KPENVLL +N +KL DFG+ + E GL + + G+P++
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV--GTPHF 199
Query: 174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W- 230
APEV+K ++ YG DVW GV+L+ LL G LPF + ++L++ I+ GKY P W
Sbjct: 200 MAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWS 257
Query: 231 -MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S +++ +VR ML ++P +RI + + L H W+K
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W--MSPNSRQ 466
++ YG DVW GV+L+ LL G LPF + ++L++ I+ GKY P W +S +++
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKD 265
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVK 492
+VR ML ++P +RI + + L H W+K
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWLK 291
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
++ YG DVW GV+L+ LL G LPF + ++L++ I+
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 245
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 146/262 (55%), Gaps = 14/262 (5%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA---LKHIS 64
+Q+ +T+G+G F +V L H +G A+KI+ K + + L +++ +N L+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVN 99
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ KL + +S+++MV+EY GGE+ H+ R E +R + QI+ YLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
L +RDLKPEN+L+D+ +++ DFG + +G + G+P Y APE+I K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXGTPEYLAPEIILSKG- 214
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 244
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 245 VEPGKRI-----KIQDLLGHNW 261
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
Y D W++GV++Y + G+ PF +D Q+Y+KI++GK P S + + ++R++LQ
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 474 VEPGKRI-----KIQDLLGHNW 490
V+ KR + D+ H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKW 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D W++GV++Y + G+ PF +D Q+Y+KI+S
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 144/266 (54%), Gaps = 16/266 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK-----ATLGEDLPRVKLEINALKHIS 64
Y + +GSG FA VK TG + A K +KK + G ++ E++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I L V E + + +++E GGEL D + +++ L E+E+ +F +QIL V YLH
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 125 LGYAHRDLKPENV-LLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
AH DLKPEN+ LLD+N ++KLIDFGL + E G+E + G+P + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIV- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---R 236
+ G E D+WS+GV+ Y LL G PF D+ + I Y + + S S +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWV 262
+R +L E KR+ IQ+ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS---RQIVRS 470
G E D+WS+GV+ Y LL G PF D+ + I Y + + S S + +R
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 471 MLQVEPGKRIKIQDLLGHNWV 491
+L E KR+ IQ+ L H W+
Sbjct: 256 LLVKETRKRLTIQEALRHPWI 276
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDS 358
G E D+WS+GV+ Y LL G PF D+
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDT 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 166/318 (52%), Gaps = 31/318 (9%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQ 66
+ L R +G G +AKV L T A+K++KK + ED+ V+ E + + S H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ L +T S +F VIEY GG+L+ H+ +++L E+ +R + +I A+ YLH G
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQY 184
+RDLK +NVLLD ++KL D+G+C + GL TS CG+PNY APE+++G+
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE---GLRPGDTTSXFCGTPNYIAPEILRGED- 197
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 235
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P MS +
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA 257
Query: 236 RQIVRSMLQVEPGKRI------KIQDLLGH------NWVKMGPEDNPVSFRPDHELREKD 283
+++S L +P +R+ D+ GH +W M + F+P+
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGL 317
Query: 284 DDVIKVMADHK-QLSPDD 300
D+ + + QL PDD
Sbjct: 318 DNFDSQFTNERVQLXPDD 335
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 464
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P MS +
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA 257
Query: 465 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 492
+++S L +P +R+ D+ GH + +
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ 361
YG D W++GV+++ ++ G PFD SD+ DQ
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
+Y+ R +G GGFAK T + T E A K++ K+ L + + K+ EI K + +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
H+ E +++V+E C LL+ R+ + E E+R F RQ + V YLH+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLK N+ L+ + ++K+ DFGL K E E + +T CG+PNY APEV+ K+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KTLCGTPNYIAPEVL-CKKGH 219
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
E D+WS+G +LY LL G PF++ + + Y +I +Y+ P ++P + ++R ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 246 EPGKRIKIQDLLGHNWVKMG 265
+P R + +LL + G
Sbjct: 280 DPTLRPSVAELLTDEFFTSG 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 403 VLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT 455
LC P+ K+ + E D+WS+G +LY LL G PF++ + + Y +I +Y+
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + ++R ML +P R + +LL + G
Sbjct: 261 VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------HFMPICTILISQ 380
K+ + E D+WS+G +LY LL G PF++ + + Y +I H P+ + LI +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ Y ++ +G G F+ V+ H TG + A KI+ L D +++ E + +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I+ S ++V + GGEL + IV R+ E ++ +QIL ++AY H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HR+LKPEN+LL + +KL DFGL E G+P Y +PEV+K
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK- 180
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ SML V P KRI L W+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ SML V P KRI L W+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 321 LSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
LS + K Y D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++T CG+P Y APEV++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 241 KKDPKQRL 248
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 242 KDPKQRL 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++T CG+P Y APEV++
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 185 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 243
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 244 KKDPKQRL 251
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 244
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 245 KDPKQRL 251
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++T CG+P Y APEV++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 241 KKDPKQRL 248
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 242 KDPKQRL 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+I +R +GSG F V L +G + IK + K + +++ EI LK + H +I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAF----FRQILSAVAYLHHL 125
K+F+V E ++++V+E C GGELL+ IV Q G+ S + +Q+++A+AY H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 126 GYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
H+DLKPEN+L + +K+IDFGL + S + G+ Y APEV K
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVFKRD 201
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPW------MSPNSR 236
+ + D+WS GV++Y LL G LPF S++++ K Y EP + ++P +
Sbjct: 202 VTF--KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK---ATYKEPNYAVECRPLTPQAV 256
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+++ ML +P +R +L H W K
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 419 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPW------MSPNSRQIVRSML 472
D+WS GV++Y LL G LPF S++++ K Y EP + ++P + +++ ML
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQK---ATYKEPNYAVECRPLTPQAVDLLKQML 263
Query: 473 QVEPGKRIKIQDLLGHNWVKMG 494
+P +R +L H W K
Sbjct: 264 TKDPERRPSAAQVLHHEWFKQA 285
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 336 DVWSMGVMLYALLCGFLPFDSDSIDQLYDK 365
D+WS GV++Y LL G LPF S++++ K
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 133/245 (54%), Gaps = 5/245 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINAL-KHISHQHICK 70
+ +G G F KV LA H A+K+++K + ++ + E N L K++ H +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +T+ ++ V++Y GGEL H+ + E +R + +I SA+ YLH L +R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETD 190
DLKPEN+LLD ++ L DFGLC K S T CG+P Y APEV+ KQ Y D
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLC-KENIEHNSTTSTFCGTPEYLAPEVLH-KQPYDRTVD 221
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
W +G +LY +L G PF S + ++YD ILN P ++ ++R ++ +LQ + KR
Sbjct: 222 WWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
Query: 251 IKIQD 255
+ +D
Sbjct: 282 LGAKD 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRS 470
KQ Y D W +G +LY +L G PF S + ++YD ILN P ++ ++R ++
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEG 272
Query: 471 MLQVEPGKRIKIQD 484
+LQ + KR+ +D
Sbjct: 273 LLQKDRTKRLGAKD 286
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
KQ Y D W +G +LY +L G PF S + ++YD IL+
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ Y ++ +G G F+ V+ H TG + A KI+ L D +++ E + +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I+ S ++V + GGEL + IV R+ E ++ +QIL ++AY H
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HR+LKPEN+LL + +KL DFGL E G+P Y +PEV+K
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK- 179
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 239
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ SML V P KRI L W+
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWI 264
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 239
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ SML V P KRI L W+
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWI 264
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K Y D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ Y ++ +G G F+ V+ H TG + A KI+ L D +++ E + +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I+ S ++V + GGEL + IV R+ E ++ +QIL ++AY H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HR+LKPEN+LL + +KL DFGL E G+P Y +PEV+K
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK- 180
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ SML V P KRI L W+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ SML V P KRI L W+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K Y D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 24/274 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQ 66
+ L R +G G +AKV L T A+K++KK + ED+ V+ E + + S H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ L +T S +F VIEY GG+L+ H+ +++L E+ +R + +I A+ YLH G
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQY 184
+RDLK +NVLLD ++KL D+G+C + GL TS CG+PNY APE+++G+
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE---GLRPGDTTSXFCGTPNYIAPEILRGED- 182
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 235
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 242
Query: 236 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 263
+++S L +P +R+ D+ GH + +
Sbjct: 243 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 464
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 242
Query: 465 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 492
+++S L +P +R+ D+ GH + +
Sbjct: 243 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ 361
YG D W++GV+++ ++ G PFD SD+ DQ
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS 64
+ Y ++ +G G F+ V+ H TG + A KI+ L D +++ E + +
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
H +I +L I+ S ++V + GGEL + IV R+ E ++ +QIL ++AY H
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 125 LGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
G HR+LKPEN+LL + +KL DFGL E G+P Y +PEV+K
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK- 203
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWV 262
++ SML V P KRI L W+
Sbjct: 264 LIDSMLTVNPKKRITADQALKVPWI 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K Y D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ SML V P KRI L W+
Sbjct: 264 LIDSMLTVNPKKRITADQALKVPWI 288
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K Y D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
+Y+ R +G GGFAK T + T E A K++ K+ L + + K+ EI K + +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
H+ E +++V+E C LL+ R+ + E E+R F RQ + V YLH+
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 145
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLK N+ L+ + ++K+ DFGL K E E + + CG+PNY APEV+ K+ +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVL-CKKGH 203
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
E D+WS+G +LY LL G PF++ + + Y +I +Y+ P ++P + ++R ML
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 263
Query: 246 EPGKRIKIQDLLGHNWVKMG 265
+P R + +LL + G
Sbjct: 264 DPTLRPSVAELLTDEFFTSG 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 404 LCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE 456
LC P+ K+ + E D+WS+G +LY LL G PF++ + + Y +I +Y+
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 457 PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + ++R ML +P R + +LL + G
Sbjct: 246 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------HFMPICTILISQ 380
K+ + E D+WS+G +LY LL G PF++ + + Y +I H P+ + LI +
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 259
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 24/274 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQ 66
+ L R +G G +AKV L T A+K++KK + ED+ V+ E + + S H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ L +T S +F VIEY GG+L+ H+ +++L E+ +R + +I A+ YLH G
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQY 184
+RDLK +NVLLD ++KL D+G+C + GL TS CG+PNY APE+++G+
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE---GLRPGDTTSXFCGTPNYIAPEILRGED- 186
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 235
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 246
Query: 236 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 263
+++S L +P +R+ D+ GH + +
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 464
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 246
Query: 465 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 492
+++S L +P +R+ D+ GH + +
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ 361
YG D W++GV+++ ++ G PFD SD+ DQ
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
+Y+ R +G GGFAK T + T E A K++ K+ L + + K+ EI K + +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
H+ E +++V+E C LL+ R+ + E E+R F RQ + V YLH+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLK N+ L+ + ++K+ DFGL K E E + + CG+PNY APEV+ K+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAPEVL-CKKGH 219
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
E D+WS+G +LY LL G PF++ + + Y +I +Y+ P ++P + ++R ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 246 EPGKRIKIQDLLGHNWVKMG 265
+P R + +LL + G
Sbjct: 280 DPTLRPSVAELLTDEFFTSG 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 404 LCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE 456
LC P+ K+ + E D+WS+G +LY LL G PF++ + + Y +I +Y+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 457 PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + ++R ML +P R + +LL + G
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------HFMPICTILISQ 380
K+ + E D+WS+G +LY LL G PF++ + + Y +I H P+ + LI +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EINALKHISH 65
+Y+ R +G GGFAK T + T E A K++ K+ L + + K+ EI K + +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
H+ E +++V+E C LL+ R+ + E E+R F RQ + V YLH+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRDLK N+ L+ + ++K+ DFGL K E E + + CG+PNY APEV+ K+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVL-CKKGH 219
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
E D+WS+G +LY LL G PF++ + + Y +I +Y+ P ++P + ++R ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 246 EPGKRIKIQDLLGHNWVKMG 265
+P R + +LL + G
Sbjct: 280 DPTLRPSVAELLTDEFFTSG 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 404 LCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE 456
LC P+ K+ + E D+WS+G +LY LL G PF++ + + Y +I +Y+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 457 PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
P ++P + ++R ML +P R + +LL + G
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS-------HFMPICTILISQ 380
K+ + E D+WS+G +LY LL G PF++ + + Y +I H P+ + LI +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 151/274 (55%), Gaps = 24/274 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQ 66
+ L R +G G +AKV L T A++++KK + ED+ V+ E + + S H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ L +T S +F VIEY GG+L+ H+ +++L E+ +R + +I A+ YLH G
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQY 184
+RDLK +NVLLD ++KL D+G+C + GL TS CG+PNY APE+++G+
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE---GLRPGDTTSTFCGTPNYIAPEILRGED- 229
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 235
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289
Query: 236 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 263
+++S L +P +R+ D+ GH + +
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ-----LYDKILNGKYTEPPWMSPNS 464
YG D W++GV+++ ++ G PFD SD+ DQ L+ IL + P +S +
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289
Query: 465 RQIVRSMLQVEPGKRI------KIQDLLGHNWVK 492
+++S L +P +R+ D+ GH + +
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFD----SDSIDQ 361
YG D W++GV+++ ++ G PFD SD+ DQ
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++ CG+P Y APEV++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 241 KKDPKQRL 248
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 242 KDPKQRL 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++ CG+P Y APEV++
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 187 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 245
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 246 KKDPKQRL 253
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 246
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 247 KDPKQRL 253
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++ CG+P Y APEV++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 241 KKDPKQRL 248
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 242 KDPKQRL 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 141/266 (53%), Gaps = 20/266 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-------EDLPRVKL-EINALKHIS-HQ 66
+G G + V+ H T ++ A+KI+ G ++L L E++ L+ +S H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I +L ET++ F+V + GEL D++ E+ L EKE+R R +L + LH L
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY-- 184
HRDLKPEN+LLD + N+KL DFG + + G +L++ CG+P+Y APE+I+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLRSVCGTPSYLAPEIIECSMNDN 202
Query: 185 ---YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
YG E D+WS GV++Y LL G PF + I++G Y P W S +
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKD 262
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+V L V+P KR ++ L H + +
Sbjct: 263 LVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 398 LRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-- 455
L I+ CS + YG E D+WS GV++Y LL G PF + I++G Y
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 456 EPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
P W S + +V L V+P KR ++ L H + +
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS GV++Y LL G PF
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N + + +G G F KV L TG A+KI++K + +++ E L++ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ L +T + V+EY GGEL H+ + E+ +R + +I+SA+ YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQ 183
+RD+K EN++LD++ ++K+ DFGLC + G+ + ++ CG+P Y APEV++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE---GISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 244 QVEPGKRI 251
+ +P +R+
Sbjct: 241 KKDPKQRL 248
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P +SP ++ ++ +L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 242 KDPKQRL 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-------EDLPRVKL-EINALKHIS-HQ 66
+G G + V+ H T ++ A+KI+ G ++L L E++ L+ +S H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I +L ET++ F+V + GEL D++ E+ L EKE+R R +L + LH L
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY-- 184
HRDLKPEN+LLD + N+KL DFG + + G +L+ CG+P+Y APE+I+
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGTPSYLAPEIIECSMNDN 189
Query: 185 ---YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
YG E D+WS GV++Y LL G PF + I++G Y P W S +
Sbjct: 190 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKD 249
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+V L V+P KR ++ L H + +
Sbjct: 250 LVSRFLVVQPQKRYTAEEALAHPFFQ 275
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 398 LRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-- 455
L I+ CS + YG E D+WS GV++Y LL G PF + I++G Y
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 236
Query: 456 EPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
P W S + +V L V+P KR ++ L H + +
Sbjct: 237 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS GV++Y LL G PF
Sbjct: 193 YGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-------EDLPRVKL-EINALKHIS-HQ 66
+G G + V+ H T ++ A+KI+ G ++L L E++ L+ +S H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I +L ET++ F+V + GEL D++ E+ L EKE+R R +L + LH L
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY-- 184
HRDLKPEN+LLD + N+KL DFG + + G +L+ CG+P+Y APE+I+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGTPSYLAPEIIECSMNDN 202
Query: 185 ---YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
YG E D+WS GV++Y LL G PF + I++G Y P W S +
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKD 262
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+V L V+P KR ++ L H + +
Sbjct: 263 LVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 398 LRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-- 455
L I+ CS + YG E D+WS GV++Y LL G PF + I++G Y
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 456 EPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
P W S + +V L V+P KR ++ L H + +
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS GV++Y LL G PF
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Query: 2 KYIDLR---NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLE 56
K DLR Y + + +G G F +V+L H T + A+K++ K + D E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 57 INALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL 116
+ + + + +LF + +++MV+EY PGG+L+ +++ + EK +R + +++
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVV 178
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
A+ +H +G+ HRD+KP+N+LLD++ +LKL DFG C K + T+ G+P+Y +P
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 177 EVIK---GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 224
EV+K G YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 323 RKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+ + G YYG E D WS+GV LY +L G PF +DS+ Y KI++H
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 453
YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Query: 2 KYIDLR---NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLE 56
K DLR Y + + +G G F +V+L H T + A+K++ K + D E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 57 INALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL 116
+ + + + +LF + +++MV+EY PGG+L+ +++ + EK +R + +++
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVV 183
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
A+ +H +G+ HRD+KP+N+LLD++ +LKL DFG C K + T+ G+P+Y +P
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 177 EVIK---GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 224
EV+K G YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 323 RKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+ + G YYG E D WS+GV LY +L G PF +DS+ Y KI++H
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 453
YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Query: 2 KYIDLR---NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLE 56
K DLR Y + + +G G F +V+L H T + A+K++ K + D E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 57 INALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL 116
+ + + + +LF + +++MV+EY PGG+L+ +++ + EK +R + +++
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVV 183
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
A+ +H +G+ HRD+KP+N+LLD++ +LKL DFG C K + T+ G+P+Y +P
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 177 EVIK---GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 224
EV+K G YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 323 RKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+ + G YYG E D WS+GV LY +L G PF +DS+ Y KI++H
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 453
YYG E D WS+GV LY +L G PF +DS+ Y KI+N K
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 137/257 (53%), Gaps = 12/257 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKL 71
RT+G+G F +V L G A+K++KK + + + E L ++H I ++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + + IFM+++Y GGEL + + QR ++ + ++ A+ YLH +RD
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKPEN+LLD+N ++K+ DFG AK + L CG+P+Y APEV+ K Y S D
Sbjct: 132 LKPENILLDKNGHIKITDFGF-AKYVPDVTYXL---CGTPDYIAPEVVSTKPYNKS-IDW 186
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN-----SRQIVRSMLQVE 246
WS G+++Y +L G+ PF + + Y+KILN + PP+ + + SR I R + Q
Sbjct: 187 WSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 246
Query: 247 PGKRIKIQDLLGHNWVK 263
+ +D+ H W K
Sbjct: 247 GNLQNGTEDVKNHPWFK 263
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 404 LCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE 456
LC P S + Y D WS G+++Y +L G+ PF + + Y+KILN +
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
Query: 457 PPWMSPN-----SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
PP+ + + SR I R + Q + +D+ H W K
Sbjct: 223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
Y D WS G+++Y +L G+ PF + + Y+KIL+
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 154/281 (54%), Gaps = 24/281 (8%)
Query: 13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKL 71
++ +G G F+ + H + + A+KI+ K + EI ALK H +I KL
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA----NTQKEITALKLCEGHPNIVKL 71
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+V H F+V+E GGEL + I +++ E E+ R+++SAV+++H +G HRD
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 132 LKPENVLL-DRNQNL--KLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
LKPEN+L D N NL K+IDFG A+ + L+T C + +YAAPE++ + Y
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGF-ARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDES 189
Query: 189 TDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
D+WS+GV+LY +L G +PF S S ++ KI G ++ W +S ++
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPE--DNPVSFRPD 276
+++ +L V+P KR+K+ L + W++ G + NP+ PD
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL-MTPD 289
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYT--EPPW--MSP 462
Y D+WS+GV+LY +L G +PF S S ++ KI G ++ W +S
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQ 245
Query: 463 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE--DNPLREKD 504
++ +++ +L V+P KR+K+ L + W++ G + NPL D
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPD 289
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDS 356
Y D+WS+GV+LY +L G +PF S
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 136/248 (54%), Gaps = 6/248 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG-EDLPRVKLEINALKHI 63
+Q+ L + +G G F KV L + + A+K++KKATL D R K+E + L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
+H I KL +T +++++++ GG+L + + E++ + + ++ A+ +LH
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
LG +RDLKPEN+LLD ++KL DFGL +K E + + CG+ Y APEV+ +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGL-SKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
+ S D WS GV+++ +L G LPF + IL K P ++SP ++ ++R +
Sbjct: 203 HTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 244 QVEPGKRI 251
+ P R+
Sbjct: 262 KRNPANRL 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 469
+++ + D WS GV+++ +L G LPF + IL K P ++SP ++ ++R
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
Query: 470 SMLQVEPGKRI 480
+ + P R+
Sbjct: 259 MLFKRNPANRL 269
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 312 YDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y C + ++ + ++ + D WS GV+++ +L G LPF + IL
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 136/248 (54%), Gaps = 6/248 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG-EDLPRVKLEINALKHI 63
+Q+ L + +G G F KV L + + A+K++KKATL D R K+E + L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
+H I KL +T +++++++ GG+L + + E++ + + ++ A+ +LH
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
LG +RDLKPEN+LLD ++KL DFGL +K E + + CG+ Y APEV+ +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGL-SKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
+ S D WS GV+++ +L G LPF + IL K P ++SP ++ ++R +
Sbjct: 203 HTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 244 QVEPGKRI 251
+ P R+
Sbjct: 262 KRNPANRL 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 469
+++ + D WS GV+++ +L G LPF + IL K P ++SP ++ ++R
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
Query: 470 SMLQVEPGKRI 480
+ + P R+
Sbjct: 259 MLFKRNPANRL 269
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 312 YDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPF 354
Y C + ++ + ++ + D WS GV+++ +L G LPF
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 146/276 (52%), Gaps = 12/276 (4%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK--ATLGEDLPRVKLEINALKHI-SHQ 66
+IL + +G G F KV LA T + AIK +KK + +D+ +E L H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ +F +T ++F V+EY GG+L+ HI + + + +I+ + +LH G
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
+RDLK +N+LLD++ ++K+ DFG+C + G +++ CG+P+Y APE++ G++Y
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
S D WS GV+LY +L G PF ++L+ I P W+ ++ ++ + E
Sbjct: 198 S-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE 256
Query: 247 PGKRIKIQ-DLLGH------NWVKMGPEDNPVSFRP 275
P KR+ ++ D+ H NW ++ ++ FRP
Sbjct: 257 PEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRP 292
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
Q Y D WS GV+LY +L G PF ++L+ I P W+ ++ ++ +
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 252
Query: 472 LQVEPGKRIKIQ-DLLGH------NWVKMGPE--DNPLREK 503
EP KR+ ++ D+ H NW ++ + D P R K
Sbjct: 253 FVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPK 293
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
Q Y D WS GV+LY +L G PF ++L+ I
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 136/248 (54%), Gaps = 6/248 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG-EDLPRVKLEINALKHI 63
+Q+ L + +G G F KV L + + A+K++KKATL D R K+E + L +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
+H I KL +T +++++++ GG+L + + E++ + + ++ A+ +LH
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
LG +RDLKPEN+LLD ++KL DFGL +K E + + CG+ Y APEV+ +
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGL-SKESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
+ S D WS GV+++ +L G LPF + IL K P ++SP ++ ++R +
Sbjct: 204 HTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 262
Query: 244 QVEPGKRI 251
+ P R+
Sbjct: 263 KRNPANRL 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 469
+++ + D WS GV+++ +L G LPF + IL K P ++SP ++ ++R
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 259
Query: 470 SMLQVEPGKRI 480
+ + P R+
Sbjct: 260 MLFKRNPANRL 270
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 312 YDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
Y C + ++ + ++ + D WS GV+++ +L G LPF + IL
Sbjct: 185 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 140/249 (56%), Gaps = 9/249 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N++ + +G G F KV L TG A+KI+KK + +++ E L++ H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH-H 124
+ L +T + V+EY GGEL H+ + E +R + +I+SA+ YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGK 182
+RDLK EN++LD++ ++K+ DFGLC + G++ + ++T CG+P Y APEV++
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE---GIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y G D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +
Sbjct: 325 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 383
Query: 243 LQVEPGKRI 251
L+ +P +R+
Sbjct: 384 LKKDPKQRL 392
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +L+
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 385
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 386 KDPKQRL 392
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 140/249 (56%), Gaps = 9/249 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N++ + +G G F KV L TG A+KI+KK + +++ E L++ H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH-H 124
+ L +T + V+EY GGEL H+ + E +R + +I+SA+ YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGK 182
+RDLK EN++LD++ ++K+ DFGLC + G++ + ++T CG+P Y APEV++
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE---GIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y G D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +
Sbjct: 328 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 386
Query: 243 LQVEPGKRI 251
L+ +P +R+
Sbjct: 387 LKKDPKQRL 395
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +L+
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 388
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 389 KDPKQRL 395
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 21/272 (7%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
I + Y ++ +G G ++ K H T + A+KI+ K+ P ++EI L++
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEI-LLRYG 73
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
H +I L V + ++++V E GGELLD I+ ++ E+E+ A I V YLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 124 HLGYAHRDLKPENVL-LDRNQN---LKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPE 177
G HRDLKP N+L +D + N +++ DFG + E GL L T C + N+ APE
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LMTPCYTANFVAPE 190
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS---DSIDQLYDKILNGKYTEPP--W-- 230
V++ +Q Y + D+WS+GV+LY +L G+ PF + D+ +++ +I +GK++ W
Sbjct: 191 VLE-RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249
Query: 231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+S ++ +V ML V+P +R+ +L H W+
Sbjct: 250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDS---DSIDQLYDKILNGKYTEPP--W--MSPN 463
+Q Y + D+WS+GV+LY +L G+ PF + D+ +++ +I +GK++ W +S
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
++ +V ML V+P +R+ +L H W+
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWI 281
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
+Q Y + D+WS+GV+LY +L G+ PF ++ D ++IL+
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILA 233
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 154/313 (49%), Gaps = 54/313 (17%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINA 59
++L+ +Y L+ +G G + V++A T AIKIM K + + D+ R+K E+
Sbjct: 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL 81
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDH---------------IVERQRL- 103
+K + H +I +L++V E +I +V+E C GG LLD +V+ Q
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 104 --------------GEKESRAF----------FRQILSAVAYLHHLGYAHRDLKPENVLL 139
G +ES F RQI SA+ YLH+ G HRD+KPEN L
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 140 DRNQN--LKLIDFGLCA---KPEGGLESQLQTSCGSPNYAAPEVIK-GKQYYGSETDVWS 193
N++ +KL+DFGL K G + T G+P + APEV+ + YG + D WS
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 194 MGVMLYALLCGFLPF----DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
GV+L+ LL G +PF D+D+I Q+ +K L + +SP +R ++ ++L +
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 250 RIKIQDLLGHNWV 262
R L H W+
Sbjct: 322 RFDAMRALQHPWI 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPF----DSDSIDQLYDKILNGKYTEPPWMSPNS 464
++ + YG + D WS GV+L+ LL G +PF D+D+I Q+ +K L + +SP +
Sbjct: 248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLA 307
Query: 465 RQIVRSMLQVEPGKRIKIQDLLGHNWV 491
R ++ ++L +R L H W+
Sbjct: 308 RDLLSNLLNRNVDERFDAMRALQHPWI 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF----DSDSIDQLYDKILSHFMPICTIL 377
YG + D WS GV+L+ LL G +PF D+D+I Q+ +K L P +L
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 166/330 (50%), Gaps = 36/330 (10%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
KY + + ++ +G G KV H TG+K A+K++ D P+ + E++
Sbjct: 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY------DSPKARQEVDHHW 76
Query: 62 HISHQ-HICKLFQVIETSSH----IFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQ 114
S HI + V E H + +++E GGEL I ER Q E+E+ R
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP 171
I +A+ +LH AHRD+KPEN+L +++ LKL DFG + ++ LQT C +P
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTP 193
Query: 172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKY-- 225
Y APEV+ G + Y D+WS+GV++Y LLCGF PF S++ + +I G+Y
Sbjct: 194 YYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 252
Query: 226 TEPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKD 283
P W +S +++Q++R +L+ +P +R+ I + H W+ + V P H R
Sbjct: 253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN---QSMVVPQTPLHTAR--- 306
Query: 284 DDVIKVMADHKQLSPDDMWSQLNEWTYNYD 313
V++ DH ++M S L +YD
Sbjct: 307 --VLQEDKDHWDEVKEEMTSALATMRVDYD 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKY--TEPPW--MSPNSR 465
Y D+WS+GV++Y LLCGF PF S++ + +I G+Y P W +S +++
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 265
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWVK--MGPEDNPLREKDDDVIKVMADHKQLSPDDMW 523
Q++R +L+ +P +R+ I + H W+ M PL V++ DH ++M
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA--RVLQEDKDHWDEVKEEMT 323
Query: 524 SQLNEWTYNYD 534
S L +YD
Sbjct: 324 SALATMRVDYD 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
G + Y D+WS+GV++Y LLCGF PF S++
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 10/263 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQ 66
+ Y L +G G F+ V+ ++ A KI+ L D +++ E + + H
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+I +L I ++V + GGEL + IV R+ E ++ QIL +V ++H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 127 YAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
HRDLKPEN+LL + +KL DFGL + +G ++ + G+P Y +PEV++ K
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-GTPGYLSPEVLR-KD 208
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQIV 239
YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++ ++
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
ML + P KRI L H WV
Sbjct: 269 NQMLTINPAKRITADQALKHPWV 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 466
K YG D+W+ GV+LY LL G+ PF + +LY +I G Y P W ++P ++
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 266
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML + P KRI L H WV
Sbjct: 267 LINQMLTINPAKRITADQALKHPWV 291
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
K YG D+W+ GV+LY LL G+ PF + +LY +I
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 166/330 (50%), Gaps = 36/330 (10%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
KY + + ++ +G G KV H TG+K A+K++ D P+ + E++
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY------DSPKARQEVDHHW 57
Query: 62 HISH-QHICKLFQVIETSSH----IFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQ 114
S HI + V E H + +++E GGEL I ER Q E+E+ R
Sbjct: 58 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP 171
I +A+ +LH AHRD+KPEN+L +++ LKL DFG + ++ LQT C +P
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTP 174
Query: 172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKY-- 225
Y APEV+ G + Y D+WS+GV++Y LLCGF PF S++ + +I G+Y
Sbjct: 175 YYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 233
Query: 226 TEPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKD 283
P W +S +++Q++R +L+ +P +R+ I + H W+ + V P H R
Sbjct: 234 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN---QSMVVPQTPLHTAR--- 287
Query: 284 DDVIKVMADHKQLSPDDMWSQLNEWTYNYD 313
V++ DH ++M S L +YD
Sbjct: 288 --VLQEDKDHWDEVKEEMTSALATMRVDYD 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKY--TEPPW--MSPNSR 465
Y D+WS+GV++Y LLCGF PF S++ + +I G+Y P W +S +++
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 246
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWVK--MGPEDNPLREKDDDVIKVMADHKQLSPDDMW 523
Q++R +L+ +P +R+ I + H W+ M PL V++ DH ++M
Sbjct: 247 QLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA--RVLQEDKDHWDEVKEEMT 304
Query: 524 SQLNEWTYNYD 534
S L +YD
Sbjct: 305 SALATMRVDYD 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
G + Y D+WS+GV++Y LLCGF PF S++
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 136/258 (52%), Gaps = 6/258 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISH 65
+ + + R +G G F V LA +A+K++ K+ L ++ +++ EI H+ H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I +++ I++++E+ P GEL + + R E+ S F ++ A+ Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRD+KPEN+L+ LK+ DFG + + CG+ +Y PE+I+GK +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVH---APSLRRRXMCGTLDYLPPEMIEGKT-H 189
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
+ D+W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRY 249
Query: 246 EPGKRIKIQDLLGHNWVK 263
P +R+ ++ ++ H WVK
Sbjct: 250 HPPQRLPLKGVMEHPWVK 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 474 VEPGKRIKIQDLLGHNWVK 492
P +R+ ++ ++ H WVK
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS---HFMPICT----ILISQ--- 380
+ + D+W GV+ Y L G PFDS S + + +I++ F P + LIS+
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 381 YFPTILLPCK 390
Y P LP K
Sbjct: 249 YHPPQRLPLK 258
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA +A+K++ K+ L ++ +++ EI H+ H +I ++
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ I++++E+ P GEL + + R E+ S F ++ A+ Y H HRD
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+L+ LK+ DFG + + CG+ +Y PE+I+GK + + D+
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVH---APSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDL 195
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+ P +R+
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRL 255
Query: 252 KIQDLLGHNWVK 263
++ ++ H WVK
Sbjct: 256 PLKGVMEHPWVK 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 474 VEPGKRIKIQDLLGHNWVK 492
P +R+ ++ ++ H WVK
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS---HFMPICT----ILISQ--- 380
+ + D+W GV+ Y L G PFDS S + + +I++ F P + LIS+
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 381 YFPTILLPCK 390
Y P LP K
Sbjct: 249 YHPPQRLPLK 258
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 136/258 (52%), Gaps = 6/258 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISH 65
+ + + R +G G F V LA +A+K++ K+ L ++ +++ EI H+ H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I +++ I++++E+ P GEL + + R E+ S F ++ A+ Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRD+KPEN+L+ LK+ DFG + + CG+ +Y PE+I+GK +
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVH---APSLRRRXMCGTLDYLPPEMIEGKT-H 190
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
+ D+W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRY 250
Query: 246 EPGKRIKIQDLLGHNWVK 263
P +R+ ++ ++ H WVK
Sbjct: 251 HPPQRLPLKGVMEHPWVK 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+W GV+ Y L G PFDS S + + +I+N PP++S S+ ++ +L+
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 474 VEPGKRIKIQDLLGHNWVK 492
P +R+ ++ ++ H WVK
Sbjct: 250 YHPPQRLPLKGVMEHPWVK 268
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS---HFMPICT----ILISQ--- 380
+ + D+W GV+ Y L G PFDS S + + +I++ F P + LIS+
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 381 YFPTILLPCK 390
Y P LP K
Sbjct: 250 YHPPQRLPLK 259
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 135/248 (54%), Gaps = 6/248 (2%)
Query: 8 NQYILERTVGSGGFAKVKLATHVL---TGEKVAIKIMKKATLG-EDLPRVKLEINALKHI 63
+ + L + +G G F KV L V +G A+K++KKATL D R K+E + L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
+H + KL +T +++++++ GG+L + + E++ + + ++ + +LH
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
LG +RDLKPEN+LLD ++KL DFGL +K E + + CG+ Y APEV+ +Q
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGL-SKEAIDHEKKAYSFCGTVEYMAPEVV-NRQ 205
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 243
+ D WS GV+++ +L G LPF + IL K P ++S ++ ++R++
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALF 265
Query: 244 QVEPGKRI 251
+ P R+
Sbjct: 266 KRNPANRL 273
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 393 QVINLLRSAIVLCS-----APS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 445
+ I+ + A C AP ++Q + D WS GV+++ +L G LPF +
Sbjct: 179 EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
Query: 446 YDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 480
IL K P ++S ++ ++R++ + P R+
Sbjct: 239 MTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRL 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 312 YDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPF 354
Y C + ++ + +Q + D WS GV+++ +L G LPF
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 139/249 (55%), Gaps = 9/249 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N++ + +G G F KV L TG A+KI+KK + +++ E L++ H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH-H 124
+ L +T + V+EY GGEL H+ + E +R + +I+SA+ YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGK 182
+RDLK EN++LD++ ++K+ DFGLC + G++ + ++ CG+P Y APEV++
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE---GIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y G D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +
Sbjct: 187 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 245
Query: 243 LQVEPGKRI 251
L+ +P +R+
Sbjct: 246 LKKDPKQRL 254
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +L+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 247
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 248 KDPKQRL 254
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 224
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 20/274 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALK 61
+ Y L +G G F+ V+ + TG++ A+KI+ A G +K E +
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----EKESRAFFRQILS 117
+ H HI +L + + ++MV E+ G +L IV+R G E + + RQIL
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAK-PEGGLESQLQTSCGSPNY 173
A+ Y H HRD+KP VLL +N +KL FG+ + E GL + + G+P++
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHF 199
Query: 174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W- 230
APEV+K ++ YG DVW GV+L+ LL G LPF + ++L++ I+ GKY P W
Sbjct: 200 MAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWS 257
Query: 231 -MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S +++ +VR ML ++P +RI + + L H W+K
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 372 PICTILISQYFPTILLPCKVGQVINLLRSAIVLCS--------APS--SKQYYGSETDVW 421
P C +L S+ + G I L S +V AP ++ YG DVW
Sbjct: 158 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 422 SMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W--MSPNSRQIVRSMLQVEPG 477
GV+L+ LL G LPF + ++L++ I+ GKY P W +S +++ +VR ML ++P
Sbjct: 218 GCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 478 KRIKIQDLLGHNWVK 492
+RI + + L H W+K
Sbjct: 277 ERITVYEALNHPWLK 291
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
++ YG DVW GV+L+ LL G LPF + ++L++ I+
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 245
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 139/249 (55%), Gaps = 9/249 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N++ + +G G F KV L TG A+KI+KK + +++ E L++ H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH-H 124
+ L +T + V+EY GGEL H+ + E +R + +I+SA+ YLH
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGK 182
+RDLK EN++LD++ ++K+ DFGLC + G++ + ++ CG+P Y APEV++
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE---GIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y G D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +
Sbjct: 186 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 244
Query: 243 LQVEPGKRI 251
L+ +P +R+
Sbjct: 245 LKKDPKQRL 253
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +L+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 246
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 247 KDPKQRL 253
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 223
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 139/249 (55%), Gaps = 9/249 (3%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH 65
N++ + +G G F KV L TG A+KI+KK + +++ E L++ H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH-H 124
+ L +T + V+EY GGEL H+ + E +R + +I+SA+ YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGK 182
+RDLK EN++LD++ ++K+ DFGLC + G++ + ++ CG+P Y APEV++
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE---GIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
Y G D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +
Sbjct: 185 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 243
Query: 243 LQVEPGKRI 251
L+ +P +R+
Sbjct: 244 LKKDPKQRL 252
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
YG D W +GV++Y ++CG LPF + ++L++ IL + P + P ++ ++ +L+
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 245
Query: 474 VEPGKRI 480
+P +R+
Sbjct: 246 KDPKQRL 252
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
YG D W +GV++Y ++CG LPF + ++L++ IL
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 20/274 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALK 61
+ Y L +G G F+ V+ + TG++ A+KI+ A G +K E +
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----EKESRAFFRQILS 117
+ H HI +L + + ++MV E+ G +L IV+R G E + + RQIL
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN---LKLIDFGLCAK-PEGGLESQLQTSCGSPNY 173
A+ Y H HRD+KP VLL +N +KL FG+ + E GL + + G+P++
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHF 201
Query: 174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W- 230
APEV+K ++ YG DVW GV+L+ LL G LPF + ++L++ I+ GKY P W
Sbjct: 202 MAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWS 259
Query: 231 -MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+S +++ +VR ML ++P +RI + + L H W+K
Sbjct: 260 HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 372 PICTILISQYFPTILLPCKVGQVINLLRSAIVLCS--------APS--SKQYYGSETDVW 421
P C +L S+ + G I L S +V AP ++ YG DVW
Sbjct: 160 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 219
Query: 422 SMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--W--MSPNSRQIVRSMLQVEPG 477
GV+L+ LL G LPF + ++L++ I+ GKY P W +S +++ +VR ML ++P
Sbjct: 220 GCGVILFILLSGCLPF-YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 278
Query: 478 KRIKIQDLLGHNWVK 492
+RI + + L H W+K
Sbjct: 279 ERITVYEALNHPWLK 293
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
++ YG DVW GV+L+ LL G LPF + ++L++ I+
Sbjct: 209 REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 145/276 (52%), Gaps = 12/276 (4%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK--ATLGEDLPRVKLEINALKHI-SHQ 66
+ L + +G G F KV LA T + AIK +KK + +D+ +E L H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ +F +T ++F V+EY GG+L+ HI + + + +I+ + +LH G
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
+RDLK +N+LLD++ ++K+ DFG+C + G +++ CG+P+Y APE++ G++Y
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNEFCGTPDYIAPEILLGQKYNH 198
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
S D WS GV+LY +L G PF ++L+ I P W+ ++ ++ + E
Sbjct: 199 S-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE 257
Query: 247 PGKRIKIQ-DLLGH------NWVKMGPEDNPVSFRP 275
P KR+ ++ D+ H NW ++ ++ FRP
Sbjct: 258 PEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRP 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
Q Y D WS GV+LY +L G PF ++L+ I P W+ ++ ++ +
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 253
Query: 472 LQVEPGKRIKIQ-DLLGH------NWVKMGPE--DNPLREK 503
EP KR+ ++ D+ H NW ++ + D P R K
Sbjct: 254 FVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPK 294
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
Q Y D WS GV+LY +L G PF ++L+ I
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 139/251 (55%), Gaps = 14/251 (5%)
Query: 10 YILERTVGSGGFAKV---KLATHVLTGEKVAIKIMKKATL---GEDLPRVKLEINALKHI 63
+ L R +G GG+ KV + T TG+ A+K++KKA + +D K E N L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFF-RQILSAVAYL 122
H I L +T +++++EY GGEL + ER+ + +++ F+ +I A+ +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALGHL 137
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP--EGGLESQLQTSCGSPNYAAPEVIK 180
H G +RDLKPEN++L+ ++KL DFGLC + +G + T CG+ Y APE++
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILM 194
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 240
+ + D WS+G ++Y +L G PF ++ + DKIL K PP+++ +R +++
Sbjct: 195 -RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 241 SMLQVEPGKRI 251
+L+ R+
Sbjct: 254 KLLKRNAASRL 264
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 419 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 478
D WS+G ++Y +L G PF ++ + DKIL K PP+++ +R +++ +L+
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAAS 262
Query: 479 R----------IKIQDLLGH-NW-----VKMGPEDNPLREKDDDVIKVMADHKQLSPDD 521
R ++ H NW K+ P PL + ++DV + + + +P D
Sbjct: 263 RLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVD 321
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 305 LNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 364
+++ T + C + ++ + + + D WS+G ++Y +L G PF ++ + D
Sbjct: 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 365 KIL 367
KIL
Sbjct: 232 KIL 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 148/293 (50%), Gaps = 22/293 (7%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--------GEDLPRVKLEI 57
L +Y++ +G G + KVK VL E + + +K GE VK EI
Sbjct: 3 LIGKYLMGDLLGEGSYGKVK---EVLDSETLCRRAVKILKKKKLRRIPNGEA--NVKKEI 57
Query: 58 NALKHISHQHICKLFQVI--ETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFR 113
L+ + H+++ +L V+ E ++MV+EYC G E+LD + E+ R ++ +F
Sbjct: 58 QLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFC 116
Query: 114 QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPN 172
Q++ + YLH G H+D+KP N+LL LK+ G+ A + +TS GSP
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 173 YAAPEVIKG-KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM 231
+ PE+ G + G + D+WS GV LY + G PF+ D+I +L++ I G Y P
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDC 236
Query: 232 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV--KMGPEDNPVSFRPDHELREK 282
P +++ ML+ EP KR I+ + H+W K P + PV P + +++
Sbjct: 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDR 289
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ G + D+WS GV LY + G PF+ D+I +L++ I G Y P P +++ ML
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGML 248
Query: 473 QVEPGKRIKIQDLLGHNWV--KMGPEDNPL 500
+ EP KR I+ + H+W K P + P+
Sbjct: 249 EYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 330 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ G + D+WS GV LY + G PF+ D+I +L++ I
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P GE+ + + + E+ + + ++ +A+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 183
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 184 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 143/264 (54%), Gaps = 11/264 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ K L + +++ E+
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + R E+ + + ++ +A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL N LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS---SRRDTLCGTLDYLPPEMI 182
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++ + + Y +I ++T P +++ +R ++
Sbjct: 183 EGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLI 241
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVK 263
+L+ +R+ + ++L H W+K
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIK 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 46/76 (60%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 476
+ D+WS+GV+ Y L G PF++ + + Y +I ++T P +++ +R ++ +L+
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 477 GKRIKIQDLLGHNWVK 492
+R+ + ++L H W+K
Sbjct: 250 SQRLTLAEVLEHPWIK 265
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ D+WS+GV+ Y L G PF++ + + Y +I
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 148/272 (54%), Gaps = 21/272 (7%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
I + Y ++ +G G ++ K H T + A+KI+ K+ P ++EI L++
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRD---PTEEIEI-LLRYG 73
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
H +I L V + ++++V E GGELLD I+ ++ E+E+ A I V YLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 124 HLGYAHRDLKPENVL-LDRNQN---LKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPE 177
G HRDLKP N+L +D + N +++ DFG + E GL L T C + N+ APE
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LXTPCYTANFVAPE 190
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS---DSIDQLYDKILNGKYTEPP--W-- 230
V++ +Q Y + D+WS+GV+LY L G+ PF + D+ +++ +I +GK++ W
Sbjct: 191 VLE-RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249
Query: 231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+S ++ +V L V+P +R+ +L H W+
Sbjct: 250 VSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPFDS---DSIDQLYDKILNGKYTEPP--W--MSPN 463
+Q Y + D+WS+GV+LY L G+ PF + D+ +++ +I +GK++ W +S
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
++ +V L V+P +R+ +L H W+
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWI 281
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 328 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
+Q Y + D+WS+GV+LY L G+ PF ++ D ++IL+
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILA 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 143/264 (54%), Gaps = 11/264 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ K L + +++ E+
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + R E+ + + ++ +A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL N LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 182
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++ + + Y +I ++T P +++ +R ++
Sbjct: 183 EGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLI 241
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVK 263
+L+ +R+ + ++L H W+K
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIK 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 46/76 (60%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 476
+ D+WS+GV+ Y L G PF++ + + Y +I ++T P +++ +R ++ +L+
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 477 GKRIKIQDLLGHNWVK 492
+R+ + ++L H W+K
Sbjct: 250 SQRLTLAEVLEHPWIK 265
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ D+WS+GV+ Y L G PF++ + + Y +I
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 10 YILERTVGSGGFAKV---KLATHVLTGEKVAIKIMKKATL---GEDLPRVKLEINALKHI 63
+ L R +G GG+ KV + T TG+ A+K++KKA + +D K E N L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFF-RQILSAVAYL 122
H I L +T +++++EY GGEL + ER+ + +++ F+ +I A+ +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALGHL 137
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP--EGGLESQLQTSCGSPNYAAPEVIK 180
H G +RDLKPEN++L+ ++KL DFGLC + +G + CG+ Y APE++
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF---CGTIEYMAPEILM 194
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVR 240
+ + D WS+G ++Y +L G PF ++ + DKIL K PP+++ +R +++
Sbjct: 195 -RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 241 SMLQVEPGKRI 251
+L+ R+
Sbjct: 254 KLLKRNAASRL 264
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
D WS+G ++Y +L G PF ++ + DKIL K PP+++ +R +++ +L+
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAA 261
Query: 478 KR----------IKIQDLLGH-NW-----VKMGPEDNPLREKDDDVIKVMADHKQLSPDD 521
R ++ H NW K+ P PL + ++DV + + + +P D
Sbjct: 262 SRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVD 321
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 305 LNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 364
+++ T + C + ++ + + + D WS+G ++Y +L G PF ++ + D
Sbjct: 172 IHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 365 KIL 367
KIL
Sbjct: 232 KIL 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 139/243 (57%), Gaps = 10/243 (4%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQH 67
Y + + +G G F +V+L H + + A+K++ K + D E + + +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
+ +LF + +++MV+EY PGG+L+ +++ + EK ++ + +++ A+ +H +G
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK---GKQY 184
HRD+KP+N+LLD++ +LKL DFG C K + T+ G+P+Y +PEV+K G Y
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGY 255
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK----YTEPPWMSPNSRQIVR 240
YG E D WS+GV L+ +L G PF +DS+ Y KI++ K + E +S +++ ++
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLIC 315
Query: 241 SML 243
+ L
Sbjct: 316 AFL 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 323 RKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMPIC 374
+ + G YYG E D WS+GV L+ +L G PF +DS+ Y KI+ H +C
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLC 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK----YTEPPWMSPNSRQIV 468
YYG E D WS+GV L+ +L G PF +DS+ Y KI++ K + E +S +++ ++
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLI 314
Query: 469 RSML 472
+ L
Sbjct: 315 CAFL 318
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 177
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 178 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 236
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 237 SRLLKHNPSQRPMLREVLEHPWI 259
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 241
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 242 HNPSQRPMLREVLEHPWI 259
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 11/272 (4%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINAL 60
+K+ + + Y + +G+G F V T TG A K + D V+ EI +
Sbjct: 44 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTM 102
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAV 119
+ H + L E + + M+ E+ GGEL + + E ++ E E+ + RQ+ +
Sbjct: 103 SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 162
Query: 120 AYLHHLGYAHRDLKPENVLL--DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
++H Y H DLKPEN++ R+ LKLIDFGL A + + ++ + G+ +AAPE
Sbjct: 163 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--KQSVKVTTGTAEFAAPE 220
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI----LNGKYTEPPWMSP 233
V +GK G TD+WS+GV+ Y LL G PF ++ D+ + N + +S
Sbjct: 221 VAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 279
Query: 234 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ + +R +L +P R+ I L H W+ G
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI----LNGKYTEPPWMSPNSRQIVRS 470
G TD+WS+GV+ Y LL G PF ++ D+ + N + +S + + +R
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMG 494
+L +P R+ I L H W+ G
Sbjct: 288 LLLADPNTRMTIHQALEHPWLTPG 311
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
G TD+WS+GV+ Y LL G PF ++ D+ + S
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 181
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 182 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRDTLCGTLDYLPPEMI 179
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 180 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 182
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 183 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 241
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 242 SRLLKHNPSQRPMLREVLEHPWI 264
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 476
+ D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 249
Query: 477 GKRIKIQDLLGHNWV 491
+R ++++L H W+
Sbjct: 250 SQRPMLREVLEHPWI 264
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 139/251 (55%), Gaps = 6/251 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA + +A+K++ KA L + +++ E+ H+ H +I +L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ ++ +++++EY P G + + + + E+ + + ++ +A++Y H HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG ++L CG+ +Y PE+I+G+ + + D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTEL---CGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P +R
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 252 KIQDLLGHNWV 262
++++L H W+
Sbjct: 250 MLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + + C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 151 DFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 211 YQETYKRI 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 181
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 182 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 144/264 (54%), Gaps = 11/264 (4%)
Query: 6 LRNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEIN 58
++ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 1 MKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEV 178
++Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPPEM 177
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQI 238
I+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R +
Sbjct: 178 IEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWV 262
+ +L+ P +R ++++L H W+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 151 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 211 YQETYKRI 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 139/251 (55%), Gaps = 6/251 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA + +A+K++ KA L + +++ E+ H+ H +I +L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ ++ +++++EY P G + + + + E+ + + ++ +A++Y H HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I+G+ + + D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P +R
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 252 KIQDLLGHNWV 262
++++L H W+
Sbjct: 250 MLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 19 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 78
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 195
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 196 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 254
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWI 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 259
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 260 HNPSQRPMLREVLEHPWI 277
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMI 183
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 184 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 11/272 (4%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINAL 60
+K+ + + Y + +G+G F V T TG A K + D V+ EI +
Sbjct: 150 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTM 208
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAV 119
+ H + L E + + M+ E+ GGEL + + E ++ E E+ + RQ+ +
Sbjct: 209 SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268
Query: 120 AYLHHLGYAHRDLKPENVLL--DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
++H Y H DLKPEN++ R+ LKLIDFGL A + + ++ + G+ +AAPE
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD--PKQSVKVTTGTAEFAAPE 326
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI----LNGKYTEPPWMSP 233
V +GK G TD+WS+GV+ Y LL G PF ++ D+ + N + +S
Sbjct: 327 VAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385
Query: 234 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ + +R +L +P R+ I L H W+ G
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI----LNGKYTEPPWMSPNSRQIVRS 470
G TD+WS+GV+ Y LL G PF ++ D+ + N + +S + + +R
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Query: 471 MLQVEPGKRIKIQDLLGHNWVKMG 494
+L +P R+ I L H W+ G
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPG 417
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
G TD+WS+GV+ Y LL G PF ++ D+ + S
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 28 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCGTLDYLPPEMI 204
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 205 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWI 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 268
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 269 HNPSQRPMLREVLEHPWI 286
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 145/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ + G+ Y +PE++ K S +
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTEKSACKS-S 212
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 272
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 273 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 271
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 272 KRLGCEEMEGYGPLKAHP 289
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSACKS- 211
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 212 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+I
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPPEMI 179
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 180 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 152 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 212 YQETYKRI 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPPEMI 178
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 179 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 151 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 211 YQETYKRI 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 145/267 (54%), Gaps = 11/267 (4%)
Query: 3 YIDLRNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKL 55
++ + Q+ LE R +G G F V LA + +A+K++ KA L + +++
Sbjct: 3 HMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 56 EINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQI 115
E+ H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
+A++Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLP 179
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 235
PE+I+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +
Sbjct: 180 PEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 236 RQIVRSMLQVEPGKRIKIQDLLGHNWV 262
R ++ +L+ P +R ++++L H W+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWI 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 156 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 216 YQETYKRI 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG S+ T CG+ +Y PE I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEXI 183
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 184 EGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWI 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 248 HNPSQRPXLREVLEHPWI 265
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ S+ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+I
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMI 178
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ Y +I ++T P +++ +R ++
Sbjct: 179 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLI 237
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 47/78 (60%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ Y +I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMI 178
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 179 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG + L CG+ +Y PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL---CGTLDYLPPEMI 178
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 179 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 476
+ D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 477 GKRIKIQDLLGHNWV 491
+R ++++L H W+
Sbjct: 246 SQRPMLREVLEHPWI 260
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 138/251 (54%), Gaps = 6/251 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA +A+K++ KA L + +++ E+ H+ H +I +L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ ++ +++++EY P G + + + + E+ + + ++ +A++Y H HRD
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG S+ T CG+ +Y PE+I+G+ + + D+
Sbjct: 131 IKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 186
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P +R
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 246
Query: 252 KIQDLLGHNWV 262
++++L H W+
Sbjct: 247 MLREVLEHPWI 257
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 239
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 240 HNPSQRPMLREVLEHPWI 257
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 212
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 272
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 273 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 271
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 272 KRLGCEEMEGYGPLKAHP 289
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 211
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 212 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 132
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 133 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 190
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 250
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 251 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 190 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 249
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 250 KRLGCEEMEGYGPLKAHP 267
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 189
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 190 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 133
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 191
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 252 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 191 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 250
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 251 KRLGCEEMEGYGPLKAHP 268
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 190
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 191 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 138/251 (54%), Gaps = 6/251 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA + +A+K++ KA L + +++ E+ H+ H +I +L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ ++ +++++EY P G + + + + E+ + + ++ +A++Y H HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG + L CG+ +Y PE+I+G+ + + D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P +R
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 252 KIQDLLGHNWV 262
++++L H W+
Sbjct: 253 MLREVLEHPWI 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP 476
+ D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 477 GKRIKIQDLLGHNWV 491
+R ++++L H W+
Sbjct: 249 SQRPMLREVLEHPWI 263
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 135
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 136 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 193
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 253
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 254 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 282
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 193 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 252
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 253 KRLGCEEMEGYGPLKAHP 270
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 192
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 193 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG L CG+ +Y PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEMI 181
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 182 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 4 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG L CG+ +Y PE+I
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEMI 180
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 181 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 245 HNPSQRPMLREVLEHPWI 262
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ +FG S+ T CG+ +Y PE+I
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS---SRRTTLCGTLDYLPPEMI 181
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 182 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 139
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 197
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 257
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 258 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 197 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 256
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 257 KRLGCEEMEGYGPLKAHP 274
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 196
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 197 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSAXKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSAXKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 134
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 135 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 192
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 252
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 253 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 192 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 251
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 252 KRLGCEEMEGYGPLKAHP 269
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 191
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 192 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG L CG+ +Y PE+I
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEMI 178
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 179 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 28 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG L CG+ +Y PE+I
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMI 204
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 205 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWI 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 268
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 269 HNPSQRPMLREVLEHPWI 286
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 177 DFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 237 YQETYKRI 244
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 4 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ +FG S+ T CG+ +Y PE+I
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS---SRRTTLCGTLDYLPPEMI 180
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 181 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 245 HNPSQRPMLREVLEHPWI 262
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 145/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ + G+ Y +PE++ K S +
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTEKSACKS-S 216
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 276
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 277 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 305
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 275
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 276 KRLGCEEMEGYGPLKAHP 293
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSACKS- 215
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 216 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 153/294 (52%), Gaps = 29/294 (9%)
Query: 8 NQYILERTVGSGGFAKVKLATHVL---TGEKVAIKIMKKATL---GEDLPRVKLEINALK 61
+ L + +G+G + KV L + TG+ A+K++KKAT+ + + E L+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 62 HISHQ-HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
HI + L +T + + ++++Y GGEL H+ +R+R E E + + +I+ A+
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+LH LG +RD+K EN+LLD N ++ L DFGL + + CG+ Y AP++++
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 233
Query: 181 GKQY-YGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPW---MS 232
G + D WS+GV++Y LL G PF D S ++ +IL +EPP+ MS
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK---SEPPYPQEMS 290
Query: 233 PNSRQIVRSMLQVEPGKRI--------KIQDLLGH---NWVKMGPEDNPVSFRP 275
++ +++ +L +P KR+ +I++ L NW + + P F+P
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKP 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 419 DVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPW---MSPNSRQIVRSM 471
D WS+GV++Y LL G PF D S ++ +IL +EPP+ MS ++ +++ +
Sbjct: 244 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK---SEPPYPQEMSALAKDLIQRL 300
Query: 472 LQVEPGKRI 480
L +P KR+
Sbjct: 301 LMKDPKKRL 309
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 306 NEWTYNYDTCTYLLLLSRK--KQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
+E YD C + ++ + G + D WS+GV++Y LL G PF D
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 137/251 (54%), Gaps = 6/251 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA + +A+K++ KA L + +++ E+ H+ H +I +L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ ++ +++++EY P G + + + + E+ + + ++ +A++Y H HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG L CG+ +Y PE+I+G+ + + D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+ P +R
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 252 KIQDLLGHNWV 262
++++L H W+
Sbjct: 253 MLREVLEHPWI 263
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 299 DDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
D WS + D C L L + + + + D+WS+GV+ Y L G PF++++
Sbjct: 154 DFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 359 IDQLYDKI 366
+ Y +I
Sbjct: 214 YQETYKRI 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 143/264 (54%), Gaps = 17/264 (6%)
Query: 10 YILERT--VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQH 67
Y + +T +G G F +V TG K+A KI+K + +D VK EI+ + + H +
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHAN 147
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ +L+ E+ + I +V+EY GGEL D I+ E L E ++ F +QI + ++H +
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 127 YAHRDLKPENVL-LDRN-QNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGK 182
H DLKPEN+L ++R+ + +K+IDFGL KP +L+ + G+P + APEV+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP----REKLKVNFGTPEFLAPEVV-NY 262
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY----TEPPWMSPNSRQI 238
+ TD+WS+GV+ Y LL G PF D+ + + IL ++ E +S +++
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWV 262
+ +L E RI + L H W+
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWL 346
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY----TEPPWMSPNSRQIVRSMLQ 473
TD+WS+GV+ Y LL G PF D+ + + IL ++ E +S +++ + +L
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI 328
Query: 474 VEPGKRIKIQDLLGHNWV 491
E RI + L H W+
Sbjct: 329 KEKSWRISASEALKHPWL 346
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 335 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
TD+WS+GV+ Y LL G PF D+ + + IL+
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA 302
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANAFVGTAQYVSPELLTEKSACKS-S 213
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 274 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 273 KRLGCEEMEGYGPLKAHP 290
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV---GTAQYVSPELLTEKSACKS- 212
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 213 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 160
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 218
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATK 278
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 279 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 218 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDAT 277
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 278 KRLGCEEMEGYGPLKAHP 295
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 217
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 218 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 250
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 145/264 (54%), Gaps = 13/264 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P G + + + + E+ + + ++ +A+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL-CAKPEGGLESQLQTSCGSPNYAAPEV 178
+Y H HRD+KPEN+LL LK+ DFG C P S+ T G+ +Y PE+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLSGTLDYLPPEM 178
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQI 238
I+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R +
Sbjct: 179 IEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 237
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWV 262
+ +L+ P +R ++++L H W+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWI 261
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 405 CSAPSSKQYYGSET------------------DVWSMGVMLYALLCGFLPFDSDSIDQLY 446
C APSS++ S T D+WS+GV+ Y L G PF++++ + Y
Sbjct: 157 CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 447 DKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
+I ++T P +++ +R ++ +L+ P +R ++++L H W+
Sbjct: 217 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 274 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 273 KRLGCEEMEGYGPLKAHP 290
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 212
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 213 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 274 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 273 KRLGCEEMEGYGPLKAHP 290
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 212
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 213 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 182
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 236
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQ 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 242
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 243 LALRPSDRPTFEEIQNHPWMQ 263
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 216
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 276
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 277 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 305
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 275
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 276 KRLGCEEMEGYGPLKAHP 293
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 215
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 216 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 7 RNQYILE-----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINA 59
+ Q+ LE R +G G F V LA + +A+K++ KA L + +++ E+
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H+ H +I +L+ ++ +++++EY P GE+ + + + E+ + + ++ +A+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
+Y H HRD+KPEN+LL LK+ DFG L G+ +Y PE+I
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX---GTLDYLPPEMI 183
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
+G+ + + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++
Sbjct: 184 EGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 240 RSMLQVEPGKRIKIQDLLGHNWV 262
+L+ P +R ++++L H W+
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+WS+GV+ Y L G PF++++ + Y +I ++T P +++ +R ++ +L+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 474 VEPGKRIKIQDLLGHNWV 491
P +R ++++L H W+
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+ + D+WS+GV+ Y L G PF++++ + Y +I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 162
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 163 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 220
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 280
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 281 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 220 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 279
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 280 KRLGCEEMEGYGPLKAHP 297
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 219
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 220 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 61 KHIS--HQHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 178
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQ 232
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRWC 238
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQ 259
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 61 KHIS--HQHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 181
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 235
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPWMQ 262
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 241
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 242 LALRPSDRPTFEEIQNHPWMQ 262
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 182
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 236
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQ 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 242
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 243 LALRPSDRPTFEEIQNHPWMQ 263
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 183
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 237
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 244 LALRPSDRPTFEEIQNHPWMQ 264
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 61 KHIS--HQHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 178
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 232
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 238
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQ 259
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 61 KHIS--HQHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 178
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 232
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 238
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQ 259
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 183
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 237
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 244 LALRPSDRPTFEEIQNHPWMQ 264
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 197
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 251
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPWMQ 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 257
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 258 LALRPSDRPTFEEIQNHPWMQ 278
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 183
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 237
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 244 LALRPSDRPTFEEIQNHPWMQ 264
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 142/277 (51%), Gaps = 24/277 (8%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGE-KVAIKIM-KKATLG----EDLPRVKLEINALKH 62
+Y L +G GGF V A H LT +VAIK++ + LG D LE+ L
Sbjct: 32 EYRLGPLLGKGGFGTV-FAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 63 IS----HQHICKLFQVIETSSHIFMVIEY-CPGGELLDHIVERQRLGEKESRAFFRQILS 117
+ H + +L ET +V+E P +L D+I E+ LGE SR FF Q+++
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA 150
Query: 118 AVAYLHHLGYAHRDLKPENVLLD-RNQNLKLIDFGLCAKPEGGLESQLQTSC-GSPNYAA 175
A+ + H G HRD+K EN+L+D R KLIDFG A L + T G+ Y+
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL----LHDEPYTDFDGTRVYSP 206
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 235
PE I QY+ VWS+G++LY ++CG +PF+ D +IL + P +SP+
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFPAHVSPDC 260
Query: 236 RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
++R L +P R ++++L W++ ED P++
Sbjct: 261 CALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLN 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 468
S QY+ VWS+G++LY ++CG +PF+ D +IL + P +SP+ ++
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFPAHVSPDCCALI 264
Query: 469 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPL 500
R L +P R ++++L W++ ED PL
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDVPL 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKILSHFMPICTILISQ 380
QY+ VWS+G++LY ++CG +PF+ D I + +H P C LI +
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRR 266
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 197
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 251
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPWMQ 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 257
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 258 LALRPSDRPTFEEIQNHPWMQ 278
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 210
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQ 264
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRWC 270
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 271 LALRPSDRPTFEEIQNHPWMQ 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 211
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQ 265
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQ 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRWC 271
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 272 LALRPSDRPTFEEIQNHPWMQ 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 210
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQ 264
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRWC 270
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 271 LALRPSDRPTFEEIQNHPWMQ 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y GELL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ G+ Y +PE++ K S +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 273
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 274 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 273 KRLGCEEMEGYGPLKAHP 290
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS- 212
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 213 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 211
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQ 265
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQ 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRWC 271
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 272 LALRPSDRPTFEEIQNHPWMQ 292
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 198
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 252
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPWMQ 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 258
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 259 LALRPSDRPTFEEIQNHPWMQ 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 210
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 264
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 270
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 271 LALRPSDRPTFEEIQNHPWMQ 291
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 225
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 279
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQ 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 285
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 286 LALRPSDRPTFEEIQNHPWMQ 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 225
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 279
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQ 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 285
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 286 LALRPSDRPTFEEIQNHPWMQ 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 211
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQ 265
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQ 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQHLIRWC 271
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 272 LALRPSDRPTFEEIQNHPWMQ 292
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 210
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQ 264
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQHLIRWC 270
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 271 LALRPSDRPTFEEIQNHPWMQ 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 217
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQ 271
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPWMQ 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 277
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 278 LALRPSDRPTFEEIQNHPWMQ 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 211
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQ 265
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQ 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSXECQHLIRWC 271
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 272 LALRPSDRPTFEEIQNHPWMQ 292
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 198
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 252
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPWMQ 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 258
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 259 LALRPSDRPTFEEIQNHPWMQ 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 61 KHIS--HQHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 205
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 259
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 260 HLIRWCLALRPSDRPTFEEIQNHPWMQ 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 265
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 266 LALRPSDRPTFEEIQNHPWMQ 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 230
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 284
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 285 HLIRWCLALRPSDRPTFEEIQNHPWMQ 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 290
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 291 LALRPSDRPTFEEIQNHPWMQ 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLP---RVKLEINAL 60
L +QY + +GSGGF V V VAIK ++K + + +LP RV +E+ L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 61 KHISH--QHICKLFQVIETSSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILS 117
K +S + +L E +++E P +L D I ER L E+ +R+FF Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
AV + H+ G HRD+K EN+L+D N+ LKLIDFG A + + + G+ Y+ P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPP 198
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR 236
E I+ +Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S +
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQ 252
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++R L + P R +++ H W++
Sbjct: 253 HLIRWCLALRPXDRPTFEEIQNHPWMQ 279
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWC 258
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 259 LALRPXDRPTFEEIQNHPWMQ 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 118
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 235
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 299
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 300 MLIRNLLKTEPTQRMTITEFMNHPWI 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 78
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 195
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 255
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 200 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 259
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 260 MLIRNLLKTEPTQRMTITEFMNHPWI 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 226
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 73
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 190
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 250
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 195 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 254
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 255 MLIRNLLKTEPTQRMTITEFMNHPWI 280
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 79
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 196
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 256
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 201 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 260
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 261 MLIRNLLKTEPTQRMTITEFMNHPWI 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 227
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 124
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 241
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 301
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 305
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 306 MLIRNLLKTEPTQRMTITEFMNHPWI 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 272
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 74
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 191
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 255
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 256 MLIRNLLKTEPTQRMTITEFMNHPWI 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 72
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 189
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 249
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 254 MLIRNLLKTEPTQRMTITEFMNHPWI 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 74
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 191
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 255
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 256 MLIRNLLKTEPTQRMTITEFMNHPWI 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 80
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 197
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 257
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 202 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 261
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 262 MLIRNLLKTEPTQRMTITEFMNHPWI 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
+ +G G F+ V LA + T + AIKI++K + ++ +P V E + + + H KL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + ++ + Y G LL +I + E +R + +I+SA+ YLH G HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 132 LKPENVLLDRNQNLKLIDFGLCA--KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
LKPEN+LL+ + ++++ DFG PE +++ + G+ Y +PE++ K S +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTEKSASKS-S 215
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++ K
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275
Query: 250 RIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
R+ +++ G+ +K P V++ H+
Sbjct: 276 RLGCEEMEGYGPLKAHPFFESVTWENLHQ 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 477
+D+W++G ++Y L+ G PF + + ++ KI+ +Y P P +R +V +L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
Query: 478 KRIKIQDLLGHNWVKMGP 495
KR+ +++ G+ +K P
Sbjct: 275 KRLGCEEMEGYGPLKAHP 292
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 274 RPDHELREKDDDV-IKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLL--LLSRKKQGKQY 330
+P++ L +D + I K LSP+ ++ N + T Y+ LL+ K K
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSASKS- 214
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+D+W++G ++Y L+ G PF + + ++ KI+
Sbjct: 215 ----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 129/241 (53%), Gaps = 7/241 (2%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQ-HICKL 71
+G G F KV LA T E AIKI+KK + +D+ +E L + + +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+T ++ V+EY GG+L+ HI + + E ++ + +I + +LH G +RD
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKP-EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETD 190
LK +NV+LD ++K+ DFG+C + G+ + + CG+P+Y APE+I Q YG D
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT--REFCGTPDYIAPEII-AYQPYGKSVD 202
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
W+ GV+LY +L G PFD + D+L+ I+ + P +S + I + ++ P KR
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKR 262
Query: 251 I 251
+
Sbjct: 263 L 263
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
Q YG D W+ GV+LY +L G PFD + D+L+ I+ + P +S + I + +
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGL 254
Query: 472 LQVEPGKRI 480
+ P KR+
Sbjct: 255 MTKHPAKRL 263
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
Q YG D W+ GV+LY +L G PFD + D+L+ I+ H
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH 235
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 88
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 89 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 205
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 265
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 269
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 270 MLIRNLLKTEPTQRMTITEFMNHPWI 295
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 43/290 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQV 74
+G G +AKV+ A + G++ A+KI++K G RV E+ L +++I +L +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQA-GHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
E + ++V E GG +L HI +++ E+E+ R + +A+ +LH G AHRDLKP
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKP 139
Query: 135 ENVLLDRNQN---LKLIDFGLCAKPEGGLE----------SQLQTSCGSPNYAAPEVIK- 180
EN+L + + +K+ DF L + G++ +L T CGS Y APEV++
Sbjct: 140 ENILCESPEKVSPVKICDFDLGS----GMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 181 ---GKQYYGSETDVWSMGVMLYALLCGFLPF----------DSDSI-----DQLYDKILN 222
+Y D+WS+GV+LY +L G+ PF D + ++L++ I
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 255
Query: 223 GKYTEP--PW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK-MGPE 267
GKY P W +S ++ ++ +L + +R+ +L H WV+ PE
Sbjct: 256 GKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPF----------DSDSI-----DQLYDKILNGKYTEP 457
+Y D+WS+GV+LY +L G+ PF D + ++L++ I GKY P
Sbjct: 202 FYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP 261
Query: 458 --PW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK-MGPE 496
W +S ++ ++ +L + +R+ +L H WV+ PE
Sbjct: 262 DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 330 YYGSETDVWSMGVMLYALLCGFLPF 354
+Y D+WS+GV+LY +L G+ PF
Sbjct: 202 FYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 9/242 (3%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED----LPRVKLEINALKHISHQHICK 70
+G G F KV L+ T E A+KI+KK + +D V+ + AL + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 85
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +T ++ V+EY GG+L+ HI + R E + + +I + +L G +R
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPE-GGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
DLK +NV+LD ++K+ DFG+C + G+ + + CG+P+Y APE+I Q YG
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPEII-AYQPYGKSV 202
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK 249
D W+ GV+LY +L G PF+ + D+L+ I+ P MS + I + ++ PGK
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK 262
Query: 250 RI 251
R+
Sbjct: 263 RL 264
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
Q YG D W+ GV+LY +L G PF+ + D+L+ I+ P MS + I + +
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL 255
Query: 472 LQVEPGKRI 480
+ PGKR+
Sbjct: 256 MTKHPGKRL 264
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
Q YG D W+ GV+LY +L G PF+ + D+L+ I+ H
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 236
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 72
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L C +P Y APEV+
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVL- 189
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
G + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 249
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MSPNSR 465
Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R+ I + + H W+
Sbjct: 254 MLIRNLLKTEPTQRMTITEFMNHPWI 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 11/243 (4%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED----LPRVKLEINALKHISHQHICK 70
+G G F KV L+ T E A+KI+KK + +D V+ + AL + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 406
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
L +T ++ V+EY GG+L+ HI + R E + + +I + +L G +R
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGSE 188
DLK +NV+LD ++K+ DFG+C + + + T CG+P+Y APE+I Q YG
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCGTPDYIAPEII-AYQPYGKS 522
Query: 189 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 248
D W+ GV+LY +L G PF+ + D+L+ I+ P MS + I + ++ PG
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPG 582
Query: 249 KRI 251
KR+
Sbjct: 583 KRL 585
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
Q YG D W+ GV+LY +L G PF+ + D+L+ I+ P MS + I + +
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL 576
Query: 472 LQVEPGKRI 480
+ PGKR+
Sbjct: 577 MTKHPGKRL 585
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
Q YG D W+ GV+LY +L G PF+ + D+L+ I+ H
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 557
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 18/256 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-------LPRVKLEINALKHISHQHI 68
+GSG F V A ++V +K +KK + ED L +V LEI L + H +I
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 69 CKLFQVIETSSHIFMVIE-YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K+ + E +V+E + G +L I RL E + FRQ++SAV YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI 151
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+K EN+++ + +KLIDFG A E G T CG+ Y APEV+ G Y G
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTFCGTIEYCAPEVLMGNPYRGP 209
Query: 188 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIVRSMLQVE 246
E ++WS+GV LY L+ F+ + +L + + + PP++ S +V +LQ
Sbjct: 210 ELEMWSLGVTLYTLV-----FEENPFCELEETVEAAIH--PPYLVSKELMSLVSGLLQPV 262
Query: 247 PGKRIKIQDLLGHNWV 262
P +R ++ L+ WV
Sbjct: 263 PERRTTLEKLVTDPWV 278
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIVRSM 471
Y G E ++WS+GV LY L+ F+ + +L + + + PP++ S +V +
Sbjct: 206 YRGPELEMWSLGVTLYTLV-----FEENPFCELEETVEAAIH--PPYLVSKELMSLVSGL 258
Query: 472 LQVEPGKRIKIQDLLGHNWV 491
LQ P +R ++ L+ WV
Sbjct: 259 LQPVPERRTTLEKLVTDPWV 278
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPF 354
G Y G E ++WS+GV LY L+ PF
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 137/249 (55%), Gaps = 12/249 (4%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHIS 64
R + + + +G G F +V + + A+KI+ K + + + E + L +
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD 132
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLH 123
+ I L + +++++V++Y GG+LL + + RL E+ +R + +++ A+ +H
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK--- 180
L Y HRD+KP+N+L+D N +++L DFG C K Q + G+P+Y +PE+++
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 181 -GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-----TEPPWMSPN 234
GK YG E D WS+GV +Y +L G PF ++S+ + Y KI+N K T+ +S N
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
Query: 235 SRQIVRSML 243
++ ++R ++
Sbjct: 313 AKDLIRRLI 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 403 VLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-----TEP 457
+L + K YG E D WS+GV +Y +L G PF ++S+ + Y KI+N K T+
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV 306
Query: 458 PWMSPNSRQIVRSML 472
+S N++ ++R ++
Sbjct: 307 TDVSENAKDLIRRLI 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 320 LLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+L + GK YG E D WS+GV +Y +L G PF ++S+ + Y KI++H
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K + +D P+ + E+ S HI
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKXL------QDCPKARREVELHWRASQCPHIV 118
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG E + L T C +P Y APEV+
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL- 235
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY----DKILNGKYT--EPPW--MS 232
G + Y D WS+GV+ Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVS 295
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R I + H W+
Sbjct: 296 EEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY----DKILNGKYT--EPPW--MSPNSR 465
Y D WS+GV+ Y LLCG+ PF S+ + +I G+Y P W +S +
Sbjct: 240 YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVK 299
Query: 466 QIVRSMLQVEPGKRIKIQDLLGHNWV 491
++R++L+ EP +R I + H W+
Sbjct: 300 XLIRNLLKTEPTQRXTITEFXNHPWI 325
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
G + Y D WS+GV+ Y LLCG+ PF S+
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSN 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 122/223 (54%), Gaps = 7/223 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHIS 64
R + + + +G G F +V + T A+KI+ K + + + E + L +
Sbjct: 73 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGD 132
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLH 123
Q I L + +H+++V++Y GG+LL + + +L E +R + +++ A+ +H
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK--- 180
L Y HRD+KP+NVLLD N +++L DFG C K Q + G+P+Y +PE+++
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 181 -GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN 222
G YG E D WS+GV +Y +L G PF ++S+ + Y KI+N
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 320 LLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+L + G YG E D WS+GV +Y +L G PF ++S+ + Y KI++H
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN 451
YG E D WS+GV +Y +L G PF ++S+ + Y KI+N
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 122/223 (54%), Gaps = 7/223 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHIS 64
R + + + +G G F +V + T A+KI+ K + + + E + L +
Sbjct: 89 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGD 148
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLH 123
Q I L + +H+++V++Y GG+LL + + +L E +R + +++ A+ +H
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK--- 180
L Y HRD+KP+NVLLD N +++L DFG C K Q + G+P+Y +PE+++
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 181 -GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN 222
G YG E D WS+GV +Y +L G PF ++S+ + Y KI+N
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 320 LLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSH 369
+L + G YG E D WS+GV +Y +L G PF ++S+ + Y KI++H
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN 451
YG E D WS+GV +Y +L G PF ++S+ + Y KI+N
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 35/291 (12%)
Query: 13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKL 71
E +G G A+V+ +++T ++ A+KI++K G RV E+ L H+++ +L
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ E ++V E GG +L HI +R+ E E+ + + SA+ +LH+ G AHRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 132 LKPENVLLDR-NQ--NLKLIDFGLCA--KPEGGLE----SQLQTSCGSPNYAAPEVIKG- 181
LKPEN+L + NQ +K+ DFGL + K G +L T CGS Y APEV++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 182 ---KQYYGSETDVWSMGVMLYALLCGFLPF----DSD-----------SIDQLYDKILNG 223
Y D+WS+GV+LY LL G+ PF SD + L++ I G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 224 KYTEP--PW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK-MGPEDN 269
KY P W +S ++ ++ +L + +R+ +L H WV+ PE+
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 383 PTILLPCKVGQVINLLRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPF----D 438
P +L PC + + + V+ + Y D+WS+GV+LY LL G+ PF
Sbjct: 176 PELLTPCGSAEYM----APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
Query: 439 SD-----------SIDQLYDKILNGKYTEP--PW--MSPNSRQIVRSMLQVEPGKRIKIQ 483
SD + L++ I GKY P W +S ++ ++ +L + +R+
Sbjct: 232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 484 DLLGHNWVKMGPEDNPL 500
+L H WV+ +N L
Sbjct: 292 QVLQHPWVQGCAPENTL 308
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
Y D+WS+GV+LY LL G+ PF
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 33/286 (11%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--------------------G 47
NQY L+ +G G + VKLA + A+K++ K L G
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 48 EDLPR-----VKLEINALKHISHQHICKLFQVIE--TSSHIFMVIEYCPGGELLDHIVER 100
PR V EI LK + H ++ KL +V++ H++MV E G +++ +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTL 131
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL 160
+ L E ++R +F+ ++ + YLH+ HRD+KP N+L+ + ++K+ DFG+ + +G
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS- 190
Query: 161 ESQLQTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD 218
++ L + G+P + APE + K + G DVW+MGV LY + G PF + I L+
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS 250
Query: 219 KILNG--KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
KI + ++ + P ++ + + ++ ML P RI + ++ H WV
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+ K + G DVW+MGV LY + G PF + I L+ KI + ++ + P ++ + +
Sbjct: 212 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD 271
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
++ ML P RI + ++ H WV
Sbjct: 272 LITRMLDKNPESRIVVPEIKLHPWV 296
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 314 TCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFM 371
T ++ S + K + G DVW+MGV LY + G PF + I L+ KI S +
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 12/260 (4%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
ILE +GSG F V TG K + D VK EI+ + + H +
Sbjct: 55 ILEE-LGSGAFGVVHRCVEKATGRVFVAKFIN-TPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
L E + +++E+ GGEL D I E ++ E E + RQ + ++H H
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 130 RDLKPENVLLD--RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
D+KPEN++ + + ++K+IDFGL K + ++ + + +AAPE++ ++ G
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIV-DREPVGF 229
Query: 188 ETDVWSMGVMLYALLCGFLPF-DSDSIDQLYD-KILNGKYTEPPW--MSPNSRQIVRSML 243
TD+W++GV+ Y LL G PF D ++ L + K + ++ E + +SP ++ ++++L
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLL 289
Query: 244 QVEPGKRIKIQDLLGHNWVK 263
Q EP KR+ + D L H W+K
Sbjct: 290 QKEPRKRLTVHDALEHPWLK 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 398 LRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYD-KILNGK 453
+ +A +AP ++ G TD+W++GV+ Y LL G PF D ++ L + K + +
Sbjct: 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE 268
Query: 454 YTEPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ E + +SP ++ ++++LQ EP KR+ + D L H W+K
Sbjct: 269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 332 GSETDVWSMGVMLYALLCGFLPF 354
G TD+W++GV+ Y LL G PF
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 35/291 (12%)
Query: 13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKL 71
E +G G A+V+ +++T ++ A+KI++K G RV E+ L H+++ +L
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ E ++V E GG +L HI +R+ E E+ + + SA+ +LH+ G AHRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 132 LKPENVLLDR-NQ--NLKLIDFGLCA--KPEGGLE----SQLQTSCGSPNYAAPEVIKG- 181
LKPEN+L + NQ +K+ DF L + K G +L T CGS Y APEV++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 182 ---KQYYGSETDVWSMGVMLYALLCGFLPF----DSD-----------SIDQLYDKILNG 223
Y D+WS+GV+LY LL G+ PF SD + L++ I G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 224 KYTEP--PW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK-MGPEDN 269
KY P W +S ++ ++ +L + +R+ +L H WV+ PE+
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 383 PTILLPCKVGQVINLLRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPF----D 438
P +L PC + + + V+ + Y D+WS+GV+LY LL G+ PF
Sbjct: 176 PELLTPCGSAEYM----APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
Query: 439 SD-----------SIDQLYDKILNGKYTEP--PW--MSPNSRQIVRSMLQVEPGKRIKIQ 483
SD + L++ I GKY P W +S ++ ++ +L + +R+
Sbjct: 232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 484 DLLGHNWVKMGPEDNPL 500
+L H WV+ +N L
Sbjct: 292 QVLQHPWVQGCAPENTL 308
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
Y D+WS+GV+LY LL G+ PF
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 149/304 (49%), Gaps = 23/304 (7%)
Query: 5 DLRNQYIL-ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKH 62
+ N YIL + +G G FA V+ TG++ A K +KK G+D + EI L+
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLEL 84
Query: 63 I-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAV 119
S + L +V E +S I +++EY GGE+ + + + E + +QIL V
Sbjct: 85 AKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGV 144
Query: 120 AYLHHLGYAHRDLKPENVLLDRN---QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
YLH H DLKP+N+LL ++K++DFG+ K G +L+ G+P Y AP
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAP 202
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSPN 234
E++ + TD+W++G++ Y LL PF + + Y I +N Y+E + S +
Sbjct: 203 EILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS 261
Query: 235 --SRQIVRSMLQVEPGKRIKIQDLLGHNWVK-------MGPEDNPVSFRP-DHELREKDD 284
+ ++S+L P KR + L H+W++ PE+ S + DH +R +D
Sbjct: 262 QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSED 321
Query: 285 DVIK 288
K
Sbjct: 322 KTSK 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 416 SETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI--LNGKYTEPPWMSPN--SRQIVRSM 471
+ TD+W++G++ Y LL PF + + Y I +N Y+E + S + + ++S+
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL 271
Query: 472 LQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVIKVMADHKQLSPDDMWSQ 525
L P KR + L H+W++ +N ++ DH S +D S+
Sbjct: 272 LVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSK 325
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 130/237 (54%), Gaps = 18/237 (7%)
Query: 36 VAIKIMKKATLGE--DLP---RVKLEINALKHISH--QHICKLFQVIETSSHIFMVIEYC 88
VAIK ++K + + +LP RV +E+ LK +S + +L E +++E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 89 -PGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-LK 146
P +L D I ER L E+ +R+FF Q+L AV + H+ G HRD+K EN+L+D N+ LK
Sbjct: 139 EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 198
Query: 147 LIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFL 206
LIDFG A + + + G+ Y+ PE I+ +Y+G VWS+G++LY ++CG +
Sbjct: 199 LIDFGSGALLKDTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 207 PFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
PF+ D ++I+ G+ +S + ++R L + P R +++ H W++
Sbjct: 256 PFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 471
+Y+G VWS+G++LY ++CG +PF+ D ++I+ G+ +S + ++R
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWC 285
Query: 472 LQVEPGKRIKIQDLLGHNWVK 492
L + P R +++ H W++
Sbjct: 286 LALRPSDRPTFEEIQNHPWMQ 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPFDSD 357
+Y+G VWS+G++LY ++CG +PF+ D
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 128/228 (56%), Gaps = 11/228 (4%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL---GEDLPRVKLEINALKHI 63
R+ + + + +G G F++V + TG+ A+KIM K + GE + + E + L +
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGE-VSCFREERDVLVNG 118
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYL 122
+ I +L + +++++V+EY GG+LL + + +R+ + +R + +I+ A+ +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG- 181
H LGY HRD+KP+N+LLDR +++L DFG C K + + G+P+Y +PE+++
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 182 -----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 224
YG E D W++GV Y + G PF +DS + Y KI++ K
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 417 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 453
E D W++GV Y + G PF +DS + Y KI++ K
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 334 ETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMPICTILISQYFP 383
E D W++GV Y + G PF +DS + Y KI+ + + L+ + P
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP 299
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 6/252 (2%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKL 71
R +G G F V LA + VA+K++ K+ + ++ +++ EI H+ H +I +L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ I++++EY P GEL + + E+ + ++ A+ Y H HRD
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRD 148
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KPEN+LL LK+ DFG + +T CG+ +Y PE+I+G+ + + D+
Sbjct: 149 IKPENLLLGLKGELKIADFGWSVHAPS---LRRKTMCGTLDYLPPEMIEGRM-HNEKVDL 204
Query: 192 WSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI 251
W +GV+ Y LL G PF+S S ++ Y +I+ P + ++ ++ +L+ P +R+
Sbjct: 205 WCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERL 264
Query: 252 KIQDLLGHNWVK 263
+ + H WV+
Sbjct: 265 PLAQVSAHPWVR 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ 473
+ + D+W +GV+ Y LL G PF+S S ++ Y +I+ P + ++ ++ +L+
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLR 257
Query: 474 VEPGKRIKIQDLLGHNWVK 492
P +R+ + + H WV+
Sbjct: 258 HNPSERLPLAQVSAHPWVR 276
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL 367
+ + D+W +GV+ Y LL G PF+S S ++ Y +I+
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 134/252 (53%), Gaps = 11/252 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V LA +G +VA+K+M +K E L E+ ++ H ++ ++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN---EVVIMRDYQHFNVVEMYK 109
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++++E+ GG L D IV + RL E++ +L A+AYLH G HRD+K
Sbjct: 110 SYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APEVI + Y +E D+WS
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKR-KXLVGTPYWMAPEVI-SRSLYATEVDIWS 226
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNG---KYTEPPWMSPNSRQIVRSMLQVEPGKR 250
+G+M+ ++ G P+ SDS Q ++ + K +SP R + ML +P +R
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
Query: 251 IKIQDLLGHNWV 262
Q+LL H ++
Sbjct: 287 ATAQELLDHPFL 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---KYTEPPWMSPNSRQ 466
S+ Y +E D+WS+G+M+ ++ G P+ SDS Q ++ + K +SP R
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
+ ML +P +R Q+LL H ++
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFL 298
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 358
+ Y +E D+WS+G+M+ ++ G P+ SDS
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 138/257 (53%), Gaps = 12/257 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT TG++VA+K M +K E L E+ ++ H ++ ++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYHHDNVVDMYS 109
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ +L A++YLH+ G HRD+K
Sbjct: 110 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APEVI + YG+E D+WS
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KXLVGTPYWMAPEVI-SRLPYGTEVDIWS 226
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKI---LNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
+G+M+ ++ G P+ ++ Q +I L + + +S R + ML EP +R
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQR 286
Query: 251 IKIQDLLGHNWVKM-GP 266
Q+LLGH ++K+ GP
Sbjct: 287 ATAQELLGHPFLKLAGP 303
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI---LNGKYTEPPWMSPNSRQ 466
S+ YG+E D+WS+G+M+ ++ G P+ ++ Q +I L + + +S R
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRG 273
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKM-GP 495
+ ML EP +R Q+LLGH ++K+ GP
Sbjct: 274 FLDLMLVREPSQRATAQELLGHPFLKLAGP 303
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMP 372
YG+E D+WS+G+M+ ++ G P+ ++ Q +I P
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 17/269 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN---ALK 61
D + +Y +G G V A V TG++VAI+ M + P+ +L IN ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMR 72
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
+ +I +++V+EY GG L D +V + E + A R+ L A+ +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNYAAPEVI 179
LH HRD+K +N+LL + ++KL DFG CA+ PE +S+ T G+P + APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAPEVV 188
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSR 236
++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 T-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ L ++ KR ++LL H ++K+
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
+ L ++ KR ++LL H ++K+
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 17/269 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN---ALK 61
D + +Y +G G V A V TG++VAI+ M + P+ +L IN ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMR 72
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
+ +I +++V+EY GG L D +V + E + A R+ L A+ +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNYAAPEVI 179
LH HRD+K +N+LL + ++KL DFG CA+ PE +S+ G+P + APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAPEVV 188
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSR 236
++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 T-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ L+++ KR ++LL H ++K+
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIA 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
+ L+++ KR ++LL H ++K+
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQHQFLKIA 276
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 136/269 (50%), Gaps = 17/269 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN---ALK 61
D + +Y +G G V A V TG++VAI+ M + P+ +L IN ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMR 72
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
+ +I +++V+EY GG L D +V + E + A R+ L A+ +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNYAAPEVI 179
LH HRD+K +N+LL + ++KL DFG CA+ PE S++ G+P + APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEVV 188
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSR 236
++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 T-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ L ++ KR ++LL H ++K+
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
+ L ++ KR ++LL H ++K+
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 41/291 (14%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V A + L AIK ++ E L + E+ L ++HQ++ + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 75 -------------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--AFFRQILSAV 119
++ S +F+ +EYC G L D ++ + L ++ FRQIL A+
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYWRLFRQILEAL 129
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-------------SQLQT 166
+Y+H G HRDLKP N+ +D ++N+K+ DFGL L+ L +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGK 224
+ G+ Y A EV+ G +Y + D++S+G++ + ++ PF + + ++ L K+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL-KKLRSVS 245
Query: 225 YTEPPWMSPN----SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
PP N ++I+R ++ +P KR + LL W+ + +D +
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPN----SRQ 466
+Y + D++S+G++ + ++ PF + + ++ L K+ + PP N ++
Sbjct: 207 HYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL-KKLRSVSIEFPPDFDDNKMKVEKK 262
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE 502
I+R ++ +P KR + LL W+ + +D ++E
Sbjct: 263 IIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 17/269 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN---ALK 61
D + +Y +G G V A V TG++VAI+ M + P+ +L IN ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMR 73
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
+ +I +++V+EY GG L D +V + E + A R+ L A+ +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNYAAPEVI 179
LH HR++K +N+LL + ++KL DFG CA+ PE +S+ T G+P + APEV+
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAPEVV 189
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSR 236
++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 190 T-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ L+++ KR ++L+ H ++K+
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLKIA 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 249
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
+ L+++ KR ++L+ H ++K+
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQHQFLKIA 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 17/269 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN---ALK 61
D + +Y +G G V A V TG++VAI+ M + P+ +L IN ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMR 73
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
+ +I +++V+EY GG L D +V + E + A R+ L A+ +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNYAAPEVI 179
LH HRD+K +N+LL + ++KL DFG CA+ PE +S+ G+P + APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAPEVV 189
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSR 236
++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 190 T-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMG 265
+ L+++ KR ++L+ H ++K+
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLKIA 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG--KYTEPPWMSPNSRQ 466
+++ YG + D+WS+G+M ++ G P+ + + + LY NG + P +S R
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 249
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMG 494
+ L+++ KR ++L+ H ++K+
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQHQFLKIA 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 3/209 (1%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIK--IMKKATLGEDLPRVKLEINALKHI 63
+ +Y + +G GG + V LA + KVAIK + E L R + E++ +
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
SHQ+I + V E ++V+EY G L ++I L + F QIL + + H
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
+ HRD+KP+N+L+D N+ LK+ DFG+ +Q G+ Y +PE KG +
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG-E 187
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDS 212
TD++S+G++LY +L G PF+ ++
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGET 216
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 335 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMPICTILISQYFP 383
TD++S+G++LY +L G PF+ ++ + K + +P T + + P
Sbjct: 193 TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 418 TDVWSMGVMLYALLCGFLPFDSDS 441
TD++S+G++LY +L G PF+ ++
Sbjct: 193 TDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQ 73
T+G+G + + + G+ + K + ++ E ++ + E+N L+ + H +I + +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 74 VI--ETSSHIFMVIEYCPGGELLDHIV----ERQRLGEKESRAFFRQILSAVAYLHHL-- 125
I T++ +++V+EYC GG+L I ERQ L E+ Q+ A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 126 -GYA--HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
G+ HRDLKP NV LD QN+KL DFGL A+ S +T G+P Y +PE + +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGL-ARILNHDTSFAKTFVGTPYYMSPEQM-NR 190
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIVRS 241
Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 250
Query: 242 MLQVEPGKRIKIQDLL 257
ML ++ R ++++L
Sbjct: 251 MLNLKDYHRPSVEEIL 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIV 468
++ Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 469 RSMLQVEPGKRIKIQDLL 486
ML ++ R ++++L
Sbjct: 249 TRMLNLKDYHRPSVEEIL 266
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 321 LSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+S ++ + Y ++D+WS+G +LY L PF + S +L KI
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKL 71
R +G GGF +V TG+ A K + K L + +E L + + I L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHI--VERQRLGEKESRAFF--RQILSAVAYLHHLGY 127
ET + + +V+ GG++ HI V+ G +E RA F QI+S + +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
+RDLKPENVLLD + N+++ D GL + + G +++ + G+P + APE++ G++Y S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 188 ETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVRSML 243
D +++GV LY ++ PF + + ++ +L ++L T P SP S+ ++L
Sbjct: 370 -VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 244 QVEPGKRIKIQD 255
Q +P KR+ +D
Sbjct: 429 QKDPEKRLGFRD 440
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVR 469
Y D +++GV LY ++ PF + + ++ +L ++L T P SP S+
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 470 SMLQVEPGKRIKIQD 484
++LQ +P KR+ +D
Sbjct: 426 ALLQKDPEKRLGFRD 440
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKL 71
R +G GGF +V TG+ A K + K L + +E L + + I L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHI--VERQRLGEKESRAFF--RQILSAVAYLHHLGY 127
ET + + +V+ GG++ HI V+ G +E RA F QI+S + +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
+RDLKPENVLLD + N+++ D GL + + G +++ + G+P + APE++ G++Y S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 188 ETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVRSML 243
D +++GV LY ++ PF + + ++ +L ++L T P SP S+ ++L
Sbjct: 370 -VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 244 QVEPGKRIKIQD 255
Q +P KR+ +D
Sbjct: 429 QKDPEKRLGFRD 440
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVR 469
Y D +++GV LY ++ PF + + ++ +L ++L T P SP S+
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 470 SMLQVEPGKRIKIQD 484
++LQ +P KR+ +D
Sbjct: 426 ALLQKDPEKRLGFRD 440
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKL 71
R +G GGF +V TG+ A K + K L + +E L + + I L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHI--VERQRLGEKESRAFF--RQILSAVAYLHHLGY 127
ET + + +V+ GG++ HI V+ G +E RA F QI+S + +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
+RDLKPENVLLD + N+++ D GL + + G +++ + G+P + APE++ G++Y S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 188 ETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVRSML 243
D +++GV LY ++ PF + + ++ +L ++L T P SP S+ ++L
Sbjct: 370 -VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 244 QVEPGKRIKIQD 255
Q +P KR+ +D
Sbjct: 429 QKDPEKRLGFRD 440
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVR 469
Y D +++GV LY ++ PF + + ++ +L ++L T P SP S+
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 470 SMLQVEPGKRIKIQD 484
++LQ +P KR+ +D
Sbjct: 426 ALLQKDPEKRLGFRD 440
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKL 71
R +G GGF +V TG+ A K + K L + +E L + + I L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHI--VERQRLGEKESRAFF--RQILSAVAYLHHLGY 127
ET + + +V+ GG++ HI V+ G +E RA F QI+S + +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
+RDLKPENVLLD + N+++ D GL + + G +++ + G+P + APE++ G++Y S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 188 ETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVRSML 243
D +++GV LY ++ PF + + ++ +L ++L T P SP S+ ++L
Sbjct: 370 -VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 244 QVEPGKRIKIQD 255
Q +P KR+ +D
Sbjct: 429 QKDPEKRLGFRD 440
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS--DSID--QLYDKILNGKYTEPPWMSPNSRQIVR 469
Y D +++GV LY ++ PF + + ++ +L ++L T P SP S+
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 470 SMLQVEPGKRIKIQD 484
++LQ +P KR+ +D
Sbjct: 426 ALLQKDPEKRLGFRD 440
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 41/291 (14%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V A + L AIK ++ E L + E+ L ++HQ++ + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 75 -------------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--AFFRQILSAV 119
++ S +F+ +EYC L D ++ + L ++ FRQIL A+
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEAL 129
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-------------SQLQT 166
+Y+H G HRDLKP N+ +D ++N+K+ DFGL L+ L +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGK 224
+ G+ Y A EV+ G +Y + D++S+G++ + ++ PF + + ++ L K+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL-KKLRSVS 245
Query: 225 YTEPPWMSPN----SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
PP N ++I+R ++ +P KR + LL W+ + +D +
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPN----SRQ 466
+Y + D++S+G++ + ++ PF + + ++ L K+ + PP N ++
Sbjct: 207 HYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL-KKLRSVSIEFPPDFDDNKMKVEKK 262
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE 502
I+R ++ +P KR + LL W+ + +D ++E
Sbjct: 263 IIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQ 73
T+G+G + + + G+ + K + ++ E ++ + E+N L+ + H +I + +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 74 VI--ETSSHIFMVIEYCPGGELLDHIV----ERQRLGEKESRAFFRQILSAVAYLHHL-- 125
I T++ +++V+EYC GG+L I ERQ L E+ Q+ A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 126 -GYA--HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
G+ HRDLKP NV LD QN+KL DFGL A+ E + G+P Y +PE + +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGL-ARILNHDEDFAKEFVGTPYYMSPEQM-NR 190
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIVRS 241
Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 250
Query: 242 MLQVEPGKRIKIQDLL 257
ML ++ R ++++L
Sbjct: 251 MLNLKDYHRPSVEEIL 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIV 468
++ Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 469 RSMLQVEPGKRIKIQDLL 486
ML ++ R ++++L
Sbjct: 249 TRMLNLKDYHRPSVEEIL 266
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 321 LSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+S ++ + Y ++D+WS+G +LY L PF + S +L KI
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYLHHLGYAHRDL 132
I T + +++V E+ +L D + G +++ Q+L +A+ H HRDL
Sbjct: 71 IHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KPEN+L++ +KL DFGL A+ G + Y APE++ G +YY + D+W
Sbjct: 130 KPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 193 SMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW---- 230
S+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 231 -------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQ 73
T+G+G + + + G+ + K + ++ E ++ + E+N L+ + H +I + +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 74 VI--ETSSHIFMVIEYCPGGELLDHIV----ERQRLGEKESRAFFRQILSAVAYLHHL-- 125
I T++ +++V+EYC GG+L I ERQ L E+ Q+ A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 126 -GYA--HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
G+ HRDLKP NV LD QN+KL DFGL A+ S + G+P Y +PE + +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGL-ARILNHDTSFAKAFVGTPYYMSPEQM-NR 190
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIVRS 241
Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 250
Query: 242 MLQVEPGKRIKIQDLL 257
ML ++ R ++++L
Sbjct: 251 MLNLKDYHRPSVEEIL 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSRQIV 468
++ Y ++D+WS+G +LY L PF + S +L KI GK+ P+ S +I+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 469 RSMLQVEPGKRIKIQDLL 486
ML ++ R ++++L
Sbjct: 249 TRMLNLKDYHRPSVEEIL 266
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 321 LSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI 366
+S ++ + Y ++D+WS+G +LY L PF + S +L KI
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 12/270 (4%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
+L +Y++ +G G F V + + K +K G D VK EI+ L
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK--VKGTDQVLVKKEISILNIAR 59
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLH 123
H++I L + E+ + M+ E+ G ++ + I L E+E ++ Q+ A+ +LH
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 124 HLGYAHRDLKPENVLLD--RNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
H D++PEN++ R+ +K+I+FG + + G +L + +P Y APEV
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT--APEYYAPEV-HQ 176
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--MSPNSRQ 237
+ TD+WS+G ++Y LL G PF +++ Q+ + I+N +YT E + +S +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 238 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPE 267
V +L E R+ + L H W+K E
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQKIE 266
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 407 APSSKQY--YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPW--M 460
AP Q+ + TD+WS+G ++Y LL G PF +++ Q+ + I+N +YT E + +
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE 496
S + V +L E R+ + L H W+K E
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 332 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILS 368
+ TD+WS+G ++Y LL G PF +++ Q+ + I++
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 37/293 (12%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKH 62
+D+ N +E+ +G G + V A + LTGE VA+K ++ T E +P + EI+ LK
Sbjct: 4 VDMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 63 ISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAV 119
++H +I KL VI T + +++V E+ + L ++ L +++ Q+L +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
A+ H HRDLKP+N+L++ +KL DFGL A+ G + Y APE++
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL-------- 221
G +YY + D+WS+G + ++ F DS IDQL+ D+++
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 222 NGKYTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ K + P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 163 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYLHHLGYAHRDL 132
I T + +++V E+ +L D + G +++ Q+L +A+ H HRDL
Sbjct: 73 IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+W
Sbjct: 132 KPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 193 SMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW---- 230
S+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 231 -------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYLHHLGYAHRDL 132
I T + +++V E+ +L D + G +++ Q+L +A+ H HRDL
Sbjct: 74 IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+W
Sbjct: 133 KPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 193 SMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW---- 230
S+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 231 -------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 48/270 (17%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHIC 69
+ + +G G KV + T EK A+K++ +D P+ + E+ S HI
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIV 74
Query: 70 KLFQVIET----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLH 123
++ V E + +V+E GGEL I +R Q E+E+ + I A+ YLH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 124 HLGYAHRDLKPENVLLDR---NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
+ AHRD+KPEN+L N LKL DFG + G
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG---------------------- 172
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--MS 232
+ Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +S
Sbjct: 173 --EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 230
Query: 233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 262
+ ++R++L+ EP +R+ I + + H W+
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT--EPPW--M 460
++ + Y D+WS+GV++Y LLCG+ PF S+ + +I G+Y P W +
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 229
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
S + ++R++L+ EP +R+ I + + H W+
Sbjct: 230 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSD 357
K+ + Y D+WS+GV++Y LLCG+ PF S+
Sbjct: 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 10/197 (5%)
Query: 14 RTVGSGGFAKVKL----ATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV L T+ TGE VA+K +K + K EI+ L+ + H+HI
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 70 KLFQVIE--TSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K E ++ + +V+EY P G L D++ R +G + F +QI +AYLH Y
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYY 185
HRDL NVLLD ++ +K+ DFGL A PEG +++ SP + APE +K ++Y
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 186 GSETDVWSMGVMLYALL 202
+ +DVWS GV LY LL
Sbjct: 216 YA-SDVWSFGVTLYELL 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 72 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKPEN+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 130 LKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 73 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKPEN+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 131 LKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ L ++ L +++ Q+L +A+ H HRD
Sbjct: 74 IHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKPEN+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 132 LKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ L ++ L +++ Q+L +A+ H HRD
Sbjct: 72 IHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKPEN+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 130 LKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 78 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 136 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDI 194
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 195 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 254
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 166 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F +V A + L AIK ++ E L + E+ L ++HQ++ + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 75 -------------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--AFFRQILSAV 119
++ S +F+ EYC L D ++ + L ++ FRQIL A+
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEAL 129
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-------------SQLQT 166
+Y+H G HR+LKP N+ +D ++N+K+ DFGL L+ L +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKY 225
+ G+ Y A EV+ G +Y + D +S+G++ + + PF + + K+ +
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSI 246
Query: 226 TEPPWMSPN----SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
PP N ++I+R ++ +P KR + LL W+ + +D +
Sbjct: 247 EFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPPWMSPN----SRQI 467
+Y + D +S+G++ + + PF + + K+ + PP N ++I
Sbjct: 207 HYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKI 263
Query: 468 VRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLRE 502
+R ++ +P KR + LL W+ + +D ++E
Sbjct: 264 IRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 72 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 160 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 72 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 78 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 136 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 194
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 195 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 254
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 166 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 73 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 131 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 75 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 133 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 191
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 192 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 251
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 252 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 163 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 74 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 73 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 131 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 74 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 72 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 74 IHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGLC + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D L +D
Sbjct: 324 DQSLESRD 331
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 74 IHTENKLYLVFEFL--HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEHV--HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 135/267 (50%), Gaps = 12/267 (4%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALK 61
Y +Y+ + +G G F K L G + IK + + + ++ + E+ L
Sbjct: 19 YFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAF--FRQILSAV 119
++ H +I + + E + +++V++YC GG+L I ++ + +E + F QI A+
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC-GSPNYAAPEV 178
++H HRD+K +N+ L ++ ++L DFG+ +E L +C G+P Y +PE+
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEI 196
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP---WMSPNS 235
+ K Y +++D+W++G +LY L F++ S+ L KI++G + PP S +
Sbjct: 197 CENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPVSLHYSYDL 253
Query: 236 RQIVRSMLQVEPGKRIKIQDLLGHNWV 262
R +V + + P R + +L ++
Sbjct: 254 RSLVSQLFKRNPRDRPSVNSILEKGFI 280
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP---WMSPNSRQIVRS 470
Y +++D+W++G +LY L F++ S+ L KI++G + PP S + R +V
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPVSLHYSYDLRSLVSQ 259
Query: 471 MLQVEPGKRIKIQDLLGHNWV 491
+ + P R + +L ++
Sbjct: 260 LFKRNPRDRPSVNSILEKGFI 280
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMPICTI--------LISQYF 382
Y +++D+W++G +LY L F++ S+ L KI+S P ++ L+SQ F
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLF 261
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+K ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +++ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Query: 14 RTVGSGGFAKVKL----ATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV L T+ TGE VA+K +K + K EI+ L+ + H+HI
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 70 KLFQVIETSSH--IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K E + +V+EY P G L D++ R +G + F +QI +AYLH Y
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYY 185
HR+L NVLLD ++ +K+ DFGL A PEG +++ SP + APE +K ++Y
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 186 GSETDVWSMGVMLYALL 202
+ +DVWS GV LY LL
Sbjct: 199 YA-SDVWSFGVTLYELL 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Query: 14 RTVGSGGFAKVKL----ATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV L T+ TGE VA+K +K + K EI+ L+ + H+HI
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 70 KLFQVIETSSH--IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K E + +V+EY P G L D++ R +G + F +QI +AYLH Y
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYY 185
HR+L NVLLD ++ +K+ DFGL A PEG +++ SP + APE +K ++Y
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 186 GSETDVWSMGVMLYALL 202
+ +DVWS GV LY LL
Sbjct: 199 YA-SDVWSFGVTLYELL 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+ ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 71 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + LTGE VA+ ++ T E +P + EI+ LK ++H +I KL V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKE---SRAFFRQILSAVAYLHHLGYAHRD 131
I T + +++V E+ + L ++ L +++ Q+L +A+ H HRD
Sbjct: 70 IHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
LKP+N+L++ +KL DFGL A+ G + Y APE++ G +YY + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 192 WSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGKYTEPPW--- 230
WS+G + ++ F DS IDQL+ D+++ + K + P W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 231 --------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + R ++ ML +P KRI + L H + +
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY---------DKIL--------NGK 453
+YY + D+WS+G + ++ F DS IDQL+ D+++ + K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 454 YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ P W + + R ++ ML +P KRI + L H + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 309 TYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLY 363
TY ++ T G +YY + D+WS+G + ++ F DS IDQL+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 140/273 (51%), Gaps = 29/273 (10%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 84
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 85 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELI-SRLPYGPEVDIWS 201
Query: 194 MGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWM------SPNSRQIVRSML 243
+G+M+ ++ G P+ ++ ++ + D + PP + SP+ + + +L
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------PPRLKNLHKVSPSLKGFLDRLL 254
Query: 244 QVEPGKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+P +R +LL H ++ K GP P S P
Sbjct: 255 VRDPAQRATAAELLKHPFLAKAGP---PASIVP 284
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWM----- 460
S+ YG E D+WS+G+M+ ++ G P+ ++ ++ + D + PP +
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------PPRLKNLHK 241
Query: 461 -SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
SP+ + + +L +P +R +LL H ++ K GP
Sbjct: 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 21/269 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 93
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 94 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELI-SRLPYGPEVDIWS 210
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQVEP 247
+G+M+ ++ G P+ ++ + I + PP + SP+ + + +L +P
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 267
Query: 248 GKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+R +LL H ++ K GP P S P
Sbjct: 268 AQRATAAELLKHPFLAKAGP---PASIVP 293
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPN 463
S+ YG E D+WS+G+M+ ++ G P+ ++ + I + PP + SP+
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPS 254
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
+ + +L +P +R +LL H ++ K GP
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 287
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 140/273 (51%), Gaps = 29/273 (10%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 88
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 89 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELI-SRLPYGPEVDIWS 205
Query: 194 MGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWM------SPNSRQIVRSML 243
+G+M+ ++ G P+ ++ ++ + D + PP + SP+ + + +L
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------PPRLKNLHKVSPSLKGFLDRLL 258
Query: 244 QVEPGKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+P +R +LL H ++ K GP P S P
Sbjct: 259 VRDPAQRATAAELLKHPFLAKAGP---PASIVP 288
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWM----- 460
S+ YG E D+WS+G+M+ ++ G P+ ++ ++ + D + PP +
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------PPRLKNLHK 245
Query: 461 -SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
SP+ + + +L +P +R +LL H ++ K GP
Sbjct: 246 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 282
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 21/269 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 95
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 96 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELI-SRLPYGPEVDIWS 212
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQVEP 247
+G+M+ ++ G P+ ++ + I + PP + SP+ + + +L +P
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 269
Query: 248 GKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+R +LL H ++ K GP P S P
Sbjct: 270 AQRATAAELLKHPFLAKAGP---PASIVP 295
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPN 463
S+ YG E D+WS+G+M+ ++ G P+ ++ + I + PP + SP+
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPS 256
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
+ + +L +P +R +LL H ++ K GP
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 289
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 21/269 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 138
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 139 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELIS-RLPYGPEVDIWS 255
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQVEP 247
+G+M+ ++ G P+ ++ + I + PP + SP+ + + +L +P
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 312
Query: 248 GKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+R +LL H ++ K GP P S P
Sbjct: 313 AQRATAAELLKHPFLAKAGP---PASIVP 338
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPN 463
S+ YG E D+WS+G+M+ ++ G P+ ++ + I + PP + SP+
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPS 299
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
+ + +L +P +R +LL H ++ K GP
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKL 71
R +G G F KV + T + A+K M K E ++ V E+ ++ + H + L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ + +FMV++ GG+L H+ + E+ + F +++ A+ YL + HRD
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140
Query: 132 LKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCGSPNYAAPEVIKGKQ--YYGSE 188
+KP+N+LLD + ++ + DF + A P E+Q+ T G+ Y APE+ ++ Y
Sbjct: 141 MKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 189 TDVWSMGVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D WS+GV Y LL G P+ S S ++ T P S +++ +L+
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEP 257
Query: 246 EPGKRI 251
P +R
Sbjct: 258 NPDQRF 263
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 34/278 (12%)
Query: 14 RTVGSGGFAKVKL----ATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV L T+ TGE VA+K +K+ + + EI L+ + H+HI
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 70 KLFQVIETSSH--IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K E + +V+EY P G L D++ R +G + F +QI +AYLH Y
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYY 185
HR L NVLLD ++ +K+ DFGL A PEG +++ SP + APE +K ++Y
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
+ +DVWS GV LY LL DS ++ + K+TE + ++R +
Sbjct: 194 YA-SDVWSFGVTLYELLT-----YCDS-----NQSPHTKFTELIGHTQGQMTVLRLTELL 242
Query: 246 EPGKRI--------KIQDLLGHNWVKMGPEDNPVSFRP 275
E G+R+ +I L+ + W + SFRP
Sbjct: 243 ERGERLPRPDRCPCEIYHLMKNCW------ETEASFRP 274
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 325 KQGKQYYGSETDVWSMGVMLYALL 348
K+ K YY S DVWS GV LY LL
Sbjct: 188 KECKFYYAS--DVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 34/278 (12%)
Query: 14 RTVGSGGFAKVKL----ATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV L T+ TGE VA+K +K+ + + EI L+ + H+HI
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 70 KLFQVIETSSH--IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY 127
K E + +V+EY P G L D++ R +G + F +QI +AYLH Y
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYY 185
HR L NVLLD ++ +K+ DFGL A PEG +++ SP + APE +K ++Y
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
+ +DVWS GV LY LL DS ++ + K+TE + ++R +
Sbjct: 193 YA-SDVWSFGVTLYELLT-----YCDS-----NQSPHTKFTELIGHTQGQMTVLRLTELL 241
Query: 246 EPGKRI--------KIQDLLGHNWVKMGPEDNPVSFRP 275
E G+R+ +I L+ + W + SFRP
Sbjct: 242 ERGERLPRPDRCPCEIYHLMKNCW------ETEASFRP 273
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 325 KQGKQYYGSETDVWSMGVMLYALL 348
K+ K YY S DVWS GV LY LL
Sbjct: 187 KECKFYYAS--DVWSFGVTLYELL 208
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 21/269 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIM--KKATLGEDLPRVKLEINALKHISHQHICKLFQ 73
+G G V +AT +G+ VA+K M +K E L E+ ++ H+++ +++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 215
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+++V+E+ GG L D IV R+ E++ A +L A++ LH G HRD+K
Sbjct: 216 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 134 PENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWS 193
+++LL + +KL DFG CA+ + + + G+P + APE+I + YG E D+WS
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELI-SRLPYGPEVDIWS 332
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQVEP 247
+G+M+ ++ G P+ ++ + I + PP + SP+ + + +L +P
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389
Query: 248 GKRIKIQDLLGHNWV-KMGPEDNPVSFRP 275
+R +LL H ++ K GP P S P
Sbjct: 390 AQRATAAELLKHPFLAKAGP---PASIVP 415
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPN 463
S+ YG E D+WS+G+M+ ++ G P+ ++ + I + PP + SP+
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPS 376
Query: 464 SRQIVRSMLQVEPGKRIKIQDLLGHNWV-KMGP 495
+ + +L +P +R +LL H ++ K GP
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
YG E D+WS+G+M+ ++ G P+
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 34/283 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R+ Y L+ +GSG A V+ A EKVAIK + + + EI A+ H
Sbjct: 9 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHP 68
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLD---HIVERQR-----LGEKESRAFFRQILSA 118
+I + +++V++ GG +LD HIV + L E R++L
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----SQLQTSCGSPNYA 174
+ YLH G HRD+K N+LL + ++++ DFG+ A G + +T G+P +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF---------------DSDSIDQ-LYD 218
APEV++ + Y + D+WS G+ L G P+ D S++ + D
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 248
Query: 219 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
K + KY + + R+++ LQ +P KR +LL H +
Sbjct: 249 KEMLKKYGK------SFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 34/283 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R+ Y L+ +GSG A V+ A EKVAIK + + + EI A+ H
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHP 73
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLD---HIVERQR-----LGEKESRAFFRQILSA 118
+I + +++V++ GG +LD HIV + L E R++L
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----SQLQTSCGSPNYA 174
+ YLH G HRD+K N+LL + ++++ DFG+ A G + +T G+P +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF---------------DSDSIDQ-LYD 218
APEV++ + Y + D+WS G+ L G P+ D S++ + D
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 219 KILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
K + KY + + R+++ LQ +P KR +LL H +
Sbjct: 254 KEMLKKYGK------SFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLF 72
R VGSG + V A +KVA+K + + R E+ LKH+ H+++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V IE S +++V G L++IV+ Q L ++ + Q+L + Y+H G
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP NV ++ + L+++DFGL + + + + T Y APE++ +Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW----YRAPEIMLNWMHYN 207
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ LL G F SD IDQL + P ++ S + R+ +Q
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 246 EP 247
P
Sbjct: 268 LP 269
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNAMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 205
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 325
Query: 276 DHELREKD 283
D +D
Sbjct: 326 DQSFESRD 333
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 208
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 328
Query: 276 DHELREKD 283
D +D
Sbjct: 329 DQSFESRD 336
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP-RVKLEINALKHI 63
++R Y + VGSG + V A TG KVAIK + + E R E+ LKH+
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 81
Query: 64 SHQHICKLFQV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILS 117
H+++ L V ++ + ++V+ + G L +++ ++LGE + Q+L
Sbjct: 82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+ Y+H G HRDLKP N+ ++ + LK++DFGL + + + + T Y APE
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRW----YRAPE 195
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFD-SDSIDQL 216
VI Y D+WS+G ++ ++ G F SD +DQL
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPT 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 214
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 274
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 334
Query: 276 DHELREKD 283
D +D
Sbjct: 335 DQSFESRD 342
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLF 72
R VGSG + V A +KVA+K + + R E+ LKH+ H+++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V IE S +++V G L++IV+ Q L ++ + Q+L + Y+H G
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP NV ++ + L+++DFGL + + + + T Y APE++ +Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW----YRAPEIMLNWMHYN 207
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ LL G F SD IDQL + P ++ S + R+ +Q
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 246 EP 247
P
Sbjct: 268 LP 269
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + K R E+ LKH+ H+++ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 215
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 335
Query: 276 DHELREKD 283
D +D
Sbjct: 336 DQSFESRD 343
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPQ 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 209
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 329
Query: 276 DHELREKD 283
D +D
Sbjct: 330 DQSFESRD 337
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + T Y APE++ +Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW----YRAPEIMLNWMHYNQT 210
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 330
Query: 276 DHELREKD 283
D L +D
Sbjct: 331 DQSLESRD 338
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPR 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
+GSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 208
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 328
Query: 276 DHELREKD 283
D +D
Sbjct: 329 DQSFESRD 336
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 199
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 259
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 319
Query: 276 DHELREKD 283
D +D
Sbjct: 320 DQSFESRD 327
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 200
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 260
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 320
Query: 276 DHELREKD 283
D +D
Sbjct: 321 DQSFESRD 328
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 200
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 260
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 320
Query: 276 DHELREKD 283
D +D
Sbjct: 321 DQSFESRD 328
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 10/257 (3%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
+LE+ +G G + V A H TG+ VAIK + + DL + EI+ ++ H+ K
Sbjct: 33 VLEK-LGEGSYGSVYKAIHKETGQIVAIK---QVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAH 129
+ ++ +++V+EYC G + D I R + L E E + L + YLH + H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
RD+K N+LL+ + KL DFG+ + + ++ G+P + APEVI+ + Y
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXM-AKRNXVIGTPFWMAPEVIQ-EIGYNCVA 206
Query: 190 DVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILN--GKYTEPPWMSPNSRQIVRSMLQVE 246
D+WS+G+ + G P+ D + ++ N + +P S N V+ L
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKS 266
Query: 247 PGKRIKIQDLLGHNWVK 263
P +R LL H +V+
Sbjct: 267 PEQRATATQLLQHPFVR 283
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRW----YRAPEIMLNWMHYNQT 226
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 286
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 346
Query: 276 DHELREKD 283
D +D
Sbjct: 347 DQSFESRD 354
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 205
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 325
Query: 276 DHELREKD 283
D +D
Sbjct: 326 DQSFESRD 333
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 210
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 330
Query: 276 DHELREKD 283
D +D
Sbjct: 331 DQSFESRD 338
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 208
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 328
Query: 276 DHELREKD 283
D +D
Sbjct: 329 DQSFESRD 336
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 208
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 328
Query: 276 DHELREKD 283
D +D
Sbjct: 329 DQSFESRD 336
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 146
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 202
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 203 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 262
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 263 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 322
Query: 276 DHELREKD 283
D +D
Sbjct: 323 DQSFESRD 330
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 201
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 202 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 261
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 262 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 321
Query: 276 DHELREKD 283
D +D
Sbjct: 322 DQSFESRD 329
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLF 72
R VGSG + V A +KVA+K + + R E+ LKH+ H+++ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V IE S +++V G L++IV+ Q L ++ + Q+L + Y+H G
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP NV ++ + L+++DFGL + + + + T Y APE++ +Y
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRW----YRAPEIMLNWMHYN 199
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ LL G F SD IDQL + P ++ S + R+ +Q
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 259
Query: 246 EP 247
P
Sbjct: 260 LP 261
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPF 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 215
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 335
Query: 276 DHELREKD 283
D +D
Sbjct: 336 DQSFESRD 343
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 215
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 335
Query: 276 DHELREKD 283
D +D
Sbjct: 336 DQSFESRD 343
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 214
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 274
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 334
Query: 276 DHELREKD 283
D +D
Sbjct: 335 DQSFESRD 342
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 205
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 325
Query: 276 DHELREKD 283
D +D
Sbjct: 326 DQSFESRD 333
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 205
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 325
Query: 276 DHELREKD 283
D +D
Sbjct: 326 DQSFESRD 333
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 213
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 214 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 273
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 274 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 333
Query: 276 DHELREKD 283
D +D
Sbjct: 334 DQSFESRD 341
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 209
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 329
Query: 276 DHELREKD 283
D +D
Sbjct: 330 DQSFESRD 337
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 14/257 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F KV A + TG A K+++ + E+L +EI L H +I KL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
++++IE+CPGG + ++E R L E + + RQ+L A+ +LH HRDLK
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY----YGSETD 190
NVL+ +++L DFG+ AK L+ + + G+P + APEV+ + Y + D
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPYDYKAD 196
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-----RQIVRSMLQV 245
+WS+G+ L + P + ++ KI K P ++P+ R ++ L
Sbjct: 197 IWSLGITLIEMAQIEPPHHELNPMRVLLKI--AKSDPPTLLTPSKWSVEFRDFLKIALDK 254
Query: 246 EPGKRIKIQDLLGHNWV 262
P R LL H +V
Sbjct: 255 NPETRPSAAQLLEHPFV 271
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 226
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 286
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 346
Query: 276 DHELREKD 283
D +D
Sbjct: 347 DQSFESRD 354
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V T + VAIKI+ +++ ++ EI L ++ K +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ +++++EY GG LD ++E L E + R+IL + YLH HRD+K
Sbjct: 75 LKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 136 NVLLDRNQNLKLIDFGLCAKPEGGLESQLQ--TSCGSPNYAAPEVIKGKQYYGSETDVWS 193
NVLL + +KL DFG+ + ++Q++ T G+P + APEVIK + Y S+ D+WS
Sbjct: 134 NVLLSEHGEVKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIK-QSAYDSKADIWS 189
Query: 194 MGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
+G+ L G P I + L G Y++P ++ V + L E
Sbjct: 190 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKEFVEACLNKE 243
Query: 247 PGKRIKIQDLLGHNWV 262
P R ++LL H ++
Sbjct: 244 PSFRPTAKELLKHKFI 259
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQ 466
Y S+ D+WS+G+ L G P I + L G Y++P ++
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKE 234
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
V + L EP R ++LL H ++
Sbjct: 235 FVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V T + VAIKI+ +++ ++ EI L ++ K +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ +++++EY GG LD ++E L E + R+IL + YLH HRD+K
Sbjct: 95 LKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 153
Query: 136 NVLLDRNQNLKLIDFGLCAKPEGGLESQLQ--TSCGSPNYAAPEVIKGKQYYGSETDVWS 193
NVLL + +KL DFG+ + ++Q++ T G+P + APEVIK + Y S+ D+WS
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLT---DTQIKRNTFVGTPFWMAPEVIK-QSAYDSKADIWS 209
Query: 194 MGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
+G+ L G P I + L G Y++P ++ V + L E
Sbjct: 210 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKEFVEACLNKE 263
Query: 247 PGKRIKIQDLLGHNWV 262
P R ++LL H ++
Sbjct: 264 PSFRPTAKELLKHKFI 279
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQ 466
Y S+ D+WS+G+ L G P I + L G Y++P ++
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKE 254
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
V + L EP R ++LL H ++
Sbjct: 255 FVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 263
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 199
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 319
Query: 276 DHELREKD 283
D +D
Sbjct: 320 DQSFESRD 327
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 14/257 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F KV A + TG A K+++ + E+L +EI L H +I KL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
++++IE+CPGG + ++E R L E + + RQ+L A+ +LH HRDLK
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY----YGSETD 190
NVL+ +++L DFG+ AK L+ + + G+P + APEV+ + Y + D
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPYDYKAD 204
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-----RQIVRSMLQV 245
+WS+G+ L + P + ++ KI K P ++P+ R ++ L
Sbjct: 205 IWSLGITLIEMAQIEPPHHELNPMRVLLKI--AKSDPPTLLTPSKWSVEFRDFLKIALDK 262
Query: 246 EPGKRIKIQDLLGHNWV 262
P R LL H +V
Sbjct: 263 NPETRPSAAQLLEHPFV 279
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRW----YRAPEIMLNWMHYNQT 223
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 283
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 343
Query: 276 DHELREKD 283
D +D
Sbjct: 344 DQSFESRD 351
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 222
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 282
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 342
Query: 276 DHELREKD 283
D +D
Sbjct: 343 DQSFESRD 350
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 223
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 283
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 343
Query: 276 DHELREKD 283
D +D
Sbjct: 344 DQSFESRD 351
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 209
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 329
Query: 276 DHELREKD 283
D +D
Sbjct: 330 DQSFESRD 337
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + T Y APE++ +Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW----YRAPEIMLNWMHYNQT 210
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 330
Query: 276 DHELREKD 283
D +D
Sbjct: 331 DQSFESRD 338
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 223
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 283
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 343
Query: 276 DHELREKD 283
D +D
Sbjct: 344 DQSFESRD 351
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 263
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 222
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 282
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 342
Query: 276 DHELREKD 283
D +D
Sbjct: 343 DQSFESRD 350
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 49/335 (14%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP-RVKLEINALKHI 63
+L Y+ VGSG + V A +GEKVAIK + + E R E+ LKH+
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 64 SHQHICKLFQVIETSSHIFMVIEY---CPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
H+++ L V +S + ++ P + + + E++ + Q+L +
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
Y+H G HRDLKP N+ ++ + LK++DFGL + + + T Y APEVI
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW----YRAPEVIL 196
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL-------------YDKILNGKYT 226
+Y D+WS+G ++ +L G F D +DQL + + LN K
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256
Query: 227 EP-----------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+ P SP + ++ ML+++ KR+ L H + + P +
Sbjct: 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE--PFRD 314
Query: 270 PVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQ 304
P + E ++ DD + +H++L+ D+ W Q
Sbjct: 315 P---EEETEAQQPFDDSL----EHEKLTVDE-WKQ 341
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 147/335 (43%), Gaps = 49/335 (14%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP-RVKLEINALKHI 63
+L Y+ VGSG + V A +GEKVAIK + + E R E+ LKH+
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 64 SHQHICKLFQVIETSSHIFMVIEY---CPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
H+++ L V +S + ++ P + + E++ + Q+L +
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
Y+H G HRDLKP N+ ++ + LK++DFGL + + + T Y APEVI
Sbjct: 159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW----YRAPEVIL 214
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL-------------YDKILNGKYT 226
+Y D+WS+G ++ +L G F D +DQL + + LN K
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274
Query: 227 EP-----------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN 269
+ P SP + ++ ML+++ KR+ L H + + P +
Sbjct: 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE--PFRD 332
Query: 270 PVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQ 304
P + E ++ DD + +H++L+ D+ W Q
Sbjct: 333 P---EEETEAQQPFDDSL----EHEKLTVDE-WKQ 359
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHICKLFQV 74
VG+G + +V HV TG+ AIK+M G++ +K EIN LK SH ++I +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 75 IETSS------HIFMVIEYCPGGELLDHI--VERQRLGEKESRAFFRQILSAVAYLHHLG 126
+ +++V+E+C G + D I + L E+ R+IL +++LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ--- 183
HRD+K +NVLL N +KL+DFG+ A+ + + + T G+P + APEVI +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPD 208
Query: 184 -YYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILN--GKYTEPPWMSPNSRQIV 239
Y ++D+WS+G+ + G P D + L+ N + W S + +
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW-SKKFQSFI 267
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFR-PDHELREK 282
S L +R + L+ H +++ P + V + DH R K
Sbjct: 268 ESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTK 311
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW----YRAPEIMLNWMHYNQT 199
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 319
Query: 276 DHELREKD 283
D +D
Sbjct: 320 DQSFESRD 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 209
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 269
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 329
Query: 276 DHELREKD 283
D +D
Sbjct: 330 DQSFESRD 337
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V T + VAIKI+ +++ ++ EI L ++ K +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ +++++EY GG LD ++E L E + R+IL + YLH HRD+K
Sbjct: 90 LKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 148
Query: 136 NVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGSETDVWS 193
NVLL + +KL DFG+ + ++Q++ + G+P + APEVIK + Y S+ D+WS
Sbjct: 149 NVLLSEHGEVKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIK-QSAYDSKADIWS 204
Query: 194 MGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
+G+ L G P I + L G Y++P ++ V + L E
Sbjct: 205 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKEFVEACLNKE 258
Query: 247 PGKRIKIQDLLGHNWV 262
P R ++LL H ++
Sbjct: 259 PSFRPTAKELLKHKFI 274
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQ 466
Y S+ D+WS+G+ L G P I + L G Y++P ++
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKE 249
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
V + L EP R ++LL H ++
Sbjct: 250 FVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V T + VAIKI+ +++ ++ EI L ++ K +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ +++++EY GG LD ++E L E + R+IL + YLH HRD+K
Sbjct: 75 LKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 136 NVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGSETDVWS 193
NVLL + +KL DFG+ + ++Q++ + G+P + APEVIK + Y S+ D+WS
Sbjct: 134 NVLLSEHGEVKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIK-QSAYDSKADIWS 189
Query: 194 MGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE 246
+G+ L G P I + L G Y++P ++ V + L E
Sbjct: 190 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKEFVEACLNKE 243
Query: 247 PGKRIKIQDLLGHNWV 262
P R ++LL H ++
Sbjct: 244 PSFRPTAKELLKHKFI 259
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTEPPWMSPNSRQ 466
Y S+ D+WS+G+ L G P I + L G Y++P ++
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------LKE 234
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWV 491
V + L EP R ++LL H ++
Sbjct: 235 FVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++D+GL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + GE A+K ++ E +P + EI+ LK + H +I KL+ V
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 IETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDL 132
I T + +V E+ +LLD V L +++F Q+L+ +AY H HRDL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KP+N+L++R LK+ DFGL A+ G + + Y AP+V+ G + Y + D+W
Sbjct: 127 KPQNLLINREGELKIADFGL-ARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 193 SMGVMLYALLCGFLPF----DSDSIDQLYDKIL---NGK----YTEPPWMSPN------- 234
S+G + ++ G F ++D + +++ +IL N K TE P PN
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 235 ------------SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ ML+++P +RI + L H + K
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + GE A+K ++ E +P + EI+ LK + H +I KL+ V
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 IETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDL 132
I T + +V E+ +LLD V L +++F Q+L+ +AY H HRDL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KP+N+L++R LK+ DFGL A+ G + + Y AP+V+ G + Y + D+W
Sbjct: 127 KPQNLLINREGELKIADFGL-ARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 193 SMGVMLYALLCGFLPF----DSDSIDQLYDKIL---NGK----YTEPPWMSPN------- 234
S+G + ++ G F ++D + +++ +IL N K TE P PN
Sbjct: 186 SVGCIFAEMVNGAPLFPGVSEADQLMRIF-RILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 235 ------------SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ ML+++P +RI + L H + K
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + GE A+K ++ E +P + EI+ LK + H +I KL+ V
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 IETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDL 132
I T + +V E+ +LLD V L +++F Q+L+ +AY H HRDL
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVW 192
KP+N+L++R LK+ DFGL A+ G + + Y AP+V+ G + Y + D+W
Sbjct: 127 KPQNLLINREGELKIADFGL-ARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 193 SMGVMLYALLCGFLPF----DSDSIDQLYDKIL---NGK----YTEPPWMSPN------- 234
S+G + ++ G F ++D + +++ +IL N K TE P PN
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 235 ------------SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
++ ML+++P +RI + L H + K
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + T Y APE++ +Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW----YRAPEIMLNWMHYNQT 210
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 330
Query: 276 DHELREKD 283
D +D
Sbjct: 331 DQSSESRD 338
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 23/259 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALKH 62
+N + R +G GGF +V TG+ A K ++K + GE + + +I L+
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI--LEK 240
Query: 63 ISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFF--RQILSAVA 120
++ + + L ET + +V+ GG+L HI + G E+RA F +I +
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCGSPNYAAPEVI 179
LH +RDLKPEN+LLD + ++++ D GL PEG ++ G+ Y APEV+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVV 357
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYTEPPWMS 232
K ++Y S D W++G +LY ++ G PF + +++L ++ +Y+E S
Sbjct: 358 KNERYTFS-PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYSE--RFS 413
Query: 233 PNSRQIVRSMLQVEPGKRI 251
P +R + +L +P +R+
Sbjct: 414 PQARSLCSQLLCKDPAERL 432
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYTEPPWMSPNS 464
+ Y D W++G +LY ++ G PF + +++L ++ +Y+E SP +
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYSE--RFSPQA 416
Query: 465 RQIVRSMLQVEPGKRI 480
R + +L +P +R+
Sbjct: 417 RSLCSQLLCKDPAERL 432
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
++ +G+GGF V H TGE+VAIK ++ ++ R LEI +K ++H ++
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 72 FQVIETSSHI------FMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQILSAVAYL 122
+V + + + +EYC GG+L ++ + + L E R I SA+ YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 123 HHLGYAHRDLKPENVLLDRN-QNL--KLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEV 178
H HRDLKPEN++L Q L K+ID G + + G +L T G+ Y APE+
Sbjct: 139 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPEL 195
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPF 208
++ K+Y + D WS G + + + GF PF
Sbjct: 196 LEQKKYTVT-VDYWSFGTLAFECITGFRPF 224
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F KV A + T A K++ + E+L +EI+ L H +I KL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
++++++IE+C GG + ++E +R L E + + +Q L A+ YLH HRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI----KGKQYYGSETD 190
N+L + ++KL DFG+ AK ++ + + G+P + APEV+ + Y + D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRTIQRR-DSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQ 244
VWS+G+ L + P + ++ KI +EPP + S N + ++ L+
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 245 VEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHEL-REKDDDVIKVMADHKQ 295
R LL H +V + S +P EL E +V + + D K+
Sbjct: 280 KNVDARWTTSQLLQHPFVTVD------SNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
++ +G+GGF V H TGE+VAIK ++ ++ R LEI +K ++H ++
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 72 FQVIETSSHI------FMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQILSAVAYL 122
+V + + + +EYC GG+L ++ + + L E R I SA+ YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 123 HHLGYAHRDLKPENVLLDRN-QNL--KLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEV 178
H HRDLKPEN++L Q L K+ID G + + G +L T G+ Y APE+
Sbjct: 138 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPEL 194
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPF 208
++ K+Y + D WS G + + + GF PF
Sbjct: 195 LEQKKYTVT-VDYWSFGTLAFECITGFRPF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
++ + + L+ +G G + V ATH TGE VAIK ++ R EI LKH
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 65 HQHICKLFQV-----IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H++I +F + E + ++++ E L ++ Q L + + F Q L AV
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC----------AKPEGGLESQLQTSCG 169
LH HRDLKP N+L++ N +LK+ DFGL ++P G +S +
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ-QSGMTEXVA 184
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL------------ 216
+ Y APEV+ Y DVWS G +L L F D QL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 217 --------------YDKILNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
Y K L P P ++P +++ ML +P KRI ++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 258 GHNWVKM--GPEDNP 270
H +++ P D P
Sbjct: 305 EHPYLQTYHDPNDEP 319
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 23/259 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALKH 62
+N + R +G GGF +V TG+ A K ++K + GE + + +I L+
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI--LEK 240
Query: 63 ISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFF--RQILSAVA 120
++ + + L ET + +V+ GG+L HI + G E+RA F +I +
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCGSPNYAAPEVI 179
LH +RDLKPEN+LLD + ++++ D GL PEG ++ G+ Y APEV+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVV 357
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYTEPPWMS 232
K ++Y S D W++G +LY ++ G PF + +++L ++ +Y+E S
Sbjct: 358 KNERYTFS-PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYSE--RFS 413
Query: 233 PNSRQIVRSMLQVEPGKRI 251
P +R + +L +P +R+
Sbjct: 414 PQARSLCSQLLCKDPAERL 432
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYTEPPWMSPNS 464
+ Y D W++G +LY ++ G PF + +++L ++ +Y+E SP +
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYSE--RFSPQA 416
Query: 465 RQIVRSMLQVEPGKRI 480
R + +L +P +R+
Sbjct: 417 RSLCSQLLCKDPAERL 432
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F KV A + T A K++ + E+L +EI+ L H +I KL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
++++++IE+C GG + ++E +R L E + + +Q L A+ YLH HRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI----KGKQYYGSETD 190
N+L + ++KL DFG+ AK ++ + + G+P + APEV+ + Y + D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRR-DSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQ 244
VWS+G+ L + P + ++ KI +EPP + S N + ++ L+
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 245 VEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHEL-REKDDDVIKVMADHKQ 295
R LL H +V + S +P EL E +V + + D K+
Sbjct: 280 KNVDARWTTSQLLQHPFVTVD------SNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DF L + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
++ + + L+ +G G + V ATH TGE VAIK ++ R EI LKH
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 65 HQHICKLFQV-----IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H++I +F + E + ++++ E L ++ Q L + + F Q L AV
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC----------AKPEGGLESQLQTSCG 169
LH HRDLKP N+L++ N +LK+ DFGL ++P G +S +
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ-QSGMTEYVA 184
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL------------ 216
+ Y APEV+ Y DVWS G +L L F D QL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 217 --------------YDKILNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
Y K L P P ++P +++ ML +P KRI ++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 258 GHNWVKM--GPEDNP 270
H +++ P D P
Sbjct: 305 EHPYLQTYHDPNDEP 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ +L + + QIL + Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 199
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLY----------DKILNGKYTEP--------- 228
D+WS+G ++ LL G F +D IDQL ++L +E
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 229 --PWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 319
Query: 276 DHELREKD 283
D +D
Sbjct: 320 DQSFESRD 327
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 13/260 (5%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL--EIN 58
M Y L N + +E+ +G G F++V A +L G VA+K ++ L + R EI+
Sbjct: 26 MGYNTLAN-FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID 84
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL---LDHIVERQRL-GEKESRAFFRQ 114
LK ++H ++ K + + + +V+E G+L + H +++RL E+ +F Q
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYA 174
+ SA+ ++H HRD+KP NV + +KL D GL + + + G+P Y
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPYYM 203
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID--QLYDKILNGKYTEPP--W 230
+PE I + Y ++D+WS+G +LY + PF D ++ L KI Y P
Sbjct: 204 SPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH 262
Query: 231 MSPNSRQIVRSMLQVEPGKR 250
S RQ+V + +P KR
Sbjct: 263 YSEELRQLVNMCINPDPEKR 282
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSID--QLYDKILNGKYTEPP--WMSPNSRQIVR 469
Y ++D+WS+G +LY + PF D ++ L KI Y P S RQ+V
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN 272
Query: 470 SMLQVEPGKR 479
+ +P KR
Sbjct: 273 MCINPDPEKR 282
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++ FGL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++D GL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 23/292 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F KV A + T A K++ + E+L +EI+ L H +I KL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
++++++IE+C GG + ++E +R L E + + +Q L A+ YLH HRDLK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI----KGKQYYGSETD 190
N+L + ++KL DFG+ AK ++ + G+P + APEV+ + Y + D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRR-DXFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------SPNSRQIVRSMLQ 244
VWS+G+ L + P + ++ KI +EPP + S N + ++ L+
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 245 VEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHEL-REKDDDVIKVMADHKQ 295
R LL H +V + S +P EL E +V + + D K+
Sbjct: 280 KNVDARWTTSQLLQHPFVTVD------SNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
++ + + L+ +G G + V ATH TGE VAIK ++ R EI LKH
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 65 HQHICKLFQV-----IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAV 119
H++I +F + E + ++++ E L ++ Q L + + F Q L AV
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC----------AKPEGGLESQLQTSCG 169
LH HRDLKP N+L++ N +LK+ DFGL ++P G +S +
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ-QSGMVEFVA 184
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL------------ 216
+ Y APEV+ Y DVWS G +L L F D QL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 217 --------------YDKILNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
Y K L P P ++P +++ ML +P KRI ++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 258 GHNWVKM--GPEDNP 270
H +++ P D P
Sbjct: 305 EHPYLQTYHDPNDEP 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++D GL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V A TG +VA+K + + R E+ LKH+ H+++ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++D GL + + + T Y APE++ +Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNQT 203
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQ--------------LYDKILN-------GKYT 226
D+WS+G ++ LL G F +D IDQ L KI + T
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 227 EPPWM---------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVSFRP 275
+ P M +P + ++ ML ++ KRI L H + P+D PV+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 323
Query: 276 DHELREKD 283
D +D
Sbjct: 324 DQSFESRD 331
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEINALKHISHQHICKL 71
+G G + V + TG+ VAIK K ED P +K EI LK + H ++ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYLHHLGYAH 129
+V + +V EYC L H ++R + G E ++ Q L AV + H H
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
RD+KPEN+L+ ++ +KL DFG A+ G + Y +PE++ G YG
Sbjct: 126 RDVKPENILITKHSVIKLCDFGF-ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 190 DVWSMGVMLYALLCG--FLPFDSDSIDQLY 217
DVW++G + LL G P SD +DQLY
Sbjct: 185 DVWAIGCVFAELLSGVPLWPGKSD-VDQLY 213
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCG--FLPFDSDSIDQLY--DKILSHFMPICTILIS--Q 380
G YG DVW++G + LL G P SD +DQLY K L +P + S Q
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-VDQLYLIRKTLGDLIPRHQQVFSTNQ 234
Query: 381 YFPTILLP 388
YF + +P
Sbjct: 235 YFSGVKIP 242
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMK---KATLGEDLPRVKL-EINALKHISHQHICKL 71
+G G FA V A T + VAIK +K ++ + + R L EI L+ +SH +I L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYLHHLGYAH 129
S+I +V ++ L+ I++ L S +A+ L + YLH H
Sbjct: 78 LDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
RDLKP N+LLD N LKL DFGL AK G + Y APE++ G + YG
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGL-AKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGV 194
Query: 190 DVWSMGVMLYALL--CGFLPFDSDSIDQLYDKILN--GKYTEPPW 230
D+W++G +L LL FLP DSD +DQL +I G TE W
Sbjct: 195 DMWAVGCILAELLLRVPFLPGDSD-LDQL-TRIFETLGTPTEEQW 237
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 327 GKQYYGSETDVWSMGVMLYALL--CGFLPFDSDSIDQL 362
G + YG D+W++G +L LL FLP DSD +DQL
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQL 222
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 412 QYYGSETDVWSMGVMLYALL--CGFLPFDSDSIDQLYDKILN--GKYTEPPW 459
+ YG D+W++G +L LL FLP DSD +DQL +I G TE W
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQL-TRIFETLGTPTEEQW 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 19 GGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS 78
G F KV A + T A K++ + E+L +EI+ L H +I KL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 79 SHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENV 137
++++++IE+C GG + ++E +R L E + + +Q L A+ YLH HRDLK N+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 138 LLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI----KGKQYYGSETDVWS 193
L + ++KL DFG+ AK + + G+P + APEV+ + Y + DVWS
Sbjct: 140 LFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 199
Query: 194 MGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQIVRSMLQVEPGKR 250
+G+ L + P + ++ KI + +P S N + ++ L+ R
Sbjct: 200 LGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
Query: 251 IKIQDLLGHNWVKM 264
LL H +V +
Sbjct: 260 WTTSQLLQHPFVTV 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 62/292 (21%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + T E VA+K ++ E +P L EI LK + H++I +L V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 75 IETSSHIFMVIEYCP----------GGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ + + +V E+C G+L IV ++F Q+L + + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV----------KSFLFQLLKGLGFCHS 119
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN-----YAAPEVI 179
HRDLKP+N+L++RN LKL DFGL A+ G + C S Y P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGL-ARAFG-----IPVRCYSAEVVTLWYRPPDVL 173
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLP-FDSDSIDQLYDKILN--GKYTEPPW------ 230
G + Y + D+WS G + L P F + +D +I G TE W
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 231 ---------------------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
++ R +++++L+ P +RI ++ L H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 36/274 (13%)
Query: 14 RTVGSGGFAKVKLATHVL----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV+L + TGE+VA+K +K + G + +K EI L+++ H++I
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 70 KLFQVI--ETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLG 126
K + + + I +++E+ P G L +++ + + ++ K+ + QI + YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNY-AAPEVIKGKQY 184
Y HRDL NVL++ +K+ DFGL E E ++ SP + APE + ++
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 194
Query: 185 YGSETDVWSMGVMLYALL--CGFLPFDSDS------------------IDQLYDKILNGK 224
Y + +DVWS GV L+ LL C DSDS + +L + + GK
Sbjct: 195 YIA-SDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 248
Query: 225 YTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
P P+ Q++R + +P R Q+L+
Sbjct: 249 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 36/274 (13%)
Query: 14 RTVGSGGFAKVKLATHVL----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F KV+L + TGE+VA+K +K + G + +K EI L+++ H++I
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 70 KLFQVI--ETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLG 126
K + + + I +++E+ P G L +++ + + ++ K+ + QI + YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNY-AAPEVIKGKQY 184
Y HRDL NVL++ +K+ DFGL E E ++ SP + APE + ++
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 206
Query: 185 YGSETDVWSMGVMLYALL--CGFLPFDSDS------------------IDQLYDKILNGK 224
Y + +DVWS GV L+ LL C DSDS + +L + + GK
Sbjct: 207 YIA-SDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 225 YTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
P P+ Q++R + +P R Q+L+
Sbjct: 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQV 74
VGSG + V + V +G K+A+K + + R E+ LKH+ H+++ L V
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 75 ------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+E + +++V G L++IV+ Q+L + + QIL + Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 176
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
HRDLKP N+ ++ + LK++DFGL + + + T Y APE++ +Y
Sbjct: 177 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNWMHYNMT 232
Query: 189 TDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEP------------------- 228
D+WS+G ++ LL G F +D I+QL +I+ T P
Sbjct: 233 VDIWSVGCIMAELLTGRTLFPGTDHINQL-QQIMRLTGTPPASVISRMPSHEARNYINSL 291
Query: 229 PWM------------SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS 272
P M +P + ++ ML ++ KRI + L H + P+D P S
Sbjct: 292 PQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDEPES 349
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 22/257 (8%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V T E VAIKI+ +++ ++ EI L +I + F
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
S+ +++++EY GG LD +++ L E R+IL + YLH HRD+K
Sbjct: 87 LKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 136 NVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGSETDVWS 193
NVLL ++KL DFG+ + ++Q++ + G+P + APEVIK + Y + D+WS
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLT---DTQIKRNXFVGTPFWMAPEVIK-QSAYDFKADIWS 201
Query: 194 MGVMLYALLCGFLPFDSD--------SIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
+G+ L G P +SD I + L G++++P ++ V + L
Sbjct: 202 LGITAIELAKGEPP-NSDLHPMRVLFLIPKNSPPTLEGQHSKP------FKEFVEACLNK 254
Query: 246 EPGKRIKIQDLLGHNWV 262
+P R ++LL H ++
Sbjct: 255 DPRFRPTAKELLKHKFI 271
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLP---RVKLEINAL 60
N + + R +G GGF +V TG+ A+K + K + GE L R+ L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
I + T + +++ GG+L H+ + E + R + +I+ +
Sbjct: 249 GDCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
++H+ +RDLKP N+LLD + ++++ D GL + + S G+ Y APEV++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQ 363
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPN 234
Y S D +S+G ML+ LL G PF D ID++ L P SP
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPE 420
Query: 235 SRQIVRSMLQVEPGKRI 251
R ++ +LQ + +R+
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPNSRQI 467
Y S D +S+G ML+ LL G PF D ID++ L P SP R +
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPELRSL 424
Query: 468 VRSMLQVEPGKRI 480
+ +LQ + +R+
Sbjct: 425 LEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLP---RVKLEINAL 60
N + + R +G GGF +V TG+ A+K + K + GE L R+ L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
I + T + +++ GG+L H+ + E + R + +I+ +
Sbjct: 249 GDCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
++H+ +RDLKP N+LLD + ++++ D GL + + S G+ Y APEV++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQ 363
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPN 234
Y S D +S+G ML+ LL G PF D ID++ L P SP
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPE 420
Query: 235 SRQIVRSMLQVEPGKRI 251
R ++ +LQ + +R+
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPNSRQI 467
Y S D +S+G ML+ LL G PF D ID++ L P SP R +
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPELRSL 424
Query: 468 VRSMLQVEPGKRI 480
+ +LQ + +R+
Sbjct: 425 LEGLLQRDVNRRL 437
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLP---RVKLEINAL 60
N + + R +G GGF +V TG+ A+K + K + GE L R+ L + +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
I + T + +++ GG+L H+ + E + R + +I+ +
Sbjct: 248 GDCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
++H+ +RDLKP N+LLD + ++++ D GL + + S G+ Y APEV++
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQ 362
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPN 234
Y S D +S+G ML+ LL G PF D ID++ L P SP
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPE 419
Query: 235 SRQIVRSMLQVEPGKRI 251
R ++ +LQ + +R+
Sbjct: 420 LRSLLEGLLQRDVNRRL 436
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPNSRQI 467
Y S D +S+G ML+ LL G PF D ID++ L P SP R +
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPELRSL 423
Query: 468 VRSMLQVEPGKRI 480
+ +LQ + +R+
Sbjct: 424 LEGLLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLP---RVKLEINAL 60
N + + R +G GGF +V TG+ A+K + K + GE L R+ L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
I + T + +++ GG+L H+ + E + R + +I+ +
Sbjct: 249 GDCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
++H+ +RDLKP N+LLD + ++++ D GL + + S G+ Y APEV++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQ 363
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPN 234
Y S D +S+G ML+ LL G PF D ID++ L P SP
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPE 420
Query: 235 SRQIVRSMLQVEPGKRI 251
R ++ +LQ + +R+
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF------DSDSIDQLYDKILNGKYTEPPWMSPNSRQI 467
Y S D +S+G ML+ LL G PF D ID++ L P SP R +
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPELRSL 424
Query: 468 VRSMLQVEPGKRI 480
+ +LQ + +R+
Sbjct: 425 LEGLLQRDVNRRL 437
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
VG G + V + TG VAIK ++ + + ++ + EI LK + H+++ L +V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
+ ++V E+ L D + L + + + QI++ + + H HRD+KP
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 135 ENVLLDRNQNLKLIDFGLC---AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
EN+L+ ++ +KL DFG A P + ++ T Y APE++ G YG DV
Sbjct: 153 ENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW----YRAPELLVGDVKYGKAVDV 208
Query: 192 WSMGVMLYALLCG--FLPFDSDSIDQLY-------------------DKILNG------K 224
W++G ++ + G P DSD IDQLY + + G K
Sbjct: 209 WAIGCLVTEMFMGEPLFPGDSD-IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 225 YTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 264
EP P +S + + L ++P KR +LL H++ +M
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 33/112 (29%)
Query: 414 YGSETDVWSMGVMLYALLCG--FLPFDSDSIDQLY-------------------DKILNG 452
YG DVW++G ++ + G P DSD IDQLY + + G
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSD-IDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 453 ------KYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
K EP P +S + + L ++P KR +LL H++ +M
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCG--FLPFDSDSIDQLY 363
G YG DVW++G ++ + G P DSD IDQLY
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD-IDQLY 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 62/292 (21%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + V A + T E VA+K ++ E +P L EI LK + H++I +L V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 75 IETSSHIFMVIEYCP----------GGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+ + + +V E+C G+L IV ++F Q+L + + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV----------KSFLFQLLKGLGFCHS 119
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN-----YAAPEVI 179
HRDLKP+N+L++RN LKL +FGL A+ G + C S Y P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGL-ARAFG-----IPVRCYSAEVVTLWYRPPDVL 173
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLP-FDSDSIDQLYDKILN--GKYTEPPW------ 230
G + Y + D+WS G + L P F + +D +I G TE W
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 231 ---------------------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
++ R +++++L+ P +RI ++ L H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
LER +G G F +V T + VAIKI+ +++ ++ EI L ++ K
Sbjct: 28 LER-IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
+ S +++++EY GG LD ++ E + ++IL + YLH HRD
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRD 145
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ--TSCGSPNYAAPEVIKGKQYYGSET 189
+K NVLL ++KL DFG+ + ++Q++ T G+P + APEVI+ + Y S+
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLT---DTQIKRNTFVGTPFWMAPEVIQ-QSAYDSKA 201
Query: 190 DVWSMGVMLYALLCGFLP-FDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG 248
D+WS+G+ L G P D + L+ N T + + ++ + + L +P
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPS 261
Query: 249 KRIKIQDLLGHNWV 262
R ++LL H ++
Sbjct: 262 FRPTAKELLKHKFI 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 30 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 84
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 85 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 304
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 281 PKQRISIPELLAHPYVQI 298
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK K G+ +L+I ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQGKAFKNRELQI--MRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGG--ELLDHIVE-RQRLGEKESRAFFRQILSAVA 120
+L +S ++ +V++Y P + H +Q L + + Q+ ++A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 121 YLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
Y+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE+I
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPELI 194
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNGKY 225
G Y S DVWS G +L LL G F DS +DQL + I +N Y
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 226 TE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
TE PW P + + +L+ P R+ + H++
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 28/276 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 58 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 112
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKM 264
+ Q +++ L+ +P +RI I +LL H +V++
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 309 PKQRISIPELLAHPYVQI 326
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 14 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 68
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 69 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 128 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 246
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 247 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 288
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 264
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 265 PKQRISIPELLAHPYVQI 282
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 10 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 64
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 65 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 123
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 124 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 242
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 243 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 284
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 260
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 261 PKQRISIPELLAHPYVQI 278
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHIS 64
L +Y VG G + V A G VA+K ++ E +P + EI+ LK +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYL 122
H +I L VI + + +V E+ L +++ + G ++S + + Q+L VA+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
H HRDLKP+N+L++ + LKL DFGL A+ G + Y AP+V+ G
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-------------------- 222
+ Y + D+WS+G + ++ G F + D KI +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 223 ----GKYTEPPWMS--PNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + PW S P Q ++ +ML +P KRI +D + H + K
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHIS 64
L +Y VG G + V A G VA+K ++ E +P + EI+ LK +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 65 HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKES--RAFFRQILSAVAYL 122
H +I L VI + + +V E+ L +++ + G ++S + + Q+L VA+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
H HRDLKP+N+L++ + LKL DFGL A+ G + Y AP+V+ G
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-------------------- 222
+ Y + D+WS+G + ++ G F + D KI +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 223 ----GKYTEPPWMS--PNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVK 263
+ + PW S P Q ++ +ML +P KRI +D + H + K
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V + VA+K +K+ T+ ++ E +K I H
Sbjct: 31 RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 88
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V ++V EY P G LLD++ E R+ + QI SA+ YL
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE +
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNT 207
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+YD + G + +P P +++R+
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRAC 267
Query: 243 LQVEPGKR 250
+ P R
Sbjct: 268 WKWSPADR 275
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMS 461
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+YD + G + +P
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCP 257
Query: 462 PNSRQIVRSMLQVEPGKR 479
P +++R+ + P R
Sbjct: 258 PKVYELMRACWKWSPADR 275
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 11 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 65
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 125 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 244 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 261
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 262 PKQRISIPELLAHPYVQI 279
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G+G +A V + TG VA+K +K + E P + EI+ +K + H++I +L+ V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKES-------RAFFRQILSAVAYLHHLGY 127
I T + + +V E+ L ++ + +G + F Q+L +A+ H
Sbjct: 72 IHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI 129
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLKP+N+L+++ LKL DFGL A+ G + + + Y AP+V+ G + Y +
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGL-ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 188 ETDVWSMGVMLYALLCGFLPF----DSDSIDQLYD------KILNGKYTEPPWMSPNSRQ 237
D+WS G +L ++ G F D + + ++D + L T+ P +PN +Q
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQ 248
Query: 238 ------------------------IVRSMLQVEPGKRIKIQDLLGHNW 261
+ +LQ+ P R+ + L H W
Sbjct: 249 RPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISH 65
R + L + +GSG F VKL G+ VA+K++K+ ++ ED E + +SH
Sbjct: 7 REEITLLKELGSGQFGVVKLGK--WKGQYDVAVKMIKEGSMSED--EFFQEAQTMMKLSH 62
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHH 124
+ K + V I++V EY G LL+++ + L + + +A+L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKG 181
+ HRDL N L+DR+ +K+ DFG+ L+ Q +S G+ ++APEV
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV---LDDQYVSSVGTKFPVKWSAPEVFHY 179
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIV 239
+ Y S++DVW+ G++++ + G +P+D + ++ K+ G P ++ ++ QI+
Sbjct: 180 FK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIM 238
Query: 240 RSMLQVEPGKRIKIQDLL 257
S P KR Q LL
Sbjct: 239 YSCWHELPEKRPTFQQLL 256
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
SAP Y Y S++DVW+ G++++ + G +P+D + ++ K+ G P ++
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS 231
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKD 504
++ QI+ S P KR Q LL PLREKD
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLLS--------SIEPLREKD 266
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 131/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK K G+ +L+I ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQGKAFKNRELQI--MRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 131/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK K G+ +L+I ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQGKAFKNRELQI--MRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 13/248 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +K+ ++ ED E + +SH + +L+ V
Sbjct: 35 IGSGQFGLVHLG-YWLNKDKVAIKTIKEGSMSED--DFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 151
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 207
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK 249
WS GV+++ + G +P+++ S ++ + I G + +P S + QI+ + P
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 267
Query: 250 RIKIQDLL 257
R LL
Sbjct: 268 RPAFSRLL 275
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 260
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 261 WKERPEDRPAFSRLL 275
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 241
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++L +G G A V H TG+ AIK+ + + E LK ++H++I
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 70 KLFQVIE--TSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQILSAVAYLHH 124
KLF + E T+ H +++E+CP G L + E L E E R ++ + +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 125 LGYAHRDLKPENVLL----DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
G HR++KP N++ D KL DFG + E + Q + G+ Y P++ +
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFVSLYGTEEYLHPDMYE 188
Query: 181 -------GKQYYGSETDVWSMGVMLYALLCGFLPF 208
++ YG+ D+WS+GV Y G LPF
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPF 354
+K ++ YG+ D+WS+GV Y G LPF
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPF 437
++ YG+ D+WS+GV Y G LPF
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 58 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 112
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 332
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 309 PKQRISIPELLAHPYVQI 326
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++L +G G A V H TG+ AIK+ + + E LK ++H++I
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 70 KLFQVIE--TSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQILSAVAYLHH 124
KLF + E T+ H +++E+CP G L + E L E E R ++ + +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 125 LGYAHRDLKPENVLL----DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK 180
G HR++KP N++ D KL DFG + E + Q G+ Y P++ +
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFVXLYGTEEYLHPDMYE 188
Query: 181 -------GKQYYGSETDVWSMGVMLYALLCGFLPF 208
++ YG+ D+WS+GV Y G LPF
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPF 354
+K ++ YG+ D+WS+GV Y G LPF
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 411 KQYYGSETDVWSMGVMLYALLCGFLPF 437
++ YG+ D+WS+GV Y G LPF
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 58 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 112
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + S ++ S G+ NY PE IK
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 332
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 309 PKQRISIPELLAHPYVQI 326
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 30/284 (10%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISH 65
Y + + +GSGG +KV + EK I +K L E L + EI L +
Sbjct: 30 YSILKQIGSGGSSKV----FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-Q 84
Query: 66 QH---ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL 122
QH I +L+ T +I+MV+E C +L + +++ + E +++++ +L AV +
Sbjct: 85 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIKG 181
H G H DLKP N L+ + LKLIDFG+ + + ++ S G+ NY PE IK
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 182 ----------KQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPP 229
K ++DVWS+G +LY + G PF + I +L+ I E P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 230 WMSPNSRQ-IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ Q +++ L+ +P +RI I +LL H +V++ + +PV+
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI--QTHPVN 304
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 419 DVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEPPWMSPNSRQ-IVRSMLQVE 475
DVWS+G +LY + G PF + I +L+ I E P + Q +++ L+ +
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 476 PGKRIKIQDLLGHNWVKM 493
P +RI I +LL H +V++
Sbjct: 281 PKQRISIPELLAHPYVQI 298
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 68
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+++ +K++DFG+ S QT+ G+ Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 216
E +G + +DV+S+G +LY +L G PF DS D +
Sbjct: 189 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 390 KVGQVINLLRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 445
V Q ++ +A L + + +DV+S+G +LY +L G PF DS D +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 333 SETDVWSMGVMLYALLCGFLPFDSDSIDQL 362
+ +DV+S+G +LY +L G PF DS D +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFR 187
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 188 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK----VAIKIMKKATLGEDLPRVKLEINALK 61
R +L +T+G G F KV AT L G VA+K++K+ +L + E N LK
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----------------E 105
++H H+ KL+ + +++EY G L + E +++G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 106 KESRA--------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE 157
+ RA F QI + YL + HRDL N+L+ + +K+ DFGL ++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGL-SRDV 200
Query: 158 GGLESQLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID 214
+S ++ S G + A E + Y +++DVWS GV+L+ ++ G P+ +
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 215 QLYDKILNGKYTEPPWMSPNSRQIVRSMLQV---EPGKRIKIQDL 256
+L++ + G E P S ++ R MLQ EP KR D+
Sbjct: 260 RLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
Y +++DVWS GV+L+ ++ G P+ ++L++ + G E P S ++ R ML
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLML 286
Query: 473 QV---EPGKRIKIQDL 485
Q EP KR D+
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 68
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+L+ +K++DFG+ S QT+ G+ Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
E +G + +DV+S+G +LY +L G PF DS
Sbjct: 189 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 390 KVGQVINLLRSAIVLCSAPSSKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 441
V Q ++ +A L + + +DV+S+G +LY +L G PF DS
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 211
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 271
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 272 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 200
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 260
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 261 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 193
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 253
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 254 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK----VAIKIMKKATLGEDLPRVKLEINALK 61
R +L +T+G G F KV AT L G VA+K++K+ +L + E N LK
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----------------E 105
++H H+ KL+ + +++EY G L + E +++G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 106 KESRA--------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE 157
+ RA F QI + YL + HRDL N+L+ + +K+ DFGL ++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL-SRDV 200
Query: 158 GGLESQLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID 214
+S ++ S G + A E + Y +++DVWS GV+L+ ++ G P+ +
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 215 QLYDKILNGKYTEPPWMSPNSRQIVRSMLQV---EPGKRIKIQDL 256
+L++ + G E P S ++ R MLQ EP KR D+
Sbjct: 260 RLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
Y +++DVWS GV+L+ ++ G P+ ++L++ + G E P S ++ R ML
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLML 286
Query: 473 QV---EPGKRIKIQDL 485
Q EP KR D+
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 204
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 80
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 196
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 256
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 257 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 204
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 188 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 91 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 149
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 207
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 208 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 267
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 268 IDADSRPKFRELI 280
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 265
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 266 WMIDADSRPKFRELI 280
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 205
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 265
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 266 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK----VAIKIMKKATLGEDLPRVKLEINALK 61
R +L +T+G G F KV AT L G VA+K++K+ +L + E N LK
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----------------E 105
++H H+ KL+ + +++EY G L + E +++G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 106 KESRA--------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE 157
+ RA F QI + YL + HRDL N+L+ + +K+ DFGL ++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL-SRDV 200
Query: 158 GGLESQLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID 214
+S ++ S G + A E + Y +++DVWS GV+L+ ++ G P+ +
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 215 QLYDKILNGKYTEPPWMSPNSRQIVRSMLQV---EPGKRIKIQDL 256
+L++ + G E P S ++ R MLQ EP KR D+
Sbjct: 260 RLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
Y +++DVWS GV+L+ ++ G P+ ++L++ + G E P S ++ R ML
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLML 286
Query: 473 QV---EPGKRIKIQDL 485
Q EP KR D+
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +++ + E+ E + +SH + +L+ V
Sbjct: 15 IGSGQFGLVHLG-YWLNKDKVAIKTIREGAMSEE--DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAA 131
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 132 RNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 187
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK 249
WS GV+++ + G +P+++ S ++ + I G + +P S + QI+ + P
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 250 RIKIQDLL 257
R LL
Sbjct: 248 RPAFSRLL 255
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 240
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 241 WKERPEDRPAFSRLL 255
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 192
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 188 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 200
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 260
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 261 IDADSRPKFRELI 273
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 258
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXIC-SRYYRAPE 226
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +++ + E+ E + +SH + +L+ V
Sbjct: 13 IGSGQFGLVHLG-YWLNKDKVAIKTIREGAMSEE--DFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 129
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 130 RNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 185
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
WS GV+++ + G +P+++ S ++ + I G P ++
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------------- 229
Query: 251 IKIQDLLGHNWVKMGPEDNPVSFRPDHELRE 281
+ ++ H W K PED P R +L E
Sbjct: 230 -HVYQIMNHCW-KERPEDRPAFSRLLRQLAE 258
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 238
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 239 WKERPEDRPAFSRLL 253
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +++ + E+ E + +SH + +L+ V
Sbjct: 16 IGSGQFGLVHLG-YWLNKDKVAIKTIREGAMSEE--DFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 133 RNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 188
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK 249
WS GV+++ + G +P+++ S ++ + I G + +P S + QI+ + P
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 248
Query: 250 RIKIQDLL 257
R LL
Sbjct: 249 RPAFSRLL 256
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 241
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 242 WRERPEDRPAFSRLL 256
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 37 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 97 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 156 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 216 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 274
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 275 KCWAYDPSRRPRFTEL 290
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 66 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 185 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 243
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 244 KCWAYDPSRRPRFTEL 259
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 81
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 197
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 257
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 258 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +++ + E+ E + +SH + +L+ V
Sbjct: 18 IGSGQFGLVHLG-YWLNKDKVAIKTIREGAMSEE--DFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 134
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 135 RNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 190
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK 249
WS GV+++ + G +P+++ S ++ + I G + +P S + QI+ + P
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 250
Query: 250 RIKIQDLL 257
R LL
Sbjct: 251 RPAFSRLL 258
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 243
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 244 WRERPEDRPAFSRLL 258
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 68
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+++ +K++DFG+ S QT+ G+ Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
E +G + +DV+S+G +LY +L G PF DS
Sbjct: 189 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 469
+ Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMR 253
Query: 470 SMLQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 254 KCWMIDADSRPKFRELI 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 74 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 193 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 251
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 252 KCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 12 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 72 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 130
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 191 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 249
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 250 KCWAYDPSRRPRFTEL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 11 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 71 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 129
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 190 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 248
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 249 KCWAYDPSRRPRFTEL 264
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 38/282 (13%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G + +V A +T E VAIK ++ E +P + E++ LK + H++I +L V
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKP 134
I + + ++ EY +L ++ + + + ++F Q+++ V + H HRDLKP
Sbjct: 102 IHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 135 ENVLL---DRNQN--LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSET 189
+N+LL D ++ LK+ DFGL A+ G Q + Y PE++ G ++Y +
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGL-ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSV 219
Query: 190 DVWSMGVMLYALLCGFLPFDSDS-IDQLY----------DKILNGKYTEPPWMS--PNSR 236
D+WS+ + +L F DS IDQL+ D G P W P R
Sbjct: 220 DIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFR 279
Query: 237 -----------------QIVRSMLQVEPGKRIKIQDLLGHNW 261
++ +ML+++P KRI ++ L H +
Sbjct: 280 GKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+GSG F V L + L +KVAIK +++ + E+ E + +SH + +L+ V
Sbjct: 15 IGSGQFGLVHLG-YWLNKDKVAIKTIREGAMSEE--DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDLKP 134
+ I +V E+ G L D++ ++ L E+ + +AYL HRDL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 131
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSETDV 191
N L+ NQ +K+ DFG+ L+ Q +S G+ +A+PEV + Y S++DV
Sbjct: 132 RNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDV 187
Query: 192 WSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
WS GV+++ + G +P+++ S ++ + I G P ++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------------- 231
Query: 251 IKIQDLLGHNWVKMGPEDNPVSFRPDHELRE 281
+ ++ H W K PED P R +L E
Sbjct: 232 -HVYQIMNHCW-KERPEDRPAFSRLLRQLAE 260
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y S++DVWS GV+++ + G +P+++ S ++ + I G + +P S + QI+
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 240
Query: 472 LQVEPGKRIKIQDLL 486
+ P R LL
Sbjct: 241 WKERPEDRPAFSRLL 255
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILSHF 370
Y S++DVWS GV+++ + G +P+++ S ++ + I + F
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQ 73
+G G F + TH TGE + +K + + E+ R L E+ ++ + H ++ K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 74 VIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-AFFRQILSAVAYLHHLGYAHRDL 132
V+ + + EY GG L I R +F + I S +AYLH + HRDL
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 133 KPENVLLDRNQNLKLIDFGLC-------AKPEGGLES-------QLQTSCGSPNYAAPEV 178
N L+ N+N+ + DFGL +PE GL S + T G+P + APE+
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPE-GLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-----GKYTEPPWMSP 233
I G+ Y + DV+S G++L ++ G + D D + + D LN +Y PP P
Sbjct: 194 INGRS-YDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGFLDRYC-PPNCPP 250
Query: 234 NSRQIVRSMLQVEPGKR 250
+ I ++P KR
Sbjct: 251 SFFPITVRCCDLDPEKR 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR--------------LGEK 106
H+ H++I L + ++ EYC G+LL+ + + R L +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 107 ESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT 166
+ F Q+ +A+L HRD+ NVLL K+ DFGL ++
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 167 SCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
+ P + APE I Y ++DVWS G++L+ + G P+ ++ + K++
Sbjct: 225 NARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 225 Y--TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
Y +P + N I+++ +EP R Q +
Sbjct: 284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 302
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 303 CWALEPTHRPTFQQI 317
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 25/274 (9%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKE-------SRA--- 110
H+ H++I L + ++ EYC G+LL+ + + R+ E + S A
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR 164
Query: 111 ----FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT 166
F Q+ +A+L HRD+ NVLL K+ DFGL ++
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 167 SCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
+ P + APE I Y ++DVWS G++L+ + G P+ ++ + K++
Sbjct: 225 NARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 225 Y--TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
Y +P + N I+++ +EP R Q +
Sbjct: 284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 302
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 303 CWALEPTHRPTFQQI 317
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 226
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++VIEY G LLD + + E + R QI
Sbjct: 73 EKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIA 124
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 184
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 185 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 243 S-----------------LHDLMCQCWRK-DPEERPT 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 104
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 220
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 280
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 281 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 68
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+++ +K++DFG+ S QT+ G+ Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
E +G + +DV+S+G +LY +L G PF DS
Sbjct: 189 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 112
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 228
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 288
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 289 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 85
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+++ +K++DFG+ S QT+ G+ Y +P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
E +G + +DV+S+G +LY +L G PF DS
Sbjct: 206 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP---RVKLEINALKH 62
L ++Y L +G GG ++V LA + VA+K+++ A L D R + E
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAA 68
Query: 63 ISHQHICKLFQVIETSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++H I ++ E + ++V+EY G L D + + K + A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC--GSPNYAAP 176
+ + H G HRD+KP N+++ +K++DFG+ S QT+ G+ Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
E +G + +DV+S+G +LY +L G PF DS
Sbjct: 189 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 15/216 (6%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SH 65
++ Y L R +G G +++V A ++ EKV +KI+K ++K EI L+++
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN----KIKREIKILENLRGG 91
Query: 66 QHICKLFQVIE--TSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH 123
+I L +++ S +V E+ + Q L + + R + +IL A+ Y H
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 124 HLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+G HRD+KP NV++D ++ L+LID+GL G E ++ + S + PE++
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA--SRYFKGPELLVDY 206
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 155
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 271
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 331
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 332 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
Y + +G+G F V A +GE VAIK + +D E+ ++ + H +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNIV 114
Query: 70 KLFQVIETSS------HIFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSA 118
+L +S ++ +V++Y P E + + +Q L + + Q+ +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+H G HRD+KP+N+LLD + LKL DFG + G E + C S Y APE
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYIC-SRYYRAPE 230
Query: 178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKI-------------LNG 223
+I G Y S DVWS G +L LL G F DS +DQL + I +N
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 290
Query: 224 KYTE--------PPWMS-------PNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
YTE PW P + + +L+ P R+ + H++
Sbjct: 291 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 12/225 (5%)
Query: 9 QYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISHQ 66
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHHL 125
+I LF T+ + +V ++C G L H+ + K+ RQ + YLH
Sbjct: 81 NIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+ +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 185 --YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 226
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 283 DDDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGV 342
+D+ +K+ D + WS +++ + ++ + Q Y ++DV++ G+
Sbjct: 155 EDNTVKI-GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 343 MLYALLCGFLPFDS-DSIDQLYDKI 366
+LY L+ G LP+ + ++ DQ+ + +
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEMV 238
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 455
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 44/261 (16%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV- 74
+GSGGF +V A H + G+ IK +K + + E+ AL + H +I
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCW 73
Query: 75 ------IETSSH---------IFMVIEYCPGGELLDHIVERQRLGEKESRAF----FRQI 115
ETSS +F+ +E+C G L+ +E++R GEK + F QI
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG-TLEQWIEKRR-GEKLDKVLALELFEQI 131
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
V Y+H +RDLKP N+ L + +K+ DFGL + + + S G+ Y +
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN--DGKRXRSKGTLRYMS 189
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALL--CG--------FLPFDSDSIDQLYDK----IL 221
PE I Q YG E D++++G++L LL C F I ++DK +L
Sbjct: 190 PEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLL 248
Query: 222 NGKYTEPPWMSPNSRQIVRSM 242
++ P PN+ +I+R++
Sbjct: 249 QKLLSKKPEDRPNTSEILRTL 269
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 410 SKQYYGSETDVWSMGVMLYALL--CG--------FLPFDSDSIDQLYDK----ILNGKYT 455
S Q YG E D++++G++L LL C F I ++DK +L +
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLS 253
Query: 456 EPPWMSPNSRQIVRSM 471
+ P PN+ +I+R++
Sbjct: 254 KKPEDRPNTSEILRTL 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++VIEY G LLD + RL + A QI S +AY
Sbjct: 73 EKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 129
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 190 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 243
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 244 -------------LHDLMCQCWRK-DPEERPT 261
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
D+ +Y +G G + V A + +VAIK + R EI L
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 64 SHQHICKLFQVI-----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
H++I + +I E +++V G L +++ Q L F QIL
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAP 176
+ Y+H HRDLKP N+LL+ +LK+ DFGL A P+ L + Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKIL 221
E++ + Y D+WS+G +L +L F +DQL + I+
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 222 NGKY----------TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM- 264
N K + PW + PN+ ++ ML P KRI+++ L H +++
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
Query: 265 -GPEDNPVS---FRPDHEL 279
P D P++ F+ D EL
Sbjct: 337 YDPSDEPIAEAPFKFDMEL 355
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 9 QYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISHQ 66
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHHL 125
+I LF T + +V ++C G L H+ + K+ RQ + YLH
Sbjct: 69 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+ +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 185 --YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 226
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 232
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 455
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 232
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 283 DDDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGV 342
+D+ +K+ D + WS +++ + ++ + Q Y ++DV++ G+
Sbjct: 143 EDNTVKI-GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 201
Query: 343 MLYALLCGFLPFDS-DSIDQLYDKI 366
+LY L+ G LP+ + ++ DQ+ + +
Sbjct: 202 VLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 12/226 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + K+ RQ + YLH
Sbjct: 80 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+ +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 184 Y--YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 226
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 283 DDDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGV 342
+D+ +K+ D + WS +++ + ++ + Q Y ++DV++ G+
Sbjct: 155 EDNTVKI-GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 343 MLYALLCGFLPFDS-DSIDQLYDKI 366
+LY L+ G LP+ + ++ DQ+ + +
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEMV 238
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYT 455
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + + G +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 82 RLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 198
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 259 IDADSRPKFRELI 271
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 257 WMIDADSRPKFRELI 271
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ N +KL DFGL E + + APE I +
Sbjct: 508 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 568 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 626
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 627 KCWAYDPSRRPRFTEL 642
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 65
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 66 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 117
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 118 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 177
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 178 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 235
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 236 S-----------------LHDLMCQCWRK-EPEERPT 254
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRA-------- 110
H+ H++I L + ++ EYC G+LL+ + + L +++ R
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS 170
F Q+ +A+L HRD+ NVLL K+ DFGL ++ +
Sbjct: 165 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 171 P-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--T 226
P + APE I Y ++DVWS G++L+ + G P+ ++ + K++ Y
Sbjct: 225 PVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 283
Query: 227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
+P + N I+++ +EP R Q +
Sbjct: 284 QPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 298
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 299 CWALEPTHRPTFQQI 313
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 37 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRA-------- 110
H+ H++I L + ++ EYC G+LL+ + + L +++ R
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS 170
F Q+ +A+L HRD+ NVLL K+ DFGL ++ +
Sbjct: 157 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 171 P-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--T 226
P + APE I Y ++DVWS G++L+ + G P+ ++ + K++ Y
Sbjct: 217 PVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 275
Query: 227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
+P + N I+++ +EP R Q +
Sbjct: 276 QPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 290
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 291 CWALEPTHRPTFQQI 305
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 38/319 (11%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
D+ +Y + +G G + V A + +VAIK + R EI L
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGEL---LDHIVERQRLGEKESRAFFRQILSAVA 120
H+++ + ++ S+ M Y + L +++ Q+L F QIL +
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEV 178
Y+H HRDLKP N+L++ +LK+ DFGL A PE L + Y APE+
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNG 223
+ + Y D+WS+G +L +L F +DQL + I+N
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM 278
Query: 224 KY----------TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--G 265
K T+ W + P S ++ ML P KRI +++ L H +++
Sbjct: 279 KARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYD 338
Query: 266 PEDNPVSFRPDHELREKDD 284
P D PV+ P E DD
Sbjct: 339 PTDEPVAEEPFTFAMELDD 357
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 199
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 260 IDADSRPKFRELI 272
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 37/277 (13%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHICKLFQV 74
+G G + V H +G+ +A+K ++ ++ ++ ++++ + S +I + +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 75 IETSSHIFMVIEYCPGG---------ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+ ++ +E +LD ++ + LG + L+ V L+HL
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG--------KITLATVKALNHL 141
Query: 126 G----YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI-- 179
HRD+KP N+LLDR+ N+KL DFG+ + + C Y APE I
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP--YMAPERIDP 199
Query: 180 -KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM------- 231
+Q Y +DVWS+G+ LY L G P+ + ++D++ +PP +
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSEERE 257
Query: 232 -SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE 267
SP+ V L + KR K ++LL H ++ M E
Sbjct: 258 FSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-------- 460
+S+Q Y +DVWS+G+ LY L G P+ + ++D++ +PP +
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSEEREF 258
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE 496
SP+ V L + KR K ++LL H ++ M E
Sbjct: 259 SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 327 GKQYYGSETDVWSMGVMLYALLCGFLPF 354
+Q Y +DVWS+G+ LY L G P+
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLVGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+GV++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
Y D+WS+GV++ ++ G + F +D IDQ ++K++ T P + VR+ +
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 473 QVEP 476
+ P
Sbjct: 261 ENRP 264
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 238
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 239 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 290
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 351 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 409 S-----------------LHDLMCQCWRKE-PEERPT 427
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K I H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKIRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E + R QI
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIA 124
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 185 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 243 S-----------------LHDLMCQCWRK-DPEERPT 261
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 238
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 239 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 290
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 351 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 409 S-----------------LHDLMCQCWRKE-PEERPT 427
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA-LKHISHQHICKLFQV 74
+GSG +V TG +A+K M+++ E+ R+ ++++ LK +I + F
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL----GYAHR 130
T++ +F+ +E G + + +R + G R + ++ V L++L G HR
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK----GKQYYG 186
D+KP N+LLD +KL DFG+ + + S G Y APE I K Y
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVD--DKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 187 SETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPPWM------SPNSRQIV 239
DVWS+G+ L L G P+ + D ++ K+L EPP + S + + V
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ---EEPPLLPGHMGFSGDFQSFV 264
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVK 263
+ L + KR K LL H+++K
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIK 288
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 410 SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPPWM------SP 462
+K Y DVWS+G+ L L G P+ + D ++ K+L EPP + S
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ---EEPPLLPGHMGFSG 258
Query: 463 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+ + V+ L + KR K LL H+++K
Sbjct: 259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLP 268
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 269 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 329 FKFDMEL 335
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R LE+ +G+G F +V +AT+ KVA+K MK ++ + E N +K + H
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHD 243
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA----FFRQILSAVAYL 122
+ KL V+ T I+++ E+ G LLD + + G K+ F QI +A++
Sbjct: 244 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
Y HRDL+ N+L+ + K+ DFGL E + + + + APE I
Sbjct: 301 EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN-- 358
Query: 183 QYYGS---ETDVWSMGVMLYALLC-GFLPF 208
+GS ++DVWS G++L ++ G +P+
Sbjct: 359 --FGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 27/276 (9%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QRLG 104
H+ H++I L + ++ EYC G+LL+ + + ++L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 105 EKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
++ F Q+ +A+L HRD+ NVLL K+ DFGL +
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN 222
+ + P + APE I Y ++DVWS G++L+ + G P+ ++ + K++
Sbjct: 225 KGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
Query: 223 GKY--TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
Y +P + N I+++ +EP R Q +
Sbjct: 284 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 304
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 305 CWALEPTHRPTFQQI 319
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 69
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 70 EKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL-------KGETGKYLRLPQLVDMSAQIA 121
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 122 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAP 181
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 182 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 239
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 240 S-----------------LHDLMCQCWRKE-PEERPT 258
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R LE+ +G+G F +V +AT+ KVA+K MK ++ + E N +K + H
Sbjct: 14 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHD 70
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA----FFRQILSAVAYL 122
+ KL V+ T I+++ E+ G LLD + + G K+ F QI +A++
Sbjct: 71 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
Y HRDL+ N+L+ + K+ DFGL E + + + + APE I
Sbjct: 128 EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN-- 185
Query: 183 QYYGS---ETDVWSMGVMLYALLC-GFLPF 208
+GS ++DVWS G++L ++ G +P+
Sbjct: 186 --FGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 69
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 70 EKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL-------KGETGKYLRLPQLVDMSAQIA 121
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 122 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 181
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 182 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 239
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 240 S-----------------LHDLMCQCWRKE-PEERPT 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 83 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 199
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 260 IDADSRPKFRELI 272
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+R
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ +KL DFGL E + + APE I +
Sbjct: 128 ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 188 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 149 DLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLP 268
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 269 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 329 FKFDMEL 335
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 61
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V EY G LLD + RL + A QI S +AY
Sbjct: 62 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 118
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 119 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 179 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 232
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 233 -------------LHDLMCQCWRK-DPEERPT 250
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 84 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 200
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 261 IDADSRPKFRELI 273
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 122/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 62
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I +V EY G LLD + + E+ + R QI
Sbjct: 63 EKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 114
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 115 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 174
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 175 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 232
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 233 S-----------------LHDLMCQCWRKE-PEERPT 251
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 63
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V EY G LLD + RL + A QI S +AY
Sbjct: 64 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 120
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 121 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 181 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 234
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 235 -------------LHDLMCQCWRK-DPEERPT 252
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 85 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 201
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 262 IDADSRPKFRELI 274
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 260 WMIDADSRPKFRELI 274
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 56 EINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----EKESRAF 111
EI KH+ H++I + + I + +E PGG L + R + G +++ F
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGF 126
Query: 112 F-RQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCG 169
+ +QIL + YLH HRD+K +NVL++ LK+ DFG +K G+ +T G
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG-TSKRLAGINPCTETFTG 185
Query: 170 SPNYAAPEVI-KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ--LYDKILNGKYT 226
+ Y APE+I KG + YG D+WS+G + + G PF Q ++ + +
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
Query: 227 E-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 264
E P MS ++ + + +P KR DLL ++K+
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ--LYDKILNGKYTE-PPWMSPNSRQIVRS 470
YG D+WS+G + + G PF Q ++ + + E P MS ++ +
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261
Query: 471 MLQVEPGKRIKIQDLLGHNWVKM 493
+ +P KR DLL ++K+
Sbjct: 262 CFEPDPDKRACANDLLVDEFLKV 284
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 82 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 198
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 259 IDADSRPKFRELI 271
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 257 WMIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 199
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 260 IDADSRPKFRELI 272
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 96 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKS 213
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 214 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 273
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 274 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 333
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 334 FKFDMEL 340
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 96 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 213
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 214 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 273
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 274 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 333
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 334 FKFDMEL 340
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 97 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 154
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 155 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 214
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 215 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 274
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 275 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 334
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 335 FKFDMEL 341
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 88 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 145
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 146 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 205
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 206 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 265
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 266 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 325
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 326 FKFDMEL 332
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 75 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 133
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 191
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 251
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 252 IDADSRPKFRELI 264
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 249
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 250 WMIDADSRPKFRELI 264
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
L +T+G G F V L + G KVA+K +K + E + + + H ++ +L
Sbjct: 10 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA---EASVMTQLRHSNLVQL 64
Query: 72 FQVI-ETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYA 128
VI E +++V EY G L+D++ R R LG F + A+ YL +
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIKGKQYYGS 187
HRDL NVL+ + K+ DFGL + S Q + P + APE ++ K+ + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKK-FST 178
Query: 188 ETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQV 245
++DVWS G++L+ + G +P+ + + ++ G K P P +++++ +
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL 238
Query: 246 EPGKR 250
+ R
Sbjct: 239 DAAMR 243
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 89 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 207 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 266
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 267 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 326
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 327 FKFDMEL 333
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 78 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLV 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 194
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 195 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 254
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 255 IDADSRPKFRELI 267
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 252
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 253 WMIDADSRPKFRELI 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKA-TLGEDLPRVKLEINALKH 62
D+ ++Y + T+G+G + V A LTG++VAIK + A + + R E+ LKH
Sbjct: 51 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKH 110
Query: 63 ISHQHICKLFQVIETS------SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL 116
H +I + ++ + +++V++ +L I Q L + R F Q+L
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDF----GLCAKPEGGLESQ--LQTSCGS 170
+ Y+H HRDLKP N+L++ N LK+ DF GLC P E Q + +
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA---EHQYFMTEYVAT 226
Query: 171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC 203
Y APE++ Y D+WS+G + +L
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 89 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 207 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLP 266
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 267 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 326
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 327 FKFDMEL 333
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLVGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+GV++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
Y D+WS+GV++ ++ G + F +D IDQ ++K++ T P + VR+ +
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 473 QVEP 476
+ P
Sbjct: 261 ENRP 264
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 106 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 164
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 222
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 223 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 282
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 283 IDADSRPKFRELI 295
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 280
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 281 WMIDADSRPKFRELI 295
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 122/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E + R QI
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIA 124
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 185 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 243 S-----------------LHDLMCQCWRK-DPEERPT 261
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R L + +G+G F +V + + KVA+K +K T+ + E N +K + H
Sbjct: 12 RESIKLVKRLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMS--VQAFLEEANLMKTLQHD 68
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIV--ERQRLGEKESRAFFRQILSAVAYLHH 124
+ +L+ V+ I+++ EY G LLD + E ++ + F QI +AY+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
Y HRDL+ NVL+ + K+ DFGL E + + + + APE I
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG-C 187
Query: 185 YGSETDVWSMGVMLYALLC-GFLPF 208
+ ++DVWS G++LY ++ G +P+
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 56 EINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLG----EKESRAF 111
EI KH+ H++I + + I + +E PGG L + R + G +++ F
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGF 112
Query: 112 F-RQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCG 169
+ +QIL + YLH HRD+K +NVL++ LK+ DFG +K G+ +T G
Sbjct: 113 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG-TSKRLAGINPCTETFTG 171
Query: 170 SPNYAAPEVI-KGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ--LYDKILNGKYT 226
+ Y APE+I KG + YG D+WS+G + + G PF Q ++ + +
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
Query: 227 E-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
E P MS ++ + + +P KR DLL ++K
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQ--LYDKILNGKYTE-PPWMSPNSRQIVRS 470
YG D+WS+G + + G PF Q ++ + + E P MS ++ +
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 247
Query: 471 MLQVEPGKRIKIQDLLGHNWVK 492
+ +P KR DLL ++K
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V EY G LLD + RL + A QI S +AY
Sbjct: 73 EKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 129
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 190 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 243
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 244 -------------LHDLMCQCWRK-DPEERPT 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
L +T+G G F V L + G KVA+K +K + E + + + H ++ +L
Sbjct: 25 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA---EASVMTQLRHSNLVQL 79
Query: 72 FQVI-ETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYA 128
VI E +++V EY G L+D++ R R LG F + A+ YL +
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIKGKQYYGS 187
HRDL NVL+ + K+ DFGL + S Q + P + APE ++ K+ + +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKK-FST 193
Query: 188 ETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQV 245
++DVWS G++L+ + G +P+ + + ++ G K P P +++++ +
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL 253
Query: 246 EPGKR 250
+ R
Sbjct: 254 DAAMR 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 268
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 269 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 329 FKFDMEL 335
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 83 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 199
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 260 IDADSRPKFRELI 272
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 238
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 239 EKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 290
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 351 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 409 S-----------------LHDLMCQCWRKE-PEERPT 427
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 57/301 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + G VA+K + + + R E+ LK ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L ++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGMG-YA 203
Query: 187 SETDVWSMGVMLYALLCGFLPFD-SDSIDQLYDKILNG---------------------- 223
+ D+WS+G ++ L+ G + F +D IDQ ++K++
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQ-WNKVIEQLGTPSAEFMAALQPTVRNYVEN 262
Query: 224 -------KYTE--PPWMSPN-----------SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
K+ E P W+ P+ +R ++ ML ++P KRI + + L H ++
Sbjct: 263 RPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
Query: 264 M 264
+
Sbjct: 323 V 323
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 200
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 261 IDADSRPKFRELI 273
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 200
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 261 IDADSRPKFRELI 273
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 87 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 145
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 203
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 204 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 263
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 264 IDADSRPKFRELI 276
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 261
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 262 WMIDADSRPKFRELI 276
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKA-TLGEDLPRVKLEINALKH 62
D+ ++Y + T+G+G + V A LTG++VAIK + A + + R E+ LKH
Sbjct: 50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKH 109
Query: 63 ISHQHICKLFQVIETS------SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL 116
H +I + ++ + +++V++ +L I Q L + R F Q+L
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDF----GLCAKPEGGLESQ--LQTSCGS 170
+ Y+H HRDLKP N+L++ N LK+ DF GLC P E Q + +
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA---EHQYFMTEYVAT 225
Query: 171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC 203
Y APE++ Y D+WS+G + +L
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 321
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E+ + R QI
Sbjct: 322 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIA 373
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 374 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 433
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 434 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 491
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 492 S-----------------LHDLMCQCWRKE-PEERPT 510
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 204
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 265 IDADSRPKFRELI 277
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
L +T+G G F V L + G KVA+K +K + E + + + H ++ +L
Sbjct: 197 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQL 251
Query: 72 FQVI-ETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYA 128
VI E +++V EY G L+D++ R R LG F + A+ YL +
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIKGKQYYGS 187
HRDL NVL+ + K+ DFGL + S Q + P + APE ++ K+ + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKK-FST 365
Query: 188 ETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQV 245
++DVWS G++L+ + G +P+ + + ++ G K P P ++++ +
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHL 425
Query: 246 EPGKR---IKIQDLLGH 259
+ R +++++ L H
Sbjct: 426 DAATRPTFLQLREQLEH 442
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V+EY G LLD + RL + A QI S +AY
Sbjct: 73 EKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 129
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 190 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 243
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 244 -------------LHDLMCQCWRK-DPEERPT 261
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 57/274 (20%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF--- 72
+GSGGF +V A H + G+ I+ +K + + E+ AL + H +I
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCW 74
Query: 73 -----------QVIETSSH---------------IFMVIEYCPGGELLDHIVERQRLGEK 106
+E+S + +F+ +E+C G L+ +E++R GEK
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG-TLEQWIEKRR-GEK 132
Query: 107 ESRAF----FRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
+ F QI V Y+H HRDLKP N+ L + +K+ DFGL + +
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN--DG 190
Query: 163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL--CG--------FLPFDSDS 212
+ S G+ Y +PE I Q YG E D++++G++L LL C F
Sbjct: 191 KRTRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI 249
Query: 213 IDQLYDK----ILNGKYTEPPWMSPNSRQIVRSM 242
I ++DK +L ++ P PN+ +I+R++
Sbjct: 250 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 410 SKQYYGSETDVWSMGVMLYALL--CG--------FLPFDSDSIDQLYDK----ILNGKYT 455
S Q YG E D++++G++L LL C F I ++DK +L +
Sbjct: 208 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLS 267
Query: 456 EPPWMSPNSRQIVRSM 471
+ P PN+ +I+R++
Sbjct: 268 KKPEDRPNTSEILRTL 283
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAI+ + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A L +VAIK + R EI L H++I + +I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 333 FKFDMEL 339
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 268
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 269 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 329 FKFDMEL 335
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 99 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 156
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 157 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 216
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 217 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 276
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 277 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 336
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 337 FKFDMEL 343
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 268
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 269 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 329 FKFDMEL 335
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
R + L R +G G F V ++ VAIK K T + E ++
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-QILSAVAYL 122
H HI KL VI T + +++++E C GEL + R+ + S + Q+ +A+AYL
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK 182
+ HRD+ NVL+ +KL DFGL E + + APE I +
Sbjct: 508 ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 183 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 240
+ + S +DVW GV ++ +L G PF + + +I NG + PP P ++
Sbjct: 568 R-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 626
Query: 241 SMLQVEPGKRIKIQDL 256
+P +R + +L
Sbjct: 627 KCWAYDPSRRPRFTEL 642
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++IE+ G LLD++ E RQ + QI SA+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 253
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 254 WQWNPSDRPSFAEI 267
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 70
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++IE+ G LLD++ E RQ + QI SA+ YL
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK- 189
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 249
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 250 WQWNPSDRPSFAEI 263
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 239
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V EY G LLD + RL + A QI S +AY
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 129
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 190 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 243
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 244 -------------LHDLMCQCWRK-DPEERPT 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 14/256 (5%)
Query: 13 ERTVGSGGFAKV-KLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
++ +G+G F +V K +G+K VAIK +K + E + SH +I
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAVAYLHHL 125
+L VI + ++ EY G L + R++ GE + R I + + YL ++
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQ 183
Y HRDL N+L++ N K+ DFGL E E+ TS G + APE I ++
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 184 YYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRS 241
+ S +DVWS G++++ ++ G P+ S ++ I +G P P++ Q++
Sbjct: 227 FT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQ 285
Query: 242 MLQVEPGKRIKIQDLL 257
Q E +R K D++
Sbjct: 286 CWQQERARRPKFADIV 301
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP + Y + S +DVWS G++++ ++ G P+ S ++ I +G P P
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 276
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDLL 486
++ Q++ Q E +R K D++
Sbjct: 277 SAIYQLMMQCWQQERARRPKFADIV 301
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G + V A + +VAIK + R EI L H++I + +I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 76 -----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHR 130
E +++V + L +++ Q L F QIL + Y+H HR
Sbjct: 93 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 131 DLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSE 188
DLKP N+LL+ +LK+ DFGL A P+ L + Y APE++ + Y
Sbjct: 151 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 189 TDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKILNGKY-------- 225
D+WS+G +L +L F +DQL + I+N K
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 270
Query: 226 --TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM--GPEDNPVS--- 272
+ PW + PN+ ++ ML P KRI+++ L H +++ P D P++
Sbjct: 271 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 330
Query: 273 FRPDHEL 279
F+ D EL
Sbjct: 331 FKFDMEL 337
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K T+ P L E +K + H
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH 72
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAY 121
+ + +L+ V+ + I++V EY G LLD + RL + A QI S +AY
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA--AQIASGMAY 129
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE-VIK 180
+ + Y HRDL N+L+ N K+ DFGL E + Q + + APE +
Sbjct: 130 VERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 181 GKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV 239
G+ + ++DVWS G++L L G +P+ ++ D++ G P P S
Sbjct: 190 GR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---- 243
Query: 240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
+ DL+ W K PE+ P
Sbjct: 244 -------------LHDLMCQCWRK-DPEERPT 261
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 57/301 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + G VA+K + + + R E+ LK ++H++I L
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L ++ + E+ S + Q+L + +LH G
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLY-QMLCGIKHLHSAG 144
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL + + Y APEVI G Y
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRAPEVILGMG-YK 201
Query: 187 SETDVWSMGVMLYALLCGFLPFD-SDSIDQLYDKILNG-----------------KYTE- 227
D+WS+G ++ L+ G + F +D IDQ ++K++ Y E
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVIEQLGTPSAEFMAALQPTVRNYVEN 260
Query: 228 -------------PPWMSPN-----------SRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P W+ P+ +R ++ ML ++P KRI + + L H ++
Sbjct: 261 RPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
Query: 264 M 264
+
Sbjct: 321 V 321
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+ER +G+G F +V L G++ VAIK +K + E + + H ++
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG 126
L V+ + +VIE+ G L D + + + + R I + + YL +G
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQY 184
Y HRDL N+L++ N K+ DFGL E E+ T+ G + APE I+ +++
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
S +DVWS G++++ ++ G P+ S + I G P P Q++
Sbjct: 226 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDC 284
Query: 243 LQVEPGKRIKIQDLLG 258
Q E +R K + ++G
Sbjct: 285 WQKERAERPKFEQIVG 300
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP + QY + S +DVWS G++++ ++ G P+ S + I G P P
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCP 274
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDLLG 487
Q++ Q E +R K + ++G
Sbjct: 275 AGLHQLMLDCWQKERAERPKFEQIVG 300
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 85 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 201
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 262 IDADSRPKFRELI 274
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 260 WMIDADSRPKFRELI 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++IE+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T+ + +V ++C G L H+ + + + RQ + YLH
Sbjct: 64 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 229
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS 356
+ Q K Y ++DV++ G++LY L+ G LP+ +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 225
Query: 454 YTEP 457
Y P
Sbjct: 226 YLSP 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
D+ +Y +G G + V A + +VAIK + R EI L
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 64 SHQHICKLFQVI-----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
H++I + +I E +++V + L +++ Q L F QIL
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRG 156
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAP 176
+ Y+H HRDLKP N+LL+ +LK+ DFGL A P+ L + Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKIL 221
E++ + Y D+WS+G +L +L F +DQL + I+
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 222 NGKY----------TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM- 264
N K + PW + PN+ ++ ML P KRI+++ L H +++
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
Query: 265 -GPEDNPVS---FRPDHEL 279
P D P++ F+ D EL
Sbjct: 337 YDPSDEPIAEAPFKFDMEL 355
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 17/245 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
L +T+G G F V L + G KVA+K +K + E + + + H ++ +L
Sbjct: 16 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQL 70
Query: 72 FQVI-ETSSHIFMVIEYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYA 128
VI E +++V EY G L+D++ R R LG F + A+ YL +
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIKGKQYYGS 187
HRDL NVL+ + K+ DFGL + S Q + P + APE ++ + + +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALR-EAAFST 184
Query: 188 ETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQV 245
++DVWS G++L+ + G +P+ + + ++ G K P P +++++ +
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL 244
Query: 246 EPGKR 250
+ R
Sbjct: 245 DAAMR 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLA-THVLTGEK----VAIKIMKKAT--LGEDLPRVKLEINA 59
R +L+ +G G F KV LA H L E+ VA+K +K+A+ +D R E
Sbjct: 17 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAEL 73
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHI---------------VERQRLG 104
L + HQHI + F V + MV EY G+L + V LG
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 105 EKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
+ A Q+ + + YL L + HRDL N L+ + +K+ DFG+ ++
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN 222
P + PE I +++ +E+DVWS GV+L+ + G P+ S + D I
Sbjct: 194 GGRTMLPIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 252
Query: 223 GKYTEPPWMS-PNSRQIVRSMLQVEPGKRIKIQDL 256
G+ E P P I+R Q EP +R I+D+
Sbjct: 253 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMS-PNSRQIVRSM 471
+ +E+DVWS GV+L+ + G P+ S + D I G+ E P P I+R
Sbjct: 214 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGC 273
Query: 472 LQVEPGKRIKIQDL 485
Q EP +R I+D+
Sbjct: 274 WQREPQQRHSIKDV 287
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLA-THVLTGEK----VAIKIMKKATLG--EDLPRVKLEINA 59
R +L+ +G G F KV LA H L E+ VA+K +K+A+ +D R E
Sbjct: 11 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAEL 67
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHI---------------VERQRLG 104
L + HQHI + F V + MV EY G+L + V LG
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 105 EKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
+ A Q+ + + YL L + HRDL N L+ + +K+ DFG+ ++
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN 222
P + PE I +++ +E+DVWS GV+L+ + G P+ S + D I
Sbjct: 188 GGRTMLPIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 246
Query: 223 GKYTEPPWMS-PNSRQIVRSMLQVEPGKRIKIQDL 256
G+ E P P I+R Q EP +R I+D+
Sbjct: 247 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMS-PNSRQIVRSM 471
+ +E+DVWS GV+L+ + G P+ S + D I G+ E P P I+R
Sbjct: 208 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGC 267
Query: 472 LQVEPGKRIKIQDL 485
Q EP +R I+D+
Sbjct: 268 WQREPQQRHSIKDV 281
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++IE+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLVGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 58/305 (19%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G F +V A H TG+KVA+K + E P L EI L+ + H+++ L ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 75 IETSSH--------IFMVIEYCPG--GELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
T + I++V ++C LL +++ + L E + + +L+ + Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIHR 142
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ---LQTSCGSPNYAAPEVIKG 181
HRD+K NVL+ R+ LKL DFGL SQ + Y PE++ G
Sbjct: 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 202
Query: 182 KQYYGSETDVWSMGVMLYAL---------------------LCGFL-PFDSDSID--QLY 217
++ YG D+W G ++ + LCG + P ++D +LY
Sbjct: 203 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 262
Query: 218 DK--ILNGK----------YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN--WVK 263
+K ++ G+ Y P+ + ++ +L ++P +RI D L H+ W
Sbjct: 263 EKLELVKGQKRKVKDRLKAYVRDPY----ALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318
Query: 264 MGPED 268
P D
Sbjct: 319 PMPSD 323
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 58/318 (18%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALK 61
+ D ++Y +G G F +V A H TG+KVA+K + E P L EI L+
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 62 HISHQHICKLFQVIETSSH--------IFMVIEYCPG--GELLDHIVERQRLGEKESRAF 111
+ H+++ L ++ T + I++V ++C LL +++ + L E +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRV 130
Query: 112 FRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ---LQTSC 168
+ +L+ + Y+H HRD+K NVL+ R+ LKL DFGL SQ
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYAL---------------------LCGFL- 206
+ Y PE++ G++ YG D+W G ++ + LCG +
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 207 PFDSDSID--QLYDK--ILNGK----------YTEPPWMSPNSRQIVRSMLQVEPGKRIK 252
P ++D +LY+K ++ G+ Y P+ + ++ +L ++P +RI
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY----ALDLIDKLLVLDPAQRID 306
Query: 253 IQDLLGHN--WVKMGPED 268
D L H+ W P D
Sbjct: 307 SDDALNHDFFWSDPMPSD 324
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMKKAT-LGEDLPRVKLEINALKHISH 65
++ +L +GSG F V K H VA+KI+K E + E+ L+ H
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T ++ +V ++C G L H+ V+ + + RQ + YLH
Sbjct: 92 VNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
HRD+K N+ L +K+ DFGL K Q++ GS + APEVI+ +
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 184 Y--YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
+ ++DV+S G++LY L+ G LP+ ++ DQ+ + G Y P
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-YASP 257
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
+ ++DV+S G++LY L+ G LP+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPY 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 199
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 260 IDADSRPKFRELI 272
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 58/318 (18%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALK 61
+ D ++Y +G G F +V A H TG+KVA+K + E P L EI L+
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 62 HISHQHICKLFQVIETSSH--------IFMVIEYCPG--GELLDHIVERQRLGEKESRAF 111
+ H+++ L ++ T + I++V ++C LL +++ + L E +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRV 130
Query: 112 FRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ---LQTSC 168
+ +L+ + Y+H HRD+K NVL+ R+ LKL DFGL SQ
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYAL---------------------LCGFL- 206
+ Y PE++ G++ YG D+W G ++ + LCG +
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 207 PFDSDSID--QLYDK--ILNGK----------YTEPPWMSPNSRQIVRSMLQVEPGKRIK 252
P ++D +LY+K ++ G+ Y P+ + ++ +L ++P +RI
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY----ALDLIDKLLVLDPAQRID 306
Query: 253 IQDLLGHN--WVKMGPED 268
D L H+ W P D
Sbjct: 307 SDDALNHDFFWSDPMPSD 324
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 91 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 256
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL 362
+ Q K Y ++DV++ G++LY L+ G LP+ + ++ DQ+
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 194 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 252
Query: 454 YTEP 457
Y P
Sbjct: 253 YLSP 256
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 72/312 (23%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISHQHICKLFQV 74
+G G F +V A H TG+KVA+K + E P L EI L+ + H+++ L ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 75 IETSSH--------IFMVIEYCPG--GELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
T + I++V ++C LL +++ + L E + + +L+ + Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIHR 143
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN----------YA 174
HRD+K NVL+ R+ LKL DFGL SQ PN Y
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-------PNRYXNRVVTLWYR 196
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYAL---------------------LCGFL-PFDSDS 212
PE++ G++ YG D+W G ++ + LCG + P +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 213 ID--QLYDK--ILNGK----------YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG 258
+D +LY+K ++ G+ Y P+ + ++ +L ++P +RI D L
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPY----ALDLIDKLLVLDPAQRIDSDDALN 312
Query: 259 HN--WVKMGPED 268
H+ W P D
Sbjct: 313 HDFFWSDPMPSD 324
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 234
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS 356
+ Q K Y ++DV++ G++LY L+ G LP+ +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 216
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 230
Query: 454 YTEP 457
Y P
Sbjct: 231 YLSP 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ + SG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++++ P G LLD++ E + +G + + QI + YL
Sbjct: 88 RLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 204
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 265 IDADSRPKFRELI 277
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 15 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 70
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSK 186
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 257
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL 362
+ Q K Y ++DV++ G++LY L+ G LP+ + ++ DQ+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 253
Query: 454 YTEP 457
Y P
Sbjct: 254 YLSP 257
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 45/319 (14%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
D+ +Y +G G + V A + +VAIK + R EI L
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 64 SHQHICKLFQVI-----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
H++I + +I E +++V + L +++ Q L F QIL
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRG 138
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAP 176
+ Y+H HRDLKP N+LL+ +LK+ DFGL A P+ L + Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQL--------------YDKIL 221
E++ + Y D+WS+G +L +L F +DQL + I+
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 258
Query: 222 NGKY----------TEPPW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM- 264
N K + PW + PN+ ++ ML P KRI+++ L H ++
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
Query: 265 -GPEDNPVS---FRPDHEL 279
P D P++ F+ D EL
Sbjct: 319 YDPSDEPIAEAPFKFDMEL 337
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 14 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 69
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 129
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSK 185
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 229
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS 356
+ Q K Y ++DV++ G++LY L+ G LP+ +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 225
Query: 454 YTEP 457
Y P
Sbjct: 226 YLSP 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 36/301 (11%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICK 70
+ R + GGFA V A V +G + A+K + ++ ++ E+ +K +S H +I +
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ-EVCFMKKLSGHPNIVQ 90
Query: 71 LFQVIETS--------SHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVA 120
+ ++ E C G E L + R L F Q AV
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 121 YLHHLG--YAHRDLKPENVLLDRNQNLKLIDFGLC------------AKPEGGLESQLQT 166
++H HRDLK EN+LL +KL DFG A+ +E ++ T
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI-T 209
Query: 167 SCGSPNYAAPEVIKGKQYY--GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK 224
+P Y PE+I + G + D+W++G +LY L PF+ D +I+NGK
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE----DGAKLRIVNGK 265
Query: 225 YTEPPWMSPNS--RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREK 282
Y+ PP + + ++R+MLQV P +R+ I +++ H ++ N P EL E+
Sbjct: 266 YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV-HQLQEIAAARNVNPKSPITELLEQ 324
Query: 283 D 283
+
Sbjct: 325 N 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 415 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS--RQIVRSML 472
G + D+W++G +LY L PF+ D +I+NGKY+ PP + + ++R+ML
Sbjct: 231 GEKQDIWALGCILYLLCFRQHPFE----DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAML 286
Query: 473 QVEPGKRIKIQDLL 486
QV P +R+ I +++
Sbjct: 287 QVNPEERLSIAEVV 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 257
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL 362
+ Q K Y ++DV++ G++LY L+ G LP+ + ++ DQ+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 253
Query: 454 YTEP 457
Y P
Sbjct: 254 YLSP 257
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G ++ + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++C + F D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILSHFMPICTILISQYFPTI 385
Y D+WS+G ++ ++C + F D IDQ ++K++ C + + PT+
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPAFMKKLQPTV 256
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 66 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 231
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL 362
+ Q K Y ++DV++ G++LY L+ G LP+ + ++ DQ+
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 169 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 227
Query: 454 YTEP 457
Y P
Sbjct: 228 YLSP 231
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK- 193
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 253
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 254 WQWNPSDRPSFAEI 267
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 234
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS 356
+ Q K Y ++DV++ G++LY L+ G LP+ +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 216
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 230
Query: 454 YTEP 457
Y P
Sbjct: 231 YLSP 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 9 QYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISHQ 66
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHHL 125
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 85 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--GK 182
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+ K
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 183 QYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 249
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 324 KKQGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQL 362
+ Q K Y ++DV++ G++LY L+ G LP+ + ++ DQ+
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 245
Query: 454 YTEP 457
Y P
Sbjct: 246 YLSP 249
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 8 NQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMK-KATLGEDLPRVKLEINALKHISH 65
Q + + +GSG F V K H VA+K++ A + L K E+ L+ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHH 124
+I LF T + +V ++C G L H+ + + + RQ + YLH
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIK--G 181
HRDLK N+ L + +K+ DFGL K Q + GS + APEVI+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEP 228
K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G Y P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-YLSP 229
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 284 DDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVM 343
+D+ + D + WS +++ + ++ + Q K Y ++DV++ G++
Sbjct: 139 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 344 LYALLCGFLPFDS-DSIDQL 362
LY L+ G LP+ + ++ DQ+
Sbjct: 199 LYELMTGQLPYSNINNRDQI 218
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 400 SAIVLCSAPS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK 453
S +L AP K Y ++DV++ G++LY L+ G LP+ + ++ DQ+ + G
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG- 225
Query: 454 YTEP 457
Y P
Sbjct: 226 YLSP 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKI----MKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV I + +++AT + + E + + + H+C
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 115 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 173
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 174 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 231
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 232 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 291
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 292 IDADSRPKFRELI 304
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVR 469
+ Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMV 287
Query: 470 SMLQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 288 KCWMIDADSRPKFRELI 304
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ + SG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESILHR-IYT 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 258 IDADSRPKFRELI 270
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 30 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 85
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSK 201
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 10 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 65
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSK 181
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLA-THVLTGEK----VAIKIMKKATLG--EDLPRVKLEINA 59
R +L+ +G G F KV LA H L E+ VA+K +K+A+ +D R E
Sbjct: 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAEL 96
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHI---------------VERQRLG 104
L + HQHI + F V + MV EY G+L + V LG
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 105 EKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
+ A Q+ + + YL L + HRDL N L+ + +K+ DFG+ ++
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN 222
P + PE I +++ +E+DVWS GV+L+ + G P+ S + D I
Sbjct: 217 GGRTMLPIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275
Query: 223 GKYTEPPWMS-PNSRQIVRSMLQVEPGKRIKIQDL 256
G+ E P P I+R Q EP +R I+D+
Sbjct: 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMS-PNSRQIVRSM 471
+ +E+DVWS GV+L+ + G P+ S + D I G+ E P P I+R
Sbjct: 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGC 296
Query: 472 LQVEPGKRIKIQDL 485
Q EP +R I+D+
Sbjct: 297 WQREPQQRHSIKDV 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKK---ATLGEDLPRVKLEINALKHISH 65
+ LE +G GGF KV A + G++VA+K + + + + V+ E + H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL 125
+I L V ++ +V+E+ GG L + ++ +R+ + QI + YLH
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 126 GYA---HRDLKPENVLLDR--------NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYA 174
HRDLK N+L+ + N+ LK+ DFGL + + ++ G+ +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH---RTTKMSAAGAYAWM 181
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILN 222
APEVI+ + +DVWS GV+L+ LL G +PF D + Y +N
Sbjct: 182 APEVIRASMF-SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 414 YGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILN 451
+ +DVWS GV+L+ LL G +PF D + Y +N
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 331 YGSETDVWSMGVMLYALLCGFLPF 354
+ +DVWS GV+L+ LL G +PF
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 21 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 76
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 136
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSK 192
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 253
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 254 WQWNPSDRPSFAEI 267
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 13/247 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHIC--KLF 72
+G G + +V G A+K G +D R E+ + + + QH C +L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG-QHPCCVRLE 123
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
Q E +++ E C G L H L E + + R L A+A+LH G H D
Sbjct: 124 QAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDV 191
+KP N+ L KL DFGL E G + G P Y APE+++G YG+ DV
Sbjct: 183 VKPANIFLGPRGRCKLGDFGLLV--ELGTAGAGEVQEGDPRYMAPELLQGS--YGTAADV 238
Query: 192 WSMGVMLYALLCGF-LPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR 250
+S+G+ + + C LP + QL L ++T +S R ++ ML+ +P R
Sbjct: 239 FSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMMLEPDPKLR 296
Query: 251 IKIQDLL 257
+ LL
Sbjct: 297 ATAEALL 303
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 414 YGSETDVWSMGVMLYALLCGF-LPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
YG+ DV+S+G+ + + C LP + QL L ++T +S R ++ ML
Sbjct: 232 YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMML 289
Query: 473 QVEPGKRIKIQDLL 486
+ +P R + LL
Sbjct: 290 EPDPKLRATAEALL 303
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ + SG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFGL AK G E + G + A E I + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 204
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 265 IDADSRPKFRELI 277
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GEKV AIK +++AT + + E + + + H+C
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + TS+ + ++ + P G LLD++ E + +G + + QI + YL
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ Q++K+ DFG AK G E + G + A E I + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGR-AKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYT 204
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 245 VEPGKRIKIQDLL 257
++ R K ++L+
Sbjct: 265 IDADSRPKFRELI 277
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y ++DVWS GV ++ L+ G P+D ++ + G + +PP + + I+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 472 LQVEPGKRIKIQDLL 486
++ R K ++L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 23/261 (8%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKA--TLGEDLPRVKLEINALKHISHQHICKL 71
R +G G F V A V E VAIK M + E + E+ L+ + H + +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 72 FQVIETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
++V+EYC G +LL+ V ++ L E E A L +AYLH H
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG--KQYYGS 187
RD+K N+LL +KL DFG + + G+P + APEVI + Y
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFG-----SASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 188 ETDVWSMGVMLYALLCGFLP-FDSDSIDQLYDKILNGKYTEPPWM-----SPNSRQIVRS 241
+ DVWS+G+ L P F+ +++ LY N E P + S R V S
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249
Query: 242 MLQVEPGKRIKIQDLLGHNWV 262
LQ P R + LL H +V
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFV 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R LE+ +G+G F +V +AT+ KVA+K MK ++ + E N +K + H
Sbjct: 181 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHD 237
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA----FFRQILSAVAYL 122
+ KL V+ T I+++ E+ G LLD + + G K+ F QI +A++
Sbjct: 238 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 123 HHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIKG 181
Y HRDL+ N+L+ + K+ DFGL + P + APE I
Sbjct: 295 EQRNYIHRDLRAANILVSASLVCKIADFGLA-----------RVGAKFPIKWTAPEAIN- 342
Query: 182 KQYYGS---ETDVWSMGVMLYALLC-GFLPF 208
+GS ++DVWS G++L ++ G +P+
Sbjct: 343 ---FGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 130/319 (40%), Gaps = 45/319 (14%)
Query: 4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI 63
D+ +Y +G G + V A + +VAIK + R EI L
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 64 SHQHICKLFQVI-----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
H++I + +I E +++V + L +++ Q L F QIL
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRG 138
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC--AKPEGGLESQLQTSCGSPNYAAP 176
+ Y+H HRDLKP N+LL+ +LK+ DFGL A P+ L + Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 177 EVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYD----------------- 218
E++ + Y D+WS+G +L +L F +DQL
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGI 258
Query: 219 --KILNGKYTEP-----PW--MSPNSRQ----IVRSMLQVEPGKRIKIQDLLGHNWVKM- 264
K N + P PW + PN+ ++ ML P KRI+++ L H ++
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
Query: 265 -GPEDNPVS---FRPDHEL 279
P D P++ F+ D EL
Sbjct: 319 YDPSDEPIAEAPFKFDMEL 337
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 23/261 (8%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKA--TLGEDLPRVKLEINALKHISHQHICKL 71
R +G G F V A V E VAIK M + E + E+ L+ + H + +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 72 FQVIETSSHIFMVIEYCPGG--ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAH 129
++V+EYC G +LL+ V ++ L E E A L +AYLH H
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 130 RDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG--KQYYGS 187
RD+K N+LL +KL DFG + + G+P + APEVI + Y
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFG-----SASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 188 ETDVWSMGVMLYALLCGFLP-FDSDSIDQLYDKILNGKYTEPPWM-----SPNSRQIVRS 241
+ DVWS+G+ L P F+ +++ LY N E P + S R V S
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 288
Query: 242 MLQVEPGKRIKIQDLLGHNWV 262
LQ P R + LL H +V
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFV 309
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 73
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 192
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 252
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 253 WQWNPSDRPSFAEI 266
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 242
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 67
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++IE+ G LLD++ E RQ + QI SA+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK- 186
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ Q+Y+ + E P P +++R+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRAC 246
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 247 WQWNPSDRPSFAEI 260
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ Q+Y+ + E P P
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCP 236
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G ++ + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++C + F D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
P G+++ K+ P+ V F D E
Sbjct: 263 RP-------KYAGYSFEKLFPD---VLFPADSE 285
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 44/277 (15%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINALKHISH 65
R LE +G G F +V + T T +VAIK +K + P L E +K + H
Sbjct: 184 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMS---PEAFLQEAQVMKKLRH 239
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR---------QIL 116
+ + +L+ V+ + I++V EY G LLD + + E + R QI
Sbjct: 240 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIA 291
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAP 176
S +AY+ + Y HRDL+ N+L+ N K+ DFGL E + Q + + AP
Sbjct: 292 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAP 351
Query: 177 E-VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
E + G+ + ++DVWS G++L L G +P+ ++ D++ G P P
Sbjct: 352 EAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 409
Query: 235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV 271
S + DL+ W K PE+ P
Sbjct: 410 S-----------------LHDLMCQCWRK-DPEERPT 428
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 30 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 85
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEETSSVGSKFPVRWSPPEVLMYSK-FSSK 201
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 56/308 (18%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPR------- 52
KYI N Y + RT+ G F K+ L + A+K +K+ L + D +
Sbjct: 28 KYI---NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 53 -------VKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE 105
K E+ + I +++ +I ++++ EY +L E + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL-KFDEYFFVLD 141
Query: 106 KESRAFF---------RQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAK 155
K F + +L++ +Y+H+ HRD+KP N+L+D+N +KL DFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG---E 198
Query: 156 PEGGLESQLQTSCGSPNYAAPEVIKGKQYY-GSETDVWSMGVMLYALLCGFLPFD-SDSI 213
E ++ +++ S G+ + PE + Y G++ D+WS+G+ LY + +PF S+
Sbjct: 199 SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 214 DQLYDKILNGKYTEP-------------------PWMSPNSRQIVRSMLQVEPGKRIKIQ 254
+L++ I P ++S ++ L+ P +RI +
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 255 DLLGHNWV 262
D L H W+
Sbjct: 319 DALKHEWL 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 412 QYYGSETDVWSMGVMLYALLCGFLPFD-SDSIDQLYDKILNGKYTEP------------- 457
Y G++ D+WS+G+ LY + +PF S+ +L++ I P
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNK 286
Query: 458 ------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV 491
++S ++ L+ P +RI +D L H W+
Sbjct: 287 KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 329 QYYGSETDVWSMGVMLYALLCGFLPF 354
Y G++ D+WS+G+ LY + +PF
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLA-THVLTGEK----VAIKIMKKATLG--EDLPRVKLEINA 59
R +L+R +G G F KV LA + L+ K VA+K +K TL +D R E
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAEL 70
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL--------LDHIV--------ERQRL 103
L ++ H+HI K + V + MV EY G+L D ++ + L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
G + QI S + YL + HRDL N L+ N +K+ DFG+ +
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + PE I +++ +E+DVWS GV+L+ + G P+ S ++ + I
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 249
Query: 222 NGKYTEPPWMSPNSRQIVRSML---QVEPGKRIKIQDL 256
G+ E P + P +++ ML Q EP +R+ I+++
Sbjct: 250 QGRVLERPRVCP--KEVYDVMLGCWQREPQQRLNIKEI 285
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 408 PSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 464
P S Y + +E+DVWS GV+L+ + G P+ S ++ + I G+ E P + P
Sbjct: 204 PESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCP-- 261
Query: 465 RQIVRSML---QVEPGKRIKIQDL 485
+++ ML Q EP +R+ I+++
Sbjct: 262 KEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+ +G+G F VK G+ VAIK++K+ ++ ED E + ++SH+ + +L+
Sbjct: 15 KELGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSED--EFIEEAKVMMNLSHEKLVQLY 70
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD 131
V IF++ EY G LL+++ E R R ++ + + A+ YL + HRD
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAPEVIKGKQYYGSE 188
L N L++ +K+ DFGL L+ + +S GS ++ PEV+ + + S+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSRGSKFPVRWSPPEVLMYSK-FSSK 186
Query: 189 TDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG 223
+D+W+ GV+++ + G +P++ + + + I G
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 253
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 254 WQWNPSDRPSFAEI 267
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 74
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 253
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 254 WQWNPSDRPSFAEI 267
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 70
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK- 189
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 249
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 250 WQWNPSDRPSFAEI 263
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 239
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K EDL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G F +V VA+K +K+ T+ ++ E +K I H
Sbjct: 10 RTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 67
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK- 186
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ Q+Y+ + E P P +++R+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRAC 246
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDD 284
Q P R ++ H + +++ +S + EL ++ +
Sbjct: 247 WQWNPSDRPSFAEI--HQAFETMFQESSISDEVEKELGKRGE 286
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ Q+Y+ + E P P
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCP 236
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 71
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 190
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 250
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 251 WQWNPSDRPSFAEI 264
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 240
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 25 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 82
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 201
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 261
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 262 WQWNPSDRPSFAEI 275
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 251
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALK 61
RN +T+G+G F KV AT G+ KVA+K++K ++ + E+ +
Sbjct: 30 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 62 HIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER---------------QRLGE 105
H+ H++I L + ++ EYC G+LL+ + + + L +
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 106 KESRA--------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE 157
++ R F Q+ +A+L HRD+ NVLL K+ DFGL
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 158 GGLESQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQ 215
++ + P + APE I Y ++DVWS G++L+ + G P+ ++
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 268
Query: 216 LYDKILNGKY--TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
+ K++ Y +P + N I+++ +EP R Q +
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY--TEPPWMSPNSRQIVRS 470
Y ++DVWS G++L+ + G P+ ++ + K++ Y +P + N I+++
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 296
Query: 471 MLQVEPGKRIKIQDL 485
+EP R Q +
Sbjct: 297 CWALEPTHRPTFQQI 311
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 71
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK- 190
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 250
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 251 WQWNPSDRPSFAEI 264
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 240
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 71
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 190
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 250
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 251 WQWNPSDRPSFAEI 264
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 240
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R L + +G+G F +V + + KVA+K +K T+ + E N +K + H
Sbjct: 11 RESIKLVKKLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHD 67
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIV--ERQRLGEKESRAFFRQILSAVAYLHH 124
+ +L+ V+ I+++ E+ G LLD + E ++ + F QI +AY+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
Y HRDL+ NVL+ + K+ DFGL E + + + + APE I
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG-C 186
Query: 185 YGSETDVWSMGVMLYALLC-GFLPF 208
+ +++VWS G++LY ++ G +P+
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 69
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 249 WQWNPSDRPSFAEI 262
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 23 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 79 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 137
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 193
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 246 EP 247
P
Sbjct: 263 RP 264
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 57/301 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLY-QMLXGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 M 264
+
Sbjct: 323 V 323
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR----- 113
+K I H++I L +++++EY G L +++ R+ G + S R
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 114 -----------QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
Q+ + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDX 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 17 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 72
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 73 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 187
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 86
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDX 205
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 286
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 287 DCWHAVPSQRPTFKQLV 303
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 25 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 80
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 81 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 195
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDX 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 26 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 81
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 82 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 140
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 196
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 19 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 74
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 75 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 133
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 189
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++ER +G+G F +V + + G KVA+K +K+ ++ D E N +K + HQ +
Sbjct: 17 LVER-LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLV 71
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGY 127
+L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGT 186
Query: 188 ---ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
P G+++ K+ P+ V F D E
Sbjct: 263 RP-------KYAGYSFEKLFPD---VLFPADSE 285
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 57/301 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 M 264
+
Sbjct: 323 V 323
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 18 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 73
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 74 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 132
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN----YGTF 188
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 58/284 (20%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLE-INALKHISH 65
R L + +G+G F +V + T KVAIK +K T+ P LE +K + H
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWN-GNTKVAIKTLKPGTMS---PESFLEEAQIMKKLKH 63
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAF--------FRQILS 117
+ +L+ V+ + I++V EY G LLD L + E RA Q+ +
Sbjct: 64 DKLVQLYAVV-SEEPIYIVTEYMNKGSLLDF------LKDGEGRALKLPNLVDMAAQVAA 116
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPE 177
+AY+ + Y HRDL+ N+L+ K+ DFGL E + Q + + APE
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 178 -VIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 235
+ G+ + ++DVWS G++L L+ G +P+ P M N+
Sbjct: 177 AALYGR--FTIKSDVWSFGILLTELVTKGRVPY--------------------PGM--NN 212
Query: 236 RQIVRSMLQVEPGKR--------IKIQDLLGHNWVKMGPEDNPV 271
R+++ QVE G R I + +L+ H W K PE+ P
Sbjct: 213 REVLE---QVERGYRMPCPQDCPISLHELMIHCW-KKDPEERPT 252
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 86
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 205
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 289 WHAVPSQRPTFKQLV 303
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 147
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 204
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 205 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 263
Query: 246 EP 247
P
Sbjct: 264 RP 265
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 25/273 (9%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 140
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 197
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++C + F D IDQ ++K++ T P + VR+ ++
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 256
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
P G+++ K+ P+ V F D E
Sbjct: 257 RP-------KYAGYSFEKLFPD---VLFPADSE 279
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 23 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 78
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 79 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 137
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGTF 193
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLY-QMLXGIKHLHSAG 139
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 196
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 316 VWYDPAEVEAPPPQIYDKQLDEREHTI 342
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 22 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 77
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 78 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGTF 192
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 71
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 190
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 250 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 273
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 274 WHAVPSQRPTFKQLV 288
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 10 YILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDLPRVKLEINALKHISHQHI 68
YI +G G +A V LT VA+K I + G ++ E++ LK + H +I
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANI 62
Query: 69 CKLFQVIETSSHIFMVIEYCPGG--ELLD---HIVERQRLGEKESRAFFRQILSAVAYLH 123
L +I T + +V EY + LD +I+ + + F Q+L +AY H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNV-----KLFLFQLLRGLAYCH 117
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
HRDLKP+N+L++ LKL DFGL A+ + + Y P+++ G
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGL-ARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYTEPPW 230
Y ++ D+W +G + Y + G F ++++ I G TE W
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK 70
++ER +G+G F +V + + KVA+K +K+ ++ D E N +K + HQ + +
Sbjct: 27 LVER-LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVR 82
Query: 71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYA 128
L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 83 LYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS- 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGTF 197
Query: 188 --ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLY-QMLXGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 323 VWYDPAEVEAPPPQIYDKQLDEREHTI 349
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 25/273 (9%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 35 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 151
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 208
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++C + F D IDQ ++K++ T P + VR+ ++
Sbjct: 209 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 267
Query: 246 EPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHE 278
P G+++ K+ P+ V F D E
Sbjct: 268 RP-------KYAGYSFEKLFPD---VLFPADSE 290
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 28 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 206 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 264
Query: 234 NS 235
+
Sbjct: 265 AA 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 38 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 156 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 216 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 274
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 275 AALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 11 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 189 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 247
Query: 234 NS 235
+
Sbjct: 248 AA 249
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++ER +G+G F +V + + G KVA+K +K+ ++ D E N +K + HQ +
Sbjct: 17 LVER-LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLV 71
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGY 127
+L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGT 186
Query: 188 ---ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 20 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 79
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 80 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 198
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 258 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 281
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 282 WHAVPSQRPTFKQLV 296
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 16 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 75
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 76 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 194
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 254 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 277
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 278 WHAVPSQRPTFKQLV 292
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 86
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 205
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 289 WHAVPSQRPTFKQLV 303
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 86
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ----------------R 102
+K I H++I L +++++EY G L +++ R+ +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 205
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 289 WHAVPSQRPTFKQLV 303
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 16/238 (6%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLE 56
+K +LR +L GSG F V + GE V AIK++++ T + + E
Sbjct: 14 LKETELRKVKVL----GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDE 69
Query: 57 INALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQI 115
+ + ++ +L + TS+ + +V + P G LLDH+ E R RLG ++ + QI
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI 128
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NY 173
++YL + HRDL NVL+ ++K+ DFGL A+ E++ G +
Sbjct: 129 AKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLDIDETEYHADGGKVPIKW 187
Query: 174 AAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPP 229
A E I ++ + ++DVWS GV ++ L+ G P+D ++ D + G + +PP
Sbjct: 188 MALESIL-RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 19 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 78
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 79 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 197
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 257 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 280
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 281 WHAVPSQRPTFKQLV 295
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 57/301 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 M 264
+
Sbjct: 323 V 323
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+ER +G+G F +V L G++ VAIK +K + E + + H +I
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG 126
L V+ S + +V EY G L D +++ + + R I + + YL +G
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQY 184
Y HRDL N+L++ N K+ DFGL E E+ T G + APE I +++
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 185 YGSETDVWSMGVMLYALL 202
S +DVWS G++++ ++
Sbjct: 205 T-SASDVWSYGIVMWEVV 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 17/258 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI-MKKATLGEDLPRVKLEINALKHISHQHICK 70
++ +G+G F V A G VA+KI M++ E + E+ +K + H +I
Sbjct: 41 IKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 71 LFQVIETSSHIFMVIEYCPGG---ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG- 126
+ ++ +V EY G LL R++L E+ + + + YLH+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 127 -YAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLK N+L+D+ +K+ DFGL K L S + + G+P + APEV++ +
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVLR-DEP 215
Query: 185 YGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI-LNGKYTEPPW-MSPNSRQIVRSM 242
++DV+S GV+L+ L P+ + + Q+ + K E P ++P I+
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGC 275
Query: 243 LQVEPGKR---IKIQDLL 257
EP KR I DLL
Sbjct: 276 WTNEPWKRPSFATIMDLL 293
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++ER +G+G F +V + + G KVA+K +K+ ++ D E N +K + HQ +
Sbjct: 12 LVER-LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLV 66
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGY 127
+L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 67 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDL+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGT 181
Query: 188 ---ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKNTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ +L + +G G F +V LA + + KVA+K++K +DL + E+
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 127
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER----------------QR 102
+K I H++I L +++++EY G L +++ R ++
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
L K+ + Q+ + YL HRDL NVL+ + +K+ DFGL A+ ++
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIHHIDY 246
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+L+ + G P+ +++L+
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 306 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 471
Y ++DVWS GV+L+ + G P+ +++L+ + G + P N ++R
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 329
Query: 472 LQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 330 WHAVPSQRPTFKQLV 344
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS-RQIVRSMLQVEPGKRIKIQDLL 257
+ Q++ Q + R K + ++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKI-MKKATLGEDLPRVKLEINALKHISHQHICK 70
++ +G+G F V A G VA+KI M++ E + E+ +K + H +I
Sbjct: 41 IKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 71 LFQVIETSSHIFMVIEYCPGG---ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG- 126
+ ++ +V EY G LL R++L E+ + + + YLH+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 127 -YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HR+LK N+L+D+ +K+ DFGL S +++ G+P + APEV++ +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS-KSAAGTPEWMAPEVLR-DEPS 216
Query: 186 GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI-LNGKYTEPPW-MSPNSRQIVRSML 243
++DV+S GV+L+ L P+ + + Q+ + K E P ++P I+
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCW 276
Query: 244 QVEPGKR---IKIQDLL 257
EP KR I DLL
Sbjct: 277 TNEPWKRPSFATIMDLL 293
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 148
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMG-YK 205
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV 245
D+WS+G ++ ++ G + F +D IDQ ++K++ T P + VR+ ++
Sbjct: 206 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVEN 264
Query: 246 EP 247
P
Sbjct: 265 RP 266
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 67
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HRDL N L+ N +K+ DFGL G + + + APE + +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK- 186
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ Q+Y+ + E P P +++R+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRAC 246
Query: 243 LQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDD 284
Q P R ++ H + +++ +S + EL ++ +
Sbjct: 247 WQWNPSDRPSFAEI--HQAFETMFQESSISDEVEKELGKRGE 286
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ Q+Y+ + E P P
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCP 236
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 47/287 (16%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL-- 71
+ +G+G F V A V + E K+++ E+ ++ + H ++ L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR------ELQIMRIVKHPNVVDLKA 99
Query: 72 --FQVIETSSHIFM--VIEYCPGG--ELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHH 124
+ + +F+ V+EY P H + +Q + + + Q+L ++AY+H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 125 LGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
+G HRD+KP+N+LLD LKLIDFG AK E + C S Y APE+I G
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGEPNVSXIC-SRYYRAPELIFGAT 217
Query: 184 YYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYD-------------KILNGKYTE-- 227
Y + D+WS G ++ L+ G F +S IDQL + K +N Y E
Sbjct: 218 NYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277
Query: 228 -------------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNW 261
P P++ ++ +L+ P R+ + L H +
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 11/256 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINAL 60
K++ +L +G G F +V VA+K ++ TL DL L E L
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARIL 166
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAV 119
K SH +I +L V I++V+E GG+ L + E RL K + +
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEV 178
YL HRDL N L+ LK+ DFG+ + G+ + P + APE
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEA 286
Query: 179 IKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQ 237
+ + Y SE+DVWS G++L+ G P+ + S Q + + G P + P++
Sbjct: 287 LNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDA-- 343
Query: 238 IVRSMLQV---EPGKR 250
+ R M Q EPG+R
Sbjct: 344 VFRLMEQCWAYEPGQR 359
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 398 LRSAIVLCSAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 454
LR V +AP + Y Y SE+DVWS G++L+ G P+ + S Q + + G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR 333
Query: 455 TEPPWMSPNSRQIVRSMLQV---EPGKR 479
P + P++ + R M Q EPG+R
Sbjct: 334 LPCPELCPDA--VFRLMEQCWAYEPGQR 359
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 80
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 140
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 199
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 200 VASDVWSFGVVLYELF 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDLPRVKLEINALKHIS-HQ 66
+Y L + +G G + V + TGE VA+K I D R EI L +S H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 67 HICKLFQVIETSSH--IFMVIEYCPGGELLDHIVERQRLGEKESRAFF-RQILSAVAYLH 123
+I L V+ + +++V +Y E H V R + E + + Q++ + YLH
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLC------------------AKPEGGLESQ-- 163
G HRD+KP N+LL+ ++K+ DFGL E + Q
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQL 216
L + Y APE++ G Y D+WS+G +L +LCG F S +++QL
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 19/259 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSM 208
Query: 195 GVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEPPWMSPNS------RQIVRSMLQ 244
G+ L + G P S S I +L D I+N EPP P+ + V L
Sbjct: 209 GLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN----EPPPKLPSGVFSLEFQDFVNKCLI 264
Query: 245 VEPGKRIKIQDLLGHNWVK 263
P +R ++ L+ H ++K
Sbjct: 265 KNPAERADLKQLMVHAFIK 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 392 GQVINLLRSAIVLCSAPSSKQ-----YYGSETDVWSMGVMLYALLCGFLPFDSDS----I 442
GQ+I+ + ++ V + S + +Y ++D+WSMG+ L + G P S S I
Sbjct: 172 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 443 DQLYDKILNGKYTEPPWMSPNS------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 492
+L D I+N EPP P+ + V L P +R ++ L+ H ++K
Sbjct: 232 FELLDYIVN----EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 273 FRPDHELREKDDDVIKVMADHK---QLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQ 329
R H++ +D ++ + + +L + QL + N T + + QG
Sbjct: 139 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT- 197
Query: 330 YYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILS 368
+Y ++D+WSMG+ L + G P S S I +L D I++
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 75
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 194
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 195 VASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 76
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 195
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 21 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 80
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL-ARDINNIDY 199
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 200 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 259 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 221 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 280
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 281 DCWHAVPSQRPTFKQLV 297
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +++ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 107
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 167
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 226
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 227 VASDVWSFGVVLYELF 242
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 74
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 193
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 194 VASDVWSFGVVLYELF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 79
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 198
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 199 VASDVWSFGVVLYELF 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 82
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 201
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 202 VASDVWSFGVVLYELF 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 81
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 141
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 200
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 201 VASDVWSFGVVLYELF 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 76
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 195
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 23 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 82
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 201
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 202 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 261 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 223 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 282
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 283 DCWHAVPSQRPTFKQLV 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 26 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 85
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 204
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 205 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 264 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 226 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 285
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 286 DCWHAVPSQRPTFKQLV 302
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 140
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 197
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 317 VWYDPAEVEAPPPQIYDKQLDEREHTI 343
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 140
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 197
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 317 VWYDPAEVEAPPPQIYDKQLDEREHTI 343
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V EY G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +G+ HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS 235
+
Sbjct: 277 AA 278
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 323 VWYDPAEVEAPPPQIYDKQLDEREHTI 349
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 83
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 143
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 202
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 203 VASDVWSFGVVLYELF 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 94
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 213
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 214 VASDVWSFGVVLYELF 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 139
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 196
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 316 VWYDPAEVEAPPPQIYDKQLDEREHTI 342
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 147
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 204
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 324 VWYDPAEVEAPPPQIYDKQLDEREHTI 350
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 145
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 202
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 322 VWYDPAEVEAPPPQIYDKQLDEREHTI 348
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 290 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 147
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 204
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 324 VWYDPAEVEAPPPQIYDKQLDEREHTI 350
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 276
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HR+L N L+ N +K+ DFGL G + + + APE + +
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 395
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 455
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 456 WQWNPSDRPSFAEI 469
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 445
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 11/256 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKL-EINAL 60
K++ +L +G G F +V VA+K ++ TL DL L E L
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARIL 166
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAV 119
K SH +I +L V I++V+E GG+ L + E RL K + +
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEV 178
YL HRDL N L+ LK+ DFG+ + G+ + P + APE
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 179 IKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQ 237
+ + Y SE+DVWS G++L+ G P+ + S Q + + G P + P++
Sbjct: 287 LNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDA-- 343
Query: 238 IVRSMLQV---EPGKR 250
+ R M Q EPG+R
Sbjct: 344 VFRLMEQCWAYEPGQR 359
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 398 LRSAIVLCSAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 454
LR V +AP + Y Y SE+DVWS G++L+ G P+ + S Q + + G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR 333
Query: 455 TEPPWMSPNSRQIVRSMLQV---EPGKR 479
P + P++ + R M Q EPG+R
Sbjct: 334 LPCPELCPDA--VFRLMEQCWAYEPGQR 359
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 35 KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELL 94
KVA+K +K+ ++ D E N +K + HQ + +L+ V+ T I+++ EY G L+
Sbjct: 39 KVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLV 95
Query: 95 DHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL 152
D + +L + QI +A++ Y HRDL+ N+L+ + K+ DFGL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 153 CAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS---ETDVWSMGVMLYALLC-GFLPF 208
E + + + + APE I YG+ ++DVWS G++L ++ G +P+
Sbjct: 156 ARLIEDAEXTAREGAKFPIKWTAPEAIN----YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 146
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 203
Query: 187 SETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 323 VWYDPAEVEAPPPQIYDKQLDEREHTI 349
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 216 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 273
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HR+L N L+ N +K+ DFGL G + + + APE + +
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 392
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 452
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 453 WQWNPSDRPSFAEI 466
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 442
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 139
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++EY G L +++ R+ G + E +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 258
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 318 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 339
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 340 DCWHAVPSQRPTFKQLV 356
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 10/234 (4%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEK--VAIKIMKKATLGEDLPRVKLEINAL 60
++ N I + +G G F V+ + + ++ VAIK++K+ T D + E +
Sbjct: 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 64
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAV 119
+ + +I +L V + + + +V+E GG L +V +R+ + Q+ +
Sbjct: 65 HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 123
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAP 176
YL + HRDL NVLL K+ DFGL +K G +S + AP
Sbjct: 124 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL-SKALGADDSYYTARSAGKWPLKWYAP 182
Query: 177 EVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPFDSDSIDQLYDKILNGKYTEPP 229
E I ++ + S +DVWS GV ++ AL G P+ ++ I GK E P
Sbjct: 183 ECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 94
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 213
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 214 VASDVWSFGVVLYELF 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 184
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 241
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 361 VWYDPAEVEAPPPQIYDKQLDEREHTI 387
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 79
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHI-VERQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ +R+ + + QI + YL Y
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK-FS 198
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 199 VASDVWSFGVVLYELF 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+ I E G+GG V H +G +A K++ ++ E+ L + +I
Sbjct: 19 ERISELGAGNGGV--VTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL---HHL 125
+ + I + +E+ GG L + E +R+ E+ +L +AYL H +
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI 136
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYY 185
HRD+KP N+L++ +KL DFG+ + ++S + G+ +Y APE ++G +Y
Sbjct: 137 --MHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMAPERLQG-THY 190
Query: 186 GSETDVWSMGVMLYALLCGFLPF---DSDSIDQLYDK-ILNGKYTEPPWMS 232
++D+WSMG+ L L G P D+ ++ ++ + +++G+ EP +S
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS 241
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 392 GQVINLLRSAIVLCS---APSSKQ--YYGSETDVWSMGVMLYALLCGFLPF---DSDSID 443
GQ+I+ + ++ V AP Q +Y ++D+WSMG+ L L G P D+ ++
Sbjct: 163 GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELE 222
Query: 444 QLYDK-ILNGKYTEPPWMS 461
++ + +++G+ EP +S
Sbjct: 223 AIFGRPVVDGEEGEPHSIS 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLF 72
+ +GSG V A + VAIK + + + R E+ +K ++H++I L
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 73 QV------IETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG 126
V +E +++V+E L +++ + E+ S + Q+L + +LH G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLY-QMLCGIKHLHSAG 184
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYG 186
HRDLKP N+++ + LK++DFGL G + + Y APEVI G Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG-YK 241
Query: 187 SETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG---------KYTEP-------- 228
D+WS+G ++ ++ + F D IDQ ++K++ K +P
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 229 ---------PWMSPNS----------------RQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P + P+S R ++ ML ++P KRI + D L H ++
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 264 MGPEDNPVSFRP----DHELREKDDDV 286
+ + V P D +L E++ +
Sbjct: 361 VWYDPAEVEAPPPQIYDKQLDEREHTI 387
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 461 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM 493
+ +R ++ ML ++P KRI + D L H ++ +
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
R ++ +G G + +V VA+K +K+ T+ ++ E +K I H
Sbjct: 258 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHP 315
Query: 67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHH 124
++ +L V +++ E+ G LLD++ E RQ + QI SA+ YL
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
+ HR+L N L+ N +K+ DFGL G + + + APE + +
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK- 434
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVRSM 242
+ ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P +++R+
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 494
Query: 243 LQVEPGKRIKIQDL 256
Q P R ++
Sbjct: 495 WQWNPSDRPSFAEI 508
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 406 SAPSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 462
+AP S Y + ++DVW+ GV+L+ + G P+ + Q+Y+ + E P P
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 484
Query: 463 NS-RQIVRSMLQVEPGKRIKIQDL 485
+++R+ Q P R ++
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEI 508
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++ G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 137 SNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQG-THYSVQSDIWSM 192
Query: 195 GVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS------RQIVRSMLQVEPG 248
G+ L + G P +I +L D I+N EPP P++ + V L P
Sbjct: 193 GLSLVEMAVGRYPRPPMAIFELLDYIVN----EPPPKLPSAVFSLEFQDFVNKCLIKNPA 248
Query: 249 KRIKIQDLLGHNWVK 263
+R ++ L+ H ++K
Sbjct: 249 ERADLKQLMVHAFIK 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 413 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS------RQ 466
+Y ++D+WSMG+ L + G P +I +L D I+N EPP P++ +
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN----EPPPKLPSAVFSLEFQD 237
Query: 467 IVRSMLQVEPGKRIKIQDLLGHNWVK 492
V L P +R ++ L+ H ++K
Sbjct: 238 FVNKCLIKNPAERADLKQLMVHAFIK 263
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 273 FRPDHELREKDDDVIKVMADHK---QLSPDDMWSQLNEWTYNYDTCTYLLLLSRKKQGKQ 329
R H++ +D ++ + + +L + QL + N T + + QG
Sbjct: 123 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQG-T 181
Query: 330 YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMP 372
+Y ++D+WSMG+ L + G P +I +L D I++ P
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPP 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++ Y G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 14 RTVGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
R +G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIV 77
Query: 70 KLFQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLG 126
K V ++ ++ +++E+ P G L +++ + ++R+ + + QI + YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQY 184
Y HRDL N+L++ +K+ DFGL P+ +++ SP + APE + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK- 196
Query: 185 YGSETDVWSMGVMLYALL 202
+ +DVWS GV+LY L
Sbjct: 197 FSVASDVWSFGVVLYELF 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 11 ILERTVGSGGFAKVKLATHVLTGE-KVAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
++ER +G+G F +V + + G KVA+K +K+ ++ D E N +K + HQ +
Sbjct: 13 LVER-LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLV 67
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGY 127
+L+ V+ T I+++ EY G L+D + +L + QI +A++ Y
Sbjct: 68 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HR+L+ N+L+ + K+ DFGL E + + + + APE I YG+
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN----YGT 182
Query: 188 ---ETDVWSMGVMLYALLC-GFLPF 208
++DVWS G++L ++ G +P+
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 29/285 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLA-THVLTGEK----VAIKIMKKAT--LGEDLPRVKLEINA 59
R+ +L+R +G G F KV LA + L E+ VA+K +K A+ +D R E
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAEL 68
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVER-------------QRLGEK 106
L ++ H+HI K + V + MV EY G+L + L +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 107 ESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT 166
+ +QI + + YL + HRDL N L+ N +K+ DFG+ ++
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 167 SCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
P + PE I ++ + +E+DVWS+GV+L+ + G P+ S +++ + I G+
Sbjct: 189 HTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247
Query: 225 YTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDL--LGHNWVKMGP 266
+ P P +++ Q EP R I+ + L N K P
Sbjct: 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 408 PSSKQY--YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 464
P S Y + +E+DVWS+GV+L+ + G P+ S +++ + I G+ + P P
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQE 258
Query: 465 -RQIVRSMLQVEPGKRIKIQDL--LGHNWVKMGP 495
+++ Q EP R I+ + L N K P
Sbjct: 259 VYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 76
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HRDL N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK-FS 195
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 30/279 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINA 59
R++ L + +G G F +V +A V + VA+K++K +DL + E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 60 LKHIS-HQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK---------ESR 109
+K I H++I L +++++ Y G L +++ R+ G + E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 AFFRQILS-------AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES 162
F+ ++S + YL HRDL NVL+ N +K+ DFGL A+ ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNIDY 212
Query: 163 QLQTSCGS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK 219
+T+ G + APE + + Y ++DVWS GV+++ + G P+ +++L+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 220 ILNGKYTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLL 257
+ G + P N ++R P +R + L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS-RQIVR 469
+ Y ++DVWS GV+++ + G P+ +++L+ + G + P N ++R
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 470 SMLQVEPGKRIKIQDLL 486
P +R + L+
Sbjct: 294 DCWHAVPSQRPTFKQLV 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 11 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V E G L D + + + + R I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 189 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 247
Query: 234 NS 235
+
Sbjct: 248 AA 249
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 38/266 (14%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV- 74
+G GGF V A + + AIK ++ +V E+ AL + H I + F
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 75 --------IETSS---HIFMVIEYCPGGELLDHIVERQRLGEKESRA---FFRQILSAVA 120
++ SS ++++ ++ C L D + R + E+E F QI AV
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 121 YLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-----------CG 169
+LH G HRDLKP N+ + +K+ DFGL + E Q + G
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 192
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTE 227
+ Y +PE I G Y + D++S+G++L+ LL PF + + + L D + N K+
Sbjct: 193 TKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL---YPFSTQMERVRTLTD-VRNLKF-- 245
Query: 228 PPWMS---PNSRQIVRSMLQVEPGKR 250
PP + P +V+ ML P +R
Sbjct: 246 PPLFTQKYPCEYVMVQDMLSPSPMER 271
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V E G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +GY HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS 235
+
Sbjct: 277 AA 278
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 133/300 (44%), Gaps = 29/300 (9%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+E VG G F V A + VAIK ++ + + +E+ L ++H +I KL
Sbjct: 12 VEEVVGRGAFGVVCKAK--WRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKL 66
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRL---GEKESRAFFRQILSAVAYLHHL--- 125
+ + +V+EY GG L + + + L + ++ Q VAYLH +
Sbjct: 67 YGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 126 GYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLKP N+LL LK+ DFG +++ + + GS + APEV +G Y
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHMTNNKGSAAWMAPEVFEGSNY 180
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
+ DV+S G++L+ ++ PFD ++ + NG T PP + + I M
Sbjct: 181 -SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRPPLIKNLPKPIESLM 237
Query: 243 LQV---EPGKRIKIQD---LLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQL 296
+ +P +R +++ ++ H D P+ + H L +D ++ D +
Sbjct: 238 TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVDFAEF 297
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 133/300 (44%), Gaps = 29/300 (9%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+E VG G F V A + VAIK ++ + + +E+ L ++H +I KL
Sbjct: 13 VEEVVGRGAFGVVCKAK--WRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKL 67
Query: 72 FQVIETSSHIFMVIEYCPGGELLDHIVERQRL---GEKESRAFFRQILSAVAYLHHL--- 125
+ + +V+EY GG L + + + L + ++ Q VAYLH +
Sbjct: 68 YGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 126 GYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLKP N+LL LK+ DFG +++ + + GS + APEV +G Y
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHMTNNKGSAAWMAPEVFEGSNY 181
Query: 185 YGSETDVWSMGVMLYALLCGFLPFD--SDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM 242
+ DV+S G++L+ ++ PFD ++ + NG T PP + + I M
Sbjct: 182 -SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRPPLIKNLPKPIESLM 238
Query: 243 LQV---EPGKRIKIQD---LLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQL 296
+ +P +R +++ ++ H D P+ + H L +D ++ D +
Sbjct: 239 TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVDFAEF 298
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 10/230 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +G G F +V + G++ VAIK +K + E + + H +I
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG 126
L V+ + ++ EY G L D + + R + R I S + YL +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQY 184
Y HRDL N+L++ N K+ DFG+ E E+ T G + APE I +++
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
S +DVWS G++++ ++ G P+ S + I G PP P
Sbjct: 191 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 10/230 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +G G F +V + G++ VAIK +K + E + + H +I
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG 126
L V+ + ++ EY G L D + + R + R I S + YL +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQY 184
Y HRDL N+L++ N K+ DFG+ E E+ T G + APE I +++
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
S +DVWS G++++ ++ G P+ S + I G PP P
Sbjct: 197 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK--VAIKIMKKATLGEDLPRVKLEINALKHI 63
R +L R +G G F +V + GEK VA+K KK ++ + E +K++
Sbjct: 7 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK--ESRAFFRQILSAVAY 121
H HI KL +IE ++++E P GEL H +ER + K + QI A+AY
Sbjct: 67 DHPHIVKLIGIIEEEP-TWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
L + HRD+ N+L+ + +KL DFGL E + + + +PE I
Sbjct: 125 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPF 208
++ + + +DVW V ++ +L G PF
Sbjct: 185 RR-FTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 16 VGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKL 71
+G G F V++ + TGE VA+K ++ +T E L + EI LK + H +I K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKY 77
Query: 72 FQVIETSS--HIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
V ++ ++ +++EY P G L D++ + ++R+ + + QI + YL Y
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 137
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSPNY-AAPEVIKGKQYYG 186
HR+L N+L++ +K+ DFGL P+ +++ SP + APE + + +
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK-FS 196
Query: 187 SETDVWSMGVMLYALL 202
+DVWS GV+LY L
Sbjct: 197 VASDVWSFGVVLYELF 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK--VAIKIMKKATLGEDLPRVKLEINALKHI 63
R +L R +G G F +V + GEK VA+K KK ++ + E +K++
Sbjct: 23 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK--ESRAFFRQILSAVAY 121
H HI KL +IE ++++E P GEL H +ER + K + QI A+AY
Sbjct: 83 DHPHIVKLIGIIEEEP-TWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
L + HRD+ N+L+ + +KL DFGL E + + + +PE I
Sbjct: 141 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPF 208
++ + + +DVW V ++ +L G PF
Sbjct: 201 RR-FTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 7 RNQYILERTVGSGGFAKVKLATHV-LTGEK--VAIKIMKKATLGEDLPRVKLEINALKHI 63
R +L R +G G F +V + GEK VA+K KK ++ + E +K++
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 64 SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEK--ESRAFFRQILSAVAY 121
H HI KL +IE ++++E P GEL H +ER + K + QI A+AY
Sbjct: 71 DHPHIVKLIGIIEEEP-TWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
L + HRD+ N+L+ + +KL DFGL E + + + +PE I
Sbjct: 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPF 208
++ + + +DVW V ++ +L G PF
Sbjct: 189 RR-FTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 10/238 (4%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEK--VAIKIMKKATLGEDLPRVKLEINAL 60
++ N I + +G G F V+ + + ++ VAIK++K+ T D + E +
Sbjct: 331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 390
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAV 119
+ + +I +L V + + + +V+E GG L +V +R+ + Q+ +
Sbjct: 391 HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449
Query: 120 AYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP---NYAAP 176
YL + HR+L NVLL K+ DFGL +K G +S + AP
Sbjct: 450 KYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL-SKALGADDSYYTARSAGKWPLKWYAP 508
Query: 177 EVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
E I ++ + S +DVWS GV ++ AL G P+ ++ I GK E P P
Sbjct: 509 ECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP 565
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +GSG +V + G++ VAIK +K E + + H +I
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAVAYLHHL 125
+L V+ +V EY G L + R G+ + R + + + YL L
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQ 183
GY HRDL NVL+D N K+ DFGL E ++ T+ G + APE I +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 184 YYGSETDVWSMGVMLYALLC 203
+ S +DVWS GV+++ +L
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +GSG +V + G++ VAIK +K E + + H +I
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAVAYLHHL 125
+L V+ +V EY G L + R G+ + R + + + YL L
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQ 183
GY HRDL NVL+D N K+ DFGL E ++ T+ G + APE I +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 184 YYGSETDVWSMGVMLYALLC 203
+ S +DVWS GV+++ +L
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 34/276 (12%)
Query: 14 RTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALKHI-SHQH 67
+ +GSG F KV AT + +VA+K++K+ + + E+ + + SH++
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 68 ICKLFQVIETSSHIFMVIEYCPGGELLDHI-VERQRLGEKESR----------------- 109
I L S I+++ EYC G+LL+++ +R++ E E
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 110 -----AFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
F Q+ + +L HRDL NVL+ + +K+ DFGL +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKIL 221
+ + P + APE + + Y ++DVWS G++L+ + G P+ +D Y I
Sbjct: 231 RGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ 289
Query: 222 NG-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDL 256
NG K +P + + I++S + KR +L
Sbjct: 290 NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 6 LRNQYILERTVGSGGFAKVKLAT---HVLTGEKVAIKIMKKATLGEDLP-RVKLEINALK 61
L N + +E +G G F+ V LAT V EK+A+K + + P R+ E+ L
Sbjct: 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL----IPTSHPIRIAAELQCLT 74
Query: 62 HISHQ-HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVA 120
Q ++ + + H+ + + Y LD + L +E R + + A+
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALK 131
Query: 121 YLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLC-------------AKPEGGLESQLQT 166
+H G HRD+KP N L +R + L+DFGL + E E Q
Sbjct: 132 RIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 167 SC--------------GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
C G+P + APEV+ + D+WS GV+ +LL G PF S
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 213 ID 214
D
Sbjct: 252 DD 253
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 151/365 (41%), Gaps = 90/365 (24%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALKH-- 62
+YIL R +G G F+ V LA ++ VA+KI++ + ED ++ +N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 63 ---ISHQHICKLFQVIE----TSSHIFMVIEYCPGGELLDHIVERQRLGEK--ESRAFFR 113
+ HI KL H+ MV E G LL I + + G + +
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISK 138
Query: 114 QILSAVAYLHH-LGYAHRDLKPENVLL---DRNQNL---KLIDFGLCAKPEGGLESQLQT 166
Q+L + Y+H G H D+KPENVL+ D +NL K+ D G + + +QT
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT 198
Query: 167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF----------DSDSIDQL 216
Y +PEV+ G +G D+WS +++ L+ G F D D I Q+
Sbjct: 199 R----EYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 217 YD--------KILNGKYTEPPWMSPNSRQIVRS--------------------------- 241
+ + NGKYT + NSR ++R+
Sbjct: 254 IELLGELPSYLLRNGKYTRTFF---NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 242 ------MLQVEPGKRIKIQDLLGHNWVK--MGPEDNPVSFRPDHELREKDDDV---IKVM 290
MLQ++P KR L+ H W+K +G E+ V PD EL D+ + +
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV---PDRELYGSGSDIPGWFEEV 367
Query: 291 ADHKQ 295
DHK+
Sbjct: 368 RDHKR 372
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V V GE V AIKI+ + T + E + + H H+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L V S I +V + P G LL+++ E + +G + + QI + YL
Sbjct: 81 RLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ ++K+ DFGL EG E + G + A E I +++
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGD-EKEYNADGGKMPIKWMALECIHYRKFT- 197
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ D + G + +PP + + ++
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWM 257
Query: 245 VEPGKRIKIQDL 256
++ R K ++L
Sbjct: 258 IDADSRPKFKEL 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 25/265 (9%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSM 189
Query: 195 GVMLYALLCGFLPF-------DSD---SIDQLYDKILNGKYTEPPWMSPNS------RQI 238
G+ L + G P DS +I +L D I+N EPP P+ +
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVN----EPPPKLPSGVFSLEFQDF 245
Query: 239 VRSMLQVEPGKRIKIQDLLGHNWVK 263
V L P +R ++ L+ H ++K
Sbjct: 246 VNKCLIKNPAERADLKQLMVHAFIK 270
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 25/122 (20%)
Query: 392 GQVINLLRSAIVLCSAPSSKQ-----YYGSETDVWSMGVMLYALLCGFLPF-------DS 439
GQ+I+ + ++ V + S + +Y ++D+WSMG+ L + G P DS
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
Query: 440 D---SIDQLYDKILNGKYTEPPWMSPNS------RQIVRSMLQVEPGKRIKIQDLLGHNW 490
+I +L D I+N EPP P+ + V L P +R ++ L+ H +
Sbjct: 213 RPPMAIFELLDYIVN----EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 268
Query: 491 VK 492
+K
Sbjct: 269 IK 270
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 151/365 (41%), Gaps = 90/365 (24%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALKH-- 62
+YIL R +G G F+ V LA ++ VA+KI++ + ED ++ +N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 63 ---ISHQHICKLFQVIE----TSSHIFMVIEYCPGGELLDHIVERQRLGEK--ESRAFFR 113
+ HI KL H+ MV E G LL I + + G + +
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISK 138
Query: 114 QILSAVAYLHH-LGYAHRDLKPENVLL---DRNQNL---KLIDFGLCAKPEGGLESQLQT 166
Q+L + Y+H G H D+KPENVL+ D +NL K+ D G + + +QT
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT 198
Query: 167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF----------DSDSIDQL 216
Y +PEV+ G +G D+WS +++ L+ G F D D I Q+
Sbjct: 199 R----EYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 217 YD--------KILNGKYTEPPWMSPNSRQIVRS--------------------------- 241
+ + NGKYT + NSR ++R+
Sbjct: 254 IELLGELPSYLLRNGKYTRTFF---NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 242 ------MLQVEPGKRIKIQDLLGHNWVK--MGPEDNPVSFRPDHELREKDDDV---IKVM 290
MLQ++P KR L+ H W+K +G E+ V PD EL D+ + +
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV---PDRELYGSGSDIPGWFEEV 367
Query: 291 ADHKQ 295
DHK+
Sbjct: 368 RDHKR 372
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL---PRVKLEI 57
+K + + + YI++ +G G + V LA T + VAIK K + EDL R+ EI
Sbjct: 19 IKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK--KVNRMFEDLIDCKRILREI 76
Query: 58 NALKHISHQHICKLFQVIETSS-----HIFMVIEYCPGGELLDHIVERQRLGEKESRAFF 112
L + +I +L+ +I +++V+E +L L E+ +
Sbjct: 77 TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTIL 135
Query: 113 RQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC----------------AKP 156
+L ++H G HRDLKP N LL+++ ++K+ DFGL
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 157 EGG-----LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL 202
E G L+ QL + + Y APE+I ++ Y D+WS G + LL
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 458 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVIKVMADHKQL 517
P +S + ++ SML+ P KRI I L H ++K +R+K ++ + K +
Sbjct: 332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLK------DVRKKK---LENFSTKKII 382
Query: 518 SPDDMWSQLNEWTYNY 533
P D W L+E Y
Sbjct: 383 LPFDDWMVLSETQLRY 398
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
P +S + ++ SML+ P KRI I L H ++K
Sbjct: 332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 64/307 (20%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK-LEINALKHISHQH 67
+Y L +T+G+G F V + +G++ A+K + + PR K E++ +K + H +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD------PRYKNRELDIMKVLDHVN 61
Query: 68 ICKLFQVIETSS--------------------------------------HIFMVIEYCP 89
I KL T+ ++ +++EY P
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 90 GG--ELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-L 145
++L + R + + Q+ AV ++H LG HRD+KP+N+L++ N L
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 146 KLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGF 205
KL DFG AK E + C S Y APE++ G Y D+WS+G + L+ G
Sbjct: 182 KLCDFG-SAKKLIPSEPSVAXIC-SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 206 LPFDSD-SIDQLYDKI-LNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK 263
F + SIDQL I + G +P Q++R ++ L +W K
Sbjct: 240 PLFSGETSIDQLVRIIQIMG--------TPTKEQMIRMNPHY---TEVRFPTLKAKDWRK 288
Query: 264 MGPEDNP 270
+ PE P
Sbjct: 289 ILPEGTP 295
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 100 RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEG 158
RQ L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 159 GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
G E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 185 GQEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 11/224 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEK----VAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GE V IK+++ + + V + A+ + H HI
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + SS + +V +Y P G LLDH+ + R LG + + QI + YL G
Sbjct: 79 RLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIK-GKQYYG 186
HR+L NVLL +++ DFG+ + L + +P + A E I GK Y
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK--YT 195
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 229
++DVWS GV ++ L+ G P+ + ++ D + G+ P
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP 239
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 11/224 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEK----VAIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V + GE V IK+++ + + V + A+ + H HI
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L + SS + +V +Y P G LLDH+ + R LG + + QI + YL G
Sbjct: 97 RLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP-NYAAPEVIK-GKQYYG 186
HR+L NVLL +++ DFG+ + L + +P + A E I GK Y
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK--YT 213
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 229
++DVWS GV ++ L+ G P+ + ++ D + G+ P
Sbjct: 214 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALK 61
RN+ +T+G+G F KV AT VA+K++K + + + E+ L
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 62 HI-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRA------- 110
++ +H +I L ++ EYC G+LL+ + R+R + K S A
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDEL 163
Query: 111 ---------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE 161
F Q+ +A+L HRDL N+LL + K+ DFGL +
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 162 SQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYD 218
++ + P + APE I Y E+DVWS G+ L+ L G P+ +D + Y
Sbjct: 224 YVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 219 KILNGKYTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLL 257
I G P +P I+++ +P KR + ++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGKYTEPPWMSPNSR-QIVRS 470
Y E+DVWS G+ L+ L G P+ +D + Y I G P +P I+++
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 471 MLQVEPGKRIKIQDLL 486
+P KR + ++
Sbjct: 307 CWDADPLKRPTFKQIV 322
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALK 61
RN+ +T+G+G F KV AT VA+K++K + + + E+ L
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 62 HI-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRA------- 110
++ +H +I L ++ EYC G+LL+ + R+R + K S A
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDEL 163
Query: 111 ---------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE 161
F Q+ +A+L HRDL N+LL + K+ DFGL +
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 162 SQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYD 218
++ + P + APE I Y E+DVWS G+ L+ L G P+ +D + Y
Sbjct: 224 YVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 219 KILNGKYTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLL 257
I G P +P I+++ +P KR + ++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGKYTEPPWMSPNSR-QIVRS 470
Y E+DVWS G+ L+ L G P+ +D + Y I G P +P I+++
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 471 MLQVEPGKRIKIQDLL 486
+P KR + ++
Sbjct: 307 CWDADPLKRPTFKQIV 322
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKV--AIKIMKKATLGEDLPRVKLEINALKHISH 65
N + +G G F +V A G ++ AIK MK+ +D E+ L + H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 66 Q-HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA-------------- 110
+I L E ++++ IEY P G LLD + + + L + A
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 111 --FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC 168
F + + YL + HRDL N+L+ N K+ DFGL G E ++ +
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 200
Query: 169 GS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 225
G + A E + Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G
Sbjct: 201 GRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
Query: 226 TEPP 229
E P
Sbjct: 260 LEKP 263
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 458
Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G E P
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKI 366
Y + +DVWS GV+L+ ++ G P+ + +LY+K+
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALK 61
RN+ +T+G+G F KV AT VA+K++K + + + E+ L
Sbjct: 40 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 99
Query: 62 HI-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRA------- 110
++ +H +I L ++ EYC G+LL+ + R+R + K S A
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDEL 158
Query: 111 ---------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE 161
F Q+ +A+L HRDL N+LL + K+ DFGL +
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 162 SQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYD 218
++ + P + APE I Y E+DVWS G+ L+ L G P+ +D + Y
Sbjct: 219 YVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 277
Query: 219 KILNGKYTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLL 257
I G P +P I+++ +P KR + ++
Sbjct: 278 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGKYTEPPWMSPNSR-QIVRS 470
Y E+DVWS G+ L+ L G P+ +D + Y I G P +P I+++
Sbjct: 242 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 301
Query: 471 MLQVEPGKRIKIQDLL 486
+P KR + ++
Sbjct: 302 CWDADPLKRPTFKQIV 317
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDLPRVKLEINALKHISHQ 66
++Y + +G+G + V A L VAIK I++ D R+ EI L ++H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 67 HICKLFQVI-----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
H+ K+ ++ E +++V+E + L E + +L V Y
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY 171
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK---PEGG------------------- 159
+H G HRDLKP N L++++ ++K+ DFGL PE G
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 160 ----LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL 202
L+ QL + Y APE+I ++ Y DVWS+G + LL
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALK 61
RN+ +T+G+G F KV AT VA+K++K + + + E+ L
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 62 HI-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRA------- 110
++ +H +I L ++ EYC G+LL+ + R+R + K S A
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDEL 140
Query: 111 ---------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE 161
F Q+ +A+L HRDL N+LL + K+ DFGL +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 162 SQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYD 218
++ + P + APE I Y E+DVWS G+ L+ L G P+ +D + Y
Sbjct: 201 YVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259
Query: 219 KILNGKYTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLL 257
I G P +P I+++ +P KR + ++
Sbjct: 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKV--AIKIMKKATLGEDLPRVKLEINALKHISH 65
N + +G G F +V A G ++ AIK MK+ +D E+ L + H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 66 Q-HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA-------------- 110
+I L E ++++ IEY P G LLD + + + L + A
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 111 --FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC 168
F + + YL + HRDL N+L+ N K+ DFGL G E ++ +
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 190
Query: 169 GS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 225
G + A E + Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G
Sbjct: 191 GRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
Query: 226 TEPP 229
E P
Sbjct: 250 LEKP 253
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 458
Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G E P
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 253
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKI 366
Y + +DVWS GV+L+ ++ G P+ + +LY+K+
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALK 61
RN+ +T+G+G F KV AT VA+K++K + + + E+ L
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 97
Query: 62 HI-SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRA------- 110
++ +H +I L ++ EYC G+LL+ + R+R + K S A
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDEL 156
Query: 111 ---------FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE 161
F Q+ +A+L HRDL N+LL + K+ DFGL +
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 162 SQLQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYD 218
++ + P + APE I Y E+DVWS G+ L+ L G P+ +D + Y
Sbjct: 217 YVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 275
Query: 219 KILNGKYTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLL 257
I G P +P I+++ +P KR + ++
Sbjct: 276 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEIN 58
K +D N I ++ VG+G F +V L +K VAIK +K + E +
Sbjct: 40 KELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQIL 116
+ H +I +L V+ S + +V E G L D + + + + R I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYA 174
S + YL +G HRDL N+L++ N K+ DFGL E E+ T G +
Sbjct: 158 SGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
+PE I +++ S +DVWS G++L+ ++ G P+ S + + G PP P
Sbjct: 218 SPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276
Query: 234 NS 235
+
Sbjct: 277 AA 278
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 14 RTVGSGGFAKVKLATHVLTGEKV----AIKIMKKATLGEDLPRVKLEINALKHISHQHIC 69
+ +GSG F V V GE V AIKI+ + T + E + + H H+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 70 KLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYA 128
+L V S I +V + P G LL+++ E + +G + + QI + YL
Sbjct: 104 RLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 129 HRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP--NYAAPEVIKGKQYYG 186
HRDL NVL+ ++K+ DFGL EG E + G + A E I +++
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGD-EKEYNADGGKMPIKWMALECIHYRKFT- 220
Query: 187 SETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQ 244
++DVWS GV ++ L+ G P+D ++ D + G + +PP + + ++
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWM 280
Query: 245 VEPGKRIKIQDL 256
++ R K ++L
Sbjct: 281 IDADSRPKFKEL 292
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +G+G F +V L G++ VAIK +K + E + + H ++
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAVAYLHHL 125
L V+ S+ + ++ E+ G L + RQ G+ + R I + + YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN----YAAPEVIKG 181
Y HRDL N+L++ N K+ DFGL E TS + APE I+
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWM 231
+++ S +DVWS G++++ ++ G P+ D +Q + Y PP M
Sbjct: 215 RKFT-SASDVWSYGIVMWEVMSYGERPY-WDMTNQDVINAIEQDYRLPPPM 263
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 8 NQYILERTVGSGGFAKVKLA-THVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
QY ++ + GG + LA + G V +K + + E E L + H
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHP 139
Query: 67 HICKLFQVIE-TSSHI----FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAY 121
I ++F +E T H ++V+EY GG+ L + Q+L E+ A+ +IL A++Y
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR-SKGQKLPVAEAIAYLLEILPALSY 197
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKG 181
LH +G + DLKPEN++L Q LKLID G ++ + G+P + APE+++
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSR-----INSFGYLYGTPGFQAPEIVRT 251
Query: 182 KQYYGSETDVWSMGVMLYAL 201
TD++++G L AL
Sbjct: 252 GPTVA--TDIYTVGRTLAAL 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 10/230 (4%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +G G F +V + G++ VAIK +K + E + + H +I
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG 126
L V+ + ++ EY G L D + + R + R I S + YL +
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS--PNYAAPEVIKGKQY 184
HRDL N+L++ N K+ DFG+ E E+ T G + APE I +++
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 185 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP 233
S +DVWS G++++ ++ G P+ S + I G PP P
Sbjct: 212 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 260
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 15/251 (5%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V TG + A+K ++ + E+ A ++ I L+ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE------ELMACAGLTSPRIVPLYGAV 154
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ + +E GG L + E+ L E + + Q L + YLH H D+K +
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 214
Query: 136 NVLLDRN-QNLKLIDFG--LCAKPEGGLESQLQTS--CGSPNYAAPEVIKGKQYYGSETD 190
NVLL + + L DFG +C +P+G +S L G+ + APEV+ G+ ++ D
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CDAKVD 273
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQIVRSMLQVEP 247
VWS M+ +L G P+ L KI + PP +P + Q ++ L+ EP
Sbjct: 274 VWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEP 333
Query: 248 GKRIKIQDLLG 258
R+ +L G
Sbjct: 334 IHRVSAAELGG 344
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 17/252 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V TG + A+K ++ + E+ A ++ I L+ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE------ELMACAGLTSPRIVPLYGAV 135
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ + +E GG L + E+ L E + + Q L + YLH H D+K +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 195
Query: 136 NVLLDRN-QNLKLIDFG--LCAKPEGGLESQLQTS---CGSPNYAAPEVIKGKQYYGSET 189
NVLL + + L DFG +C +P+ GL L T G+ + APEV+ G+ ++
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPD-GLGKDLLTGDYIPGTETHMAPEVVLGRS-CDAKV 253
Query: 190 DVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQIVRSMLQVE 246
DVWS M+ +L G P+ L KI + PP +P + Q ++ L+ E
Sbjct: 254 DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKE 313
Query: 247 PGKRIKIQDLLG 258
P R+ +L G
Sbjct: 314 PIHRVSAAELGG 325
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NVL+D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L+N + E+ +G G V G VA+K M L +KL + H
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDFCDIALMEIKLLTES---DDH 68
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--------AFFRQILS 117
++ + + T +++ +E C L +VE + + ++ + + RQI S
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRN-----------QNLKLI--DFGLCAKPEGG---LE 161
VA+LH L HRDLKP+N+L+ + +NL+++ DFGLC K + G
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 162 SQLQTSCGSPNYAAPEV------IKGKQYYGSETDVWSMGVMLYALLC-GFLPF 208
+ L G+ + APE+ ++ K+ D++SMG + Y +L G PF
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 20/228 (8%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDLPRVKLEINALKHISHQ 66
+++ +ER G G F V+L TG VAIK +++ ++ ++ L H +
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIV 82
Query: 67 HICKLFQVI----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKES------RAFFRQIL 116
+ F + ++ +V+EY P H R + + + F Q++
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTL---HRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 117 SAVAYLH--HLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNY 173
++ LH + HRD+KP NVL++ + LKL DFG AK E + C S Y
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG-SAKKLSPSEPNVAYIC-SRYY 197
Query: 174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKI 220
APE+I G Q+Y + D+WS+G + ++ G F D S QL++ +
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L+N + E+ +G G V G VA+K M L +KL + H
Sbjct: 31 LKNLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDFCDIALMEIKLLTES---DDH 86
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--------AFFRQILS 117
++ + + T +++ +E C L +VE + + ++ + + RQI S
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRN-----------QNLKLI--DFGLCAKPEGG---LE 161
VA+LH L HRDLKP+N+L+ + +NL+++ DFGLC K + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 162 SQLQTSCGSPNYAAPEVIK--GKQYYGSETDVWSMGVMLYALLC-GFLPF 208
L G+ + APE+++ K+ D++SMG + Y +L G PF
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L+N + E+ +G G V G VA+K M L +KL + H
Sbjct: 31 LKNLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDFCDIALMEIKLLTES---DDH 86
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--------AFFRQILS 117
++ + + T +++ +E C L +VE + + ++ + + RQI S
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRN-----------QNLKLI--DFGLCAKPEGG---LE 161
VA+LH L HRDLKP+N+L+ + +NL+++ DFGLC K + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 162 SQLQTSCGSPNYAAPEVIK--GKQYYGSETDVWSMGVMLYALLC-GFLPF 208
L G+ + APE+++ K+ D++SMG + Y +L G PF
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 136/321 (42%), Gaps = 52/321 (16%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 13 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 125
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 223
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPVSFRPDHELREKDDDV 286
QI+ + + G+R+ I +++ W PED P L E
Sbjct: 224 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAHK-PEDRPTFVALRDFLLEAQPTD 280
Query: 287 IKVMADHKQLSPDDMWSQLNE 307
++ + D ++ PD + Q+N+
Sbjct: 281 MRALQDFEE--PDKLHIQMND 299
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 184 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 52/316 (16%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
DL ++Y+ + +G GG V A ++VAIK + T + + EI ++ +
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV-LTDPQSVKHALREIKIIRRLD 66
Query: 65 HQHICKLFQVIETS--------------SHIFMVIEYCPGGELLDHIVERQRLGEKESRA 110
H +I K+F+++ S + +++V EY L +++E+ L E+ +R
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARL 124
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLD-RNQNLKLIDFGLC--AKPEGGLESQLQTS 167
F Q+L + Y+H HRDLKP N+ ++ + LK+ DFGL P + L
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-----------DSIDQL 216
+ Y +P ++ Y D+W+ G + +L G F +SI +
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 217 YDK-----------ILNGKYTEP--------PWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
+++ + TEP P +S + + +L P R+ ++ L
Sbjct: 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304
Query: 258 GHNWVKM--GPEDNPV 271
H ++ + P D P+
Sbjct: 305 SHPYMSIYSFPMDEPI 320
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 185 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 131 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 190
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 191 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 185 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKV--AIKIMKKATLGEDLPRVKLEINALKHISH 65
N + +G G F +V A G ++ AIK MK+ +D E+ L + H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 66 Q-HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRA-------------- 110
+I L E ++++ IEY P G LLD + + + L + A
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 111 --FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC 168
F + + YL + HR+L N+L+ N K+ DFGL G E ++ +
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 197
Query: 169 GS--PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 225
G + A E + Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G
Sbjct: 198 GRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
Query: 226 TEPP 229
E P
Sbjct: 257 LEKP 260
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 458
Y + +DVWS GV+L+ ++ G P+ + +LY+K+ G E P
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 260
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKI 366
Y + +DVWS GV+L+ ++ G P+ + +LY+K+
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGG 159
Q L + + R + +IL A+ Y H +G HRD+KP NV++D ++ L+LID+GL G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 186 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L+N + E+ +G G V G VA+K M L +KL + H
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDFCDIALMEIKLLTES---DDH 68
Query: 66 QHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR--------AFFRQILS 117
++ + + T +++ +E C L +VE + + ++ + + RQI S
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRN-----------QNLKLI--DFGLCAKPEGG---LE 161
VA+LH L HRDLKP+N+L+ + +NL+++ DFGLC K + G
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 162 SQLQTSCGSPNYAAPEV------IKGKQYYGSETDVWSMGVMLYALLC-GFLPF 208
L G+ + APE+ ++ K+ D++SMG + Y +L G PF
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 34/276 (12%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
Y+ + +G GGF+ V L + G A+K + +D + E + + +H +I
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL-CHEQQDREEAQREADMHRLFNHPNI 88
Query: 69 CKLFQVI----ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL-------S 117
+L ++++ + G L + I +RL +K + QIL
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGICR 145
Query: 118 AVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFG----LCAKPEGG-----LESQLQTSC 168
+ +H GYAHRDLKP N+LL L+D G C EG L+ C
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 169 GSPNYAAPEVIKGKQY--YGSETDVWSMGVMLYALLCGFLPFD-----SDSIDQLYDKIL 221
+ +Y APE+ + + TDVWS+G +LYA++ G P+D DS+ L
Sbjct: 206 -TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264
Query: 222 NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
+ + P S Q++ SM+ V+P +R I LL
Sbjct: 265 S--IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 418 TDVWSMGVMLYALLCGFLPFD-----SDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
TDVWS+G +LYA++ G P+D DS+ L+ + P S Q++ SM+
Sbjct: 227 TDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS--IPQSPRHSSALWQLLNSMM 284
Query: 473 QVEPGKRIKIQDLL 486
V+P +R I LL
Sbjct: 285 TVDPHQRPHIPLLL 298
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 262 VKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLL 321
+ +G E PV +L + I V + L+ L +W T +Y
Sbjct: 165 ILLGDEGQPVLM----DLGSMNQACIHVEGSRQALT-------LQDWAAQRCTISYRAPE 213
Query: 322 SRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFD 355
Q TDVWS+G +LYA++ G P+D
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E+ +G+G F +V L G++ VAIK +K + E + + H ++
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAVAYLHHL 125
L V+ S+ + ++ E+ G L + RQ G+ + R I + + YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 126 GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN----YAAPEVIKG 181
Y HR L N+L++ N K+ DFGL E TS + APE I+
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 182 KQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWM 231
+++ S +DVWS G++++ ++ G P+ D +Q + Y PP M
Sbjct: 189 RKFT-SASDVWSYGIVMWEVMSYGERPY-WDMTNQDVINAIEQDYRLPPPM 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E +G+G F +V G+K VAIK +K E + + H +I
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-----AFFRQILSAVAYLH 123
+L V+ S + ++ E+ G L + RL + + R I S + YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCA-KPEGGLESQLQTSCGSP---NYAAPEVI 179
+ Y HRDL N+L++ N K+ DFGL E + +S G + APE I
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 180 KGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 235
+++ S +D WS G++++ ++ G P+ S + + I PP P S
Sbjct: 194 AFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS 249
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 30/229 (13%)
Query: 49 DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKES 108
D P VK I + S ++ Q ++++ ++ C L D + R L ++E
Sbjct: 106 DAPSVK--IRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163
Query: 109 RA---FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ 165
F QI AV +LH G HRDLKP N+ + +K+ DFGL + E Q
Sbjct: 164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 166 TS-----------CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGF------LPF 208
+ G+ Y +PE I G Y + D++S+G++L+ LL F +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 209 DSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLL 257
+D + + + KY P +V+ ML P +R + D++
Sbjct: 283 ITDVRNLKFPLLFTQKY-------PQEHMMVQDMLSPSPTERPEATDII 324
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 12 LERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+E +G+G F +V G+K VAIK +K E + + H +I
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESR-----AFFRQILSAVAYLH 123
+L V+ S + ++ E+ G L + RL + + R I S + YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 124 HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN----YAAPEVI 179
+ Y HRDL N+L++ N K+ DFGL E +TS + APE I
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 180 KGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS 235
+++ S +D WS G++++ ++ G P+ S + + I PP P S
Sbjct: 196 AFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS 251
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 39/248 (15%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 9 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 121
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 219
Query: 235 SRQIVRSM 242
QI+ +
Sbjct: 220 GSQILHKI 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 24/276 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 26 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR------------LGEKE 107
HI H ++ L MVI E+C G L ++ ++ L +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 108 SRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS 167
+ Q+ + +L HRDL N+LL +K+ DFGL + +
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 168 CGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NG 223
P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 206 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT 264
Query: 224 KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 221 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTM 280
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 281 LDCWHGEPSQRPTFSELVEH 300
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 50/285 (17%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 9 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 121
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 219
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPV 271
QI+ + + G+R+ I +++ W PED P
Sbjct: 220 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAHK-PEDRPT 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 50/285 (17%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 19 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 131
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + + +D W GV L+ + Y + PW+ N
Sbjct: 192 APESLKTRTFSHA-SDTWMFGVTLWEMFT---------------------YGQEPWIGLN 229
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPV 271
QI+ + + G+R+ I +++ W PED P
Sbjct: 230 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAHK-PEDRPT 271
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 113/278 (40%), Gaps = 26/278 (9%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR--------------LGE 105
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 106 KESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ 165
+ + Q+ + +L HRDL N+LL +K+ DFGL + +
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 166 TSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL-- 221
P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 208 GDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 222 NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 50/285 (17%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 13 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 125
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 223
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPV 271
QI+ + + G+R+ I +++ W PED P
Sbjct: 224 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAHK-PEDRPT 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 50/285 (17%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 9 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 121
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 219
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPV 271
QI+ + + G+R+ I +++ W PED P
Sbjct: 220 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAH-KPEDRPT 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 24/276 (8%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 26 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR------------LGEKE 107
HI H ++ L MVI E+C G L ++ ++ L +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 108 SRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS 167
+ Q+ + +L HRDL N+LL +K+ DFGL + +
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 168 CGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NG 223
P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 206 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 264
Query: 224 KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 221 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 280
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 281 LDCWHGEPSQRPTFSELVEH 300
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 27/279 (9%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 27 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQ------RLGEKESRAFFR 113
HI H ++ L MVI E+C G L ++ ++ + E + F
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 114 ---------QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL 164
Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 165 QTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL- 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 207 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 222 -NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQV 74
+G G F +V H +VAI+++ ED L K E+ A + H+++
Sbjct: 41 IGKGRFGQV---YHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 75 IETSSHIFMVIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLK 133
+ H+ ++ C G L + + + L ++R ++I+ + YLH G H+DLK
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK 157
Query: 134 PENVLLDRNQNLKLIDFGLCAKP----EGGLESQLQTSCGSPNYAAPEVIK--------G 181
+NV D N + + DFGL + G E +L+ G + APE+I+
Sbjct: 158 SKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEED 216
Query: 182 KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQI 238
K + +DV+++G + Y L PF + + + ++ G M PN QI
Sbjct: 217 KLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG-------MKPNLSQI 266
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 50/285 (17%)
Query: 5 DLRNQYILERTVGSGGFAKVKLATHVLTGEK---VAIKIMKKATLG--EDLPRVKLEINA 59
DLR +LE+ +G G F V+ K VA+K +K L E + E+NA
Sbjct: 19 DLR---LLEK-LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 60 LKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR---LGEKESRAFFRQIL 116
+ + H+++ +L+ V+ T + MV E P G LLD + + Q LG A Q+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVA 131
Query: 117 SAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC-AKPEGGLESQLQTSCGSP-NYA 174
+ YL + HRDL N+LL +K+ DFGL A P+ +Q P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 175 APEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN 234
APE +K + + +D W GV L+ + Y + PW+ N
Sbjct: 192 APESLKTRT-FSHASDTWMFGVTLWEMFT---------------------YGQEPWIGLN 229
Query: 235 SRQIVRSMLQVEPGKRI--------KIQDLLGHNWVKMGPEDNPV 271
QI+ + + G+R+ I +++ W PED P
Sbjct: 230 GSQILHKI--DKEGERLPRPEDCPQDIYNVMVQCWAHK-PEDRPT 271
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 275
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 276 LDCWHGEPSQRPTFSELVEH 295
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK-VAIKIMKKATLGEDLPRVKL-EINALKHIS- 64
QY +G G + KV A + G + VA+K ++ T E +P + E+ L+H+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 65 --HQHICKLFQVIETS-----SHIFMVIEYCPG--GELLDHIVERQRLGEKESRAFFRQI 115
H ++ +LF V S + + +V E+ LD + E E F Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QL 129
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
L + +LH HRDLKP+N+L+ + +KL DFGL + L + + Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRA 187
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILN 222
PEV+ + Y + D+WS+G + + F S +DQL KIL+
Sbjct: 188 PEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKILD 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 1 MKYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL---PRVKLEI 57
+K + + + Y ++ +G G + V LA + VAIK K + EDL R+ EI
Sbjct: 21 IKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK--KVNRMFEDLIDCKRILREI 78
Query: 58 NALKHISHQHICKLFQVIETSS-----HIFMVIEYCPGGELLDHIVERQRLGEKESRAFF 112
L + +I +L +I +++V+E +L L E+ +
Sbjct: 79 TILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEQHVKTIL 137
Query: 113 RQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG-------------- 158
+L ++H G HRDLKP N LL+++ ++K+ DFGL
Sbjct: 138 YNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 159 ----------GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL 202
L+ QL + + Y APE+I ++ Y + D+WS G + LL
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 275
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 276 LDCWHGEPSQRPTFSELVEH 295
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 15/249 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
VG G F +V TG + A+K ++ RV+ E+ A +S I L+ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVE-ELVACAGLSSPRIVPLYGAV 119
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ + +E GG L I + L E + + Q L + YLH H D+K +
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 136 NVLLDRN-QNLKLIDFG--LCAKPEGGLESQLQTSC--GSPNYAAPEVIKGKQYYGSETD 190
NVLL + L DFG LC +P+G +S L G+ + APEV+ GK ++ D
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVD 238
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM---SPNSRQIVRSMLQVEP 247
+WS M+ +L G P+ L KI + +P + Q ++ L+ EP
Sbjct: 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEP 298
Query: 248 GKRIKIQDL 256
R +L
Sbjct: 299 VHRASAMEL 307
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK-VAIKIMKKATLGEDLPRVKL-EINALKHIS- 64
QY +G G + KV A + G + VA+K ++ T E +P + E+ L+H+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 65 --HQHICKLFQVIETS-----SHIFMVIEYCPG--GELLDHIVERQRLGEKESRAFFRQI 115
H ++ +LF V S + + +V E+ LD + E E F Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QL 129
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
L + +LH HRDLKP+N+L+ + +KL DFGL + L + + Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRA 187
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILN 222
PEV+ + Y + D+WS+G + + F S +DQL KIL+
Sbjct: 188 PEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKILD 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEK-VAIKIMKKATLGEDLPRVKL-EINALKHIS- 64
QY +G G + KV A + G + VA+K ++ T E +P + E+ L+H+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 65 --HQHICKLFQVIETS-----SHIFMVIEYCPG--GELLDHIVERQRLGEKESRAFFRQI 115
H ++ +LF V S + + +V E+ LD + E E F Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QL 129
Query: 116 LSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAA 175
L + +LH HRDLKP+N+L+ + +KL DFGL + L + + Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRA 187
Query: 176 PEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILN 222
PEV+ + Y + D+WS+G + + F S +DQL KIL+
Sbjct: 188 PEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKILD 233
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 104/254 (40%), Gaps = 65/254 (25%)
Query: 6 LRNQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
L +Y + T+G G F KV + H G VA+KI+K + R EI L+H++
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLN 69
Query: 65 -------------------HQHICKLFQVIETSSHIFMVIEYCPGGEL---LDHIVERQR 102
H HIC +F+++ S++ F+ G L LDHI
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIK----ENGFLPFRLDHI----- 120
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-------------------NQ 143
R QI +V +LH H DLKPEN+L + N
Sbjct: 121 ------RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP 174
Query: 144 NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC 203
++K++DFG + T + +Y APEVI + DVWS+G +L
Sbjct: 175 DIKVVDFGSATYD----DEHHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYL 229
Query: 204 GFLPFDS-DSIDQL 216
GF F + DS + L
Sbjct: 230 GFTVFPTHDSKEHL 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 15/249 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
VG G F +V TG + A+K ++ RV+ E+ A +S I L+ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVE-ELVACAGLSSPRIVPLYGAV 135
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ + +E GG L I + L E + + Q L + YLH H D+K +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 195
Query: 136 NVLLDRN-QNLKLIDFG--LCAKPEGGLESQLQTSC--GSPNYAAPEVIKGKQYYGSETD 190
NVLL + L DFG LC +P+G +S L G+ + APEV+ GK ++ D
Sbjct: 196 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVD 254
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM---SPNSRQIVRSMLQVEP 247
+WS M+ +L G P+ L KI + +P + Q ++ L+ EP
Sbjct: 255 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEP 314
Query: 248 GKRIKIQDL 256
R +L
Sbjct: 315 VHRASAMEL 323
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH 65
L N +++ R +G G F +V L H+ + A+K+++ + + K+E + LK I +
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR--NIKKYTRSAKIEADILKKIQN 90
Query: 66 QHICKLFQVIETSSHIF---MVIEYCPGGELLDHIVERQRLGE---KESRAFFRQILSAV 119
I V ++ M + + P G L I+ R ++ + + +IL A+
Sbjct: 91 DDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 120 AYLHHLGYAHRDLKPENVLLD-------------------------RNQNLKLIDFGLCA 154
YL + H DLKPEN+LLD ++ +KLIDFG CA
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG-CA 209
Query: 155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS 210
+ + + Y APEVI + S +D+WS G +L L G L F +
Sbjct: 210 TFKSDYHGSI---INTRQYRAPEVILNLGWDVS-SDMWSFGCVLAELYTGSLLFRT 261
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSM 189
Query: 195 GVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
G+ L + G P D+ ++ ++ + G E
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSM 189
Query: 195 GVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
G+ L + G P D+ ++ ++ + G E
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHI-------VERQRLGEKESRAFF 112
HI H ++ L MVI E+C G L ++ V + E + F
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 113 R---------QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 208 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 266
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 227 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 286
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 287 LDCWHGEPSQRPTFSELVEH 306
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+Y + + +G G F +V A + VA+K+++ + EI L+H+ Q
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHR--QAAEEIRILEHLRKQDK 155
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLD----HIVER---QRLGEKESRAFFRQILSAVAY 121
VI + C ELL ++++ Q R F IL +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 122 LHHLGYAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
LH H DLKPEN+LL + +K+IDFG + + +Q+ Y APEVI
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF----YRAPEVI 271
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGF--LPFDSDSIDQL 216
G + YG D+WS+G +L LL G+ LP D DQL
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLP-GEDEGDQL 308
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 195 GVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
G+ L + G P D+ ++ ++ + G E
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+Y + + +G G F +V A + VA+K+++ + EI L+H+ Q
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHR--QAAEEIRILEHLRKQDK 155
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLD----HIVER---QRLGEKESRAFFRQILSAVAY 121
VI + C ELL ++++ Q R F IL +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 122 LHHLGYAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
LH H DLKPEN+LL + +K+IDFG + + +Q S Y APEVI
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ----SRFYRAPEVI 271
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGF--LPFDSDSIDQL 216
G + YG D+WS+G +L LL G+ LP D DQL
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLP-GEDEGDQL 308
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G+G V +H +G +A K++ ++ E+ L + +I +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKP 134
+ I + +E+ GG L + + R+ E+ ++ + YL HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 135 ENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSM 194
N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y ++D+WSM
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSM 189
Query: 195 GVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
G+ L + G P D+ ++ ++ + G E
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 275
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 276 LDCWHGEPSQRPTFSELVEH 295
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 10/223 (4%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+ I E G+GG V +H +G +A K++ ++ E+ L + +I
Sbjct: 71 EKISELGAGNGGV--VFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GY 127
+ + I + +E+ GG L + + R+ E+ ++ + YL
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KP N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQGT-HYSV 244
Query: 188 ETDVWSMGVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
++D+WSMG+ L + G P D+ ++ ++ + G E
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 287
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 122
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 243 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 321
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 322 LDCWHGEPSQRPTFSELVEH 341
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 7 RNQYILERTVGSGGFAKVKLAT-----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R++ L + +G G F +V A T VA+K++K+ + + E+ L
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 62 HISHQ-HICKLFQVIETSSHIFMVI-EYCPGGELLDHIVERQR----------------L 103
HI H ++ L MVI E+C G L ++ ++ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 104 GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ 163
+ + Q+ + +L HRDL N+LL +K+ DFGL +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 164 LQTSCGSP-NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL 221
+ P + APE I + Y ++DVWS GV+L+ + G P+ ID+ + + L
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 222 --NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH 259
+ P + +P Q + EP +R +L+ H
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 412 QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKIL--NGKYTEPPWMSPNSRQIV 468
+ Y ++DVWS GV+L+ + G P+ ID+ + + L + P + +P Q +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 275
Query: 469 RSMLQVEPGKRIKIQDLLGH 488
EP +R +L+ H
Sbjct: 276 LDCWHGEPSQRPTFSELVEH 295
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 10/223 (4%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+ I E G+GG V +H +G +A K++ ++ E+ L + +I
Sbjct: 36 EKISELGAGNGGV--VFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GY 127
+ + I + +E+ GG L + + R+ E+ ++ + YL
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRD+KP N+L++ +KL DFG+ + ++S + G+ +Y +PE ++G +Y
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSV 209
Query: 188 ETDVWSMGVMLYALLCGFLPF---DSDSIDQLYDKILNGKYTE 227
++D+WSMG+ L + G P D+ ++ ++ + G E
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGG 159
Q L + + R + ++L A+ Y H G HRD+KP NV++D Q L+LID+GL
Sbjct: 132 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA 191
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 192 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQL 248
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 15/249 (6%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI 75
+G G F +V TG + A+K ++ RV+ E+ A +S I L+ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVE-ELVACAGLSSPRIVPLYGAV 133
Query: 76 ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPE 135
+ + +E GG L I + L E + + Q L + YLH H D+K +
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 193
Query: 136 NVLLDRN-QNLKLIDFG--LCAKPEGGLESQLQTSC--GSPNYAAPEVIKGKQYYGSETD 190
NVLL + L DFG LC +P+G +S L G+ + APEV+ GK ++ D
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVD 252
Query: 191 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM---SPNSRQIVRSMLQVEP 247
+WS M+ +L G P+ L KI + +P + Q ++ L+ EP
Sbjct: 253 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEP 312
Query: 248 GKRIKIQDL 256
R +L
Sbjct: 313 VHRASAMEL 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGG 159
Q L + + R + ++L A+ Y H G HRD+KP NV++D Q L+LID+GL
Sbjct: 127 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA 186
Query: 160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
E ++ + S + PE++ Q Y D+WS+G ML +++ PF D+ DQL
Sbjct: 187 QEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQL 243
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 103/254 (40%), Gaps = 65/254 (25%)
Query: 6 LRNQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
L +Y + T+G G F KV + H G VA+KI+K + R EI L+H++
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLN 69
Query: 65 -------------------HQHICKLFQVIETSSHIFMVIEYCPGGEL---LDHIVERQR 102
H HIC +F+++ S++ F+ G L LDHI
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIK----ENGFLPFRLDHI----- 120
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-------------------NQ 143
R QI +V +LH H DLKPEN+L + N
Sbjct: 121 ------RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP 174
Query: 144 NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC 203
++K++DFG + T +Y APEVI + DVWS+G +L
Sbjct: 175 DIKVVDFGSATYD----DEHHSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEYYL 229
Query: 204 GFLPFDS-DSIDQL 216
GF F + DS + L
Sbjct: 230 GFTVFPTHDSKEHL 243
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHI 68
+Y + + +G G F +V A + VA+K+++ + EI L+H+ Q
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHR--QAAEEIRILEHLRKQDK 155
Query: 69 CKLFQVIETSSHIFMVIEYCPGGELLD----HIVERQRLGEKE---SRAFFRQILSAVAY 121
VI + C ELL ++++ + R F IL +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 122 LHHLGYAHRDLKPENVLLDRN--QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI 179
LH H DLKPEN+LL + +K+IDFG + +Q+ Y APEVI
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF----YRAPEVI 271
Query: 180 KGKQYYGSETDVWSMGVMLYALLCGF--LPFDSDSIDQL 216
G + YG D+WS+G +L LL G+ LP D DQL
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLP-GEDEGDQL 308
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP----RVKLEINALKHISHQHICKL 71
+G G + V A +G VA+K ++ E LP R + L+ H ++ +L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 72 FQVIETSS-----HIFMVIEYCPGGELLDHIVERQRLG--EKESRAFFRQILSAVAYLHH 124
V TS + +V E+ +L ++ + G + + RQ L + +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLKPEN+L+ +KL DFGL + L + Y APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALDPVVVTLWYRAPEVLL-QST 187
Query: 185 YGSETDVWSMGVMLY------ALLCGFLPFDSDSIDQLYDKI------------------ 220
Y + D+WS+G + L CG ++D + +++D I
Sbjct: 188 YATPVDMWSVGCIFAEMFRRKPLFCGN--SEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 221 LNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 270
+ P P M + Q++ ML P KRI L H+++ E NP
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD-EGNP 299
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP----RVKLEINALKHISHQHICKL 71
+G G + V A +G VA+K ++ E LP R + L+ H ++ +L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 72 FQVIETSS-----HIFMVIEYCPGGELLDHIVERQRLG--EKESRAFFRQILSAVAYLHH 124
V TS + +V E+ +L ++ + G + + RQ L + +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLKPEN+L+ +KL DFGL + L + Y APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALAPVVVTLWYRAPEVLL-QST 187
Query: 185 YGSETDVWSMGVMLY------ALLCGFLPFDSDSIDQLYDKI------------------ 220
Y + D+WS+G + L CG ++D + +++D I
Sbjct: 188 YATPVDMWSVGCIFAEMFRRKPLFCGN--SEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 221 LNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 270
+ P P M + Q++ ML P KRI L H+++ E NP
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD-EGNP 299
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 20/261 (7%)
Query: 16 VGSGGFAKVKLATHVLTGEKVA-IKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV 74
+G G F V T +VA ++ + + R K E LK + H +I + +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 75 IETSSH----IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG--YA 128
E++ I +V E G L ++ + K R++ RQIL + +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 129 HRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGS 187
HRDLK +N+ + ++K+ D GL + G+P + APE + K Y
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV---IGTPEFXAPEXYEEK--YDE 208
Query: 188 ETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNGKYTEPPWMS----PNSRQIVRSM 242
DV++ G P+ + + Q+Y ++ +G +P P ++I+
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG--VKPASFDKVAIPEVKEIIEGC 266
Query: 243 LQVEPGKRIKIQDLLGHNWVK 263
++ +R I+DLL H + +
Sbjct: 267 IRQNKDERYSIKDLLNHAFFQ 287
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 50/292 (17%)
Query: 5 DLRNQYILE----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINAL 60
+++++Y E +GSG F V L G AIK KK G E NAL
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-----VDEQNAL 56
Query: 61 KHI-------SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRL----GEKESR 109
+ + H H+ + F H+ + EYC GG L D I E R+ E E +
Sbjct: 57 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 110 AFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-------------------NLKLIDF 150
Q+ + Y+H + H D+KP N+ + R K+ D
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 151 GLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGV-MLYALLCGFLPFD 209
G + S Q G + A EV++ + + D++++ + ++ A LP +
Sbjct: 177 GHVTRI-----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 231
Query: 210 SDSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN 260
D + +I G+ P +S ++++ M+ +P +R L+ H+
Sbjct: 232 GDQ----WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 6 LRNQYILE----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
++++Y E +GSG F V L G AIK KK G E NAL+
Sbjct: 1 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-----VDEQNALR 55
Query: 62 HI-------SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRL----GEKESRA 110
+ H H+ + F H+ + EYC GG L D I E R+ E E +
Sbjct: 56 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 115
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-------------------NLKLIDFG 151
Q+ + Y+H + H D+KP N+ + R K+ D G
Sbjct: 116 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 175
Query: 152 LCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGV-MLYALLCGFLPFDS 210
+ S Q G + A EV++ + + D++++ + ++ A LP +
Sbjct: 176 HVTRI-----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNG 230
Query: 211 DSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN 260
D + +I G+ P +S ++++ M+ +P +R L+ H+
Sbjct: 231 DQ----WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 277
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIK---IMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+G GGF V + VA+K M T E + EI + H+++ +L
Sbjct: 39 MGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIV-----------ERQRLGEKESRAFFRQILSAVAY 121
+ +V Y P G LLD + R ++ + + + + +
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--------NGINF 148
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIK 180
LH + HRD+K N+LLD K+ DFGL E ++ + + G+ Y APE ++
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR 208
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 216
G+ ++D++S GV+L ++ G D QL
Sbjct: 209 GE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQ 66
++ Y + R VG G +++V +V EK IKI+K + +K+ N +
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLM---GGP 86
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 201
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 4 IDLRNQYILE----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA 59
+ ++++Y E +GSG F V L G AIK KK G E NA
Sbjct: 3 MGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-----VDEQNA 57
Query: 60 LKHI-------SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRL----GEKES 108
L+ + H H+ + F H+ + EYC GG L D I E R+ E E
Sbjct: 58 LREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 109 RAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-------------------NLKLID 149
+ Q+ + Y+H + H D+KP N+ + R K+ D
Sbjct: 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 177
Query: 150 FGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGV-MLYALLCGFLPF 208
G + S Q G + A EV++ + + D++++ + ++ A LP
Sbjct: 178 LGHVTRI-----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232
Query: 209 DSDSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN 260
+ D + +I G+ P +S ++++ M+ +P +R L+ H+
Sbjct: 233 NGDQ----WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP----RVKLEINALKHISHQHICKL 71
+G G + V A +G VA+K ++ E LP R + L+ H ++ +L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 72 FQVIETSS-----HIFMVIEYCPGGELLDHIVERQRLG--EKESRAFFRQILSAVAYLHH 124
V TS + +V E+ +L ++ + G + + RQ L + +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 125 LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY 184
HRDLKPEN+L+ +KL DFGL + L + Y APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALFPVVVTLWYRAPEVLL-QST 187
Query: 185 YGSETDVWSMGVMLY------ALLCGFLPFDSDSIDQLYDKI------------------ 220
Y + D+WS+G + L CG ++D + +++D I
Sbjct: 188 YATPVDMWSVGCIFAEMFRRKPLFCGN--SEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 221 LNGKYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP 270
+ P P M + Q++ ML P KRI L H+++ E NP
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD-EGNP 299
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 6 LRNQYILE----RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
++++Y E +GSG F V L G AIK KK G E NAL+
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-----VDEQNALR 57
Query: 62 HI-------SHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRL----GEKESRA 110
+ H H+ + F H+ + EYC GG L D I E R+ E E +
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-------------------NLKLIDFG 151
Q+ + Y+H + H D+KP N+ + R K+ D G
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 177
Query: 152 LCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGV-MLYALLCGFLPFDS 210
+ S Q G + A EV++ + + D++++ + ++ A LP +
Sbjct: 178 HVTRI-----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 232
Query: 211 DSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN 260
D + +I G+ P +S ++++ M+ +P +R L+ H+
Sbjct: 233 DQ----WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 16 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 74
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ APE +K + S +D+WS GV+L+ + P+ S +Q+ +++G Y +
Sbjct: 195 PVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 229 PWMSPNS-RQIVRSMLQVEPGKR---IKIQDLL 257
P P ++R Q P R ++I +LL
Sbjct: 254 PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 7 RNQYILERTVGSGGFAKV---KLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKH 62
RN IL + +G G F V L T KVA+K MK + ++ E +K
Sbjct: 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD 92
Query: 63 ISHQHICKLFQV-IETSSH----IFMVIEYCPGGELLDHIV-ERQRLGEKES-----RAF 111
SH ++ +L V IE SS +++ + G+L +++ R G K F
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 112 FRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP-EGGLESQLQTSCGS 170
I + YL + + HRDL N +L + + + DFGL K G Q + +
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 229
+ A E + + Y S++DVW+ GV ++ + G P+ ++YD +L+G + P
Sbjct: 213 VKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP 271
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 410 SKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 458
+ + Y S++DVW+ GV ++ + G P+ ++YD +L+G + P
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP 271
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 37/282 (13%)
Query: 9 QYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGE-DLPRVKLEINALKH 62
Q+ L R +G G F V+ A L E KVA+K++K + D+ E +K
Sbjct: 24 QFTLGRMLGKGEFGSVREAQ--LKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE 81
Query: 63 ISHQHICKLFQVIETSSH-----IFMVI-EYCPGGELLDHIVERQRLGEKESR------- 109
H H+ KL V S I MVI + G+L ++ R+GE
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFNLPLQTLV 140
Query: 110 AFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG 169
F I + YL + HRDL N +L + + + DFGL K G + C
Sbjct: 141 RFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG--DYYRQGCA 198
Query: 170 SP---NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-K 224
S + A E + Y +DVW+ GV ++ ++ G P+ ++Y+ ++ G +
Sbjct: 199 SKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257
Query: 225 YTEPPWMSPNSRQIVRSMLQVEPGK-------RIKIQDLLGH 259
+PP ++ +P + R++++++LGH
Sbjct: 258 LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM 471
Y +DVW+ GV ++ ++ G P+ ++Y+ ++ G + +PP ++
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQC 275
Query: 472 LQVEPGK-------RIKIQDLLGH 488
+P + R++++++LGH
Sbjct: 276 WSADPKQRPSFTCLRMELENILGH 299
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 36/233 (15%)
Query: 6 LRNQYILERTVGSGGFAKV-KLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS 64
L+ +Y + T+G G F +V + H G +VA+KI+K ++ R LEIN L+ I+
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAAR--LEINVLEKIN 88
Query: 65 -----HQHIC-KLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE--KESRAFFRQIL 116
++++C ++F + H+ + E G D + + L + R Q+
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLC 147
Query: 117 SAVAYLHHLGYAHRDLKPENVL-----------LDRNQN--------LKLIDFGLCAKPE 157
AV +LH H DLKPEN+L L++ ++ ++++DFG
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFD- 206
Query: 158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS 210
T + +Y APEVI + + DVWS+G +++ GF F +
Sbjct: 207 ---HEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 201
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIK---IMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+G GGF V + VA+K M T E + EI + H+++ +L
Sbjct: 39 MGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIV-----------ERQRLGEKESRAFFRQILSAVAY 121
+ +V Y P G LLD + R ++ + + + + +
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--------NGINF 148
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIK 180
LH + HRD+K N+LLD K+ DFGL E ++ + G+ Y APE ++
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR 208
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 216
G+ ++D++S GV+L ++ G D QL
Sbjct: 209 GE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 16 VGSGGFAKVKLATHVL----TGEKVAIKIMKKATLGEDLPR-VKLEINALKHISHQHICK 70
+G G F V+L + TG VA+K ++ + G D R + EI LK + I K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVK 72
Query: 71 LFQVI--ETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGY 127
V + +V+EY P G L D + R RL + QI + YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 128 AHRDLKPENVLLDRNQNLKLIDFGLCAK--PEGGLESQLQTSCGSPNY-AAPEVIKGKQY 184
HRDL N+L++ ++K+ DFGL AK P ++ SP + APE +
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGL-AKLLPLDKDXXVVREPGQSPIFWYAPESLS-DNI 190
Query: 185 YGSETDVWSMGVMLYALL 202
+ ++DVWS GV+LY L
Sbjct: 191 FSRQSDVWSFGVVLYELF 208
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 201
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 144
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 202
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 201
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN-ALKHISHQHICKLFQV 74
+G G + V+ HV +G+ +A+K ++ ++ R+ ++++ +++ + +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 75 IETSSHIFMVIEYCPGG--ELLDHIVER-QRLGEKESRAFFRQILSAVAYLH-HLGYAHR 130
+ +++ +E + ++++ Q + E I+ A+ +LH L HR
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK---GKQYYGS 187
D+KP NVL++ +K+ DFG+ + + C Y APE I ++ Y
Sbjct: 179 DVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPERINPELNQKGYSV 236
Query: 188 ETDVWSMGVMLYALLCGFLPFDS 210
++D+WS+G+ + L P+DS
Sbjct: 237 KSDIWSLGITMIELAILRFPYDS 259
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 201
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 144
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 202
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 129
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 130 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKP-EGGLESQLQTSCGS 170
I YL + HRD+ N LL + K+ DFG+ G + +
Sbjct: 190 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 229
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP
Sbjct: 250 VKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP 308
Query: 230 WMSPNSRQIVRSMLQ 244
P + R M Q
Sbjct: 309 KNCPGP--VYRIMTQ 321
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 320
Query: 473 Q 473
Q
Sbjct: 321 Q 321
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 301
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEIN-ALKHISHQHICKLFQV 74
+G G + V+ HV +G+ +A+K ++ ++ R+ ++++ +++ + +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 75 IETSSHIFMVIEYCPGG--ELLDHIVER-QRLGEKESRAFFRQILSAVAYLH-HLGYAHR 130
+ +++ +E + ++++ Q + E I+ A+ +LH L HR
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 131 DLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK---GKQYYGS 187
D+KP NVL++ +K+ DFG+ + + C Y APE I ++ Y
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPERINPELNQKGYSV 192
Query: 188 ETDVWSMGVMLYALLCGFLPFDS 210
++D+WS+G+ + L P+DS
Sbjct: 193 KSDIWSLGITMIELAILRFPYDS 215
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLE 161
L + + R + ++L A+ Y H G HRD+KP NV++D + L+LID+GL G E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
++ + S + PE++ Q Y D+WS+G M ++ PF D+ DQL
Sbjct: 182 YNVRVA--SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 47 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 106
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 107 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKP-EGGLESQLQTSCGS 170
I YL + HRD+ N LL + K+ DFG+ G + +
Sbjct: 167 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPP 229
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP
Sbjct: 227 VKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP 285
Query: 230 WMSPNSRQIVRSMLQ 244
P + R M Q
Sbjct: 286 KNCPGP--VYRIMTQ 298
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 297
Query: 473 Q 473
Q
Sbjct: 298 Q 298
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 278
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 13 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 71
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 72 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E +
Sbjct: 132 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 191
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ APE +K + + +D+WS GV+L+ + P+ S +Q+ +++G Y +
Sbjct: 192 PVRWMAPESLK-DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 250
Query: 229 PWMSPNS-RQIVRSMLQVEPGKR---IKIQDLL 257
P P ++R Q P R ++I +LL
Sbjct: 251 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 67 HICKLFQVI--ETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH 124
+I KL ++ + S ++ EY D V L + + R + ++L A+ Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNN---TDFKVLYPTLTDYDIRYYIYELLKALDYCHS 164
Query: 125 LGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ 183
G HRD+KP NV++D + L+LID+GL G E ++ + S + PE++ Q
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPELLVDLQ 222
Query: 184 YYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
Y D+WS+G M ++ PF D+ DQL
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 257
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 103 LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLE 161
L + + R + ++L A+ Y H G HRD+KP NV++D + L+LID+GL G E
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 183
Query: 162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF--DSDSIDQL 216
++ + S + PE++ Q Y D+WS+G M ++ PF D+ DQL
Sbjct: 184 YNVRVA--SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 238
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 16 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 74
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK-PEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ APE +K + + +D+WS GV+L+ + P+ S +Q+ +++G Y +
Sbjct: 195 PVRWMAPESLK-DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 229 PWMSPNS-RQIVRSMLQVEPGKR---IKIQDLL 257
P P ++R Q P R ++I +LL
Sbjct: 254 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 29/264 (10%)
Query: 8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIM------KKATLGEDLPRVKLEINALK 61
N+ E+ +G GGF V V VAIK + + + E + E+ +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQR-LGEKESRAFFRQILSAVA 120
+++H +I KL+ ++ MV+E+ P G+L ++++ + I +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 121 YLHHLG--YAHRDLKPENVLL---DRNQNL--KLIDFGLCAKPEGGLESQLQTSCGSPNY 173
Y+ + HRDL+ N+ L D N + K+ DFGL + + L G+ +
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL----GNFQW 192
Query: 174 AAPEVIKGKQ-YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG------KYT 226
APE I ++ Y + D +S ++LY +L G PFD S ++ K +N + T
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEGLRPT 250
Query: 227 EPPWMSPNSRQIVRSMLQVEPGKR 250
P P R ++ +P KR
Sbjct: 251 IPEDCPPRLRNVIELCWSGDPKKR 274
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 409 SSKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG------KYTEPPWMSP 462
+ ++ Y + D +S ++LY +L G PFD S ++ K +N + T P P
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPP 257
Query: 463 NSRQIVRSMLQVEPGKR 479
R ++ +P KR
Sbjct: 258 RLRNVIELCWSGDPKKR 274
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 16 VGSGGFAKVKLATHVLTGEKVAIK---IMKKATLGEDLPRVKLEINALKHISHQHICKLF 72
+G GGF V + VA+K M T E + EI + H+++ +L
Sbjct: 33 MGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 73 QVIETSSHIFMVIEYCPGGELLDHIV-----------ERQRLGEKESRAFFRQILSAVAY 121
+ +V Y P G LLD + R ++ + + + + +
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--------NGINF 142
Query: 122 LHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS-CGSPNYAAPEVIK 180
LH + HRD+K N+LLD K+ DFGL E + + G+ Y APE ++
Sbjct: 143 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR 202
Query: 181 GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL 216
G+ ++D++S GV+L ++ G D QL
Sbjct: 203 GE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
++HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 90 KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 208
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 209 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 267
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 268 PKNCPGP--VYRIMTQ 281
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 280
Query: 473 Q 473
Q
Sbjct: 281 Q 281
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 16 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 74
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP-EGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL 194
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ APE +K + S +D+WS GV+L+ + P+ S +Q+ +++G Y +
Sbjct: 195 PVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 229 PWMSPNS-RQIVRSMLQVEPGKR---IKIQDLL 257
P P ++R Q P R ++I +LL
Sbjct: 254 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 103
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
++HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 104 KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 222
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 223 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 282 PKNCPGP--VYRIMTQ 295
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 294
Query: 473 Q 473
Q
Sbjct: 295 Q 295
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 21 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 80
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 81 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 141 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 199
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 200 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 258
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 259 PKNCPGP--VYRIMTQ 272
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 271
Query: 473 Q 473
Q
Sbjct: 272 Q 272
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 252
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 16 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 74
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS 170
+I +AYL+ + HRDL N ++ + +K+ DFG+ E+ G
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI---YETDYYRKGGK 191
Query: 171 P----NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 225
+ APE +K + S +D+WS GV+L+ + P+ S +Q+ +++G Y
Sbjct: 192 GLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 226 TEPPWMSPNS-RQIVRSMLQVEPGKR---IKIQDLL 257
+ P P ++R Q P R ++I +LL
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 36 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 95
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 96 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 156 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 214
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 215 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 273
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 274 PKNCPGP--VYRIMTQ 287
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 286
Query: 473 Q 473
Q
Sbjct: 287 Q 287
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 46 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 105
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 106 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 166 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 224
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 225 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 283
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 284 PKNCPGP--VYRIMTQ 297
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 296
Query: 473 Q 473
Q
Sbjct: 297 Q 297
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 277
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 90 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 208
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 209 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 267
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 268 PKNCPGP--VYRIMTQ 281
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 280
Query: 473 Q 473
Q
Sbjct: 281 Q 281
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 29/304 (9%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALK 61
R + + R +G G F V +A V+ E +VAIK + +A + E + +K
Sbjct: 17 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 76
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-------- 113
+ H+ +L V+ +++E G+L ++ R E E+
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMI 134
Query: 114 ----QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E+ G
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRKGG 191
Query: 170 SP----NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
+ +PE +K + + +DVWS GV+L+ + P+ S +Q+ ++ G
Sbjct: 192 KGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 250
Query: 225 YTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKD 283
+ P P+ +++R Q P R +++ +M P VSF E + ++
Sbjct: 251 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKMEN 310
Query: 284 DDVI 287
+ V+
Sbjct: 311 NPVL 314
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 88
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 89 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 207
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 208 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 266
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 267 PKNCPGP--VYRIMTQ 280
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 279
Query: 473 Q 473
Q
Sbjct: 280 Q 280
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 18/254 (7%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 90 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP 171
I YL + HRD+ N LL + K+ DFG+ + P
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPW 230
P + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Query: 231 MSPNSRQIVRSMLQ 244
P + R M Q
Sbjct: 270 NCPGP--VYRIMTQ 281
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 280
Query: 473 Q 473
Q
Sbjct: 281 Q 281
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIK-IMKKATLGEDLPRVKLEINAL 60
R + L R +G G F V A ++ GE +VA+K + + A+L E + + E + +
Sbjct: 15 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-EASVM 73
Query: 61 KHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGE----------KESRA 110
K + H+ +L V+ +V+E G+L ++ + E +E
Sbjct: 74 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 133
Query: 111 FFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS 170
+I +AYL+ + HRDL N ++ + +K+ DFG+ E+ G
Sbjct: 134 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI---YETDYYRKGGK 190
Query: 171 P----NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY 225
+ APE +K + + +D+WS GV+L+ + P+ S +Q+ +++G Y
Sbjct: 191 GLLPVRWMAPESLK-DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 249
Query: 226 TEPPWMSPNS-RQIVRSMLQVEPGKR---IKIQDLLGHNWVKMGPEDNPVSF 273
+ P P ++R Q P R ++I +LL + PE VSF
Sbjct: 250 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE---VSF 298
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 88
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 89 KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 207
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 208 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 266
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 267 PKNCPGP--VYRIMTQ 280
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 279
Query: 473 Q 473
Q
Sbjct: 280 Q 280
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 103
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 104 KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 222
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 223 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 282 PKNCPGP--VYRIMTQ 295
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 294
Query: 473 Q 473
Q
Sbjct: 295 Q 295
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEIN 58
Y+D + + ++ +GSG F VK + + + + D P +K E N
Sbjct: 22 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEAN 80
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++ + + +I ++ + E S + +V+E G L ++ + + + +K Q+
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 139
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQTSCGSP-NYAA 175
+ YL + HRDL NVLL K+ DFGL +K E+ + QT P + A
Sbjct: 140 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYA 198
Query: 176 PEVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPF 208
PE I + + S++DVWS GV+++ A G P+
Sbjct: 199 PECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 56 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 115
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 116 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLLD---RNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 176 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 234
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 235 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 293
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 294 PKNCPGP--VYRIMTQ 307
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 306
Query: 473 Q 473
Q
Sbjct: 307 Q 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 287
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEIN 58
Y+D + + ++ +GSG F VK + + + + D P +K E N
Sbjct: 22 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEAN 80
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++ + + +I ++ + E S + +V+E G L ++ + + + +K Q+
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 139
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQTSCGSP-NYAA 175
+ YL + HRDL NVLL K+ DFGL +K E+ + QT P + A
Sbjct: 140 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYA 198
Query: 176 PEVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPF 208
PE I + + S++DVWS GV+++ A G P+
Sbjct: 199 PECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 29/290 (10%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALK 61
R + + R +G G F V +A V+ E +VAIK + +A + E + +K
Sbjct: 18 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 77
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-------- 113
+ H+ +L V+ +++E G+L ++ R E E+
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMI 135
Query: 114 ----QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E+ G
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---XETDXXRKGG 192
Query: 170 SP----NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
+ +PE +K + + +DVWS GV+L+ + P+ S +Q+ ++ G
Sbjct: 193 KGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 225 YTEPPWMSPNSR-QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSF 273
+ P P+ +++R Q P R +++ +M P VSF
Sbjct: 252 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEIN 58
Y+D + + ++ +GSG F VK + + + + D P +K E N
Sbjct: 6 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEAN 64
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++ + + +I ++ + E S + +V+E G L ++ + + + +K Q+
Sbjct: 65 VMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 123
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-QLQTSCGSP-NYAAP 176
+ YL + HRDL NVLL K+ DFGL + QT P + AP
Sbjct: 124 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 177 EVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPF 208
E I + + S++DVWS GV+++ A G P+
Sbjct: 184 ECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 29/290 (10%)
Query: 7 RNQYILERTVGSGGFAKV--KLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALK 61
R + + R +G G F V +A V+ E +VAIK + +A + E + +K
Sbjct: 9 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 68
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFR-------- 113
+ H+ +L V+ +++E G+L ++ R E E+
Sbjct: 69 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMI 126
Query: 114 ----QILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG 169
+I +AYL+ + HRDL N ++ + +K+ DFG+ E+ G
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---XETDXXRKGG 183
Query: 170 SP----NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK 224
+ +PE +K + + +DVWS GV+L+ + P+ S +Q+ ++ G
Sbjct: 184 KGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 242
Query: 225 YTEPPWMSPNS-RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSF 273
+ P P+ +++R Q P R +++ +M P VSF
Sbjct: 243 LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 292
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 36 VAIKIMKKATLGED---LPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGE 92
VA+K+ + TL D R + E + H+ + E +++ G +
Sbjct: 62 VALKLXSE-TLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVD 120
Query: 93 LLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL 152
L + + L + A RQI SA+ H G HRD+KPEN+L+ + L+DFG+
Sbjct: 121 LAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI 180
Query: 153 CAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS 212
+ +QL + G+ Y APE + + D++++ +LY L G P+ D
Sbjct: 181 ASATTDEKLTQLGNTVGTLYYXAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
Query: 213 I 213
+
Sbjct: 240 L 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEIN 58
Y+D + + ++ +GSG F VK + + + + D P +K E N
Sbjct: 2 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEAN 60
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++ + + +I ++ + E S + +V+E G L ++ + + + +K Q+
Sbjct: 61 VMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 119
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQTSCGSP-NYAA 175
+ YL + HRDL NVLL K+ DFGL +K E+ + QT P + A
Sbjct: 120 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYA 178
Query: 176 PEVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPF 208
PE I + + S++DVWS GV+++ A G P+
Sbjct: 179 PECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 7 RNQYILERTVGSGGFA-----KVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK 61
R L R +G G F +V + + +VA+K + + +D +E +
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIIS 103
Query: 62 HISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFF------RQ 114
+HQ+I + V S F+++E GG+L + E R R + S A R
Sbjct: 104 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 115 ILSAVAYLHHLGYAHRDLKPENVLL---DRNQNLKLIDFGLCAKPEGGLESQLQTSCG-- 169
I YL + HRD+ N LL + K+ DFG+ A+ + C
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRASYYRKGGCAML 222
Query: 170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEP 228
+ PE + + S+TD WS GV+L+ + G++P+ S S ++ + + +G +P
Sbjct: 223 PVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 229 PWMSPNSRQIVRSMLQ 244
P P + R M Q
Sbjct: 282 PKNCPGP--VYRIMTQ 295
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 414 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML 472
+ S+TD WS GV+L+ + G++P+ S S ++ + + +G +PP P + R M
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP--VYRIMT 294
Query: 473 Q 473
Q
Sbjct: 295 Q 295
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 331 YGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILS 368
+ S+TD WS GV+L+ + G++P+ S S ++ + + S
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 37/289 (12%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDL---------PRVKL 55
+++ Y ++R + SG + V G VAIK + + G + RV
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 56 EINALKHISHQHICKLFQVI----ETSSH-IFMVIEYCPGGELLDHIVERQRL--GEKES 108
EI L H H +I L + E + H +++V E L ++ QR+ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHI 136
Query: 109 RAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC 168
+ F IL + LH G HRDL P N+LL N ++ + DF L E ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYV 194
Query: 169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP 228
Y APE++ + + D+WS G ++ + F + +KI+ T
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 229 -----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ SP++R +R+ L P + W + P +PV+
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPAR----------AWTAVVPTADPVA 293
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 37/289 (12%)
Query: 6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIK-IMKKATLGEDL---------PRVKL 55
+++ Y ++R + SG + V G VAIK + + G + RV
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 56 EINALKHISHQHICKLFQVI----ETSSH-IFMVIEYCPGGELLDHIVERQRL--GEKES 108
EI L H H +I L + E + H +++V E L ++ QR+ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHI 136
Query: 109 RAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC 168
+ F IL + LH G HRDL P N+LL N ++ + DF L E ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYV 194
Query: 169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP 228
Y APE++ + + D+WS G ++ + F + +KI+ T
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 229 -----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVS 272
+ SP++R +R+ L P + W + P +PV+
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPAR----------AWTAVVPTADPVA 293
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK----LEIN 58
Y+D + + ++ +GSG F VK + + + + D P +K E N
Sbjct: 20 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEAN 78
Query: 59 ALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSA 118
++ + + +I ++ + E S + +V+E G L ++ + + + +K Q+
Sbjct: 79 VMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 137
Query: 119 VAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQTSCGSP-NYAA 175
+ YL + HRDL NVLL K+ DFGL +K E+ + QT P + A
Sbjct: 138 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYA 196
Query: 176 PEVIKGKQYYGSETDVWSMGVMLY-ALLCGFLPF 208
PE I + + S++DVWS GV+++ A G P+
Sbjct: 197 PECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,495,871
Number of Sequences: 62578
Number of extensions: 808782
Number of successful extensions: 7238
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1549
Number of HSP's gapped (non-prelim): 3241
length of query: 568
length of database: 14,973,337
effective HSP length: 104
effective length of query: 464
effective length of database: 8,465,225
effective search space: 3927864400
effective search space used: 3927864400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)